F288809

General Info

Members Datasets Scaffolds Average Seq Length
188 123 376 369

Family's Representative Sequence

Representative Sequence 3300005336|Ga0070680_100162710|Ga0070680_1001627103
Length 385
Sequence MIQEEILKRIHMNHKKRQFMQKQIFLLFIAFQLFSMNTFTQFHKNKISVIAYYAGDAKSVDEYPIEKLTHIIYSFCHLKGNELAVDNDDDAETIRHLVSLKKRNPSLKVILSLGGWGGCKTCSEVFSTEEGRKEFAQSAKDLCEKYKTDGIDLDWEYPAIEGYPGHQYLPEDKHNFTLLIQALRTTLGDKYEISFAAGGFTKFLTQSIEWNAVMPFVDRVNLMTYDLINGYSTVTGHHTPLYSTPEQIESTDHAVKYLDSIGVSKNKMVIGAAFYTRIFAVDSNSTSNNGLYQPCKFEKGVSHKQFDVKSYELQGYTYYWDDTAKAPYMYNPETKRFCTFDDERSLALKTKYAIDQKLDGIMFWQLADDNADHDLLNAIDKVAHQ

Samples

Sample ID Description Type Environment
1 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
4 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
5 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
8 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
9 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
10 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
11 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
12 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
13 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
14 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
15 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
16 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
17 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
18 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
19 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
20 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
21 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
22 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
23 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
24 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
25 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
26 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
27 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
28 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
29 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
30 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
31 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
32 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
33 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
34 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
35 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
36 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
37 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
38 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
39 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
40 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
41 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
42 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
43 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
44 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
45 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
46 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
47 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
48 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
49 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
50 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
51 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
52 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
53 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
54 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
55 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
56 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
88 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
89 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
90 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
91 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
92 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
93 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
94 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
95 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
96 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
97 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
98 3300041460 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG Metagenome Rhizoplane
99 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
100 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
101 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
102 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
103 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
104 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
105 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
106 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
107 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
108 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
109 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
110 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
111 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
112 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
113 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
114 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
115 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
116 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
117 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
118 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
119 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
120 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
121 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
122 3300053727 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 endosphere Metagenome Endosphere
123 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.19
Nodule 0
Rhizoplane 0.53
Rhizosphere 90.43
Stem 0
Stem Tuber 0
Unclassified 5.32

