F289282

General Info

Members Datasets Scaffolds Average Seq Length
188 125 376 459

Family's Representative Sequence

Representative Sequence 3300009147|Ga0114129_10360863|Ga0114129_103608632
Length 479
Sequence MVSDHSQLNLQEPSSMRPKWTFAVVSTALFMVVLDNLVVTTALPSIRADLGATIESLQWTVNAYTLSFAVLLLTGAALGDRFGRRRMFIVGVSLFTVASAAAALAPTTSALIAARAVQGAGAASVLPLTLTLLSEAFPAGRRGLVLGLWSGISGLAVAIGPLVGGAVVDGISWHWIFWINVPVGLAVIPFAARRLHESFGPARQIDLPGVALASAGLLGIVYGIVRGAELGWTSTTVLGSLIAGAELVAAFLAWEARAPEPMLPLRFFRSRGFAAVNGVSLAMYFGVFGSIFLLAQFFQVTQGYSPLEAGLRTLPWTIMPMFVAPIAGMLSDRIGSRPLMTAGLTLQAGAIAWLASISTPSVPYGDLVIPFMMAGAGMALVFAPAANAVLGAVRPEEAGQASGATNAIRELGGVLGVAVLASVFASHGSYASPAAYTDGMTSAIWVGAAVLAAGALTALLVPRRRATVAPVLAQVEATA

