F289595

General Info

Members Datasets Scaffolds Average Seq Length
188 123 188 575

Family's Representative Sequence

Representative Sequence 3300031241|Ga0265325_10016694|Ga0265325_100166943
Length 613
Sequence MTSSQNEIASRHDPSRRASFLLDTIAETARLTRVTAILGLNAYHGDAAAALVIDGELVAAAEEERFNRVKHVAGFPALAAAWCLAEGGIAPEKLDHLAVSRDPRANVGQKLLRTIRHGASARYLKARLQNAAKIRDVKTALADSLDIDRDVLQAQVHNVEHHQAHVASAFFVSPFDDAAILSIDGFGDFCSTMTAVGHGNSFRVLDRVLFPHSLGIFYAALTQWLGFPKYGDEGKVMGLAPYGDPERYLKAMRNIVLTDGDLFTLDLDYFTHDKEGVDMTWDEGSPTIGRIYSDKLVETLGPARQPQAEMTSHYEDVAAAMQKRLEEVYLHIVGSLHESTGMTDLCLAGGVALNAVANGRIRPETGFDGLYIQPAAGDSGTAVGAAYYVWNQELEQPRSFVMTHAYTGPQYSDGEIETAVRTAGLTAKRLDDDALFPAVAERIAAGDVVGWFQGRMEFGPRALGHRSIVADPRRSDMKDILNARIKHREPFRPFAPSILADATGEWFDQDYTSPFMVLVYTTKPDKRDKIPAVNHIDDTGRLQTVERDVSPRYYRLIEEFGKLTNVPVVLNTSFNENEPIVRTPAEAVDTFLKTHMDTLVLGNYVVTRNGSST

Samples

Sample ID Description Type Environment
1 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
2 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
3 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
4 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
5 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
6 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
7 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
8 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
9 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
10 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
11 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
12 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
13 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
14 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
15 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
16 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
17 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
18 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
19 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
20 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
21 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
22 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
23 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
24 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
25 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
26 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
27 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
28 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
29 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
30 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
31 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
32 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
33 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
34 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
35 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
48 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
49 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
50 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
51 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
52 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
53 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
54 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
55 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
56 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
57 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
58 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
59 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
60 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
61 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
62 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
63 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
64 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
65 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
66 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
67 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
68 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
69 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
70 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
71 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
72 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
73 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
74 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
75 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
76 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
77 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
78 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
79 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
80 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
81 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
82 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
83 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
84 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
85 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
86 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
87 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
88 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
89 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
90 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
91 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
92 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
93 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
94 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
95 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
96 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
97 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
98 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
99 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
100 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
101 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
102 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
103 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
104 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
105 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
106 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
107 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
108 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
109 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
110 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
111 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
112 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
113 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
114 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
115 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
116 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
117 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
118 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
119 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
120 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
121 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
122 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
123 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.53
Nodule 0
Rhizoplane 8.51
Rhizosphere 87.77
Stem 0
Stem Tuber 0
Unclassified 3.19