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070680_100162710 3300005336 Bacteria 1876
2 JGI25406J46586_10005229 3300003203 Bacteria 6017
3 rootH1_10079016 3300003316 Bacteria 2769
4 rootH2_10234016 3300003320 Bacteria 1637
5 rootL2_10020385 3300003322 Bacteria 4818
6 rootL2_10324932 3300003322 Bacteria 1360
7 Ga0070683_100030108 3300005329 Bacteria 4922
8 Ga0070683_100060193 3300005329 Bacteria 3529
9 Ga0070683_100116223 3300005329 Bacteria 2525
10 Ga0070683_100277480 3300005329 Bacteria 1594
11 Ga0068869_100044507 3300005334 Bacteria 3192
12 Ga0070666_10000133 3300005335 Bacteria 51612
13 Ga0070666_10030362 3300005335 Bacteria 3560
14 Ga0070680_100025798 3300005336 Bacteria 4699
15 Ga0068868_100025554 3300005338 Bacteria 4494
16 Ga0068868_100036709 3300005338 Bacteria 3796
17 Ga0070660_100014782 3300005339 Bacteria 5631
18 Ga0070660_100049412 3300005339 Bacteria 3233
19 Ga0070661_100004021 3300005344 Bacteria 10109
20 Ga0070675_100051016 3300005354 Bacteria 3399
21 Ga0070673_100380525 3300005364 Bacteria 1258
22 Ga0070667_100019475 3300005367 Bacteria 5631
23 Ga0070663_100003055 3300005455 Bacteria 9570
24 Ga0070663_100140497 3300005455 Bacteria 1843
25 Ga0070663_100195083 3300005455 Bacteria 1578
26 Ga0070678_100206454 3300005456 Bacteria 1625
27 Ga0070681_10027227 3300005458 Bacteria 5748
28 Ga0070679_100005245 3300005530 Bacteria 11995
29 Ga0070679_100031741 3300005530 Bacteria 5222
30 Ga0070679_100081491 3300005530 Bacteria 3225
31 Ga0070684_100002223 3300005535 Bacteria 14311
32 Ga0070684_100215706 3300005535 Bacteria 1750
33 Ga0070672_100125872 3300005543 Bacteria 2102
34 Ga0070665_100411137 3300005548 Bacteria 1361
35 Ga0068855_100000424 3300005563 Bacteria 52152
36 Ga0068855_100064187 3300005563 Bacteria 4282
37 Ga0068855_100499348 3300005563 Bacteria 1322
38 Ga0070664_100065779 3300005564 Bacteria 3094
39 Ga0068857_100056143 3300005577 Bacteria 3495
40 Ga0068854_100256945 3300005578 Bacteria 1397
41 Ga0068856_100121113 3300005614 Bacteria 2618
42 Ga0068856_100164225 3300005614 Bacteria 2231
43 Ga0068852_100023988 3300005616 Bacteria 4921
44 Ga0068852_100070842 3300005616 Bacteria 3059
45 Ga0068859_100000023 3300005617 Bacteria 221914
46 Ga0068859_100250342 3300005617 Bacteria 1862
47 Ga0068864_100008973 3300005618 Bacteria 8244
48 Ga0068851_10015247 3300005834 Bacteria 3660
49 Ga0068851_10080738 3300005834 Bacteria 1698
50 Ga0068863_100000424 3300005841 Bacteria 42794
51 Ga0068863_100049112 3300005841 Bacteria 4001
52 Ga0068858_100002164 3300005842 Bacteria 19931
53 Ga0068860_100071239 3300005843 Bacteria 3304
54 Ga0068860_100091738 3300005843 Bacteria 2894
55 Ga0068862_100023898 3300005844 Bacteria 5123
56 Ga0081539_10000389 3300005985 Bacteria 94754
57 Ga0097621_100029299 3300006237 Bacteria 4347
58 Ga0068871_100020593 3300006358 Bacteria 5055
59 Ga0068871_100023479 3300006358 Bacteria 4772
60 Ga0097620_100000023 3300006931 Bacteria 221914
61 Ga0097620_100250344 3300006931 Bacteria 1862
62 Ga0105240_10078843 3300009093 Bacteria 4054
63 Ga0105247_10004174 3300009101 Bacteria 9269
64 Ga0105241_10000527 3300009174 Bacteria 28775
65 Ga0105237_10011764 3300009545 Bacteria 9257
66 Ga0105249_10008664 3300009553 Bacteria 8860
67 Ga0157371_10008739 3300013102 Bacteria 8036
68 Ga0157371_10024868 3300013102 Bacteria 4369
69 Ga0157371_10171527 3300013102 Bacteria 1550
