F288537

General Info

Members Datasets Scaffolds Average Seq Length
187 146 374 427

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2919446982|2919450710
Length 475
Sequence DPTTGHGPAGAAGPADGVVDRTAEHGTGRPRAVALDGPHFDDHRPPSQELLSDCVHCGFCLPTCPTYVLWGEEMDSPRGRIHLMQQVVGGEPLTPEVVGHFDACLGCMACVTACPSGVQYDKLITDTRAQVERNTTRTPSDRALREAVFALFPYPRRLRALRGPLRLHQRSGLSRLLRRSGVLQRISPQLAAMESLAPSLGRREDVPALTPARGTRRGTVGMLLGCVQREFFPGVNAATARVLAAEGFDVVAPPGQGCCGALSAHNGREEEAAGFARRLVEEFERAGVEHVVVNSAGCGSAMKEYADLLADDPAWADRARAFADRVRDVSEILAEVGPVAPRHPLEVSVAYHDACHLGHAQGVRAQPRELLRGIPGLELREVNEASLCCGSAGIYNLLKPEAARELGDRKATNVVATGAELLVTANPGCLMQVRTSLERAGAAMAMAHTVEVLDASIRGLSPEDLGVTRGRSTQP

Samples

Sample ID Description Type Environment
1 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
2 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
6 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
7 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
8 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
9 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
10 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
11 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
12 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
13 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
14 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
15 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
16 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
17 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
18 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
19 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
20 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
21 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
22 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
23 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
24 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
25 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
26 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
27 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
28 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
29 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
30 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
31 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
32 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
33 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
34 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
35 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
36 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
37 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
38 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
39 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
40 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
65 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
66 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
67 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
68 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
69 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
70 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
71 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
72 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
73 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
74 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
75 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
76 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
77 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
78 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
79 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
80 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
81 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
82 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
83 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
84 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
85 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
86 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
87 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
88 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
89 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
90 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
91 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
92 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
93 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
94 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
95 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
96 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
97 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
98 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
99 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
100 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
101 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
102 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
103 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
104 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
105 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
106 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
107 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
108 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
109 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
110 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
111 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
112 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
113 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
114 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
115 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
116 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
117 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
118 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
119 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
120 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
121 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
122 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
123 2919446982 Phycicoccus sp. 3266 Isolate Rhizosphere
124 2643221567 Phycicoccus sp. Root563 Isolate Unclassified
125 2643221624 Phycicoccus sp. Root101 Isolate Unclassified
126 2675903060 Nonomuraea wenchangensis CGMCC 4.5598 Isolate Rhizosphere
127 2775506925 Saccharopolyspora phatthalungensis NRRL B-24798 Isolate Rhizosphere
128 2808606439 Nocardioides sp. SLBN-172 Isolate Unclassified
129 2811994878 Nocardioides sp. SLBN-169 Isolate Unclassified
130 2811994882 Terrabacter sp. SLBN-196 Isolate Unclassified
131 2818991462 Terrabacter sp. 3264 Isolate Rhizosphere
132 2818991469 Terrabacter lapilli 3265 Isolate Rhizosphere
133 2856741275 Microbispora triticiradicis NEAU-HRDPA2-9 Isolate Unclassified
134 2863067949 Saccharopolyspora phatthalungensis DSM 45584 (Annotation) (version 2) Isolate Rhizosphere
135 2867302475 Micromonospora globbae WPS1-2 Isolate Unclassified
136 2873314349 Sphaerisporangium siamense DSM 45784 Isolate Rhizosphere
137 2884693830 Nonomuraea phyllanthi WYY166 Isolate Unclassified
138 2891395885 Microbispora catharanthi CR1-09 Isolate Unclassified
139 2891554331 Microbispora sp. CL1-1 Isolate Unclassified
140 2891562705 Microbispora tritici MT50 Isolate Unclassified
141 2891968417 Nocardioides luteus SAI-037 Isolate Unclassified
142 2895427314 Nonomuraea sp. PA05 Isolate Unclassified
143 2895442618 Nonomuraea phyllanthi PA1-10 Isolate Unclassified
144 8055066027 Sphaerisporangium corydalis NEAU-YHS15 Isolate Unclassified
145 8055172936 Sphaerisporangium perillae NEAU-ZS1 Isolate Unclassified
146 8056207758 Saccharopolyspora indica KCTC 29208 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 85.56
Metatranscriptomes 1.6
Isolates 12.83

