F288514

General Info

Members Datasets Scaffolds Average Seq Length
187 139 374 347

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2751185734|2753072999
Length 413
Sequence ASIERLTPAPHFDSAEALSGAMTRPVRPSRVEIAPGRGPGRTSEEWQADTVFVAWRDLRFAKGRFALMGTVVVLMTLLVGLLSGLTAGLARDSTSAITGLPADRLAFAAPVEGRSPSFTDSVVDAAQWREWARVPGVTAAEPLGVTTTRATSGEGDTAAVSAFGVRSGSPLAPESGKLATGQVVLSIGAAEDLRVEPGDTLTLADVRLTVAAVSGDAAYSHTPVVWTSLDDWQRLVPGGGAGDVEHATVIALSTSDDEGVDVAAADAGLRTKTVDLADALPAIGSFTSENGSLELMRGFLFAISALVIGAFFTVWTVQRSGDIAVLKALGATTAYLMRDALGQALVLLTGGTAIGAGLAAAVGAAAADAVPFVLDTSTVLVPALVTIALGAAGAALAVRRITAVDPLSALSTR

Samples

Sample ID Description Type Environment
1 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
2 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
3 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
4 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
5 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
6 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
7 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
8 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
9 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
10 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
11 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
12 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
13 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
14 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
15 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
16 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
17 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
18 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
19 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
20 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
21 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
22 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
23 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
24 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
25 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
26 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
27 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
28 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
29 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
30 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
31 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
32 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
33 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
34 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
35 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
36 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
37 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
38 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
39 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
40 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
41 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
42 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
43 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
44 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
45 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
46 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
47 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
48 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
49 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
50 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
51 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
52 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
53 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
54 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