70 Ga0157370_10000526 3300013104 Bacteria 47828
71 Ga0157370_10017618 3300013104 Bacteria 7204
72 Ga0157369_10055947 3300013105 Bacteria 4257
73 Ga0157369_10065062 3300013105 Bacteria 3926
74 Ga0157369_10088824 3300013105 Bacteria 3300
75 Ga0157369_10396783 3300013105 Bacteria 1431
76 Ga0157374_10050827 3300013296 Bacteria 3854
77 Ga0157374_10056304 3300013296 Bacteria 3670
78 Ga0157378_10007583 3300013297 Bacteria 9474
79 Ga0157378_10038325 3300013297 Bacteria 4248
80 Ga0157378_10289093 3300013297 Bacteria 1583
81 Ga0163162_10598209 3300013306 Bacteria 1229
82 Ga0157372_10029331 3300013307 Bacteria 6006
83 Ga0157372_10047671 3300013307 Bacteria 4762
84 Ga0157372_10075914 3300013307 Bacteria 3793
85 Ga0157372_10123896 3300013307 Unclassified 2971
86 Ga0157372_10156093 3300013307 Unclassified 2636
87 Ga0157372_10182353 3300013307 Unclassified 2430
88 Ga0157375_10082199 3300013308 Bacteria 3262
89 Ga0163163_10080894 3300014325 Bacteria 3250
90 Ga0157380_10010683 3300014326 Bacteria 6614
91 Ga0157376_10041050 3300014969 Bacteria 3786
92 Ga0213876_10012471 3300021384 Bacteria 4524
93 Ga0207656_10066726 3300025321 Bacteria 1591
94 Ga0207680_10000373 3300025903 Bacteria 21488
95 Ga0207647_10074772 3300025904 Bacteria 2040
96 Ga0207647_10114701 3300025904 Bacteria 1591
97 Ga0207705_10023167 3300025909 Bacteria 4429
98 Ga0207654_10005624 3300025911 Bacteria 6337
99 Ga0207707_10044667 3300025912 Bacteria 3862
100 Ga0207695_10000130 3300025913 Bacteria 224214
101 Ga0207671_10006442 3300025914 Bacteria 10450
102 Ga0207660_10003236 3300025917 Bacteria 10658
103 Ga0207660_10016744 3300025917 Bacteria 4860
104 Ga0207657_10003020 3300025919 Bacteria 18018
105 Ga0207657_10006687 3300025919 Bacteria 11919
106 Ga0207652_10000346 3300025921 Bacteria 48060
107 Ga0207652_10075523 3300025921 Unclassified 2937
108 Ga0207652_10082657 3300025921 Bacteria 2810
109 Ga0207650_10082624 3300025925 Bacteria 2439
110 Ga0207650_10147508 3300025925 Bacteria 1854
111 Ga0207650_10240730 3300025925 Bacteria 1462
112 Ga0207659_10075937 3300025926 Bacteria 2468
113 Ga0207644_10068675 3300025931 Bacteria 2586
114 Ga0207690_10087583 3300025932 Bacteria 2191
115 Ga0207691_10063196 3300025940 Bacteria 3358
116 Ga0207689_10040843 3300025942 Bacteria 3838
117 Ga0207689_10055963 3300025942 Bacteria 3246
118 Ga0207661_10013429 3300025944 Bacteria 5982
119 Ga0207661_10183454 3300025944 Bacteria 1830
120 Ga0207661_10218331 3300025944 Bacteria 1684
121 Ga0207667_10004780 3300025949 Bacteria 16560
122 Ga0207667_10025266 3300025949 Bacteria 6504
123 Ga0207667_10086366 3300025949 Bacteria 3246
124 Ga0207712_10007527 3300025961 Bacteria 6878
125 Ga0207640_10093491 3300025981 Bacteria 2089
126 Ga0207658_10004926 3300025986 Bacteria 9210
127 Ga0207658_10068048 3300025986 Bacteria 2685
128 Ga0207677_10029541 3300026023 Unclassified 3485
129 Ga0207677_10155111 3300026023 Bacteria 1772
130 Ga0207703_10001211 3300026035 Bacteria 24154
131 Ga0207639_10311202 3300026041 Bacteria 1395
132 Ga0207678_10019563 3300026067 Bacteria 5951
133 Ga0207678_10153186 3300026067 Bacteria 1969
134 Ga0207702_10109413 3300026078 Bacteria 2454
135 Ga0207702_10235070 3300026078 Bacteria 1714
136 Ga0207641_10000250 3300026088 Bacteria 68774
137 Ga0207641_10142759 3300026088 Unclassified 2162
138 Ga0207676_10020411 3300026095 Bacteria 4848
139 Ga0268266_10381619 3300028379 Bacteria 1329
