F289486

General Info

Members Datasets Scaffolds Average Seq Length
188 131 376 221

Family's Representative Sequence

Representative Sequence 3300025914|Ga0207671_10070803|Ga0207671_100708033
Length 258
Sequence LGDETCPAGAYGLIFCLESFVLIYDVMANINIANYINCPTWMHRLPAVYKLIVSFVVSGIISVALLPVHMEGMTRLMIGWDCFSACMIIISIVIFSSMRPRQIRVLAKTEDAGRLVVFVIVLAANIGSLLGVMLLLGNKDAWLLSKGVETFIYITGVVCSWLLTHMMFAYRYALLYYGDHPLDPDAHTVGLQIPNELWPDYLDFAYFSFVIGMTFQVSDIEISSREIRRVALVHGILSFLFNTVIVALTINVIVDLRN

Samples

Sample ID Description Type Environment
1 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
4 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
5 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
6 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
7 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
8 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
9 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
10 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
11 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
12 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
13 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
14 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
15 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
16 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
17 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
18 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
19 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
20 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
21 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
22 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
23 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
24 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
25 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
26 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
27 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
28 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
29 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
30 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
31 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
32 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
33 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
34 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
35 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
36 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
37 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
38 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
39 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
40 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
41 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
42 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
43 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
44 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
45 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
46 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
47 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
48 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
49 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
50 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
51 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
52 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
53 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
54 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
55 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
56 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
57 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
58 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
59 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
60 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
61 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
62 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
63 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
64 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
65 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
66 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
67 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
68 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
69 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
70 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
71 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
72 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
106 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
107 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
108 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
109 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
110 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
111 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
112 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
113 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
114 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
115 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
116 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
117 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
118 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
119 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
120 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
121 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
122 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
123 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
124 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
125 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
126 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
127 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
128 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
129 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
130 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
131 2902048731 Pedobacter ureilyticus THG-T11 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.47
Metatranscriptomes 0
Isolates 0.53

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.72
Nodule 0
Rhizoplane 0
Rhizosphere 88.3
Stem 0
Stem Tuber 0
Unclassified 13.3