Samples

Sample ID Description Type Environment
1 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
7 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
8 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
9 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
10 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
11 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
12 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
13 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
14 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
15 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
16 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
17 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
18 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
19 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
20 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
21 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
22 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
23 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
24 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
25 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
26 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
27 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
28 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
29 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
30 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
31 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
32 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
33 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
34 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
35 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
36 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
37 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
38 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
39 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
40 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
41 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
60 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
62 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
63 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
64 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
65 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
66 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
67 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
68 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
69 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
70 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
71 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
72 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
73 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
74 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
75 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
76 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
77 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
78 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
79 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
80 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
81 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
82 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
83 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
84 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
85 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
86 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
87 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
88 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
89 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
90 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
91 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
92 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
93 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
94 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
95 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
96 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
97 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
98 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
99 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
100 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
101 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
102 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
103 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
104 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
105 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
106 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
107 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
108 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
109 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
110 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
111 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
112 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
113 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
114 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
115 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
116 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
117 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
118 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
119 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
120 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
121 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
122 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
123 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
124 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
125 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.6
Nodule 0
Rhizoplane 11.7
Rhizosphere 86.7
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0114129_10360863 3300009147 Bacteria 1922
2 JGI25406J46586_10004149 3300003203 Bacteria 6760
3 JGI25407J50210_10004095 3300003373 Bacteria 3540
4 Ga0070683_100055811 3300005329 Bacteria 3666
5 Ga0070683_100207786 3300005329 Bacteria 1859
6 Ga0070670_100000628 3300005331 Bacteria 27633
7 Ga0070670_100000896 3300005331 Bacteria 23474
8 Ga0070691_10069517 3300005341 Bacteria 1707
9 Ga0070661_100196053 3300005344 Bacteria 1542
10 Ga0070668_100027175 3300005347 Bacteria 4343
11 Ga0070675_100063444 3300005354 Bacteria 3054
12 Ga0070675_100120558 3300005354 Bacteria 2228
13 Ga0070674_100002694 3300005356 Bacteria 9825
14 Ga0070673_100023819 3300005364 Bacteria 4479
15 Ga0070688_100095808 3300005365 Bacteria 1948
16 Ga0070714_100046476 3300005435 Bacteria 3683
17 Ga0070700_100063391 3300005441 Bacteria 2338
18 Ga0070700_100100962 3300005441 Bacteria 1901
19 Ga0070681_10137218 3300005458 Bacteria 2376
20 Ga0070699_100004472 3300005518 Bacteria 12361
21 Ga0068853_100170828 3300005539 Bacteria 1967
22 Ga0070672_100095211 3300005543 Bacteria 2408
23 Ga0070686_100071260 3300005544 Bacteria 2274
24 Ga0068857_100011923 3300005577 Bacteria 7558
25 Ga0068866_10011746 3300005718 Bacteria 3799
26 Ga0068870_10004754 3300005840 Bacteria 5871
27 Ga0068870_10035157 3300005840 Bacteria 2569
28 Ga0081455_10011561 3300005937 Bacteria 8859
29 Ga0081455_10017743 3300005937 Bacteria 6808
30 Ga0081538_10000191 3300005981 Bacteria 67563
31 Ga0081538_10032260 3300005981 Bacteria 3514
32 Ga0075364_10030319 3300006051 Bacteria 3471
33 Ga0075428_100108491 3300006844 Bacteria 3026
34 Ga0075428_100213800 3300006844 Bacteria 2083
35 Ga0075430_100007077 3300006846 Bacteria 9458
36 Ga0075430_100018194 3300006846 Bacteria 5980
37 Ga0075431_100006895 3300006847 Bacteria 11290
38 Ga0075433_10027756 3300006852 Bacteria 4805
39 Ga0075429_100063214 3300006880 Bacteria 3225
40 Ga0068865_100059647 3300006881 Bacteria 2669
41 Ga0111539_10022286 3300009094 Bacteria 7786
42 Ga0111539_10140674 3300009094 Bacteria 2825
43 Ga0105245_10036601 3300009098 Bacteria 4361
44 Ga0114129_10188973 3300009147 Bacteria 2798
45 Ga0105243_10168978 3300009148 Bacteria 1892
46 Ga0105243_10429205 3300009148 Bacteria 1235
47 Ga0105242_10037777 3300009176 Bacteria 3881
48 Ga0105246_10012597 3300011119 Bacteria 5281
49 Ga0157375_10004070 3300013308 Bacteria 12678
50 Ga0163163_10019424 3300014325 Bacteria 6382
51 Ga0157376_10118760 3300014969 Bacteria 2340
52 Ga0163161_10087385 3300017792 Bacteria 2303
53 Ga0207688_10000587 3300025901 Bacteria 17888
54 Ga0207643_10001305 3300025908 Bacteria 14519
55 Ga0207643_10038884 3300025908 Bacteria 2674
56 Ga0207650_10001085 3300025925 Bacteria 20133
57 Ga0207659_10062382 3300025926 Bacteria 2690
58 Ga0207644_10042188 3300025931 Bacteria 3232
59 Ga0207706_10119681 3300025933 Bacteria 2315
60 Ga0207709_10126582 3300025935 Bacteria 1734
61 Ga0207691_10058447 3300025940 Bacteria 3507
62 Ga0207691_10095815 3300025940 Bacteria 2653
63 Ga0207689_10209681 3300025942 Bacteria 1609
64 Ga0207661_10036169 3300025944 Bacteria 3853
65 Ga0207661_10036437 3300025944 Bacteria 3840
66 Ga0207661_10069836 3300025944 Bacteria 2866
67 Ga0207661_10087401 3300025944 Bacteria 2589
68 Ga0207679_10070221 3300025945 Bacteria 2639
69 Ga0207651_10053508 3300025960 Bacteria 2760
70 Ga0207678_10203186 3300026067 Bacteria 1695
71 Ga0207708_10004042 3300026075 Bacteria 10786
72 Ga0207708_10084090 3300026075 Bacteria 2447
73 Ga0207674_10099001 3300026116 Bacteria 2899
74 Ga0207675_100114510 3300026118 Bacteria 2547
75 Ga0207683_10043365 3300026121 Bacteria 3931
76 Ga0207683_10043675 3300026121 Bacteria 3917
77 Ga0207683_10086359 3300026121 Bacteria 2789
78 Ga0207683_10127778 3300026121 Bacteria 2285