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootL2_10122128 3300003322 Bacteria 3565
2 Ga0065704_10079674 3300005289 Bacteria 4104
3 Ga0070689_100000005 3300005340 Bacteria 396551
4 Ga0070674_100111649 3300005356 Bacteria 2008
5 Ga0070688_100022222 3300005365 Bacteria 3713
6 Ga0070714_100000049 3300005435 Bacteria 111102
7 Ga0070714_100000058 3300005435 Bacteria 101916
8 Ga0070714_100000665 3300005435 Bacteria 24338
9 Ga0070714_100057640 3300005435 Bacteria 3326
10 Ga0070714_100084203 3300005435 Bacteria 2774
11 Ga0070713_100011123 3300005436 Bacteria 6538
12 Ga0070678_100068177 3300005456 Bacteria 2651
13 Ga0070681_10005148 3300005458 Bacteria 12611
14 Ga0070707_100127758 3300005468 Unclassified 2470
15 Ga0070679_100006178 3300005530 Bacteria 11148
16 Ga0070697_100000017 3300005536 Bacteria 141440
17 Ga0070697_100001874 3300005536 Bacteria 16065
18 Ga0068855_100012248 3300005563 Bacteria 10365
19 Ga0068859_100122581 3300005617 Bacteria 2666
20 Ga0081539_10000388 3300005985 Bacteria 95218
21 Ga0070717_10003939 3300006028 Bacteria 10684
22 Ga0070716_100081132 3300006173 Bacteria 1936
23 Ga0075428_100006543 3300006844 Bacteria 12952
24 Ga0075430_100022474 3300006846 Bacteria 5368
25 Ga0075431_100032527 3300006847 Bacteria 5374
26 Ga0075434_100000564 3300006871 Bacteria 28515
27 Ga0097620_100122588 3300006931 Bacteria 2666
28 Ga0105240_10008052 3300009093 Bacteria 15167
29 Ga0105240_10084017 3300009093 Bacteria 3905
30 Ga0111539_10054040 3300009094 Bacteria 4780
31 Ga0105245_10010296 3300009098 Bacteria 8144
32 Ga0114129_10030822 3300009147 Bacteria 7585
33 Ga0105243_10054075 3300009148 Bacteria 3186
34 Ga0105248_10051422 3300009177 Bacteria 4623
35 Ga0157374_10086462 3300013296 Unclassified 2983
36 Ga0157378_10001056 3300013297 Bacteria 25231
37 Ga0163162_10079653 3300013306 Bacteria 3342
38 Ga0163162_10102480 3300013306 Bacteria 2956
39 Ga0182008_10003382 3300014497 Bacteria 9674
40 Ga0182007_10012329 3300015262 Bacteria 3291
41 Ga0213876_10011100 3300021384 Bacteria 4819
42 Ga0207699_10012301 3300025906 Bacteria 4351
43 Ga0207707_10020685 3300025912 Bacteria 5747
44 Ga0207695_10060429 3300025913 Bacteria 3923
45 Ga0207652_10041429 3300025921 Bacteria 3915
46 Ga0207646_10040093 3300025922 Bacteria 4213
47 Ga0207700_10000001 3300025928 Bacteria 1122509
48 Ga0207700_10042342 3300025928 Bacteria 3338
49 Ga0207664_10000080 3300025929 Bacteria 96091
50 Ga0207664_10000238 3300025929 Bacteria 41749
51 Ga0207664_10036054 3300025929 Bacteria 3821
52 Ga0207670_10000004 3300025936 Bacteria 707262
53 Ga0207665_10048773 3300025939 Bacteria 2844
54 Ga0207667_10034198 3300025949 Bacteria 5460
55 Ga0207640_10059279 3300025981 Bacteria 2526
56 Ga0207676_10119306 3300026095 Bacteria 2221
57 Ga0265319_1000155 3300028563 Bacteria 51380
58 Ga0265319_1003213 3300028563 Bacteria 8596
59 Ga0265318_10000042 3300028577 Bacteria 130384
60 Ga0265318_10000123 3300028577 Bacteria 71866
61 Ga0265318_10025539 3300028577 Bacteria 2332
62 Ga0265338_10001510 3300028800 Bacteria 37660