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.53
Nodule 0
Rhizoplane 4.81
Rhizosphere 81.28
Stem 0
Stem Tuber 0
Unclassified 4.28

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10014402 3300003203 Bacteria 3365
2 Ga0070676_10056546 3300005328 Bacteria 2319
3 Ga0070683_100001491 3300005329 Bacteria 18066
4 Ga0070680_100004653 3300005336 Bacteria 10319
5 Ga0070659_100000721 3300005366 Bacteria 23979
6 Ga0070709_10019004 3300005434 Bacteria 3965
7 Ga0070714_100005922 3300005435 Bacteria 9383
8 Ga0070714_100018986 3300005435 Bacteria 5595
9 Ga0070713_100061567 3300005436 Unclassified 3140
10 Ga0070713_100074292 3300005436 Bacteria 2880
11 Ga0070700_100088511 3300005441 Bacteria 2015
12 Ga0070708_100002616 3300005445 Bacteria 13937
13 Ga0070681_10002484 3300005458 Bacteria 16880
14 Ga0070681_10251497 3300005458 Bacteria 1680
15 Ga0070706_100151909 3300005467 Bacteria 2161
16 Ga0070707_100119571 3300005468 Bacteria 2558
17 Ga0070698_100010011 3300005471 Bacteria 10131
18 Ga0070698_100100895 3300005471 Bacteria 2858
19 Ga0070699_100136143 3300005518 Bacteria 2167
20 Ga0070684_100000537 3300005535 Bacteria 26052
21 Ga0070665_100002147 3300005548 Bacteria 22017
22 Ga0070665_100008479 3300005548 Bacteria 10400
23 Ga0070665_100310654 3300005548 Bacteria 1580
24 Ga0070664_100018916 3300005564 Bacteria 5663
25 Ga0068857_100001920 3300005577 Bacteria 16756
26 Ga0068856_100001844 3300005614 Bacteria 22160
27 Ga0068860_100209449 3300005843 Bacteria 1891
28 Ga0081539_10003467 3300005985 Bacteria 19305
29 Ga0075365_10035698 3300006038 Bacteria 3218
30 Ga0097621_100051950 3300006237 Bacteria 3337
31 Ga0068871_100018351 3300006358 Bacteria 5315
32 Ga0105245_10003644 3300009098 Bacteria 13749
33 Ga0105245_10009915 3300009098 Bacteria 8297
34 Ga0105243_10140220 3300009148 Bacteria 2062
35 Ga0105248_10211530 3300009177 Bacteria 2185
36 Ga0105249_10221407 3300009553 Bacteria 1862
37 Ga0157369_10003420 3300013105 Bacteria 18833
38 Ga0157378_10022841 3300013297 Bacteria 5505
39 Ga0157378_10185924 3300013297 Bacteria 1957
40 Ga0157375_10065750 3300013308 Unclassified 3616
41 Ga0163163_10123151 3300014325 Bacteria 2628
42 Ga0163163_10213600 3300014325 Unclassified 1978
43 Ga0206353_10740028 3300020082 Bacteria 7775
44 Ga0206353_11339583 3300020082 Bacteria 4652
45 Ga0213873_10000193 3300021358 Bacteria 11095
46 Ga0213872_10001204 3300021361 Bacteria 17544
47 Ga0213876_10011162 3300021384 Bacteria 4803
48 Ga0213875_10067452 3300021388 Unclassified 1671
49 Ga0224712_10035739 3300022467 Bacteria 1836
50 Ga0207660_10005327 3300025917 Bacteria 8358
51 Ga0207652_10013325 3300025921 Bacteria 6658
52 Ga0207652_10097054 3300025921 Bacteria 2597
53 Ga0207646_10142606 3300025922 Bacteria 2158
54 Ga0207687_10010828 3300025927 Bacteria 5961
55 Ga0207687_10093673 3300025927 Bacteria 2197
56 Ga0207700_10000961 3300025928 Bacteria 16619
57 Ga0207664_10015981 3300025929 Bacteria 5466
58 Ga0207644_10055309 3300025931 Bacteria 2860
59 Ga0207690_10000259 3300025932 Bacteria 38091
60 Ga0207686_10019781 3300025934 Bacteria 3836
61 Ga0207709_10184891 3300025935 Unclassified 1475
62 Ga0207670_10006510 3300025936 Bacteria 6483
63 Ga0207665_10019217 3300025939 Bacteria 4490
64 Ga0207691_10077590 3300025940 Unclassified 2992