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207671_10070803 3300025914 Bacteria 2600
2 rootH2_10053417 3300003320 Unclassified 3697
3 rootH2_10056053 3300003320 Bacteria 2738
4 rootH2_10134542 3300003320 Bacteria 17463
5 rootH1_10088446 3300003323 Bacteria 1342
6 rootH1_10279139 3300003323 Bacteria 3886
7 JGI25160J50197_1000749 3300003354 Bacteria 17612
8 Ga0065715_10275281 3300005293 Bacteria 1100
9 Ga0070658_10016901 3300005327 Bacteria 5839
10 Ga0070658_10461658 3300005327 Unclassified 1095
11 Ga0070670_100035860 3300005331 Bacteria 4270
12 Ga0070670_100122495 3300005331 Bacteria 2243
13 Ga0070677_10015382 3300005333 Unclassified 2711
14 Ga0068869_100015194 3300005334 Bacteria 5158
15 Ga0070666_10000152 3300005335 Bacteria 47539
16 Ga0070660_100284662 3300005339 Unclassified 1353
17 Ga0070661_100564129 3300005344 Unclassified 917
18 Ga0070668_100025637 3300005347 Bacteria 4472
19 Ga0070668_100492618 3300005347 Bacteria 1060
20 Ga0070675_100077329 3300005354 Bacteria 2770
21 Ga0070671_100132519 3300005355 Unclassified 2099
22 Ga0070674_100487867 3300005356 Bacteria 1024
23 Ga0070673_100025661 3300005364 Bacteria 4341
24 Ga0070667_100029033 3300005367 Bacteria 4606
25 Ga0070667_100496718 3300005367 Bacteria 1118
26 Ga0070713_100000140 3300005436 Bacteria 47882
27 Ga0070710_10028632 3300005437 Bacteria 2982
28 Ga0070711_100102443 3300005439 Bacteria 2085
29 Ga0070705_100461891 3300005440 Bacteria 955
30 Ga0070694_100352387 3300005444 Bacteria 1141
31 Ga0070708_100455575 3300005445 Unclassified 1207
32 Ga0068867_100802579 3300005459 Bacteria 839
33 Ga0070706_100001500 3300005467 Bacteria 24507
34 Ga0070697_100022717 3300005536 Bacteria 4983
35 Ga0068853_100054037 3300005539 Unclassified 3461
36 Ga0068853_100654279 3300005539 Bacteria 1000
37 Ga0070672_100047563 3300005543 Bacteria 3329
38 Ga0070665_100224830 3300005548 Bacteria 1877
39 Ga0070665_100287553 3300005548 Bacteria 1646
40 Ga0068855_100002892 3300005563 Bacteria 21009
41 Ga0068856_100077020 3300005614 Unclassified 3304
42 Ga0068856_100366656 3300005614 Bacteria 1459
43 Ga0068852_100055458 3300005616 Bacteria 3421
44 Ga0068852_100117229 3300005616 Unclassified 2431
45 Ga0068859_100000026 3300005617 Bacteria 188742
46 Ga0068864_100036554 3300005618 Bacteria 4186
47 Ga0068863_100000852 3300005841 Bacteria 30432
48 Ga0068863_100723812 3300005841 Bacteria 990
49 Ga0068858_100002202 3300005842 Bacteria 19732
50 Ga0068860_100003692 3300005843 Bacteria 15765
51 Ga0068860_100315687 3300005843 Bacteria 1533
52 Ga0070716_100192152 3300006173 Bacteria 1350
53 Ga0070712_100024112 3300006175 Bacteria 4027
54 Ga0070712_100354376 3300006175 Bacteria 1202
55 Ga0075362_10092654 3300006177 Unclassified 1404
56 Ga0097621_100100029 3300006237 Unclassified 2438
57 Ga0097621_100215136 3300006237 Unclassified 1673
58 Ga0097621_100536389 3300006237 Unclassified 1064
59 Ga0068871_100192561 3300006358 Bacteria 1757
60 Ga0068871_100575917 3300006358 Bacteria 1022
61 Ga0075433_10137056 3300006852 Bacteria 2175
62 Ga0075434_100144547 3300006871 Bacteria 2399
63 Ga0068865_100292088 3300006881 Bacteria 1301
64 Ga0075436_100387073 3300006914 Bacteria 1012
65 Ga0097620_100000026 3300006931 Bacteria 188742
66 Ga0075435_100314927 3300007076 Bacteria 1339
67 Ga0105240_10000061 3300009093 Bacteria 218897
68 Ga0105240_10001967 3300009093 Bacteria 33956
69 Ga0105240_10002508 3300009093 Bacteria 29504