55 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
56 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
57 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
58 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
59 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
60 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
61 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
62 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
63 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
64 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
65 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
66 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
67 2751185734 Saccharothrix sp. NRRL B-16314 Isolate Rhizosphere
68 2551306166 Nocardia tenerifensis NBRC 101015 Isolate Rhizosphere
69 2554235005 Streptomyces violaceusniger SPC6 Isolate Rhizosphere
70 2565956761 Rhodococcus qingshengii BKS 20-40 Isolate Rhizosphere
71 2582581312 Streptomyces atratus OK008 Isolate Rhizosphere
72 2585427649 Amycolatopsis japonica MG417-CF17, DSM 44213 Isolate Unclassified
73 2616644941 Streptomyces atratus OK807 Isolate Rhizosphere
74 2643221548 Streptomyces sp. Root55 Isolate Unclassified
75 2643221561 Nocardioides sp. Root151 Isolate Unclassified
76 2643221578 Streptomyces sp. Root63 Isolate Unclassified
77 2643221587 Streptomyces sp. Root66D1 Isolate Unclassified
78 2643221601 Kitasatospora sp. Root187 Isolate Unclassified
79 2643221613 Oerskovia sp. Root22 Isolate Unclassified
80 2643221631 Kitasatospora sp. Root107 Isolate Unclassified
81 2643221670 Streptomyces sp. Root431 Isolate Unclassified
82 2643221673 Streptomyces sp. Root1295 Isolate Unclassified
83 2643221677 Streptomyces sp. Root1304 Isolate Unclassified
84 2643221682 Streptomyces sp. Root1319 Isolate Unclassified
85 2643221692 Nocardia sp. Root136 Isolate Unclassified
86 2643221696 Nocardioides sp. Root140 Isolate Unclassified
87 2643221721 Oerskovia sp. Root918 Isolate Unclassified
88 2738541308 Rhodococcus sp. OK551 Isolate Unclassified
89 2738543005 Rhodococcus sp. OK519 Isolate Unclassified
90 2738543011 Rhodococcus sp. OK611 Isolate Unclassified
91 2784132109 Dermacoccus sp. DS28 SAI-028 Isolate Unclassified
92 2802429296 Streptomyces sampsonii KJ40 Isolate Rhizosphere
93 2808606372 Agromyces sp. 23-23 Isolate Unclassified
94 2808606448 Streptomyces sp. 193411 Isolate Unclassified
95 2808606522 Amycolatopsis sp. BJA-103 Isolate Unclassified
96 2808606982 Streptomyces sp. SLBN-118 Isolate Unclassified
97 2811994917 Streptomyces sp. SLBN-134 Isolate Unclassified
98 2818991463 Streptomyces argenteolus 3259 Isolate Rhizosphere
99 2818991472 Kitasatospora viridis DSM 44826 Isolate Rhizosphere
100 2855683550 Micromonospora sp. RP3T Isolate Unclassified
101 2858902515 Micromonospora sp. MW-13 Isolate Rhizosphere
102 2861520306 Phytomonospora endophytica DSM 45386 Isolate Unclassified
103 2862178590 Streptomyces sp. SDr-06 Isolate Rhizosphere
104 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
105 2862290372 Streptomyces triticagri NEAU-YY421 Isolate Rhizosphere
106 2862507626 Streptomyces sp. NWU339 Isolate Unclassified
107 2873151551 Streptomyces silaceus ACCC40021 Isolate Rhizosphere
108 2873314349 Sphaerisporangium siamense DSM 45784 Isolate Rhizosphere
109 2875391855 Streptomyces cavourensis 1AS2a Isolate Rhizosphere
110 2884763398 Leifsonia sp. PS1209 Isolate Stem Tuber
111 2887443736 Ruania rhizosphaerae LNNU 22110 Isolate Rhizosphere
112 2889300758 Rhodococcus sp. PvR099 Isolate Rhizosphere
113 2895660088 Leifsonia flava SYP-B2174 Isolate Rhizosphere
114 2904535858 Rhodococcus erythropolis 2017 Isolate Unclassified
115 2912723979 Streptomyces sp. NEAU-sy36 Isolate Rhizosphere