63 Ga0265338_10007652 3300028800 Bacteria 13329
64 Ga0265338_10119163 3300028800 Bacteria 2108
65 Ga0265330_10000026 3300031235 Bacteria 140332
66 Ga0265328_10003259 3300031239 Bacteria 7191
67 Ga0265328_10030320 3300031239 Bacteria 2015
68 Ga0265320_10000016 3300031240 Bacteria 197556
69 Ga0265320_10001593 3300031240 Bacteria 16270
70 Ga0265325_10007699 3300031241 Bacteria 6425
71 Ga0265325_10012798 3300031241 Bacteria 4788
72 Ga0265325_10016694 3300031241 Bacteria 4098
73 Ga0265329_10002583 3300031242 Bacteria 8174
74 Ga0265329_10004542 3300031242 Bacteria 5751
75 Ga0265339_10002389 3300031249 Bacteria 13476
76 Ga0265339_10004324 3300031249 Bacteria 9711
77 Ga0265331_10000010 3300031250 Bacteria 312076
78 Ga0265331_10000047 3300031250 Bacteria 183230
79 Ga0265331_10006024 3300031250 Bacteria 7225
80 Ga0265316_10000204 3300031344 Bacteria 69064
81 Ga0265316_10005114 3300031344 Bacteria 12857
82 Ga0265316_10005534 3300031344 Bacteria 12252
83 Ga0265316_10024520 3300031344 Bacteria 5051
84 Ga0265313_10001103 3300031595 Bacteria 25853
85 Ga0265313_10001750 3300031595 Bacteria 19954
86 Ga0265313_10013158 3300031595 Bacteria 4987
87 Ga0265314_10000035 3300031711 Bacteria 240629
88 Ga0265314_10008533 3300031711 Bacteria 8760
89 Ga0265314_10018297 3300031711 Bacteria 5466
90 Ga0265342_10000027 3300031712 Bacteria 158835
91 Ga0265342_10000158 3300031712 Bacteria 76866
92 Ga0265342_10016700 3300031712 Bacteria 4789
93 Ga0316577_10003301 3300031733 Bacteria 8131
94 Ga0307416_100025360 3300032002 Bacteria 4345
95 Ga0373954_0016581 3300035118 Bacteria 3300
96 Ga0373935_0004517 3300035692 Bacteria 8180
97 Ga0395898_0079919 3300037466 Bacteria 3154
98 Ga0395905_0048866 3300037471 Bacteria 3963
99 Ga0395901_0107528 3300038443 Bacteria 2928
100 Ga0400485_01843 3300038735 Bacteria 6949
101 Ga0400486_25513 3300038742 Bacteria 9779
102 Ga0436365_0699528 3300039437 Bacteria 3645
103 Ga0436365_1924551 3300039437 Bacteria 12999
104 Ga0466963_0044855 3300044694 Bacteria 2910
105 Ga0466958_0000705 3300045836 Bacteria 14590
106 Ga0466967_0037450 3300045976 Bacteria 4151
107 Ga0466967_0101344 3300045976 Bacteria 2632
108 Ga0466967_0178084 3300045976 Bacteria 2004
109 Ga0495592_0010257 3300046454 Bacteria 7063
110 Ga0495629_0013949 3300046459 Bacteria 5793
111 Ga0495651_0000075 3300046462 Bacteria 73020
112 Ga0495653_0023682 3300046463 Bacteria 4956
113 Ga0495608_0009569 3300046511 Bacteria 6768
114 Ga0495608_0020826 3300046511 Bacteria 4505
115 Ga0495608_0021771 3300046511 Unclassified 4398
116 Ga0495618_0017758 3300046514 Unclassified 4366
117 Ga0495628_0000971 3300046516 Bacteria 26212
118 Ga0495628_0006530 3300046516 Bacteria 10177
119 Ga0495630_0004440 3300046517 Bacteria 9842
120 Ga0495630_0004587 3300046517 Bacteria 9686
121 Ga0495630_0005768 3300046517 Bacteria 8752
122 Ga0495630_0055660 3300046517 Unclassified 2964
123 Ga0495630_0100760 3300046517 Bacteria 2185
124 Ga0495652_0004932 3300046529 Bacteria 12652
125 Ga0495652_0029939 3300046529 Unclassified 4777