65 Ga0207661_10002976 3300025944 Bacteria 11713
66 Ga0207679_10041217 3300025945 Bacteria 3309
67 Ga0207677_10095156 3300026023 Bacteria 2176
68 Ga0207708_10129947 3300026075 Bacteria 1969
69 Ga0207702_10003928 3300026078 Bacteria 13366
70 Ga0207641_10046525 3300026088 Bacteria 3658
71 Ga0207648_10041379 3300026089 Bacteria 4046
72 Ga0207674_10001239 3300026116 Bacteria 33317
73 Ga0207674_10025771 3300026116 Bacteria 6263
74 Ga0207683_10068906 3300026121 Bacteria 3124
75 Ga0207683_10190252 3300026121 Bacteria 1863
76 Ga0268266_10004427 3300028379 Bacteria 13451
77 Ga0268266_10027594 3300028379 Bacteria 4827
78 Ga0268264_10069011 3300028381 Bacteria 2989
79 Ga0307515_10000883 3300028794 Bacteria 68971
80 Ga0265325_10047622 3300031241 Bacteria 2218
81 Ga0265340_10001507 3300031247 Bacteria 13359
82 Ga0265339_10040003 3300031249 Bacteria 2607
83 Ga0265316_10091465 3300031344 Bacteria 2321
84 Ga0265342_10048768 3300031712 Bacteria 2537
85 Ga0307410_10219430 3300031852 Bacteria 1462
86 Ga0307407_10031241 3300031903 Bacteria 2882
87 Ga0307412_10102347 3300031911 Bacteria 2028
88 Ga0307409_100004851 3300031995 Bacteria 7638
89 Ga0307416_100000338 3300032002 Bacteria 24246
90 Ga0307415_100000230 3300032126 Bacteria 24541
91 Ga0373937_0095447 3300036401 Bacteria 2757
92 Ga0436364_0060675 3300037853 Bacteria 4110
93 Ga0436364_0590382 3300037853 Bacteria 30498
94 Ga0436364_0772833 3300037853 Unclassified 1732
95 Ga0436364_1035594 3300037853 Bacteria 6354
96 Ga0395901_0180302 3300038443 Bacteria 2215
97 Ga0436365_0110998 3300039437 Bacteria 61296
98 Ga0436365_1693240 3300039437 Bacteria 28201
99 Ga0436360_0165869 3300039438 Bacteria 3182
100 Ga0436360_0660330 3300039438 Bacteria 2673
101 Ga0436360_0726778 3300039438 Bacteria 2128
102 Ga0436360_1131231 3300039438 Bacteria 2214
103 Ga0436361_0379223 3300039447 Bacteria 1952
104 Ga0436361_0432109 3300039447 Bacteria 9704
105 Ga0436361_0581943 3300039447 Bacteria 3333
106 Ga0436361_0600662 3300039447 Bacteria 4626
107 Ga0436361_1143677 3300039447 Bacteria 3510
108 Ga0436362_0284585 3300039453 Bacteria 37258
109 Ga0436362_0340532 3300039453 Bacteria 3142
110 Ga0436362_0981625 3300039453 Unclassified 2051
111 Ga0466965_0105768 3300044683 Bacteria 1443
112 Ga0466966_0003664 3300044684 Bacteria 10138
113 Ga0466963_0000531 3300044694 Bacteria 17890
114 Ga0466964_0055981 3300044706 Bacteria 1630
115 Ga0466971_0011355 3300044719 Bacteria 3901
116 Ga0466957_0005033 3300044842 Bacteria 7400
117 Ga0466960_0020712 3300044901 Bacteria 2917
118 Ga0466960_0024375 3300044901 Bacteria 2728
119 Ga0466960_0072607 3300044901 Bacteria 1716
120 Ga0466959_0006978 3300045049 Bacteria 7893
121 Ga0466958_0000528 3300045836 Bacteria 16172
122 Ga0466967_0038936 3300045976 Bacteria 4082
123 Ga0466967_0066672 3300045976 Bacteria 3208
124 Ga0466967_0321995 3300045976 Bacteria 1491
125 Ga0495653_0076703 3300046463 Bacteria 2484
126 Ga0495640_0131408 3300046533 Bacteria 1620
127 Ga0495659_0006245 3300046664 Bacteria 3765
128 Ga0495659_0009608 3300046664 Bacteria 3091
129 Ga0495674_0075496 3300047319 Bacteria 2901
130 Ga0496104_0103099 3300048907 Bacteria 2733
131 Ga0496104_0208403 3300048907 Bacteria 1867
132 Ga0496105_0101273 3300048908 Bacteria 2379
133 Ga0496108_0135173 3300048911 Bacteria 2121