79 Ga0207698_10226762 3300026142 Bacteria 1693
80 Ga0207428_10004291 3300027907 Bacteria 13635
81 Ga0207428_10113859 3300027907 Bacteria 2079
82 Ga0207428_10133245 3300027907 Bacteria 1901
83 Ga0268266_10243330 3300028379 Bacteria 1661
84 Ga0265320_10057428 3300031240 Bacteria 1867
85 Ga0307413_10043294 3300031824 Bacteria 2652
86 Ga0307406_10051591 3300031901 Bacteria 2612
87 Ga0307412_10040324 3300031911 Bacteria 3021
88 Ga0307416_100088759 3300032002 Bacteria 2645
89 Ga0307416_100195027 3300032002 Bacteria 1915
90 Ga0307415_100012952 3300032126 Bacteria 4848
91 Ga0307415_100033803 3300032126 Bacteria 3321
92 Ga0307415_100103021 3300032126 Bacteria 2099
93 Ga0395899_0107564 3300037312 Bacteria 2007
94 Ga0395900_0101439 3300037418 Bacteria 2956
95 Ga0395900_0202915 3300037418 Bacteria 2005
96 Ga0395898_0003324 3300037466 Bacteria 18061
97 Ga0395898_0013612 3300037466 Bacteria 8371
98 Ga0395905_0004871 3300037471 Bacteria 13835
99 Ga0395905_0016329 3300037471 Bacteria 7054
100 Ga0395901_0029907 3300038443 Bacteria 5610
101 Ga0395901_0061792 3300038443 Bacteria 3898
102 Ga0436360_0049598 3300039438 Bacteria 2793
103 Ga0466957_0041959 3300044842 Bacteria 2767
104 Ga0466958_0031728 3300045836 Bacteria 3141
105 Ga0466958_0069206 3300045836 Bacteria 2158
106 Ga0466967_0188370 3300045976 Bacteria 1949
107 Ga0466967_0350705 3300045976 Bacteria 1428
108 Ga0495608_0041519 3300046511 Bacteria 3078
109 Ga0496100_0032208 3300048903 Bacteria 3266
110 Ga0496100_0206565 3300048903 Bacteria 1434
111 Ga0496101_0008576 3300048904 Bacteria 6683
112 Ga0496102_0089408 3300048905 Bacteria 2849
113 Ga0496102_0117300 3300048905 Bacteria 2484
114 Ga0496103_0017897 3300048906 Bacteria 4246
115 Ga0496104_0141432 3300048907 Bacteria 2312
116 Ga0496106_0003782 3300048909 Bacteria 11283
117 Ga0496106_0072384 3300048909 Bacteria 2636
118 Ga0496107_0010250 3300048910 Bacteria 6505
119 Ga0496107_0054117 3300048910 Bacteria 2896
120 Ga0496108_0001138 3300048911 Bacteria 20763
121 Ga0496108_0023589 3300048911 Bacteria 5064
122 Ga0496108_0066567 3300048911 Bacteria 3038
123 Ga0496109_0001955 3300048912 Bacteria 17076
124 Ga0496109_0020749 3300048912 Bacteria 5803
125 Ga0496109_0306643 3300048912 Bacteria 1497
126 Ga0496110_0002051 3300048913 Bacteria 15017
127 Ga0496110_0188637 3300048913 Bacteria 1872
128 Ga0496112_0044815 3300048915 Bacteria 4335
129 Ga0496113_0089743 3300048916 Bacteria 2366
130 Ga0496115_0005270 3300048918 Bacteria 9399
131 Ga0501031_0006349 3300049568 Bacteria 7710
132 Ga0501032_0071021 3300049569 Bacteria 2321
133 Ga0501033_0003061 3300049570 Bacteria 13903
134 Ga0501033_0118644 3300049570 Bacteria 1921
135 Ga0501034_0079036 3300049571 Bacteria 3293
136 Ga0501036_0012419 3300049572 Bacteria 7056
137 Ga0501036_0051663 3300049572 Bacteria 3480
138 Ga0501036_0082807 3300049572 Bacteria 2712
139 Ga0501037_0018088 3300049573 Bacteria 5191
140 Ga0501038_0007224 3300049574 Bacteria 10262
141 Ga0501038_0032974 3300049574 Bacteria 4563
142 Ga0501039_0006616 3300049575 Bacteria 8803
143 Ga0501039_0012464 3300049575 Bacteria 6491
144 Ga0501040_0021551 3300049576 Bacteria 4305
145 Ga0501042_0009859 3300049578 Bacteria 6381
146 Ga0501042_0077061 3300049578 Bacteria 2387
147 Ga0501042_0095606 3300049578 Bacteria 2134
148 Ga0501046_0100740 3300049580 Bacteria 2216
149 Ga0501068_0003963 3300049584 Bacteria 8050
150 Ga0501068_0005035 3300049584 Bacteria 7196
151 Ga0501068_0013802 3300049584 Bacteria 4603
152 Ga0501069_0000502 3300049585 Bacteria 17839
153 Ga0501070_0008189 3300049586 Bacteria 8840
154 Ga0501072_0007023 3300049588 Bacteria 8549
155 Ga0501072_0017315 3300049588 Bacteria 5538
156 Ga0501073_0141755 3300049589 Bacteria 1665
157 Ga0501074_0003187 3300049590 Bacteria 11570
158 Ga0501074_0086805 3300049590 Bacteria 2241
159 Ga0501075_0020311 3300049591 Bacteria 4830
160 Ga0501076_0038123 3300049592 Bacteria 3772
161 Ga0501076_0189844 3300049592 Bacteria 1676
162 Ga0501076_0328940 3300049592 Bacteria 1254
163 Ga0501077_0030030 3300049593 Bacteria 3457
164 Ga0501077_0055184 3300049593 Bacteria 2522
165 Ga0501080_0272705 3300049742 Bacteria 1539
166 Ga0501081_0055807 3300049743 Bacteria 2729
167 Ga0501083_0009962 3300049744 Bacteria 6707
168 Ga0501035_0003088 3300049822 Bacteria 15990
169 Ga0501035_0057436 3300049822 Bacteria 3470
170 Ga0501045_0007232 3300049824 Bacteria 7706
171 Ga0501045_0038167 3300049824 Bacteria 3493
172 nmdc:mga03683_45710_c1 3300050489 Bacteria 1813
173 nmdc:mga00v17_71214_c1 3300050491 Bacteria 2155
174 nmdc:mga05p37_347026_c1 3300050507 Bacteria 1748
175 nmdc:mga05p37_35357_c1 3300050507 Bacteria 6125
176 nmdc:mga09592_127445_c1 3300050508 Bacteria 2189
177 nmdc:mga09592_59971_c1 3300050508 Bacteria 3217
178 nmdc:mga0qj67_167027_c1 3300050509 Bacteria 1787
179 nmdc:mga0qj67_65132_c1 3300050509 Bacteria 2901
