F288834

General Info

Members Datasets Scaffolds Average Seq Length
188 140 376 266

Family's Representative Sequence

Representative Sequence 3300005340|Ga0070689_100010691|Ga0070689_1000106917
Length 280
Sequence MLKSVPPAPHEAPARRVIESTLAGTPLTSGAYETQFTYDPVALMPDVKVLKMGGQSIMDRGRAALFPILDELVAAKDKHKLLLCCGGGTRARHIYAVASELELPTGLLAALGGYVPRQNARMLQMLLANHGGLFMLHDDFEKLPLYFRLGCIPIMTGMPPFGYWEKPTEGGRIPAHRTDAGVFLSAEVLGAKRAIFIKDEDGLFTDDPKKNPSATHIPKIGARELLQRDLGDLVLERIVIEYLQRARFCHELQIVNGMKRGQVTAALEGEDVGSIIYKDT

Samples

Sample ID Description Type Environment
1 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
8 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
9 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
10 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
11 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
12 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
13 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
14 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
15 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
16 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
17 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
18 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
19 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
20 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
21 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
22 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
23 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
24 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
25 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
26 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
27 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
28 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
29 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
30 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
31 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
32 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
33 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
34 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
35 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
36 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
37 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
38 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
39 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
40 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
41 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
42 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
66 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
68 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
69 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
70 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
71 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
72 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
73 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
74 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
75 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
76 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
77 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
78 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
79 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
80 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
81 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
82 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
83 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
84 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
85 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
86 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
87 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
88 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
89 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
90 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
91 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
92 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
93 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
94 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
95 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
96 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
97 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
98 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
99 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
100 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
101 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
102 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
103 3300049515 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_B_5_drought Metagenome Rhizosphere
104 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
105 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
106 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
107 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
108 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
109 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
110 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
111 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
112 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
113 3300049660 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D2_B_0_control Metagenome Rhizosphere
114 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
115 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
116 3300049667 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G5_B_2_control Metagenome Rhizosphere
117 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
118 3300049706 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_B_2_control Metagenome Rhizosphere
119 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
120 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
121 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
122 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
123 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
124 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
125 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
126 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
127 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
128 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
129 3300053102 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere Metagenome Endosphere
130 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
131 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
132 3300053120 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 endosphere Metagenome Endosphere
133 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
134 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
135 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
136 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
137 3300053159 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 endosphere Metagenome Endosphere
138 3300053163 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 endosphere Metagenome Endosphere
139 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
140 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.51
Nodule 0
Rhizoplane 0.53
Rhizosphere 84.57
Stem 0
Stem Tuber 0
Unclassified 3.72