70 Ga0105240_10006315 3300009093 Bacteria 17443
71 Ga0111539_10831508 3300009094 Bacteria 1074
72 Ga0105245_10318585 3300009098 Bacteria 1531
73 Ga0105247_10052790 3300009101 Bacteria 2507
74 Ga0114129_10208417 3300009147 Bacteria 2644
75 Ga0105241_10001448 3300009174 Bacteria 18175
76 Ga0105241_10276117 3300009174 Unclassified 1433
77 Ga0105242_10098058 3300009176 Bacteria 2479
78 Ga0105237_10000157 3300009545 Bacteria 96235
79 Ga0105237_10001479 3300009545 Bacteria 30952
80 Ga0105237_10002361 3300009545 Bacteria 23426
81 Ga0105237_10127857 3300009545 Bacteria 2535
82 Ga0105249_10000998 3300009553 Bacteria 25094
83 Ga0105239_10000566 3300010375 Bacteria 53074
84 Ga0105239_10044619 3300010375 Bacteria 4859
85 Ga0105239_10161837 3300010375 Bacteria 2501
86 Ga0105239_10249580 3300010375 Bacteria 1993
87 Ga0157374_10000080 3300013296 Bacteria 95624
88 Ga0157374_10001331 3300013296 Bacteria 21004
89 Ga0157374_10466287 3300013296 Unclassified 1265
90 Ga0157378_10263576 3300013297 Unclassified 1654
91 Ga0157378_10303587 3300013297 Bacteria 1546
92 Ga0157378_10393891 3300013297 Bacteria 1363
93 Ga0157378_10919837 3300013297 Bacteria 906
94 Ga0163162_10003091 3300013306 Bacteria 15896
95 Ga0157372_10113481 3300013307 Bacteria 3105
96 Ga0157372_11127679 3300013307 Bacteria 907
97 Ga0163163_10000553 3300014325 Bacteria 32772
98 Ga0163163_10064268 3300014325 Bacteria 3641
99 Ga0163163_10173526 3300014325 Bacteria 2202
100 Ga0157380_10591955 3300014326 Bacteria 1096
101 Ga0157379_10049418 3300014968 Bacteria 3756
102 Ga0157376_10000443 3300014969 Bacteria 26701
103 Ga0157376_10050614 3300014969 Bacteria 3447
104 Ga0157376_10082954 3300014969 Bacteria 2756
105 Ga0213872_10004517 3300021361 Bacteria 7371
106 Ga0213876_10260132 3300021384 Bacteria 922
107 Ga0209455_1023900 3300025272 Bacteria 1137
108 Ga0207426_1000170 3300025302 Bacteria 164216
109 Ga0207710_10026937 3300025900 Bacteria 2486
110 Ga0207680_10003267 3300025903 Bacteria 7634
111 Ga0207645_10078892 3300025907 Bacteria 2110
112 Ga0207705_10020751 3300025909 Bacteria 4689
113 Ga0207684_10002808 3300025910 Bacteria 17311
114 Ga0207654_10002116 3300025911 Bacteria 10171
115 Ga0207654_10056400 3300025911 Unclassified 2279
116 Ga0207695_10000057 3300025913 Bacteria 376090
117 Ga0207695_10000068 3300025913 Bacteria 324859
118 Ga0207695_10030707 3300025913 Bacteria 5912
119 Ga0207695_10272262 3300025913 Unclassified 1589
120 Ga0207671_10000450 3300025914 Bacteria 56924
121 Ga0207671_10001003 3300025914 Bacteria 34695
122 Ga0207671_10002525 3300025914 Bacteria 19503
123 Ga0207671_10010539 3300025914 Bacteria 7614
124 Ga0207693_10013992 3300025915 Bacteria 6461
125 Ga0207657_10216879 3300025919 Bacteria 1534
126 Ga0207646_10004559 3300025922 Bacteria 14990
127 Ga0207694_10023409 3300025924 Bacteria 4687
128 Ga0207650_10081167 3300025925 Bacteria 2460
129 Ga0207650_10245013 3300025925 Bacteria 1449
130 Ga0207687_10196792 3300025927 Bacteria 1572
131 Ga0207700_10000778 3300025928 Bacteria 18406
132 Ga0207665_10103167 3300025939 Bacteria 1994
133 Ga0207691_10266829 3300025940 Bacteria 1475
134 Ga0207689_10003065 3300025942 Bacteria 15394
135 Ga0207689_10104196 3300025942 Unclassified 2331
136 Ga0207667_10002437 3300025949 Bacteria 23292
137 Ga0207651_10176800 3300025960 Bacteria 1689
138 Ga0207712_10003846 3300025961 Bacteria 9483