180 nmdc:mga06r32_39814_c1 3300050510 Bacteria 4461
181 nmdc:mga08y16_185353_c1 3300050511 Bacteria 2160
182 nmdc:mga08y16_353692_c1 3300050511 Bacteria 1508
183 nmdc:mga0a205_244838_c1 3300050515 Bacteria 1673
184 Ga0501084_0007596 3300054114 Bacteria 8937
185 Ga0501084_0126275 3300054114 Bacteria 2152
186 Ga0501084_0131272 3300054114 Bacteria 2108
187 Ga0501082_0017577 3300060353 Bacteria 6159
188 Ga0530510_0002763 3300061734 Bacteria 12059
189 Ga0114129_10360863
190 JGI25406J46586_10004149
191 JGI25407J50210_10004095
192 Ga0070683_100055811
193 Ga0070683_100207786
194 Ga0070670_100000628
195 Ga0070670_100000896
196 Ga0070691_10069517
197 Ga0070661_100196053
198 Ga0070668_100027175
199 Ga0070675_100063444
200 Ga0070675_100120558
201 Ga0070674_100002694
202 Ga0070673_100023819
203 Ga0070688_100095808
204 Ga0070714_100046476
205 Ga0070700_100063391
206 Ga0070700_100100962
207 Ga0070681_10137218
208 Ga0070699_100004472
209 Ga0068853_100170828
210 Ga0070672_100095211
211 Ga0070686_100071260
212 Ga0068857_100011923
213 Ga0068866_10011746
214 Ga0068870_10004754
215 Ga0068870_10035157
216 Ga0081455_10011561
217 Ga0081455_10017743
218 Ga0081538_10000191
219 Ga0081538_10032260
220 Ga0075364_10030319
221 Ga0075428_100108491
222 Ga0075428_100213800
223 Ga0075430_100007077
224 Ga0075430_100018194
225 Ga0075431_100006895
226 Ga0075433_10027756
227 Ga0075429_100063214
228 Ga0068865_100059647
229 Ga0111539_10022286
230 Ga0111539_10140674
231 Ga0105245_10036601
232 Ga0114129_10188973
233 Ga0105243_10168978
234 Ga0105243_10429205
235 Ga0105242_10037777
236 Ga0105246_10012597
237 Ga0157375_10004070
238 Ga0163163_10019424
239 Ga0157376_10118760
240 Ga0163161_10087385
241 Ga0207688_10000587
242 Ga0207643_10001305
243 Ga0207643_10038884
244 Ga0207650_10001085
245 Ga0207659_10062382
246 Ga0207644_10042188
247 Ga0207706_10119681
248 Ga0207709_10126582
249 Ga0207691_10058447
250 Ga0207691_10095815
251 Ga0207689_10209681
252 Ga0207661_10036169
253 Ga0207661_10036437
254 Ga0207661_10069836
255 Ga0207661_10087401
256 Ga0207679_10070221
257 Ga0207651_10053508
258 Ga0207678_10203186
259 Ga0207708_10004042
260 Ga0207708_10084090
261 Ga0207674_10099001
262 Ga0207675_100114510
263 Ga0207683_10043365
264 Ga0207683_10043675
265 Ga0207683_10086359
266 Ga0207683_10127778
267 Ga0207698_10226762
268 Ga0207428_10004291
269 Ga0207428_10113859
270 Ga0207428_10133245
271 Ga0268266_10243330
272 Ga0265320_10057428
273 Ga0307413_10043294
274 Ga0307406_10051591
275 Ga0307412_10040324
276 Ga0307416_100088759
277 Ga0307416_100195027
278 Ga0307415_100012952
279 Ga0307415_100033803
280 Ga0307415_100103021
281 Ga0395899_0107564
282 Ga0395900_0101439
283 Ga0395900_0202915
284 Ga0395898_0003324
285 Ga0395898_0013612
286 Ga0395905_0004871
287 Ga0395905_0016329
288 Ga0395901_0029907
289 Ga0395901_0061792
290 Ga0436360_0049598
291 Ga0466957_0041959
292 Ga0466958_0031728
293 Ga0466958_0069206
294 Ga0466967_0188370
295 Ga0466967_0350705
296 Ga0495608_0041519
297 Ga0496100_0032208
298 Ga0496100_0206565
299 Ga0496101_0008576
300 Ga0496102_0089408
301 Ga0496102_0117300
302 Ga0496103_0017897
303 Ga0496104_0141432
304 Ga0496106_0003782
305 Ga0496106_0072384
306 Ga0496107_0010250
307 Ga0496107_0054117
308 Ga0496108_0001138
309 Ga0496108_0023589
310 Ga0496108_0066567
311 Ga0496109_0001955
312 Ga0496109_0020749
313 Ga0496109_0306643
314 Ga0496110_0002051
315 Ga0496110_0188637
316 Ga0496112_0044815
317 Ga0496113_0089743
318 Ga0496115_0005270
319 Ga0501031_0006349
320 Ga0501032_0071021
321 Ga0501033_0003061
322 Ga0501033_0118644
323 Ga0501034_0079036
324 Ga0501036_0012419
325 Ga0501036_0051663
326 Ga0501036_0082807
327 Ga0501037_0018088
328 Ga0501038_0007224
329 Ga0501038_0032974
330 Ga0501039_0006616
331 Ga0501039_0012464
332 Ga0501040_0021551
333 Ga0501042_0009859
334 Ga0501042_0077061
335 Ga0501042_0095606
336 Ga0501046_0100740
337 Ga0501068_0003963
338 Ga0501068_0005035
339 Ga0501068_0013802
340 Ga0501069_0000502
341 Ga0501070_0008189
342 Ga0501072_0007023
343 Ga0501072_0017315
344 Ga0501073_0141755
345 Ga0501074_0003187
346 Ga0501074_0086805
347 Ga0501075_0020311
348 Ga0501076_0038123
349 Ga0501076_0189844
350 Ga0501076_0328940
351 Ga0501077_0030030
352 Ga0501077_0055184
353 Ga0501080_0272705
354 Ga0501081_0055807
355 Ga0501083_0009962
356 Ga0501035_0003088
357 Ga0501035_0057436
358 Ga0501045_0007232
359 Ga0501045_0038167
360 nmdc:mga03683_45710_c1
361 nmdc:mga00v17_71214_c1
362 nmdc:mga05p37_347026_c1
363 nmdc:mga05p37_35357_c1
364 nmdc:mga09592_127445_c1
365 nmdc:mga09592_59971_c1
366 nmdc:mga0qj67_167027_c1
367 nmdc:mga0qj67_65132_c1
368 nmdc:mga06r32_39814_c1
369 nmdc:mga08y16_185353_c1
370 nmdc:mga08y16_353692_c1
371 nmdc:mga0a205_244838_c1
372 Ga0501084_0007596
373 Ga0501084_0126275
374 Ga0501084_0131272
375 Ga0501082_0017577
376 Ga0530510_0002763