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070689_100010691 3300005340 Bacteria 6550
2 Ga0070658_10321354 3300005327 Bacteria 1322
3 Ga0070683_100090522 3300005329 Bacteria 2872
4 Ga0070690_100003149 3300005330 Bacteria 8984
5 Ga0070690_100064219 3300005330 Bacteria 2371
6 Ga0068869_100342170 3300005334 Bacteria 1217
7 Ga0070680_100241811 3300005336 Bacteria 1526
8 Ga0070680_100393589 3300005336 Bacteria 1181
9 Ga0070682_100245492 3300005337 Bacteria 1288
10 Ga0070689_100006625 3300005340 Bacteria 8042
11 Ga0070689_100025322 3300005340 Bacteria 4456
12 Ga0070689_100094102 3300005340 Bacteria 2366
13 Ga0070689_100192738 3300005340 Bacteria 1660
14 Ga0070689_100379692 3300005340 Bacteria 1191
15 Ga0070675_100601920 3300005354 Bacteria 997
16 Ga0070688_100344130 3300005365 Bacteria 1090
17 Ga0070701_10234959 3300005438 Bacteria 1100
18 Ga0070678_100011652 3300005456 Bacteria 5433
19 Ga0070681_10022176 3300005458 Bacteria 6374
20 Ga0070681_10109632 3300005458 Bacteria 2700
21 Ga0070706_100112731 3300005467 Bacteria 2532
22 Ga0070706_100130574 3300005467 Bacteria 2344
23 Ga0070707_100063059 3300005468 Bacteria 3557
24 Ga0070698_100001450 3300005471 Bacteria 26330
25 Ga0070679_100005445 3300005530 Bacteria 11803
26 Ga0070679_100039509 3300005530 Bacteria 4690
27 Ga0070679_100215107 3300005530 Bacteria 1884
28 Ga0070684_100078358 3300005535 Bacteria 2920
29 Ga0070684_100208571 3300005535 Bacteria 1781
30 Ga0070665_100100116 3300005548 Bacteria 2902
31 Ga0070704_100025760 3300005549 Bacteria 3876
32 Ga0068856_100094509 3300005614 Bacteria 2976
33 Ga0070702_100194636 3300005615 Bacteria 1337
34 Ga0068859_100242803 3300005617 Bacteria 1890
35 Ga0070717_10011372 3300006028 Bacteria 6755
36 Ga0097621_100444699 3300006237 Bacteria 1167
37 Ga0075428_100251199 3300006844 Bacteria 1906
38 Ga0075428_100347889 3300006844 Bacteria 1591
39 Ga0075430_100016712 3300006846 Bacteria 6250
40 Ga0075431_100228421 3300006847 Bacteria 1897
41 Ga0075431_100228608 3300006847 Bacteria 1896
42 Ga0097620_100242805 3300006931 Bacteria 1890
43 Ga0075435_100035776 3300007076 Bacteria 3942
44 Ga0111539_10001027 3300009094 Bacteria 36586
45 Ga0105245_10000072 3300009098 Bacteria 105617
46 Ga0105242_10374877 3300009176 Bacteria 1321
47 Ga0105248_10515112 3300009177 Bacteria 1349
48 Ga0105237_10190941 3300009545 Bacteria 2048
49 Ga0105249_10006884 3300009553 Bacteria 9910
50 Ga0105249_10057839 3300009553 Unclassified 3553
51 Ga0105249_10102679 3300009553 Unclassified 2692
52 Ga0157374_10002034 3300013296 Bacteria 16983
53 Ga0157374_10169654 3300013296 Unclassified 2128
54 Ga0157378_10381007 3300013297 Bacteria 1385
55 Ga0157372_10135794 3300013307 Bacteria 2832
56 Ga0163163_10342117 3300014325 Bacteria 1551
57 Ga0157379_10824254 3300014968 Bacteria 877
58 Ga0213874_10041058 3300021377 Bacteria 1384
59 Ga0207642_10254347 3300025899 Bacteria 998
60 Ga0207684_10004440 3300025910 Bacteria 13222
61 Ga0207684_10031302 3300025910 Bacteria 4526
62 Ga0207684_10094041 3300025910 Bacteria 2556
63 Ga0207707_10112969 3300025912 Bacteria 2374
64 Ga0207707_10209404 3300025912 Bacteria 1699
65 Ga0207660_10069897 3300025917 Bacteria 2551
66 Ga0207662_10166785 3300025918 Bacteria 1410
67 Ga0207652_10005469 3300025921 Bacteria 10309
68 Ga0207652_10066400 3300025921 Bacteria 3126
69 Ga0207646_10035426 3300025922 Bacteria 4508