139 Ga0207668_10025698 3300025972 Bacteria 3814
140 Ga0207668_10150872 3300025972 Bacteria 1799
141 Ga0207658_10054372 3300025986 Bacteria 2962
142 Ga0207677_10762699 3300026023 Bacteria 863
143 Ga0207703_10142878 3300026035 Bacteria 2079
144 Ga0207703_10270151 3300026035 Unclassified 1540
145 Ga0207639_10010701 3300026041 Bacteria 6353
146 Ga0207702_10316659 3300026078 Bacteria 1485
147 Ga0207641_10000215 3300026088 Bacteria 74812
148 Ga0207641_10696293 3300026088 Bacteria 1000
149 Ga0207648_10161478 3300026089 Bacteria 1979
150 Ga0207648_10301550 3300026089 Bacteria 1437
151 Ga0207676_10181253 3300026095 Bacteria 1844
152 Ga0207683_10203083 3300026121 Bacteria 1802
153 Ga0207698_10044438 3300026142 Bacteria 3338
154 Ga0268266_10176037 3300028379 Bacteria 1945
155 Ga0268264_10000801 3300028381 Bacteria 33940
156 Ga0307515_10000001 3300028794 Bacteria 4259510
157 Ga0307513_10040771 3300031456 Bacteria 5131
158 Ga0307509_10024743 3300031507 Bacteria 6719
159 Ga0307509_10025097 3300031507 Bacteria 6662
160 Ga0307509_10053438 3300031507 Bacteria 4308
161 Ga0307509_10382070 3300031507 Unclassified 1121
162 Ga0307510_10000062 3300033180 Bacteria 81920
163 Ga0373935_0083688 3300035692 Bacteria 2077
164 Ga0373927_0103456 3300035695 Bacteria 1853
165 Ga0373933_0086240 3300035724 Unclassified 1932
166 Ga0373937_0281331 3300036401 Unclassified 1571
167 Ga0373937_0379183 3300036401 Bacteria 1341
168 Ga0373925_0113425 3300037068 Bacteria 2096
169 Ga0436365_0006044 3300039437 Bacteria 2076
170 Ga0436365_0776009 3300039437 Bacteria 3202
171 Ga0436361_0377468 3300039447 Bacteria 5789
172 Ga0451577_0055774 3300042876 Bacteria 3524
173 Ga0466965_0296329 3300044683 Bacteria 876
174 Ga0466964_0259358 3300044706 Unclassified 860
175 Ga0453684_0041190 3300044712 Bacteria 6253
176 Ga0451576_1032427 3300045051 Bacteria 861
177 Ga0495580_0216775 3300046472 Bacteria 1316
178 Ga0495606_0003716 3300046507 Bacteria 15924
179 Ga0495668_0000175 3300046616 Bacteria 95600
180 Ga0495611_0001630 3300046648 Bacteria 10893
181 nmdc:mga05p37_256778_c1 3300050507 Bacteria 2094
182 nmdc:mga0rr50_626064_c1 3300050513 Bacteria 918
183 nmdc:mga0rr50_95445_c1 3300050513 Bacteria 2324
184 Ga0500635_0020267 3300053080 Bacteria 2035
185 Ga0495619_0262947 3300053085 Bacteria 1196
186 Ga0500594_0014308 3300053118 Bacteria 1898
187 Ga0500559_0003515 3300053136 Bacteria 7676
188 2902052742 2902048731 Bacteria 4976191
189 Ga0207671_10070803
190 rootH2_10053417
191 rootH2_10056053
192 rootH2_10134542
193 rootH1_10088446
194 rootH1_10279139
195 JGI25160J50197_1000749
196 Ga0065715_10275281
197 Ga0070658_10016901
198 Ga0070658_10461658
199 Ga0070670_100035860
200 Ga0070670_100122495
201 Ga0070677_10015382
202 Ga0068869_100015194
203 Ga0070666_10000152
204 Ga0070660_100284662
205 Ga0070661_100564129
206 Ga0070668_100025637
207 Ga0070668_100492618
208 Ga0070675_100077329
209 Ga0070671_100132519
210 Ga0070674_100487867
211 Ga0070673_100025661
212 Ga0070667_100029033
213 Ga0070667_100496718
214 Ga0070713_100000140
215 Ga0070710_10028632
216 Ga0070711_100102443
217 Ga0070705_100461891
218 Ga0070694_100352387
219 Ga0070708_100455575
220 Ga0068867_100802579
221 Ga0070706_100001500
222 Ga0070697_100022717
223 Ga0068853_100054037
224 Ga0068853_100654279
225 Ga0070672_100047563
226 Ga0070665_100224830
227 Ga0070665_100287553
228 Ga0068855_100002892
229 Ga0068856_100077020
230 Ga0068856_100366656