116 2915768154 Amycolatopsis pittospori PIP199 Isolate Unclassified
117 2917736166 Amycolatopsis dendrobii DR6-1 Isolate Unclassified
118 2918501144 Streptomyces sp. PvR006 Isolate Rhizosphere
119 2919051321 Sinomonas atrocyanea 1003 Isolate Rhizosphere
120 2922554459 Rhodococcus sp. 66b Isolate Unclassified
121 2928142448 Prescottella equi DPS 2018 Isolate Unclassified
122 2935390628 Streptomyces sp. PvR034 Isolate Rhizosphere
123 2935890801 Oerskovia enterophila 3230 Isolate Rhizosphere
124 2939743619 Rhodococcus sp. PvR044 Isolate Rhizosphere
125 2946045630 Streptomyces sp. W4I9-2 Isolate Rhizosphere
126 2966598605 Kitasatospora papulosa SLBN-177 Isolate Rhizosphere
127 2990044586 Streptomyces sedi JCM 16909 Isolate Unclassified
128 2997451912 Streptomyces piniterrae jys28 Isolate Rhizosphere
129 2997600082 Streptomyces coffeae CA1R205 Isolate Unclassified
130 3006486233 Streptomyces sp. BR123 Isolate Rhizosphere
131 8001781756 Catellatospora tritici NEAU-YM18 Isolate Rhizosphere
132 8003856774 Micromonospora echinofusca MPMI6 Isolate Unclassified
133 8008574985 Streptomyces sp. Jing01 Isolate Rhizosphere
134 8023623736 Streptomyces sp. 111WW2 Isolate Unclassified
135 8025413630 Streptomyces sp. CAI-17 Isolate Rhizosphere
136 8025478263 Streptomyces telluris AA8 Isolate Rhizosphere
137 8048406513 Streptomyces heilongjiangensis NEAU-W2 Isolate Unclassified
138 8056060235 Nocardiopsis endophytica RSe5-2 Isolate Unclassified
139 8057345674 Herbiconiux aconitum CPCC 205763 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 52.94
Metatranscriptomes 1.07
Isolates 45.99

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.88
Nodule 0
Rhizoplane 0
Rhizosphere 65.24
Stem 0
Stem Tuber 0.53
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25164J39214_1000385 3300002772 Bacteria 26010
2 JGI25165J46597_1000014 3300003214 Bacteria 390383
3 JGI25160J50197_1011208 3300003354 Bacteria 3192
4 JGI25160J50197_1016659 3300003354 Bacteria 2359
5 Ga0006562J51391_1058481 3300003578 Bacteria 11540
6 Ga0006562J51391_1058485 3300003578 Bacteria 7020
7 Ga0065714_10096675 3300005288 Bacteria 1755
8 Ga0105243_10001032 3300009148 Bacteria 25576
9 Ga0157375_10085643 3300013308 Bacteria 3201
10 Ga0207427_100041 3300025231 Bacteria 263659
11 Ga0209437_100267 3300025233 Bacteria 79455
12 Ga0209233_1000014 3300025261 Bacteria 996641
13 Ga0207426_1001265 3300025302 Bacteria 22064
14 Ga0207426_1007943 3300025302 Bacteria 4369
15 Ga0207709_10000888 3300025935 Bacteria 22597
16 Ga0307515_10060432 3300028794 Bacteria 5404
17 Ga0307413_10000606 3300031824 Bacteria 12029
18 Ga0307518_10012935 3300031838 Bacteria 5961
19 Ga0395900_0104807 3300037418 Bacteria 2905
20 Ga0395901_0087347 3300038443 Bacteria 3260
21 Ga0495603_0003120 3300046455 Bacteria 9849
22 Ga0495603_0003639 3300046455 Bacteria 9171
23 Ga0495603_0004675 3300046455 Bacteria 8181
24 Ga0495629_0001163 3300046459 Bacteria 20753
25 Ga0495629_0009748 3300046459 Bacteria 7008
26 Ga0495629_0062145 3300046459 Bacteria 2609
27 Ga0495651_0001046 3300046462 Bacteria 21425
28 Ga0495639_0015360 3300046475 Bacteria 3321
29 Ga0495662_0028629 3300046476 Bacteria 2689
30 Ga0495594_0093242 3300046499 Bacteria 1689
31 Ga0495628_0072410 3300046516 Bacteria 2685
32 Ga0495652_0005061 3300046529 Bacteria 12482
33 Ga0495652_0069376 3300046529 Bacteria 2951
34 Ga0495640_0126169 3300046533 Bacteria 1660
35 Ga0495657_0070774 3300046675 Bacteria 2279
36 Ga0495613_0001724 3300046689 Bacteria 16647
37 Ga0495613_0002506 3300046689 Bacteria 13848
38 Ga0495604_0031088 3300047317 Bacteria 4237
39 Ga0495676_0067679 3300047321 Bacteria 2762
40 Ga0495680_0022343 3300047322 Bacteria 5273
41 Ga0495614_0000355 3300048089 Bacteria 18298
42 Ga0495614_0005847 3300048089 Bacteria 5542