70 Ga0207681_10450036 3300025923 Bacteria 1048
71 Ga0207687_10003196 3300025927 Bacteria 11101
72 Ga0207670_10011483 3300025936 Bacteria 5146
73 Ga0207670_10045771 3300025936 Bacteria 2902
74 Ga0207670_10120820 3300025936 Bacteria 1904
75 Ga0207670_10126308 3300025936 Bacteria 1867
76 Ga0207669_10073916 3300025937 Bacteria 2153
77 Ga0207689_10026209 3300025942 Bacteria 4882
78 Ga0207661_10044977 3300025944 Bacteria 3492
79 Ga0207661_10502551 3300025944 Bacteria 1108
80 Ga0207667_10397363 3300025949 Bacteria 1404
81 Ga0207712_10038743 3300025961 Unclassified 3261
82 Ga0207712_10089131 3300025961 Bacteria 2267
83 Ga0207677_10469996 3300026023 Bacteria 1081
84 Ga0207708_10162375 3300026075 Bacteria 1765
85 Ga0207702_10228264 3300026078 Bacteria 1738
86 Ga0207702_10353638 3300026078 Bacteria 1406
87 Ga0207702_10446995 3300026078 Bacteria 1253
88 Ga0207641_10361577 3300026088 Bacteria 1386
89 Ga0207648_10580243 3300026089 Bacteria 1032
90 Ga0207676_10521550 3300026095 Bacteria 1131
91 Ga0207675_100133068 3300026118 Bacteria 2358
92 Ga0207683_10021484 3300026121 Bacteria 5526
93 Ga0207683_10092802 3300026121 Bacteria 2690
94 Ga0207428_10023942 3300027907 Bacteria 5129
95 Ga0268266_10471933 3300028379 Bacteria 1195
96 Ga0307515_10006155 3300028794 Bacteria 24118
97 Ga0265338_10083161 3300028800 Bacteria 2678
98 Ga0265338_10221396 3300028800 Bacteria 1413
99 Ga0307511_10184612 3300030521 Unclassified 1116
100 Ga0265332_10028418 3300031238 Bacteria 2448
101 Ga0307513_10139192 3300031456 Unclassified 2356
102 Ga0307509_10008092 3300031507 Bacteria 13497
103 Ga0307509_10063180 3300031507 Bacteria 3899
104 Ga0307509_10162578 3300031507 Bacteria 2127
105 Ga0307508_10311249 3300031616 Bacteria 1167
106 Ga0307516_10012519 3300031730 Bacteria 9134
107 Ga0307406_10005820 3300031901 Bacteria 6756
108 Ga0307409_100599311 3300031995 Unclassified 1089
109 Ga0307409_100628521 3300031995 Bacteria 1065
110 Ga0307416_100522042 3300032002 Bacteria 1256
111 Ga0307415_100032665 3300032126 Bacteria 3369
112 Ga0307415_100688502 3300032126 Bacteria 921
113 Ga0307507_10065186 3300033179 Bacteria 3352
114 Ga0373949_0000147 3300035090 Bacteria 26681
115 Ga0373936_0000009 3300035113 Bacteria 263478
116 Ga0373939_0025151 3300035114 Bacteria 1666
117 Ga0373941_0003468 3300035115 Bacteria 3574
118 Ga0373961_0000132 3300035241 Bacteria 38247
119 Ga0373937_0098624 3300036401 Bacteria 2710
120 Ga0395899_0018639 3300037312 Bacteria 5273
121 Ga0395900_0030601 3300037418 Bacteria 5527
122 Ga0395900_0178093 3300037418 Bacteria 2162
123 Ga0395898_0384022 3300037466 Bacteria 1339
124 Ga0395905_0057237 3300037471 Bacteria 3647
125 Ga0395905_0196169 3300037471 Bacteria 1893
126 Ga0436365_0486137 3300039437 Bacteria 3032
127 Ga0436363_0548853 3300039450 Bacteria 2420
128 Ga0451577_0429138 3300042876 Bacteria 1200
129 Ga0453684_0873988 3300044712 Bacteria 964
130 Ga0466959_0227789 3300045049 Bacteria 1291
131 Ga0451576_0561760 3300045051 Bacteria 1199
132 Ga0495651_0070123 3300046462 Bacteria 2668
133 Ga0495650_0131470 3300046471 Bacteria 912
134 Ga0495622_0098606 3300046557 Bacteria 1340
135 Ga0495613_0055382 3300046689 Bacteria 2914
136 Ga0495686_0007182 3300047472 Bacteria 8387
137 Ga0495686_0036294 3300047472 Bacteria 3164
138 Ga0495602_0272975 3300048088 Bacteria 1249
139 Ga0496104_0241486 3300048907 Bacteria 1719