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07690

MFS_1

Major Facilitator Superfamily

25

417

0.89

PF07690

MFS_1

Major Facilitator Superfamily

276

477

0.88

PF00083

Sugar_tr

Sugar (and other) transporter

16

198

0.8

Structural Annotation

Top 5 Hits

ID Description Score Start End
7y58-assembly1.cif.gz_A cryoem structure of qaca (d411n), an antibacterial efflux transporter from staphylococcus aureus 0.9246 1 451
7y58-assembly1.cif.gz_A cryoem structure of qaca (d411n), an antibacterial efflux transporter from staphylococcus aureus 0.8962 1 451
8pnl-assembly1.cif.gz_A outward-open conformation of a major facilitator superfamily (mfs) transporter mhas2168, a homologue of rv1410 from m. tuberculosis, in complex with an alpaca nanobody 0.8474 4 448
7d5q-assembly2.cif.gz_B structure of norc transporter (k398a mutant) in an outward-open conformation in complex with a single-chain indian camelid antibody 0.8457 4 448
7d5p-assembly1.cif.gz_A structure of norc transporter in an outward-open conformation in complex with a single-chain indian camelid antibody 0.8403 1 448
ID Description Score Start End Superfamily
af_P36554_12_217_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9674 10 204 1.20.1250.20
af_Q2FW85_14_250_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9558 8 239 1.20.1250.20
af_P9WG89_46_282_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9501 10 239 1.20.1250.20
af_P76269_18_258_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9454 6 247 1.20.1250.20
af_P31474_14_249_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9452 10 244 1.20.1250.20
ID Description Score Start End GO Terms
AF-A0A537NMT5-F1-model_v4 MFS transporter 0.9734 7 157 GO:0005886
GO:0022857
AF-C0XND7-F1-model_v4 Drug resistance transporter, EmrB/QacA family 0.973 4 176 GO:0005886
GO:0022857
AF-A0A3S1U0X0-F1-model_v4 MFS transporter 0.968 13 149 GO:0005886
GO:0022857
AF-A0A2K2TJ46-F1-model_v4 MFS transporter 0.9657 3 144 GO:0005886
GO:0022857
AF-A0A535LFP1-F1-model_v4 MFS transporter 0.9601 3 115 GO:0016020
GO:0022857

Map