43 Ga0496119_0000786 3300048922 Bacteria 42394
44 Ga0496120_0000336 3300048923 Bacteria 78318
45 Ga0501032_0010377 3300049569 Bacteria 6717
46 Ga0501032_0052113 3300049569 Bacteria 2757
47 Ga0501033_0020638 3300049570 Bacteria 4977
48 Ga0501033_0049399 3300049570 Bacteria 3122
49 Ga0501034_0034411 3300049571 Bacteria 5135
50 Ga0501034_0070106 3300049571 Bacteria 3517
51 Ga0501034_0199765 3300049571 Bacteria 1958
52 Ga0501034_0396873 3300049571 Bacteria 1302
53 Ga0501034_0460497 3300049571 Bacteria 1188
54 Ga0501036_0164483 3300049572 Bacteria 1870
55 Ga0501036_0317251 3300049572 Bacteria 1302
56 Ga0501037_0014869 3300049573 Bacteria 5726
57 Ga0501037_0059700 3300049573 Bacteria 2781
58 Ga0501037_0154889 3300049573 Bacteria 1636
59 Ga0501038_0243804 3300049574 Bacteria 1426
60 Ga0501039_0118052 3300049575 Bacteria 2077
61 Ga0501040_0009286 3300049576 Bacteria 6405
62 Ga0501041_0002524 3300049577 Bacteria 10431
63 Ga0501042_0113770 3300049578 Bacteria 1948
64 Ga0501043_0003523 3300049579 Bacteria 12872
65 Ga0501043_0068734 3300049579 Bacteria 2781
66 Ga0501046_0085278 3300049580 Bacteria 2435
67 Ga0501047_0001896 3300049581 Bacteria 20095
68 Ga0501047_0014181 3300049581 Bacteria 7574
69 Ga0501047_0086624 3300049581 Bacteria 3009
70 Ga0501067_0000635 3300049583 Bacteria 18888
71 Ga0501067_0006358 3300049583 Bacteria 6547
72 Ga0501068_0003797 3300049584 Bacteria 8188
73 Ga0501068_0140763 3300049584 Bacteria 1512
74 Ga0501069_0019418 3300049585 Bacteria 3675
75 Ga0501070_0007120 3300049586 Bacteria 9498
76 Ga0501070_0023446 3300049586 Bacteria 5170
77 Ga0501070_0055627 3300049586 Bacteria 3279
78 Ga0501071_0053448 3300049587 Bacteria 2913
79 Ga0501072_0002076 3300049588 Bacteria 14900
80 Ga0501072_0016021 3300049588 Bacteria 5748
81 Ga0501073_0003593 3300049589 Bacteria 11658
82 Ga0501073_0005531 3300049589 Bacteria 9460
83 Ga0501073_0055843 3300049589 Bacteria 2762
84 Ga0501074_0030427 3300049590 Bacteria 3912
85 Ga0501074_0100281 3300049590 Bacteria 2073
86 Ga0501074_0185953 3300049590 Bacteria 1481
87 Ga0501076_0251767 3300049592 Bacteria 1445
88 Ga0501077_0123444 3300049593 Bacteria 1641
89 Ga0501079_0002415 3300049741 Bacteria 13552
90 Ga0501079_0197761 3300049741 Bacteria 1569
91 Ga0501083_0004294 3300049744 Bacteria 10037
92 Ga0501035_0001036 3300049822 Bacteria 29178
93 Ga0501035_0056693 3300049822 Bacteria 3494
94 Ga0501044_0002582 3300049823 Bacteria 20610
95 Ga0501044_0015404 3300049823 Bacteria 8234
96 Ga0501044_0026379 3300049823 Bacteria 6150
97 Ga0501045_0015691 3300049824 Bacteria 5373
98 nmdc:mga03n38_19595_c1 3300050490 Bacteria 2691
99 nmdc:mga07m45_27844_c1 3300050496 Bacteria 3117
100 Ga0501084_0015697 3300054114 Bacteria 6281
101 Ga0530510_0221901 3300061734 Bacteria 1405
102 2753072999 2751185734 Bacteria 8863695
103 2552110805 2551306166 Bacteria 9731570
104 2554260636 2554235005 Bacteria 6457341
105 2566997229 2565956761 Bacteria 6601618
106 2585297186 2582581312 Bacteria 7308206
107 2585298826 2582581312 Bacteria 7308206
108 2586061064 2585427649 Bacteria 9053857
109 2616902600 2616644941 Bacteria 8510691
110 2616902720 2616644941 Bacteria 8510691
111 2643760591 2643221548 Bacteria 8053412
112 2643761965 2643221548 Bacteria 8053412
113 2643826101 2643221561 Bacteria 4984412
114 2643901189 2643221578 Bacteria 9213798
115 2643903879 2643221578 Bacteria 9213798
116 2643942839 2643221587 Bacteria 7586415
117 2644019278 2643221601 Bacteria 7493239
118 2644081796 2643221613 Bacteria 4622396
119 2644084595 2643221613 Bacteria 4622396
120 2644174186 2643221631 Bacteria 8168043
121 2644388089 2643221670 Bacteria 6497041
122 2644402231 2643221673 Bacteria 9196637
123 2644407333 2643221673 Bacteria 9196637
124 2644430298 2643221677 Bacteria 7584031
125 2644460608 2643221682 Bacteria 6743283