126 Ga0495586_0003319 3300046535 Bacteria 8634
127 Ga0495587_0000619 3300046536 Bacteria 24148
128 Ga0495667_0006207 3300046559 Bacteria 8097
129 Ga0495667_0008865 3300046559 Bacteria 6840
130 Ga0495667_0028459 3300046559 Bacteria 3763
131 Ga0495656_0008035 3300046615 Bacteria 3755
132 Ga0495657_0000981 3300046675 Bacteria 25136
133 Ga0495657_0005465 3300046675 Bacteria 10059
134 Ga0495599_0012986 3300046678 Bacteria 5141
135 Ga0495623_0011636 3300046679 Bacteria 5699
136 Ga0495613_0000258 3300046689 Bacteria 49962
137 Ga0495613_0120615 3300046689 Unclassified 1883
138 Ga0495600_0000068 3300046809 Bacteria 59144
139 Ga0495604_0000278 3300047317 Bacteria 45825
140 Ga0495604_0010093 3300047317 Bacteria 7479
141 Ga0495604_0043117 3300047317 Bacteria 3533
142 Ga0495674_0035044 3300047319 Bacteria 4531
143 Ga0495674_0068688 3300047319 Unclassified 3066
144 Ga0495680_0000479 3300047322 Bacteria 44993
145 Ga0495680_0009534 3300047322 Bacteria 8725
146 Ga0495680_0077372 3300047322 Unclassified 2520
147 Ga0495675_0003540 3300047444 Bacteria 9411
148 Ga0495675_0004150 3300047444 Bacteria 8769
149 Ga0495684_0001174 3300047471 Bacteria 21111
150 Ga0495684_0001435 3300047471 Bacteria 19121
151 Ga0495684_0004364 3300047471 Bacteria 11047
152 Ga0495593_0004632 3300047673 Bacteria 8173
153 Ga0495602_0018676 3300048088 Bacteria 6912
154 Ga0496101_0020329 3300048904 Bacteria 4542
155 Ga0496104_0000467 3300048907 Bacteria 34852
156 Ga0496105_0006031 3300048908 Bacteria 9266
157 Ga0496105_0093486 3300048908 Bacteria 2483
158 Ga0496109_0001489 3300048912 Bacteria 19459
159 Ga0496109_0062211 3300048912 Bacteria 3413
160 Ga0496109_0119794 3300048912 Bacteria 2451
161 Ga0496110_0000642 3300048913 Bacteria 23961
162 Ga0496111_0000034 3300048914 Bacteria 54519
163 Ga0496111_0082875 3300048914 Bacteria 2343
164 Ga0496112_0001830 3300048915 Bacteria 16726
165 Ga0496112_0011071 3300048915 Bacteria 8219
166 Ga0496112_0053952 3300048915 Bacteria 3949
167 Ga0496114_0006811 3300048917 Bacteria 9001
168 Ga0496114_0054353 3300048917 Bacteria 3339
169 Ga0496114_0087993 3300048917 Bacteria 2634
170 Ga0501031_0000159 3300049568 Bacteria 38575
171 Ga0501032_0001680 3300049569 Bacteria 17552
172 Ga0501034_0022212 3300049571 Bacteria 6466
173 Ga0501034_0153464 3300049571 Bacteria 2278
174 Ga0501043_0002171 3300049579 Bacteria 16742
175 Ga0501046_0097817 3300049580 Bacteria 2254
176 Ga0501047_0000334 3300049581 Bacteria 53965
177 Ga0501069_0012917 3300049585 Bacteria 4448
178 Ga0501070_0002493 3300049586 Bacteria 16126
179 Ga0501035_0000502 3300049822 Bacteria 44110
180 Ga0501044_0000360 3300049823 Bacteria 56980
181 nmdc:mga09592_76569_c1 3300050508 Unclassified 2845
182 nmdc:mga06r32_55306_c1 3300050510 Bacteria 3806
183 nmdc:mga0n895_325_c1 3300050512 Bacteria 30724
184 nmdc:mga0a205_10201_c2 3300050515 Bacteria 6208
185 Ga0495619_0004927 3300053085 Bacteria 8477
186 Ga0495619_0125773 3300053085 Bacteria 1759
187 Ga0500616_0010781 3300053153 Bacteria 5448
188 Ga0501082_0025593 3300060353 Bacteria 5085