140 Ga0268264_10054394 3300028381 Bacteria 3342
141 Ga0307515_10000057 3300028794 Bacteria 261695
142 Ga0265327_10000093 3300031251 Bacteria 195220
143 Ga0307513_10118738 3300031456 Unclassified 2618
144 Ga0307513_10123602 3300031456 Bacteria 2549
145 Ga0307408_100001355 3300031548 Bacteria 18314
146 Ga0307408_100003308 3300031548 Bacteria 11082
147 Ga0307508_10001286 3300031616 Bacteria 28488
148 Ga0307507_10124118 3300033179 Bacteria 2052
149 Ga0395900_0037091 3300037418 Bacteria 5026
150 Ga0395900_0060748 3300037418 Bacteria 3888
151 Ga0395900_0090741 3300037418 Bacteria 3140
152 Ga0395898_0025177 3300037466 Bacteria 6000
153 Ga0395898_0052363 3300037466 Bacteria 3988
154 Ga0395905_0053007 3300037471 Bacteria 3797
155 Ga0395901_0078633 3300038443 Bacteria 3443
156 Ga0436365_1614648 3300039437 Bacteria 17364
157 Ga0451802_1216576 3300041460 Bacteria 1317
158 Ga0439457_013235 3300042014 Bacteria 1855
159 Ga0439434_0003008 3300042435 Bacteria 4940
160 Ga0466972_0064421 3300044658 Bacteria 1754
161 Ga0453684_0602084 3300044712 Unclassified 1204
162 Ga0495686_0010627 3300047472 Bacteria 6537
163 Ga0495686_0023767 3300047472 Unclassified 4036
164 Ga0501032_0002167 3300049569 Bacteria 15454
165 Ga0501034_0032071 3300049571 Bacteria 5337
166 Ga0501034_0079801 3300049571 Bacteria 3276
167 Ga0501037_0051271 3300049573 Bacteria 3018
168 Ga0501038_0029998 3300049574 Bacteria 4814
169 Ga0501043_0017706 3300049579 Bacteria 5586
170 Ga0501046_0001260 3300049580 Bacteria 24521
171 Ga0501046_0179747 3300049580 Unclassified 1583
172 Ga0501047_0033170 3300049581 Bacteria 4984
173 Ga0501047_0112606 3300049581 Bacteria 2603
174 Ga0501047_0145952 3300049581 Bacteria 2243
175 Ga0501048_0049385 3300049582 Bacteria 2998
176 Ga0501070_0054927 3300049586 Bacteria 3302
177 Ga0501074_0003713 3300049590 Bacteria 10827
178 Ga0501080_0102366 3300049742 Bacteria 2656
179 Ga0501083_0003978 3300049744 Bacteria 10378
180 Ga0501035_0005653 3300049822 Bacteria 11803
181 Ga0501044_0029086 3300049823 Bacteria 5828
182 Ga0500578_0000150 3300053086 Bacteria 83541
183 Ga0500578_0018369 3300053086 Bacteria 4493
184 Ga0500583_0001250 3300053092 Bacteria 7261
185 Ga0500616_0053867 3300053153 Bacteria 2109
186 Ga0500622_0015030 3300053156 Bacteria 4151
187 Ga0500611_000033 3300053727 Bacteria 79214
188 Ga0501084_0155470 3300054114 Bacteria 1928
189 Ga0070680_100162710
190 JGI25406J46586_10005229
191 rootH1_10079016
192 rootH2_10234016
193 rootL2_10020385
194 rootL2_10324932
195 Ga0070683_100030108
196 Ga0070683_100060193
197 Ga0070683_100116223
198 Ga0070683_100277480
199 Ga0068869_100044507
200 Ga0070666_10000133
201 Ga0070666_10030362
202 Ga0070680_100025798
203 Ga0068868_100025554
204 Ga0068868_100036709
205 Ga0070660_100014782
206 Ga0070660_100049412
207 Ga0070661_100004021
208 Ga0070675_100051016
209 Ga0070673_100380525
210 Ga0070667_100019475
211 Ga0070663_100003055
212 Ga0070663_100140497
213 Ga0070663_100195083
214 Ga0070678_100206454
215 Ga0070681_10027227
216 Ga0070679_100005245
217 Ga0070679_100031741
218 Ga0070679_100081491
219 Ga0070684_100002223
220 Ga0070684_100215706
221 Ga0070672_100125872
222 Ga0070665_100411137
223 Ga0068855_100000424
224 Ga0068855_100064187
225 Ga0068855_100499348
226 Ga0070664_100065779
227 Ga0068857_100056143
228 Ga0068854_100256945
229 Ga0068856_100121113
230 Ga0068856_100164225