134 Ga0496108_0200328 3300048911 Bacteria 1732
135 Ga0496109_0195942 3300048912 Bacteria 1899
136 Ga0496111_0037942 3300048914 Bacteria 3450
137 Ga0496113_0090423 3300048916 Bacteria 2358
138 Ga0496114_0010931 3300048917 Bacteria 7236
139 Ga0501034_0137404 3300049571 Bacteria 2425
140 Ga0501034_0313496 3300049571 Bacteria 1503
141 Ga0501040_0002194 3300049576 Bacteria 12583
142 Ga0501046_0039812 3300049580 Bacteria 3760
143 Ga0501048_0023325 3300049582 Bacteria 4523
144 Ga0501070_0002449 3300049586 Bacteria 16256
145 Ga0501070_0011398 3300049586 Bacteria 7514
146 Ga0501070_0030909 3300049586 Bacteria 4486
147 Ga0501071_0038351 3300049587 Bacteria 3424
148 Ga0501072_0027051 3300049588 Bacteria 4476
149 Ga0501074_0006616 3300049590 Bacteria 8379
150 Ga0501075_0055717 3300049591 Bacteria 2975
151 Ga0501076_0012375 3300049592 Bacteria 6378
152 Ga0501079_0003333 3300049741 Bacteria 11785
153 Ga0501080_0000566 3300049742 Bacteria 29247
154 Ga0501080_0018881 3300049742 Bacteria 6385
155 Ga0501044_0014817 3300049823 Bacteria 8405
156 Ga0495612_0036277 3300053078 Bacteria 2001
157 Ga0495619_0032270 3300053085 Bacteria 3398
158 Ga0495619_0066457 3300053085 Bacteria 2406
159 Ga0501084_0020243 3300054114 Bacteria 5547
160 Ga0501082_0020504 3300060353 Bacteria 5699
161 Ga0466962_0014228 3300061719 Bacteria 3833
162 Ga0466962_0058521 3300061719 Bacteria 1839
163 Ga0530510_0008969 3300061734 Bacteria 7008
164 2919450710 2919446982 Bacteria 3994487
165 2643850584 2643221567 Bacteria 4163945
166 2644134340 2643221624 Bacteria 4384879
167 2676491767 2675903060 Bacteria 10051191
168 2776373202 2775506925 Bacteria 7237746
169 2809196755 2808606439 Bacteria 5952208
170 2812351117 2811994878 Bacteria 5992952
171 2812375808 2811994882 Bacteria 4688362
172 2819690400 2818991462 Bacteria 4320267
173 2819728339 2818991469 Bacteria 4644110
174 2856743741 2856741275 Bacteria 8096094
175 2863070795 2863067949 Bacteria 8541735
176 2867305589 2867302475 Bacteria 7087181
177 2873321356 2873314349 Bacteria 8512634
178 2884696112 2884693830 Bacteria 11273186
179 2891396104 2891395885 Bacteria 9251614
180 2891558732 2891554331 Bacteria 8812224
181 2891567260 2891562705 Bacteria 8039471
182 2891971339 2891968417 Bacteria 5821697
183 2895432309 2895427314 Bacteria 13147766
184 2895449479 2895442618 Bacteria 11027144
185 8055071992 8055066027 Bacteria 9479577
186 8055173364 8055172936 Bacteria 9305943
187 8056211716 8056207758 Bacteria 8639239
188 JGI25406J46586_10014402
189 Ga0070676_10056546
190 Ga0070683_100001491
191 Ga0070680_100004653
192 Ga0070659_100000721
193 Ga0070709_10019004
194 Ga0070714_100005922
195 Ga0070714_100018986
196 Ga0070713_100061567
197 Ga0070713_100074292
198 Ga0070700_100088511
199 Ga0070708_100002616
200 Ga0070681_10002484
201 Ga0070681_10251497
202 Ga0070706_100151909
203 Ga0070707_100119571
204 Ga0070698_100010011
205 Ga0070698_100100895
206 Ga0070699_100136143
207 Ga0070684_100000537
208 Ga0070665_100002147
209 Ga0070665_100008479
210 Ga0070665_100310654
211 Ga0070664_100018916
212 Ga0068857_100001920
213 Ga0068856_100001844
214 Ga0068860_100209449
215 Ga0081539_10003467
216 Ga0075365_10035698
217 Ga0097621_100051950
218 Ga0068871_100018351
219 Ga0105245_10003644
220 Ga0105245_10009915
221 Ga0105243_10140220