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300053085 Ga0495619_0125773 Ga0495619_0125773_280_1743 481
2 3300046454 Ga0495592_0010257 Ga0495592_0010257_26_1552 490
3 3300046689 Ga0495613_0120615 Ga0495613_0120615_27_1541 490
4 3300046459 Ga0495629_0013949 Ga0495629_0013949_3978_5543 498
5 3300046809 Ga0495600_0000068 Ga0495600_0000068_48139_49704 498
6 3300009147 Ga0114129_10030822 Ga0114129_100308222 500
7 3300050508 nmdc:mga09592_76569_c1 nmdc:mga09592_76569_c1_548_2179 500
8 3300049568 Ga0501031_0000159 Ga0501031_0000159_16288_17904 507
9 3300049569 Ga0501032_0001680 Ga0501032_0001680_7679_9295 507
10 3300049571 Ga0501034_0022212 Ga0501034_0022212_4118_5734 507
11 3300049579 Ga0501043_0002171 Ga0501043_0002171_14967_16583 507
12 3300049580 Ga0501046_0097817 Ga0501046_0097817_350_1966 507
13 3300049581 Ga0501047_0000334 Ga0501047_0000334_16310_17926 507
14 3300049822 Ga0501035_0000502 Ga0501035_0000502_16308_17924 507
15 3300049823 Ga0501044_0000360 Ga0501044_0000360_39055_40671 507
16 3300005468 Ga0070707_100127758 Ga0070707_1001277581 532
17 3300031712 Ga0265342_10000027 Ga0265342_1000002724 540
18 3300009148 Ga0105243_10054075 Ga0105243_100540751 548
19 3300060353 Ga0501082_0025593 Ga0501082_0025593_2393_4174 549
20 3300048904 Ga0496101_0020329 Ga0496101_0020329_2479_4266 550
21 3300048907 Ga0496104_0000467 Ga0496104_0000467_20050_21837 550
22 3300048908 Ga0496105_0006031 Ga0496105_0006031_1253_3040 550
23 3300048912 Ga0496109_0001489 Ga0496109_0001489_6914_8701 550
24 3300048913 Ga0496110_0000642 Ga0496110_0000642_21656_23443 550
25 3300048914 Ga0496111_0000034 Ga0496111_0000034_42659_44446 550
26 3300048917 Ga0496114_0087993 Ga0496114_0087993_461_2248 550
27 3300005458 Ga0070681_10005148 Ga0070681_100051482 551
28 3300005530 Ga0070679_100006178 Ga0070679_1000061786 551
29 3300025912 Ga0207707_10020685 Ga0207707_100206852 551
30 3300025921 Ga0207652_10041429 Ga0207652_100414293 551
31 3300025981 Ga0207640_10059279 Ga0207640_100592792 551
32 3300031733 Ga0316577_10003301 Ga0316577_100033012 551
33 3300048917 Ga0496114_0006811 Ga0496114_0006811_93_1874 551
34 3300046615 Ga0495656_0008035 Ga0495656_0008035_1847_3628 552
35 3300048908 Ga0496105_0093486 Ga0496105_0093486_123_1889 553
36 3300048912 Ga0496109_0119794 Ga0496109_0119794_675_2441 553
37 3300028563 Ga0265319_1003213 Ga0265319_10032132 561
38 3300039437 Ga0436365_0699528 Ga0436365_0699528_1325_3076 563
39 3300028563 Ga0265319_1000155 Ga0265319_100015513 566
40 3300028577 Ga0265318_10000123 Ga0265318_1000012310 566
41 3300028800 Ga0265338_10119163 Ga0265338_101191632 566
42 3300031239 Ga0265328_10030320 Ga0265328_100303202 566
43 3300031240 Ga0265320_10001593 Ga0265320_1000159313 566
44 3300031241 Ga0265325_10012798 Ga0265325_100127982 566
45 3300031242 Ga0265329_10002583 Ga0265329_100025837 566
46 3300031249 Ga0265339_10002389 Ga0265339_1000238911 566
47 3300031250 Ga0265331_10000047 Ga0265331_1000004769 566
48 3300031344 Ga0265316_10000204 Ga0265316_100002048 566
49 3300031595 Ga0265313_10001103 Ga0265313_100011037 566
50 3300031711 Ga0265314_10008533 Ga0265314_100085337 566
51 3300031712 Ga0265342_10000158 Ga0265342_1000015848 566
52 3300035692 Ga0373935_0004517 Ga0373935_0004517_5549_7309 566
53 3300046517 Ga0495630_0055660 Ga0495630_0055660_502_2262 566
54 3300046529 Ga0495652_0029939 Ga0495652_0029939_2033_3793 566
55 3300046535 Ga0495586_0003319 Ga0495586_0003319_2354_4114 566
56 3300046679 Ga0495623_0011636 Ga0495623_0011636_2885_4645 566
57 3300047673 Ga0495593_0004632 Ga0495593_0004632_871_2631 566
58 3300048912 Ga0496109_0062211 Ga0496109_0062211_1344_3056 569
59 3300005435 Ga0070714_100000049 Ga0070714_10000004976 570
60 3300005536 Ga0070697_100000017 Ga0070697_10000001729 570
61 3300005536 Ga0070697_100001874 Ga0070697_1000018744 570
62 3300006173 Ga0070716_100081132 Ga0070716_1000811322 570