231 Ga0068852_100023988
232 Ga0068852_100070842
233 Ga0068859_100000023
234 Ga0068859_100250342
235 Ga0068864_100008973
236 Ga0068851_10015247
237 Ga0068851_10080738
238 Ga0068863_100000424
239 Ga0068863_100049112
240 Ga0068858_100002164
241 Ga0068860_100071239
242 Ga0068860_100091738
243 Ga0068862_100023898
244 Ga0081539_10000389
245 Ga0097621_100029299
246 Ga0068871_100020593
247 Ga0068871_100023479
248 Ga0097620_100000023
249 Ga0097620_100250344
250 Ga0105240_10078843
251 Ga0105247_10004174
252 Ga0105241_10000527
253 Ga0105237_10011764
254 Ga0105249_10008664
255 Ga0157371_10008739
256 Ga0157371_10024868
257 Ga0157371_10171527
258 Ga0157370_10000526
259 Ga0157370_10017618
260 Ga0157369_10055947
261 Ga0157369_10065062
262 Ga0157369_10088824
263 Ga0157369_10396783
264 Ga0157374_10050827
265 Ga0157374_10056304
266 Ga0157378_10007583
267 Ga0157378_10038325
268 Ga0157378_10289093
269 Ga0163162_10598209
270 Ga0157372_10029331
271 Ga0157372_10047671
272 Ga0157372_10075914
273 Ga0157372_10123896
274 Ga0157372_10156093
275 Ga0157372_10182353
276 Ga0157375_10082199
277 Ga0163163_10080894
278 Ga0157380_10010683
279 Ga0157376_10041050
280 Ga0213876_10012471
281 Ga0207656_10066726
282 Ga0207680_10000373
283 Ga0207647_10074772
284 Ga0207647_10114701
285 Ga0207705_10023167
286 Ga0207654_10005624
287 Ga0207707_10044667
288 Ga0207695_10000130
289 Ga0207671_10006442
290 Ga0207660_10003236
291 Ga0207660_10016744
292 Ga0207657_10003020
293 Ga0207657_10006687
294 Ga0207652_10000346
295 Ga0207652_10075523
296 Ga0207652_10082657
297 Ga0207650_10082624
298 Ga0207650_10147508
299 Ga0207650_10240730
300 Ga0207659_10075937
301 Ga0207644_10068675
302 Ga0207690_10087583
303 Ga0207691_10063196
304 Ga0207689_10040843
305 Ga0207689_10055963
306 Ga0207661_10013429
307 Ga0207661_10183454
308 Ga0207661_10218331
309 Ga0207667_10004780
310 Ga0207667_10025266
311 Ga0207667_10086366
312 Ga0207712_10007527
313 Ga0207640_10093491
314 Ga0207658_10004926
315 Ga0207658_10068048
316 Ga0207677_10029541
317 Ga0207677_10155111
318 Ga0207703_10001211
319 Ga0207639_10311202
320 Ga0207678_10019563
321 Ga0207678_10153186
322 Ga0207702_10109413
323 Ga0207702_10235070
324 Ga0207641_10000250
325 Ga0207641_10142759
326 Ga0207676_10020411
327 Ga0268266_10381619
328 Ga0268264_10054394
329 Ga0307515_10000057
330 Ga0265327_10000093
331 Ga0307513_10118738
332 Ga0307513_10123602
333 Ga0307408_100001355
334 Ga0307408_100003308
335 Ga0307508_10001286
336 Ga0307507_10124118
337 Ga0395900_0037091
338 Ga0395900_0060748
339 Ga0395900_0090741
340 Ga0395898_0025177
341 Ga0395898_0052363
342 Ga0395905_0053007
343 Ga0395901_0078633
344 Ga0436365_1614648
345 Ga0451802_1216576
346 Ga0439457_013235
347 Ga0439434_0003008
348 Ga0466972_0064421
349 Ga0453684_0602084
350 Ga0495686_0010627
351 Ga0495686_0023767
352 Ga0501032_0002167
353 Ga0501034_0032071
354 Ga0501034_0079801
355 Ga0501037_0051271
356 Ga0501038_0029998
357 Ga0501043_0017706
358 Ga0501046_0001260
359 Ga0501046_0179747
360 Ga0501047_0033170
361 Ga0501047_0112606
362 Ga0501047_0145952
363 Ga0501048_0049385
364 Ga0501070_0054927
365 Ga0501074_0003713
366 Ga0501080_0102366
367 Ga0501083_0003978
368 Ga0501035_0005653
369 Ga0501044_0029086
370 Ga0500578_0000150
371 Ga0500578_0018369
372 Ga0500583_0001250
373 Ga0500616_0053867
374 Ga0500622_0015030
375 Ga0500611_000033
376 Ga0501084_0155470

