F289487

General Info

Members Datasets Scaffolds Average Seq Length
188 123 376 416

Family's Representative Sequence

Representative Sequence 3300025915|Ga0207693_10017591|Ga0207693_100175912
Length 460
Sequence VKQQARSPCDSAAPSPPRYAPPGMRFAVKFLGCKVSQADAMLARRHLLEAGHVEVSEADAEVHVINTCCITGEAEAKSRQSVRRSLKTAPRVFVGGCAVNLHPAQFAEIDNGVKVFTGTAEDVAAEMASTAGPPSPGVPGACIDLEHDVLQRQPGRRSAGAWSGTRTRGFVKVQDGCDCHCAYCIIPTVRGSARSRPASGVLKEIERRAAQGQREIVMTGISVGDYRDPERGLDLGELLVEAAAVPGVERARLSSIEVIHVKGSLIAALRDEPKVCPHLHVPLQSGDDRVLEAMGRHYTSAEYLAALAALRAAVPGINITTDVIVGFPNEDRAAFQATLDLVERAGITRVHTFPYSSRPGTAAEGLRDRVPPEEKKRRAKTMRGLSEVRSRHHRAAKLGSTESVLVDKVAETQCSGYSSDYTRCYLPAGAAEAGELLEVTVEDLHADGLHVGTRAARVAT

Samples

Sample ID Description Type Environment
1 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
2 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
3 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
4 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
5 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
6 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
7 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
8 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
9 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
10 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
11 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
12 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
13 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
14 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
15 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
16 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
17 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
18 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
19 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
20 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
21 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
22 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
23 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
24 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
25 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
26 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
27 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
28 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
29 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
30 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
31 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
32 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
33 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
34 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
35 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
36 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
52 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
53 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
54 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
55 3300034816 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_3 Metagenome Rhizosphere
56 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
57 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
58 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
59 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
60 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
61 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
62 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
63 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
64 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
65 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
66 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
67 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
68 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
69 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
70 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
71 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
72 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
73 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
74 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
75 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
76 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
77 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
78 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
79 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
80 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
81 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
82 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
83 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
84 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
85 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
86 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
87 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
88 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
89 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
90 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
91 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
92 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
93 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
94 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
95 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
96 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
97 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
98 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
99 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
100 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
101 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
102 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
103 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
104 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
105 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
106 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
107 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
108 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
109 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
110 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
111 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
112 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
113 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
114 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
115 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
116 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
117 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
118 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
119 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
120 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
121 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
122 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
123 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.53
Nodule 0
Rhizoplane 9.04
Rhizosphere 72.34
Stem 0
Stem Tuber 0
Unclassified 8.51