140 Ga0501292_001203 3300049515 Bacteria 3185
141 Ga0501034_0092242 3300049571 Bacteria 3026
142 Ga0501034_0180975 3300049571 Bacteria 2073
143 Ga0501036_0207346 3300049572 Bacteria 1648
144 Ga0501043_0266830 3300049579 Bacteria 1315
145 Ga0501043_0535964 3300049579 Bacteria 871
146 Ga0501047_0005909 3300049581 Bacteria 11514
147 Ga0501047_0050026 3300049581 Bacteria 4035
148 Ga0501048_0351914 3300049582 Bacteria 1051
149 Ga0501070_0045083 3300049586 Bacteria 3668
150 Ga0501070_0074941 3300049586 Bacteria 2801
151 Ga0501070_0148625 3300049586 Bacteria 1933
152 Ga0501070_0151956 3300049586 Bacteria 1910
153 Ga0501072_0312749 3300049588 Bacteria 1248
154 Ga0501074_0025478 3300049590 Bacteria 4296
155 Ga0501077_0281432 3300049593 Bacteria 1059
156 Ga0501216_001827 3300049660 Bacteria 2934
157 Ga0501217_041505 3300049661 Bacteria 1173
158 Ga0501227_000405 3300049665 Bacteria 9137
159 Ga0501230_000665 3300049667 Bacteria 3652
160 Ga0501225_0002129 3300049705 Bacteria 6140
161 Ga0501229_002235 3300049706 Bacteria 2275
162 Ga0501081_0385126 3300049743 Bacteria 1037
163 Ga0501083_0054927 3300049744 Bacteria 2671
164 Ga0501044_0234211 3300049823 Bacteria 1782
165 nmdc:mga0qj67_18013_c1 3300050509 Bacteria 5379
166 nmdc:mga0qj67_505708_c1 3300050509 Bacteria 971
167 nmdc:mga06r32_19610_c1 3300050510 Bacteria 6210
168 nmdc:mga06r32_321253_c1 3300050510 Bacteria 1533
169 nmdc:mga08y16_24990_c1 3300050511 Bacteria 6302
170 nmdc:mga0rr50_17135_c1 3300050513 Bacteria 4828
171 Ga0495619_0280397 3300053085 Bacteria 1155
172 Ga0500583_0061834 3300053092 Bacteria 1769
173 Ga0500640_008950 3300053095 Bacteria 3981
174 Ga0500554_000050 3300053102 Bacteria 20889
175 Ga0500572_012464 3300053111 Bacteria 2084
176 Ga0500595_000017 3300053119 Bacteria 206032
177 Ga0500597_019289 3300053120 Bacteria 2659
178 Ga0500614_000035 3300053123 Bacteria 30070
179 Ga0500614_011180 3300053123 Bacteria 1939
180 Ga0500642_0024299 3300053130 Bacteria 2447
181 Ga0500642_0027818 3300053130 Bacteria 2325
182 Ga0500559_0000792 3300053136 Bacteria 20636
183 Ga0500568_0002656 3300053139 Bacteria 10383
184 Ga0500568_0021003 3300053139 Bacteria 2816
185 Ga0500630_095530 3300053159 Bacteria 1364
186 Ga0500639_076849 3300053163 Bacteria 1689
187 Ga0500636_0218530 3300053177 Bacteria 995
188 Ga0501082_0236942 3300060353 Bacteria 1588
189 Ga0070689_100010691
190 Ga0070658_10321354
191 Ga0070683_100090522
192 Ga0070690_100003149
193 Ga0070690_100064219
194 Ga0068869_100342170
195 Ga0070680_100241811
196 Ga0070680_100393589
197 Ga0070682_100245492
198 Ga0070689_100006625
199 Ga0070689_100025322
200 Ga0070689_100094102
201 Ga0070689_100192738
202 Ga0070689_100379692
203 Ga0070675_100601920
204 Ga0070688_100344130
205 Ga0070701_10234959
206 Ga0070678_100011652
207 Ga0070681_10022176
208 Ga0070681_10109632
209 Ga0070706_100112731
210 Ga0070706_100130574
211 Ga0070707_100063059
212 Ga0070698_100001450
213 Ga0070679_100005445
214 Ga0070679_100039509
215 Ga0070679_100215107
216 Ga0070684_100078358
217 Ga0070684_100208571
218 Ga0070665_100100116
219 Ga0070704_100025760
220 Ga0068856_100094509
221 Ga0070702_100194636
222 Ga0068859_100242803
223 Ga0070717_10011372
224 Ga0097621_100444699
225 Ga0075428_100251199
226 Ga0075428_100347889
227 Ga0075430_100016712
228 Ga0075431_100228421
229 Ga0075431_100228608