63 3300006871 Ga0075434_100000564 Ga0075434_1000005645 570
64 3300025906 Ga0207699_10012301 Ga0207699_100123012 570
65 3300025939 Ga0207665_10048773 Ga0207665_100487732 570
66 3300028800 Ga0265338_10001510 Ga0265338_1000151024 570
67 3300050512 nmdc:mga0n895_325_c1 nmdc:mga0n895_325_c1_26682_28415 570
68 3300050515 nmdc:mga0a205_10201_c2 nmdc:mga0a205_10201_c2_3196_4929 570
69 3300038443 Ga0395901_0107528 Ga0395901_0107528_889_2610 571
70 3300005356 Ga0070674_100111649 Ga0070674_1001116491 572
71 3300005436 Ga0070713_100011123 Ga0070713_1000111234 572
72 3300009093 Ga0105240_10008052 Ga0105240_100080522 572
73 3300009093 Ga0105240_10084017 Ga0105240_100840172 572
74 3300009098 Ga0105245_10010296 Ga0105245_100102962 572
75 3300013296 Ga0157374_10086462 Ga0157374_100864622 572
76 3300013297 Ga0157378_10001056 Ga0157378_1000105613 572
77 3300021384 Ga0213876_10011100 Ga0213876_100111002 572
78 3300025913 Ga0207695_10060429 Ga0207695_100604292 572
79 3300031241 Ga0265325_10007699 Ga0265325_100076993 572
80 3300031250 Ga0265331_10006024 Ga0265331_100060244 572
81 3300031344 Ga0265316_10005534 Ga0265316_100055349 572
82 3300035118 Ga0373954_0016581 Ga0373954_0016581_1452_3206 572
83 3300039437 Ga0436365_1924551 Ga0436365_1924551_1977_3725 572
84 3300046462 Ga0495651_0000075 Ga0495651_0000075_34353_36128 572
85 3300046463 Ga0495653_0023682 Ga0495653_0023682_2891_4663 572
86 3300046511 Ga0495608_0009569 Ga0495608_0009569_3604_5376 572
87 3300046511 Ga0495608_0021771 Ga0495608_0021771_808_2562 572
88 3300046514 Ga0495618_0017758 Ga0495618_0017758_910_2682 572
89 3300046516 Ga0495628_0000971 Ga0495628_0000971_7142_8914 572
90 3300046516 Ga0495628_0006530 Ga0495628_0006530_1069_2823 572
91 3300046517 Ga0495630_0004587 Ga0495630_0004587_4820_6580 572
92 3300046517 Ga0495630_0005768 Ga0495630_0005768_3432_5192 572
93 3300046517 Ga0495630_0100760 Ga0495630_0100760_265_2040 572
94 3300046529 Ga0495652_0004932 Ga0495652_0004932_7740_9512 572
95 3300046536 Ga0495587_0000619 Ga0495587_0000619_7182_8954 572
96 3300046559 Ga0495667_0006207 Ga0495667_0006207_757_2532 572
97 3300046559 Ga0495667_0008865 Ga0495667_0008865_4987_6759 572
98 3300046675 Ga0495657_0000981 Ga0495657_0000981_7158_8930 572
99 3300046675 Ga0495657_0005465 Ga0495657_0005465_4490_6244 572
100 3300046678 Ga0495599_0012986 Ga0495599_0012986_3273_5045 572
101 3300047317 Ga0495604_0000278 Ga0495604_0000278_12103_13875 572
102 3300047317 Ga0495604_0010093 Ga0495604_0010093_3464_5218 572
103 3300047319 Ga0495674_0035044 Ga0495674_0035044_2655_4415 572
104 3300047319 Ga0495674_0068688 Ga0495674_0068688_92_1852 572
105 3300047322 Ga0495680_0000479 Ga0495680_0000479_34363_36138 572
106 3300047322 Ga0495680_0009534 Ga0495680_0009534_2338_4110 572
107 3300047322 Ga0495680_0077372 Ga0495680_0077372_602_2362 572
108 3300047444 Ga0495675_0003540 Ga0495675_0003540_6593_8353 572
109 3300047444 Ga0495675_0004150 Ga0495675_0004150_5039_6811 572
110 3300047471 Ga0495684_0001174 Ga0495684_0001174_12254_14026 572
111 3300047471 Ga0495684_0001435 Ga0495684_0001435_12545_14299 572
112 3300048088 Ga0495602_0018676 Ga0495602_0018676_4902_6674 572
113 3300048915 Ga0496112_0053952 Ga0496112_0053952_705_2465 572
114 3300048917 Ga0496114_0054353 Ga0496114_0054353_1514_3295 572
115 3300005435 Ga0070714_100057640 Ga0070714_1000576402 573
116 3300014497 Ga0182008_10003382 Ga0182008_100033824 573
117 3300015262 Ga0182007_10012329 Ga0182007_100123293 573
118 3300025928 Ga0207700_10042342 Ga0207700_100423422 573
119 3300037466 Ga0395898_0079919 Ga0395898_0079919_765_2492 573
120 3300044694 Ga0466963_0044855 Ga0466963_0044855_672_2399 573
121 3300045836 Ga0466958_0000705 Ga0466958_0000705_10583_12310 573
122 3300045976 Ga0466967_0037450 Ga0466967_0037450_2067_3794 573
123 3300049571 Ga0501034_0153464 Ga0501034_0153464_506_2233 573
124 3300049585 Ga0501069_0012917 Ga0501069_0012917_1532_3259 573