222 Ga0105248_10211530
223 Ga0105249_10221407
224 Ga0157369_10003420
225 Ga0157378_10022841
226 Ga0157378_10185924
227 Ga0157375_10065750
228 Ga0163163_10123151
229 Ga0163163_10213600
230 Ga0206353_10740028
231 Ga0206353_11339583
232 Ga0213873_10000193
233 Ga0213872_10001204
234 Ga0213876_10011162
235 Ga0213875_10067452
236 Ga0224712_10035739
237 Ga0207660_10005327
238 Ga0207652_10013325
239 Ga0207652_10097054
240 Ga0207646_10142606
241 Ga0207687_10010828
242 Ga0207687_10093673
243 Ga0207700_10000961
244 Ga0207664_10015981
245 Ga0207644_10055309
246 Ga0207690_10000259
247 Ga0207686_10019781
248 Ga0207709_10184891
249 Ga0207670_10006510
250 Ga0207665_10019217
251 Ga0207691_10077590
252 Ga0207661_10002976
253 Ga0207679_10041217
254 Ga0207677_10095156
255 Ga0207708_10129947
256 Ga0207702_10003928
257 Ga0207641_10046525
258 Ga0207648_10041379
259 Ga0207674_10001239
260 Ga0207674_10025771
261 Ga0207683_10068906
262 Ga0207683_10190252
263 Ga0268266_10004427
264 Ga0268266_10027594
265 Ga0268264_10069011
266 Ga0307515_10000883
267 Ga0265325_10047622
268 Ga0265340_10001507
269 Ga0265339_10040003
270 Ga0265316_10091465
271 Ga0265342_10048768
272 Ga0307410_10219430
273 Ga0307407_10031241
274 Ga0307412_10102347
275 Ga0307409_100004851
276 Ga0307416_100000338
277 Ga0307415_100000230
278 Ga0373937_0095447
279 Ga0436364_0060675
280 Ga0436364_0590382
281 Ga0436364_0772833
282 Ga0436364_1035594
283 Ga0395901_0180302
284 Ga0436365_0110998
285 Ga0436365_1693240
286 Ga0436360_0165869
287 Ga0436360_0660330
288 Ga0436360_0726778
289 Ga0436360_1131231
290 Ga0436361_0379223
291 Ga0436361_0432109
292 Ga0436361_0581943
293 Ga0436361_0600662
294 Ga0436361_1143677
295 Ga0436362_0284585
296 Ga0436362_0340532
297 Ga0436362_0981625
298 Ga0466965_0105768
299 Ga0466966_0003664
300 Ga0466963_0000531
301 Ga0466964_0055981
302 Ga0466971_0011355
303 Ga0466957_0005033
304 Ga0466960_0020712
305 Ga0466960_0024375
306 Ga0466960_0072607
307 Ga0466959_0006978
308 Ga0466958_0000528
309 Ga0466967_0038936
310 Ga0466967_0066672
311 Ga0466967_0321995
312 Ga0495653_0076703
313 Ga0495640_0131408
314 Ga0495659_0006245
315 Ga0495659_0009608
316 Ga0495674_0075496
317 Ga0496104_0103099
318 Ga0496104_0208403
319 Ga0496105_0101273
320 Ga0496108_0135173
321 Ga0496108_0200328
322 Ga0496109_0195942
323 Ga0496111_0037942
324 Ga0496113_0090423
325 Ga0496114_0010931
326 Ga0501034_0137404
327 Ga0501034_0313496
328 Ga0501040_0002194
329 Ga0501046_0039812
330 Ga0501048_0023325
331 Ga0501070_0002449
332 Ga0501070_0011398
333 Ga0501070_0030909
334 Ga0501071_0038351
335 Ga0501072_0027051
336 Ga0501074_0006616
337 Ga0501075_0055717
338 Ga0501076_0012375
339 Ga0501079_0003333
340 Ga0501080_0000566
341 Ga0501080_0018881
342 Ga0501044_0014817
343 Ga0495612_0036277
344 Ga0495619_0032270
345 Ga0495619_0066457
346 Ga0501084_0020243
347 Ga0501082_0020504
348 Ga0466962_0014228
349 Ga0466962_0058521
350 Ga0530510_0008969
351 2919450710
352 2643850584
353 2644134340
354 2676491767
355 2776373202
356 2809196755
357 2812351117
358 2812375808
359 2819690400
360 2819728339
361 2856743741
362 2863070795
363 2867305589
364 2873321356
365 2884696112
366 2891396104
367 2891558732
368 2891567260
369 2891971339
370 2895432309
371 2895449479
372 8055071992
373 8055173364
374 8056211716