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207693_10017591 3300025915 Bacteria 5700
2 Ga0070676_10009936 3300005328 Bacteria 5151
3 Ga0070670_100027489 3300005331 Bacteria 4893
4 Ga0070674_100063402 3300005356 Bacteria 2587
5 Ga0070673_100000157 3300005364 Bacteria 32662
6 Ga0070709_10090877 3300005434 Bacteria 2014
7 Ga0070709_10112692 3300005434 Bacteria 1831
8 Ga0070714_100054594 3300005435 Bacteria 3413
9 Ga0070714_100122351 3300005435 Unclassified 2316
10 Ga0070713_100044247 3300005436 Bacteria 3644
11 Ga0070710_10041373 3300005437 Bacteria 2544
12 Ga0070711_100079788 3300005439 Bacteria 2328
13 Ga0070678_100000794 3300005456 Bacteria 15860
14 Ga0070706_100108422 3300005467 Bacteria 2584
15 Ga0070707_100008980 3300005468 Bacteria 9270
16 Ga0070697_100023366 3300005536 Bacteria 4916
17 Ga0070697_100058350 3300005536 Unclassified 3141
18 Ga0070696_100005341 3300005546 Bacteria 8568
19 Ga0070696_100151309 3300005546 Unclassified 1703
20 Ga0070696_100215630 3300005546 Bacteria 1438
21 Ga0070665_100017946 3300005548 Bacteria 7105
22 Ga0070704_100018534 3300005549 Bacteria 4453
23 Ga0070704_100106999 3300005549 Unclassified 2120
24 Ga0070664_100011180 3300005564 Bacteria 7281
25 Ga0068857_100295644 3300005577 Unclassified 1492
26 Ga0070717_10049511 3300006028 Bacteria 3450
27 Ga0070712_100001332 3300006175 Bacteria 14990
28 Ga0070712_100011330 3300006175 Bacteria 5650
29 Ga0075428_100016366 3300006844 Bacteria 8195
30 Ga0075430_100003153 3300006846 Bacteria 13797
31 Ga0075430_100225662 3300006846 Bacteria 1554
32 Ga0075436_100004777 3300006914 Bacteria 9305
33 Ga0075435_100081174 3300007076 Unclassified 2663
34 Ga0111539_10039240 3300009094 Bacteria 5709
35 Ga0111539_10245625 3300009094 Bacteria 2084
36 Ga0114129_10006109 3300009147 Bacteria 17079
37 Ga0157378_10001864 3300013297 Bacteria 18928
38 Ga0163162_10256117 3300013306 Bacteria 1882
39 Ga0157375_10056910 3300013308 Bacteria 3863
40 Ga0157375_10150898 3300013308 Bacteria 2459
41 Ga0157377_10034483 3300014745 Bacteria 2769
42 Ga0157376_10004047 3300014969 Bacteria 10139
43 Ga0213874_10000102 3300021377 Bacteria 13749
44 Ga0213876_10003172 3300021384 Bacteria 9462
45 Ga0213876_10022170 3300021384 Bacteria 3359
46 Ga0213876_10049123 3300021384 Bacteria 2228
47 Ga0213876_10060572 3300021384 Bacteria 1997
48 Ga0213876_10084422 3300021384 Bacteria 1680
49 Ga0213876_10096237 3300021384 Unclassified 1568
50 Ga0213875_10000351 3300021388 Bacteria 43186
51 Ga0213875_10004464 3300021388 Bacteria 7665
52 Ga0213875_10017436 3300021388 Bacteria 3468
53 Ga0213875_10099995 3300021388 Bacteria 1353
54 Ga0207653_10001469 3300025885 Bacteria 7655
55 Ga0207699_10009675 3300025906 Bacteria 4810
56 Ga0207684_10105522 3300025910 Bacteria 2410
57 Ga0207693_10000679 3300025915 Bacteria 30553
58 Ga0207693_10000942 3300025915 Bacteria 26110
59 Ga0207663_10007674 3300025916 Bacteria 5609
60 Ga0207663_10047695 3300025916 Bacteria 2647
61 Ga0207646_10082130 3300025922 Unclassified 2882
62 Ga0207650_10012621 3300025925 Bacteria 5831
63 Ga0207659_10013936 3300025926 Bacteria 5170
64 Ga0207700_10000004 3300025928 Bacteria 443409
65 Ga0207700_10057605 3300025928 Bacteria 2931
66 Ga0207664_10012427 3300025929 Bacteria 6087
67 Ga0207664_10085018 3300025929 Bacteria 2581
68 Ga0207706_10002970 3300025933 Bacteria 16356