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00704

Glyco_hydro_18

Glycosyl hydrolases family 18

48

369

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
5gzu-assembly1.cif.gz_A crystal structure of chitinase chiw from paenibacillus sp. str. fpu-7 reveals a novel type of bacterial cell-surface-expressed multi-modular enzyme machinery 0.9119 28 363
5gzt-assembly1.cif.gz_B crystal structure of chitinase chiw from paenibacillus sp. str. fpu-7 reveals a novel type of bacterial cell-surface-expressed multi-modular enzyme machinery 0.9079 27 363
6bt9-assembly1.cif.gz_A chitinase chia74 from bacillus thuringiensis 0.9045 27 360
6jmb-assembly1.cif.gz_A crystal structure of ostrinia furnacalis group iv chitinase in complex with allosamidin 0.9029 27 362
6jm8-assembly1.cif.gz_A crystal structure of ostrinia furnacalis group iv chitinase 0.8997 27 363
ID Description Score Start End Superfamily
3aquC01 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.8647 27 362 3.20.20.80
af_A0A0R4IJ02_23_283_3.20.20.80 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.8604 27 251 3.20.20.80
3aquC01 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.8529 27 362 3.20.20.80
af_Q1PE65_1_147_3.20.20.80 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.8525 106 251 3.20.20.80
af_A0A0K3AUR1_84_360_3.20.20.80 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.8491 28 250 3.20.20.80
ID Description Score Start End GO Terms
AF-A0A1M3HRN9-F1-model_v4 chitinase (EC 3.2.1.14) 0.9821 31 362 GO:0004568
GO:0005975
GO:0006032
GO:0008061
AF-A0A7Y0AHL8-F1-model_v4 chitinase (EC 3.2.1.14) 0.9814 26 361 GO:0004568
GO:0005975
GO:0006032
GO:0008061
AF-A0A4V2AYH2-F1-model_v4 chitinase (EC 3.2.1.14) 0.9806 27 254 GO:0004568
GO:0005975
GO:0006032
GO:0008061
AF-A0A5C8DWM2-F1-model_v4 chitinase (EC 3.2.1.14) 0.9777 25 363 GO:0000272
GO:0004568
GO:0006032
GO:0008061
AF-B3PBW8-F1-model_v4 chitinase (EC 3.2.1.14) 0.9775 26 363 GO:0000272
GO:0006032
GO:0008061
GO:0008843

Map