230 Ga0097620_100242805
231 Ga0075435_100035776
232 Ga0111539_10001027
233 Ga0105245_10000072
234 Ga0105242_10374877
235 Ga0105248_10515112
236 Ga0105237_10190941
237 Ga0105249_10006884
238 Ga0105249_10057839
239 Ga0105249_10102679
240 Ga0157374_10002034
241 Ga0157374_10169654
242 Ga0157378_10381007
243 Ga0157372_10135794
244 Ga0163163_10342117
245 Ga0157379_10824254
246 Ga0213874_10041058
247 Ga0207642_10254347
248 Ga0207684_10004440
249 Ga0207684_10031302
250 Ga0207684_10094041
251 Ga0207707_10112969
252 Ga0207707_10209404
253 Ga0207660_10069897
254 Ga0207662_10166785
255 Ga0207652_10005469
256 Ga0207652_10066400
257 Ga0207646_10035426
258 Ga0207681_10450036
259 Ga0207687_10003196
260 Ga0207670_10011483
261 Ga0207670_10045771
262 Ga0207670_10120820
263 Ga0207670_10126308
264 Ga0207669_10073916
265 Ga0207689_10026209
266 Ga0207661_10044977
267 Ga0207661_10502551
268 Ga0207667_10397363
269 Ga0207712_10038743
270 Ga0207712_10089131
271 Ga0207677_10469996
272 Ga0207708_10162375
273 Ga0207702_10228264
274 Ga0207702_10353638
275 Ga0207702_10446995
276 Ga0207641_10361577
277 Ga0207648_10580243
278 Ga0207676_10521550
279 Ga0207675_100133068
280 Ga0207683_10021484
281 Ga0207683_10092802
282 Ga0207428_10023942
283 Ga0268266_10471933
284 Ga0307515_10006155
285 Ga0265338_10083161
286 Ga0265338_10221396
287 Ga0307511_10184612
288 Ga0265332_10028418
289 Ga0307513_10139192
290 Ga0307509_10008092
291 Ga0307509_10063180
292 Ga0307509_10162578
293 Ga0307508_10311249
294 Ga0307516_10012519
295 Ga0307406_10005820
296 Ga0307409_100599311
297 Ga0307409_100628521
298 Ga0307416_100522042
299 Ga0307415_100032665
300 Ga0307415_100688502
301 Ga0307507_10065186
302 Ga0373949_0000147
303 Ga0373936_0000009
304 Ga0373939_0025151
305 Ga0373941_0003468
306 Ga0373961_0000132
307 Ga0373937_0098624
308 Ga0395899_0018639
309 Ga0395900_0030601
310 Ga0395900_0178093
311 Ga0395898_0384022
312 Ga0395905_0057237
313 Ga0395905_0196169
314 Ga0436365_0486137
315 Ga0436363_0548853
316 Ga0451577_0429138
317 Ga0453684_0873988
318 Ga0466959_0227789
319 Ga0451576_0561760
320 Ga0495651_0070123
321 Ga0495650_0131470
322 Ga0495622_0098606
323 Ga0495613_0055382
324 Ga0495686_0007182
325 Ga0495686_0036294
326 Ga0495602_0272975
327 Ga0496104_0241486
328 Ga0501292_001203
329 Ga0501034_0092242
330 Ga0501034_0180975
331 Ga0501036_0207346
332 Ga0501043_0266830
333 Ga0501043_0535964
334 Ga0501047_0005909
335 Ga0501047_0050026
336 Ga0501048_0351914
337 Ga0501070_0045083
338 Ga0501070_0074941
339 Ga0501070_0148625
340 Ga0501070_0151956
341 Ga0501072_0312749
342 Ga0501074_0025478
343 Ga0501077_0281432
344 Ga0501216_001827
345 Ga0501217_041505
346 Ga0501227_000405
347 Ga0501230_000665
348 Ga0501225_0002129
349 Ga0501229_002235
350 Ga0501081_0385126
351 Ga0501083_0054927
352 Ga0501044_0234211
353 nmdc:mga0qj67_18013_c1
354 nmdc:mga0qj67_505708_c1
355 nmdc:mga06r32_19610_c1
356 nmdc:mga06r32_321253_c1
357 nmdc:mga08y16_24990_c1
358 nmdc:mga0rr50_17135_c1
359 Ga0495619_0280397
360 Ga0500583_0061834
361 Ga0500640_008950
362 Ga0500554_000050
363 Ga0500572_012464
364 Ga0500595_000017
365 Ga0500597_019289
366 Ga0500614_000035
367 Ga0500614_011180
368 Ga0500642_0024299
369 Ga0500642_0027818
370 Ga0500559_0000792
371 Ga0500568_0002656
372 Ga0500568_0021003
373 Ga0500630_095530
374 Ga0500639_076849
375 Ga0500636_0218530
376 Ga0501082_0236942