69 Ga0207665_10001907 3300025939 Bacteria 14050
70 Ga0207665_10036498 3300025939 Bacteria 3269
71 Ga0207691_10000357 3300025940 Bacteria 46128
72 Ga0207651_10000059 3300025960 Bacteria 48777
73 Ga0207648_10045511 3300026089 Bacteria 3849
74 Ga0207683_10001845 3300026121 Bacteria 18736
75 Ga0207428_10009578 3300027907 Bacteria 8675
76 Ga0265319_1000866 3300028563 Bacteria 19240
77 Ga0265318_10001325 3300028577 Bacteria 14827
78 Ga0265325_10108680 3300031241 Bacteria 1350
79 Ga0373930_0009287 3300034816 Bacteria 1738
80 Ga0373928_0001176 3300035084 Bacteria 5171
81 Ga0373929_0004374 3300035085 Bacteria 2534
82 Ga0373949_0007402 3300035090 Bacteria 2404
83 Ga0373951_0002223 3300035091 Bacteria 4931
84 Ga0373939_0002791 3300035114 Bacteria 4097
85 Ga0373941_0001098 3300035115 Bacteria 5646
86 Ga0373960_0001232 3300035121 Bacteria 5605
87 Ga0373942_0010522 3300035207 Bacteria 2178
88 Ga0373961_0002644 3300035241 Bacteria 4598
89 Ga0373962_0001966 3300035242 Bacteria 4900
90 Ga0395899_0118544 3300037312 Bacteria 1898
91 Ga0395900_0116060 3300037418 Bacteria 2747
92 Ga0395898_0058866 3300037466 Bacteria 3739
93 Ga0395898_0114677 3300037466 Bacteria 2582
94 Ga0395898_0266941 3300037466 Bacteria 1632
95 Ga0436364_0129185 3300037853 Bacteria 2717
96 Ga0436364_0358577 3300037853 Bacteria 27430
97 Ga0436364_0366425 3300037853 Bacteria 2307
98 Ga0436364_0387113 3300037853 Bacteria 7106
99 Ga0436364_0439772 3300037853 Bacteria 3988
100 Ga0436364_0690446 3300037853 Bacteria 17320
101 Ga0436364_0840900 3300037853 Bacteria 42362
102 Ga0436364_1313652 3300037853 Bacteria 7318
103 Ga0436364_1426665 3300037853 Bacteria 33049
104 Ga0436365_0025272 3300039437 Bacteria 37971
105 Ga0436365_0062040 3300039437 Bacteria 25145
106 Ga0436365_0095147 3300039437 Bacteria 17914
107 Ga0436365_0584081 3300039437 Bacteria 3262
108 Ga0436365_1434198 3300039437 Bacteria 11133
109 Ga0436365_1486005 3300039437 Bacteria 16123
110 Ga0436365_1590315 3300039437 Bacteria 4889
111 Ga0436365_1699589 3300039437 Bacteria 12154
112 Ga0436360_0724459 3300039438 Bacteria 2319
113 Ga0436361_1019564 3300039447 Unclassified 1578
114 Ga0436363_0023518 3300039450 Bacteria 29320
115 Ga0436363_0354897 3300039450 Bacteria 1844
116 Ga0436363_0406179 3300039450 Bacteria 5866
117 Ga0436363_0563429 3300039450 Bacteria 3012
118 Ga0436363_0836778 3300039450 Unclassified 1524
119 Ga0436362_0158977 3300039453 Unclassified 1424
120 Ga0436362_0370647 3300039453 Bacteria 2208
121 Ga0451853_1038511 3300041512 Bacteria 3106
122 Ga0466966_0058477 3300044684 Unclassified 2436
123 Ga0466963_0004046 3300044694 Bacteria 8486
124 Ga0466963_0053841 3300044694 Bacteria 2673
125 Ga0453684_0209771 3300044712 Unclassified 2265
126 Ga0466959_0004941 3300045049 Bacteria 9033
127 Ga0466959_0054261 3300045049 Bacteria 2929
128 Ga0466959_0072126 3300045049 Bacteria 2500
129 Ga0466959_0091196 3300045049 Bacteria 2188
130 Ga0466959_0168709 3300045049 Unclassified 1536
131 Ga0466958_0001679 3300045836 Bacteria 10684
132 Ga0466958_0011096 3300045836 Bacteria 5068
133 Ga0466958_0021020 3300045836 Bacteria 3811
134 Ga0466958_0039910 3300045836 Bacteria 2821
135 Ga0466967_0020723 3300045976 Bacteria 5322
136 Ga0466967_0031623 3300045976 Bacteria 4458
137 Ga0466967_0043305 3300045976 Bacteria 3897
138 Ga0466967_0394829 3300045976 Unclassified 1345