231 Ga0068852_100055458
232 Ga0068852_100117229
233 Ga0068859_100000026
234 Ga0068864_100036554
235 Ga0068863_100000852
236 Ga0068863_100723812
237 Ga0068858_100002202
238 Ga0068860_100003692
239 Ga0068860_100315687
240 Ga0070716_100192152
241 Ga0070712_100024112
242 Ga0070712_100354376
243 Ga0075362_10092654
244 Ga0097621_100100029
245 Ga0097621_100215136
246 Ga0097621_100536389
247 Ga0068871_100192561
248 Ga0068871_100575917
249 Ga0075433_10137056
250 Ga0075434_100144547
251 Ga0068865_100292088
252 Ga0075436_100387073
253 Ga0097620_100000026
254 Ga0075435_100314927
255 Ga0105240_10000061
256 Ga0105240_10001967
257 Ga0105240_10002508
258 Ga0105240_10006315
259 Ga0111539_10831508
260 Ga0105245_10318585
261 Ga0105247_10052790
262 Ga0114129_10208417
263 Ga0105241_10001448
264 Ga0105241_10276117
265 Ga0105242_10098058
266 Ga0105237_10000157
267 Ga0105237_10001479
268 Ga0105237_10002361
269 Ga0105237_10127857
270 Ga0105249_10000998
271 Ga0105239_10000566
272 Ga0105239_10044619
273 Ga0105239_10161837
274 Ga0105239_10249580
275 Ga0157374_10000080
276 Ga0157374_10001331
277 Ga0157374_10466287
278 Ga0157378_10263576
279 Ga0157378_10303587
280 Ga0157378_10393891
281 Ga0157378_10919837
282 Ga0163162_10003091
283 Ga0157372_10113481
284 Ga0157372_11127679
285 Ga0163163_10000553
286 Ga0163163_10064268
287 Ga0163163_10173526
288 Ga0157380_10591955
289 Ga0157379_10049418
290 Ga0157376_10000443
291 Ga0157376_10050614
292 Ga0157376_10082954
293 Ga0213872_10004517
294 Ga0213876_10260132
295 Ga0209455_1023900
296 Ga0207426_1000170
297 Ga0207710_10026937
298 Ga0207680_10003267
299 Ga0207645_10078892
300 Ga0207705_10020751
301 Ga0207684_10002808
302 Ga0207654_10002116
303 Ga0207654_10056400
304 Ga0207695_10000057
305 Ga0207695_10000068
306 Ga0207695_10030707
307 Ga0207695_10272262
308 Ga0207671_10000450
309 Ga0207671_10001003
310 Ga0207671_10002525
311 Ga0207671_10010539
312 Ga0207693_10013992
313 Ga0207657_10216879
314 Ga0207646_10004559
315 Ga0207694_10023409
316 Ga0207650_10081167
317 Ga0207650_10245013
318 Ga0207687_10196792
319 Ga0207700_10000778
320 Ga0207665_10103167
321 Ga0207691_10266829
322 Ga0207689_10003065
323 Ga0207689_10104196
324 Ga0207667_10002437
325 Ga0207651_10176800
326 Ga0207712_10003846
327 Ga0207668_10025698
328 Ga0207668_10150872
329 Ga0207658_10054372
330 Ga0207677_10762699
331 Ga0207703_10142878
332 Ga0207703_10270151
333 Ga0207639_10010701
334 Ga0207702_10316659
335 Ga0207641_10000215
336 Ga0207641_10696293
337 Ga0207648_10161478
338 Ga0207648_10301550
339 Ga0207676_10181253
340 Ga0207683_10203083
341 Ga0207698_10044438
342 Ga0268266_10176037
343 Ga0268264_10000801
344 Ga0307515_10000001
345 Ga0307513_10040771
346 Ga0307509_10024743
347 Ga0307509_10025097
348 Ga0307509_10053438
349 Ga0307509_10382070
350 Ga0307510_10000062
351 Ga0373935_0083688
352 Ga0373927_0103456
353 Ga0373933_0086240
354 Ga0373937_0281331
355 Ga0373937_0379183
356 Ga0373925_0113425
357 Ga0436365_0006044
358 Ga0436365_0776009
359 Ga0436361_0377468
360 Ga0451577_0055774
361 Ga0466965_0296329
362 Ga0466964_0259358
363 Ga0453684_0041190
364 Ga0451576_1032427
365 Ga0495580_0216775
366 Ga0495606_0003716
367 Ga0495668_0000175
368 Ga0495611_0001630
369 nmdc:mga05p37_256778_c1
370 nmdc:mga0rr50_626064_c1
371 nmdc:mga0rr50_95445_c1
372 Ga0500635_0020267
373 Ga0495619_0262947
374 Ga0500594_0014308
375 Ga0500559_0003515
376 2902052742