125 3300049586 Ga0501070_0002493 Ga0501070_0002493_10810_12537 573
126 3300005435 Ga0070714_100000058 Ga0070714_10000005847 574
127 3300005563 Ga0068855_100012248 Ga0068855_1000122487 574
128 3300006028 Ga0070717_10003939 Ga0070717_1000393910 574
129 3300025929 Ga0207664_10000080 Ga0207664_1000008042 574
130 3300025949 Ga0207667_10034198 Ga0207667_100341981 574
131 3300037471 Ga0395905_0048866 Ga0395905_0048866_1541_3271 574
132 3300005435 Ga0070714_100000665 Ga0070714_1000006658 575
133 3300005435 Ga0070714_100084203 Ga0070714_1000842031 575
134 3300005985 Ga0081539_10000388 Ga0081539_100003885 575
135 3300025928 Ga0207700_10000001 Ga0207700_10000001965 575
136 3300025929 Ga0207664_10000238 Ga0207664_1000023832 575
137 3300025929 Ga0207664_10036054 Ga0207664_100360542 575
138 3300028577 Ga0265318_10025539 Ga0265318_100255391 575
139 3300028800 Ga0265338_10007652 Ga0265338_100076524 575
140 3300031241 Ga0265325_10016694 Ga0265325_100166943 575
141 3300031249 Ga0265339_10004324 Ga0265339_100043247 575
142 3300031344 Ga0265316_10024520 Ga0265316_100245204 575
143 3300031711 Ga0265314_10018297 Ga0265314_100182974 575
144 3300045976 Ga0466967_0101344 Ga0466967_0101344_292_2031 575
145 3300045976 Ga0466967_0178084 Ga0466967_0178084_174_1907 575
146 3300048914 Ga0496111_0082875 Ga0496111_0082875_452_2197 575
147 3300048915 Ga0496112_0001830 Ga0496112_0001830_6779_8515 575
148 3300048915 Ga0496112_0011071 Ga0496112_0011071_4313_6052 575
149 3300009177 Ga0105248_10051422 Ga0105248_100514224 576
150 3300038735 Ga0400485_01843 Ga0400485_01843_1470_3200 576
151 3300038742 Ga0400486_25513 Ga0400486_25513_4086_5816 576
152 3300003322 rootL2_10122128 rootL2_101221283 577
153 3300005289 Ga0065704_10079674 Ga0065704_100796742 577
154 3300005340 Ga0070689_100000005 Ga0070689_10000000594 577
155 3300005365 Ga0070688_100022222 Ga0070688_1000222222 577
156 3300005456 Ga0070678_100068177 Ga0070678_1000681772 577
157 3300005617 Ga0068859_100122581 Ga0068859_1001225812 577
158 3300006844 Ga0075428_100006543 Ga0075428_1000065437 577
159 3300006846 Ga0075430_100022474 Ga0075430_1000224742 577
160 3300006847 Ga0075431_100032527 Ga0075431_1000325272 577
161 3300006931 Ga0097620_100122588 Ga0097620_1001225882 577
162 3300009094 Ga0111539_10054040 Ga0111539_100540402 577
163 3300013306 Ga0163162_10079653 Ga0163162_100796532 577
164 3300013306 Ga0163162_10102480 Ga0163162_101024802 577
165 3300025922 Ga0207646_10040093 Ga0207646_100400932 577
166 3300025936 Ga0207670_10000004 Ga0207670_10000004366 577
167 3300026095 Ga0207676_10119306 Ga0207676_101193062 577
168 3300028577 Ga0265318_10000042 Ga0265318_1000004297 577
169 3300031235 Ga0265330_10000026 Ga0265330_10000026108 577
170 3300031239 Ga0265328_10003259 Ga0265328_100032592 577
171 3300031240 Ga0265320_10000016 Ga0265320_10000016153 577
172 3300031242 Ga0265329_10004542 Ga0265329_100045422 577
173 3300031250 Ga0265331_10000010 Ga0265331_10000010153 577
174 3300031344 Ga0265316_10005114 Ga0265316_1000511410 577
175 3300031595 Ga0265313_10001750 Ga0265313_1000175013 577
176 3300031595 Ga0265313_10013158 Ga0265313_100131583 577
177 3300031711 Ga0265314_10000035 Ga0265314_10000035114 577
178 3300031712 Ga0265342_10016700 Ga0265342_100167002 577
179 3300032002 Ga0307416_100025360 Ga0307416_1000253603 577
180 3300046511 Ga0495608_0020826 Ga0495608_0020826_1871_3613 577
181 3300046517 Ga0495630_0004440 Ga0495630_0004440_5234_6976 577
182 3300046559 Ga0495667_0028459 Ga0495667_0028459_1261_3003 577
183 3300046689 Ga0495613_0000258 Ga0495613_0000258_42162_43904 577
184 3300047317 Ga0495604_0043117 Ga0495604_0043117_1389_3131 577
185 3300047471 Ga0495684_0004364 Ga0495684_0004364_3692_5434 577
186 3300050510 nmdc:mga06r32_55306_c1 nmdc:mga06r32_55306_c1_865_2607 577
187 3300053085 Ga0495619_0004927 Ga0495619_0004927_960_2702 577
188 3300053153 Ga0500616_0010781 Ga0500616_0010781_1442_3205 577