139 Ga0495651_0005072 3300046462 Bacteria 10053
140 Ga0495653_0052396 3300046463 Bacteria 3127
141 Ga0495608_0002842 3300046511 Bacteria 12409
142 Ga0495618_0059895 3300046514 Bacteria 2413
143 Ga0495628_0049272 3300046516 Bacteria 3336
144 Ga0495652_0052075 3300046529 Bacteria 3493
145 Ga0495600_0010365 3300046809 Bacteria 5784
146 Ga0495680_0015905 3300047322 Bacteria 6477
147 Ga0496100_0018486 3300048903 Bacteria 4135
148 Ga0496101_0009010 3300048904 Bacteria 6541
149 Ga0496103_0012634 3300048906 Bacteria 5009
150 Ga0496104_0036777 3300048907 Bacteria 4577
151 Ga0496106_0051864 3300048909 Bacteria 3093
152 Ga0496109_0033054 3300048912 Bacteria 4652
153 Ga0496109_0038379 3300048912 Bacteria 4330
154 Ga0496110_0268981 3300048913 Bacteria 1552
155 Ga0496111_0097973 3300048914 Unclassified 2153
156 Ga0496112_0002731 3300048915 Bacteria 14290
157 Ga0496112_0020872 3300048915 Bacteria 6216
158 Ga0496112_0194570 3300048915 Bacteria 1989
159 Ga0496113_0012983 3300048916 Bacteria 5620
160 Ga0496113_0020543 3300048916 Bacteria 4644
161 Ga0496113_0083844 3300048916 Bacteria 2446
162 Ga0496114_0019739 3300048917 Bacteria 5463
163 Ga0496115_0147399 3300048918 Bacteria 1943
164 Ga0501031_0078395 3300049568 Bacteria 2153
165 Ga0501032_0073178 3300049569 Bacteria 2283
166 Ga0501032_0184836 3300049569 Bacteria 1364
167 Ga0501036_0059152 3300049572 Bacteria 3247
168 Ga0501036_0087583 3300049572 Bacteria 2632
169 Ga0501038_0012157 3300049574 Bacteria 7858
170 Ga0501038_0013413 3300049574 Bacteria 7470
171 Ga0501041_0003368 3300049577 Bacteria 9198
172 Ga0501042_0012155 3300049578 Bacteria 5824
173 Ga0501043_0045401 3300049579 Bacteria 3456
174 Ga0501046_0041323 3300049580 Bacteria 3680
175 Ga0501048_0064992 3300049582 Bacteria 2580
176 Ga0501071_0043710 3300049587 Bacteria 3213
177 Ga0501077_0145071 3300049593 Bacteria 1506
178 Ga0501079_0034491 3300049741 Bacteria 3894
179 Ga0501035_0011683 3300049822 Bacteria 8139
180 Ga0501044_0299334 3300049823 Bacteria 1538
181 Ga0501045_0009755 3300049824 Bacteria 6715
182 nmdc:mga0yw44_22461_c1 3300050492 Bacteria 3539
183 nmdc:mga08x19_62764_c1 3300050514 Bacteria 2410
184 nmdc:mga0a205_154106_c1 3300050515 Bacteria 2197
185 Ga0495595_0098948 3300053084 Bacteria 1406
186 Ga0495619_0132702 3300053085 Bacteria 1712
187 Ga0501084_0030726 3300054114 Bacteria 4491
188 Ga0466962_0040146 3300061719 Bacteria 2241
189 Ga0207693_10017591
190 Ga0070676_10009936
191 Ga0070670_100027489
192 Ga0070674_100063402
193 Ga0070673_100000157
194 Ga0070709_10090877
195 Ga0070709_10112692
196 Ga0070714_100054594
197 Ga0070714_100122351
198 Ga0070713_100044247
199 Ga0070710_10041373
200 Ga0070711_100079788
201 Ga0070678_100000794
202 Ga0070706_100108422
203 Ga0070707_100008980
204 Ga0070697_100023366
205 Ga0070697_100058350
206 Ga0070696_100005341
207 Ga0070696_100151309
208 Ga0070696_100215630
209 Ga0070665_100017946
210 Ga0070704_100018534
211 Ga0070704_100106999
212 Ga0070664_100011180
213 Ga0068857_100295644
214 Ga0070717_10049511
215 Ga0070712_100001332
216 Ga0070712_100011330
217 Ga0075428_100016366
218 Ga0075430_100003153
219 Ga0075430_100225662
220 Ga0075436_100004777
221 Ga0075435_100081174
222 Ga0111539_10039240
223 Ga0111539_10245625
224 Ga0114129_10006109
225 Ga0157378_10001864
226 Ga0163162_10256117
227 Ga0157375_10056910
228 Ga0157375_10150898