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07077

DUF1345

Protein of unknown function (DUF1345)

72

248

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
6qkc-assembly1.cif.gz_D glua1/2 in complex with auxiliary subunit gamma-8 0.8261 157 207
3zrs-assembly1.cif.gz_A x-ray crystal structure of a kirbac potassium channel highlights a mechanism of channel opening at the bundle-crossing gate. 0.8107 107 207
2wlh-assembly1.cif.gz_A potassium channel from magnetospirillum magnetotacticum 0.8087 107 204
2wlj-assembly1.cif.gz_A-2 potassium channel from magnetospirillum magnetotacticum 0.8064 107 205
2wln-assembly1.cif.gz_A potassium channel from magnetospirillum magnetotacticum 0.8061 107 204
ID Description Score Start End Superfamily
af_P40310_240_361_1.10.287.70 Mainly Alpha;Orthogonal Bundle;Helix Hairpins; 0.8641 110 214 1.10.287.70
af_C4J1B8_195_284_1.10.287.70 Mainly Alpha;Orthogonal Bundle;Helix Hairpins; 0.8471 157 213 1.10.287.70
af_Q58752_1_108_1.10.287.70 Mainly Alpha;Orthogonal Bundle;Helix Hairpins; 0.8274 105 211 1.10.287.70
af_Q9S6Z8_234_346_1.10.287.70 Mainly Alpha;Orthogonal Bundle;Helix Hairpins; 0.8265 106 213 1.10.287.70
af_Q6UVM3_183_287_1.10.287.70 Mainly Alpha;Orthogonal Bundle;Helix Hairpins; 0.8156 99 213 1.10.287.70
ID Description Score Start End GO Terms
AF-A0A4R8DVC7-F1-model_v4 Putative membrane protein 0.9758 1 214 GO:0016020
AF-A0A4R8DVC7-F1-model_v4 Putative membrane protein 0.9713 1 214 GO:0016020
AF-A0A561J9F3-F1-model_v4 deleted 0.9681 1 214
AF-A0A561J9F3-F1-model_v4 deleted 0.9637 1 214
AF-A0A2V6NKG4-F1-model_v4 DUF1345 domain-containing protein 0.9574 1 212 GO:0016020

Map