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF16861

Carbam_trans_C

Carbamoyltransferase C-terminus

440

608

0.99

PF02543

Carbam_trans_N

Carbamoyltransferase N-terminus

36

387

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
7xb6-assembly4.cif.gz_D crystal structure of the o-carbamoyltransferase vtdb in complex with carbamoyl adenylate intermediate 0.8508 3 576
7vx0-assembly1.cif.gz_B the structure of gdmn complex with atp 0.8497 3 577
7xb6-assembly4.cif.gz_D crystal structure of the o-carbamoyltransferase vtdb in complex with carbamoyl adenylate intermediate 0.8451 3 576
3vez-assembly1.cif.gz_A crystal structure of the o-carbamoyltransferase tobz k443a variant in complex with atp, adp and carbamoyl phosphate 0.8438 3 575
3vez-assembly1.cif.gz_A crystal structure of the o-carbamoyltransferase tobz k443a variant in complex with atp, adp and carbamoyl phosphate 0.841 3 575
ID Description Score Start End Superfamily
af_Q58458_398_606_3.90.870.20 Alpha Beta;Alpha-Beta Complex;DHBP synthase;Carbamoyltransferase, C-terminal domain 0.972 370 574 3.90.870.20
3vewA03 Alpha Beta;Alpha-Beta Complex;DHBP synthase;Carbamoyltransferase, C-terminal domain 0.9691 371 574 3.90.870.20
af_Q58451_301_510_3.90.870.20 Alpha Beta;Alpha-Beta Complex;DHBP synthase;Carbamoyltransferase, C-terminal domain 0.9659 369 572 3.90.870.20
3vewA03 Alpha Beta;Alpha-Beta Complex;DHBP synthase;Carbamoyltransferase, C-terminal domain 0.9552 371 574 3.90.870.20
af_Q58458_398_606_3.90.870.20 Alpha Beta;Alpha-Beta Complex;DHBP synthase;Carbamoyltransferase, C-terminal domain 0.9492 370 574 3.90.870.20
ID Description Score Start End GO Terms
AF-A0A2V9F448-F1-model_v4 Carbamoyltransferase C-terminal domain-containing protein 0.9976 459 576
AF-A0A3N5SBW2-F1-model_v4 Carbamoyltransferase 0.9974 1 66 GO:0009058
GO:0016740
AF-A0A7W1HX92-F1-model_v4 Carbamoyltransferase 0.9971 298 576 GO:0003824
GO:0009058
AF-A0A352FHI3-F1-model_v4 Carbamoyltransferase 0.9944 370 575 GO:0016740
AF-A0A5C8W7C9-F1-model_v4 Carbamoyltransferase 0.9925 416 575 GO:0016740

Feature Viewer

pLDDT pTM Quality
93.48 0.93 High
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Predicted Structure (AlphaFold2)

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