229 Ga0157377_10034483
230 Ga0157376_10004047
231 Ga0213874_10000102
232 Ga0213876_10003172
233 Ga0213876_10022170
234 Ga0213876_10049123
235 Ga0213876_10060572
236 Ga0213876_10084422
237 Ga0213876_10096237
238 Ga0213875_10000351
239 Ga0213875_10004464
240 Ga0213875_10017436
241 Ga0213875_10099995
242 Ga0207653_10001469
243 Ga0207699_10009675
244 Ga0207684_10105522
245 Ga0207693_10000679
246 Ga0207693_10000942
247 Ga0207663_10007674
248 Ga0207663_10047695
249 Ga0207646_10082130
250 Ga0207650_10012621
251 Ga0207659_10013936
252 Ga0207700_10000004
253 Ga0207700_10057605
254 Ga0207664_10012427
255 Ga0207664_10085018
256 Ga0207706_10002970
257 Ga0207665_10001907
258 Ga0207665_10036498
259 Ga0207691_10000357
260 Ga0207651_10000059
261 Ga0207648_10045511
262 Ga0207683_10001845
263 Ga0207428_10009578
264 Ga0265319_1000866
265 Ga0265318_10001325
266 Ga0265325_10108680
267 Ga0373930_0009287
268 Ga0373928_0001176
269 Ga0373929_0004374
270 Ga0373949_0007402
271 Ga0373951_0002223
272 Ga0373939_0002791
273 Ga0373941_0001098
274 Ga0373960_0001232
275 Ga0373942_0010522
276 Ga0373961_0002644
277 Ga0373962_0001966
278 Ga0395899_0118544
279 Ga0395900_0116060
280 Ga0395898_0058866
281 Ga0395898_0114677
282 Ga0395898_0266941
283 Ga0436364_0129185
284 Ga0436364_0358577
285 Ga0436364_0366425
286 Ga0436364_0387113
287 Ga0436364_0439772
288 Ga0436364_0690446
289 Ga0436364_0840900
290 Ga0436364_1313652
291 Ga0436364_1426665
292 Ga0436365_0025272
293 Ga0436365_0062040
294 Ga0436365_0095147
295 Ga0436365_0584081
296 Ga0436365_1434198
297 Ga0436365_1486005
298 Ga0436365_1590315
299 Ga0436365_1699589
300 Ga0436360_0724459
301 Ga0436361_1019564
302 Ga0436363_0023518
303 Ga0436363_0354897
304 Ga0436363_0406179
305 Ga0436363_0563429
306 Ga0436363_0836778
307 Ga0436362_0158977
308 Ga0436362_0370647
309 Ga0451853_1038511
310 Ga0466966_0058477
311 Ga0466963_0004046
312 Ga0466963_0053841
313 Ga0453684_0209771
314 Ga0466959_0004941
315 Ga0466959_0054261
316 Ga0466959_0072126
317 Ga0466959_0091196
318 Ga0466959_0168709
319 Ga0466958_0001679
320 Ga0466958_0011096
321 Ga0466958_0021020
322 Ga0466958_0039910
323 Ga0466967_0020723
324 Ga0466967_0031623
325 Ga0466967_0043305
326 Ga0466967_0394829
327 Ga0495651_0005072
328 Ga0495653_0052396
329 Ga0495608_0002842
330 Ga0495618_0059895
331 Ga0495628_0049272
332 Ga0495652_0052075
333 Ga0495600_0010365
334 Ga0495680_0015905
335 Ga0496100_0018486
336 Ga0496101_0009010
337 Ga0496103_0012634
338 Ga0496104_0036777
339 Ga0496106_0051864
340 Ga0496109_0033054
341 Ga0496109_0038379
342 Ga0496110_0268981
343 Ga0496111_0097973
344 Ga0496112_0002731
345 Ga0496112_0020872
346 Ga0496112_0194570
347 Ga0496113_0012983
348 Ga0496113_0020543
349 Ga0496113_0083844
350 Ga0496114_0019739
351 Ga0496115_0147399
352 Ga0501031_0078395
353 Ga0501032_0073178
354 Ga0501032_0184836
355 Ga0501036_0059152
356 Ga0501036_0087583
357 Ga0501038_0012157
358 Ga0501038_0013413
359 Ga0501041_0003368
360 Ga0501042_0012155
361 Ga0501043_0045401
362 Ga0501046_0041323
363 Ga0501048_0064992
364 Ga0501071_0043710
365 Ga0501077_0145071
366 Ga0501079_0034491
367 Ga0501035_0011683
368 Ga0501044_0299334
369 Ga0501045_0009755
370 nmdc:mga0yw44_22461_c1
371 nmdc:mga08x19_62764_c1
372 nmdc:mga0a205_154106_c1
373 Ga0495595_0098948
374 Ga0495619_0132702
375 Ga0501084_0030726
376 Ga0466962_0040146