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02754

CCG

Cysteine-rich domain

349

434

0.97

PF02754

CCG

Cysteine-rich domain

220

303

0.96

PF12800

Fer4_4

4Fe-4S binding domain

51

67

0.91

PF12800

Fer4_4

4Fe-4S binding domain

101

120

0.91

PF00037

Fer4

4Fe-4S binding domain

97

120

0.88

PF12838

Fer4_7

4Fe-4S dicluster domain

53

118

0.86

PF13534

Fer4_17

4Fe-4S dicluster domain

53

119

0.83

PF13183

Fer4_8

4Fe-4S dicluster domain

50

118

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
7bkb-assembly1.cif.gz_B formate dehydrogenase - heterodisulfide reductase - formylmethanofuran dehydrogenase complex from methanospirillum hungatei (hexameric, composite structure) 0.8229 190 430
5odq-assembly1.cif.gz_B heterodisulfide reductase / [nife]-hydrogenase complex from methanothermococcus thermolithotrophicus soaked with bromoethanesulfonate. 0.7824 192 430
5odr-assembly1.cif.gz_I heterodisulfide reductase / [nife]-hydrogenase complex from methanothermococcus thermolithotrophicus soaked with heterodisulfide for 2 minutes. 0.7443 26 126
5odc-assembly1.cif.gz_I heterodisulfide reductase / [nife]-hydrogenase complex from methanothermococcus thermolithotrophicus at 2.3 a resolution 0.702 26 129
7bkb-assembly1.cif.gz_B formate dehydrogenase - heterodisulfide reductase - formylmethanofuran dehydrogenase complex from methanospirillum hungatei (hexameric, composite structure) 0.6794 190 430
ID Description Score Start End Superfamily
af_P77252_132_217_3.40.30.10 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.918 323 406 3.40.30.10
af_P77252_3_85_3.40.30.10 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.8936 194 272 3.40.30.10
af_P77252_132_217_3.40.30.10 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.8884 323 406 3.40.30.10
af_P77252_3_85_3.40.30.10 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.8454 194 272 3.40.30.10
af_P52074_1_109_1.10.1060.10 Mainly Alpha;Orthogonal Bundle;Fumarate Reductase Iron-sulfur Protein; Chain B, domain 2;Alpha-helical ferredoxin 0.8104 13 115 1.10.1060.10
ID Description Score Start End GO Terms
AF-A0A317HTK9-F1-model_v4 Glycolate oxidase 0.965 32 435 GO:0016491
GO:0046872
GO:0051539
AF-A0A1Q9V2Q2-F1-model_v4 Glycolate oxidase iron-sulfur subunit (EC 1.1.99.14) 0.9635 13 434 GO:0016491
GO:0046872
GO:0051539
AF-A0A2V4B9I2-F1-model_v4 Glycolate oxidase iron-sulfur subunit (EC 1.1.99.14) 0.9635 13 435 GO:0016491
GO:0046872
GO:0051539
AF-A0A2W6BN88-F1-model_v4 Glycolate oxidase iron-sulfur subunit 0.9608 30 436 GO:0016491
GO:0046872
GO:0051539
AF-A0A534Y5F9-F1-model_v4 Glycolate oxidase iron-sulfur subunit (EC 1.1.99.14) 0.9601 68 434 GO:0016491
GO:0046872
GO:0051539

Map