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00696

AA_kinase

Amino acid kinase family

46

256

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
6h6w-assembly1.cif.gz_A-3 molybdenum storage protein- h156a 0.8185 31 270
6rke-assembly1.cif.gz_A molybdenum storage protein - p212121, adp, molybdate 0.8153 32 270
6ris-assembly1.cif.gz_B the kb42s variant of the molybdenum storage protein 0.8148 14 271
6gwv-assembly2.cif.gz_J molybdenum storage protein without polymolybdate clusters and atp 0.812 31 270
6yt3-assembly1.cif.gz_B structure of the mostonano fusion protein 0.8105 14 271
ID Description Score Start End Superfamily
2ogxA00 Alpha Beta;3-Layer(aba) Sandwich;Carbamate kinase;Acetylglutamate kinase-like 0.8081 32 270 3.40.1160.10
2ogxA00 Alpha Beta;3-Layer(aba) Sandwich;Carbamate kinase;Acetylglutamate kinase-like 0.78 32 270 3.40.1160.10
2ogxB00 Alpha Beta;3-Layer(aba) Sandwich;Carbamate kinase;Acetylglutamate kinase-like 0.7712 12 271 3.40.1160.10
2ogxB00 Alpha Beta;3-Layer(aba) Sandwich;Carbamate kinase;Acetylglutamate kinase-like 0.7381 12 271 3.40.1160.10
2j4jC00 Alpha Beta;3-Layer(aba) Sandwich;Carbamate kinase;Acetylglutamate kinase-like 0.7239 42 271 3.40.1160.10
ID Description Score Start End GO Terms
AF-A0A537T700-F1-model_v4 Uridine kinase 0.9762 177 270 GO:0016301
AF-A0A1E7IQT1-F1-model_v4 Aspartate/glutamate/uridylate kinase domain-containing protein 0.9749 178 269
AF-A0A846ZXA9-F1-model_v4 Aspartate/glutamate/uridylate kinase domain-containing protein 0.9732 176 271
AF-A0A849Z7D8-F1-model_v4 Uridine kinase 0.9716 163 271 GO:0016301
AF-A0A537T700-F1-model_v4 Uridine kinase 0.9563 177 270 GO:0016301

Map