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00919

UPF0004

Uncharacterized protein family UPF0004

25

118

0.93

PF04055

Radical_SAM

Radical SAM superfamily

171

342

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
7mjx-assembly1.cif.gz_A miab in the complex with 5'-deoxyadenosine, methionine and rna 0.9165 4 432
7mjx-assembly1.cif.gz_A miab in the complex with 5'-deoxyadenosine, methionine and rna 0.9084 4 432
7mjz-assembly1.cif.gz_A the structure of miab with pentasulfide bridge 0.9027 3 432
7mjz-assembly1.cif.gz_A the structure of miab with pentasulfide bridge 0.8967 3 432
2qgq-assembly1.cif.gz_A crystal structure of tm_1862 from thermotoga maritima. northeast structural genomics consortium target vr77 0.8816 146 432
ID Description Score Start End Superfamily
af_A0A0R0IRV7_127_250_3.30.750.200 Alpha Beta;2-Layer Sandwich;Transcription Regulator spoIIAA; 0.976 254 360 3.30.750.200
af_Q2FXZ6_140_373_3.80.30.20 Alpha Beta;Alpha-Beta Horseshoe;pyruvate-formate lyase- activating enzyme;tm_1862 like domain 0.9559 144 375 3.80.30.20
af_F1LV76_14_128_3.30.750.200 Alpha Beta;2-Layer Sandwich;Transcription Regulator spoIIAA; 0.9557 257 366 3.30.750.200
4jc0B03 Alpha Beta;2-Layer Sandwich;Transcription Regulator spoIIAA; 0.9548 258 375 3.30.750.200
af_Q96SZ6_246_518_3.80.30.20 Alpha Beta;Alpha-Beta Horseshoe;pyruvate-formate lyase- activating enzyme;tm_1862 like domain 0.9518 146 374 3.80.30.20
ID Description Score Start End GO Terms
AF-A0A7V5H414-F1-model_v4 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase MtaB 0.9784 4 432 GO:0035598
GO:0046872
GO:0051539
AF-A0A2M7XLY8-F1-model_v4 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB 0.9765 265 364 GO:0005829
GO:0035597
GO:0051539
AF-A0A679HWR2-F1-model_v4 Putative tRNA modifying enzyme, MiaB-like 0.9741 22 432 GO:0005829
GO:0035597
GO:0046872
GO:0051539
AF-A0A7V5H414-F1-model_v4 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase MtaB 0.9739 4 432 GO:0035598
GO:0046872
GO:0051539
AF-A0A1V5ZAK8-F1-model_v4 Threonylcarbamoyladenosine tRNA methylthiotransferase MtaB (EC 2.-.-.-) 0.9724 160 432 GO:0005829
GO:0035597
GO:0051539

Map