126 2644514012 2643221692 Bacteria 7282860
127 2644532092 2643221696 Bacteria 5431823
128 2644665162 2643221721 Bacteria 4486924
129 2644667207 2643221721 Bacteria 4486924
130 2738891793 2738541308 Bacteria 7020677
131 2738891968 2738541308 Bacteria 7020677
132 2739204174 2738543005 Bacteria 5278128
133 2739205771 2738543005 Bacteria 5278128
134 2739238160 2738543011 Bacteria 5731169
135 2784473358 2784132109 Bacteria 3141763
136 2804846836 2802429296 Bacteria 7227771
137 2808903274 2808606372 Bacteria 4649509
138 2809230137 2808606448 Bacteria 8656184
139 2809589897 2808606522 Bacteria 9488490
140 2811843621 2808606982 Bacteria 7791042
141 2812478473 2811994917 Bacteria 7761064
142 2819698388 2818991463 Bacteria 7948711
143 2819743768 2818991472 Bacteria 10089953
144 2855684329 2855683550 Bacteria 7134265
145 2858904364 2858902515 Bacteria 7086037
146 2861521734 2861520306 Bacteria 8348283
147 2862183908 2862178590 Bacteria 8583590
148 2862290321 2862281513 Bacteria 9621493
149 2862294985 2862290372 Bacteria 7471434
150 2862514286 2862507626 Bacteria 9425308
151 2873153183 2873151551 Bacteria 8625867
152 2873316884 2873314349 Bacteria 8512634
153 2875397553 2875391855 Bacteria 7600475
154 2884763798 2884763398 Bacteria 4091164
155 2887447771 2887443736 Bacteria 4426037
156 2889303282 2889300758 Bacteria 5690814
157 2895663152 2895660088 Bacteria 3782833
158 2904536297 2904535858 Bacteria 6308016
159 2912728864 2912723979 Bacteria 8557534
160 2915771747 2915768154 Bacteria 8424322
161 2917740839 2917736166 Bacteria 9690793
162 2918507384 2918501144 Bacteria 8668083
163 2919051940 2919051321 Bacteria 4210889
164 2922558226 2922554459 Bacteria 6683962
165 2928144139 2928142448 Bacteria 5288925
166 2928145061 2928142448 Bacteria 5288925
167 2935395321 2935390628 Bacteria 7043367
168 2935891221 2935890801 Bacteria 4593001
169 2935891327 2935890801 Bacteria 4593001
170 2939745829 2939743619 Bacteria 5762299
171 2946046957 2946045630 Bacteria 8527308
172 2966599975 2966598605 Bacteria 7676064
173 2966601635 2966598605 Bacteria 7676064
174 2990045312 2990044586 Bacteria 6603797
175 2997459482 2997451912 Bacteria 8492419
176 2997607796 2997600082 Bacteria 9896405
177 3006491815 3006486233 Bacteria 8157040
178 8001787109 8001781756 Bacteria 9586736
179 8003857299 8003856774 Bacteria 7675274
180 8003860772 8003856774 Bacteria 7675274
181 8008581228 8008574985 Bacteria 7815457
182 8023630955 8023623736 Bacteria 8593882
183 8025417918 8025413630 Bacteria 7014048
184 8025485312 8025478263 Bacteria 8209203
185 8048412739 8048406513 Bacteria 8936924
186 8056065304 8056060235 Bacteria 7259403
187 8057347337 8057345674 Bacteria 4160394
188 JGI25164J39214_1000385
189 JGI25165J46597_1000014
190 JGI25160J50197_1011208
191 JGI25160J50197_1016659
192 Ga0006562J51391_1058481
193 Ga0006562J51391_1058485
194 Ga0065714_10096675
195 Ga0105243_10001032
196 Ga0157375_10085643
197 Ga0207427_100041
198 Ga0209437_100267
199 Ga0209233_1000014
200 Ga0207426_1001265
201 Ga0207426_1007943
202 Ga0207709_10000888
203 Ga0307515_10060432
204 Ga0307413_10000606
205 Ga0307518_10012935
206 Ga0395900_0104807
207 Ga0395901_0087347
208 Ga0495603_0003120
209 Ga0495603_0003639
210 Ga0495603_0004675
211 Ga0495629_0001163
212 Ga0495629_0009748
213 Ga0495629_0062145
214 Ga0495651_0001046
215 Ga0495639_0015360
216 Ga0495662_0028629
217 Ga0495594_0093242
218 Ga0495628_0072410
219 Ga0495652_0005061
220 Ga0495652_0069376
221 Ga0495640_0126169
222 Ga0495657_0070774
223 Ga0495613_0001724
224 Ga0495613_0002506
225 Ga0495604_0031088
226 Ga0495676_0067679
227 Ga0495680_0022343
228 Ga0495614_0000355
229 Ga0495614_0005847
230 Ga0496119_0000786
231 Ga0496120_0000336
232 Ga0501032_0010377
233 Ga0501032_0052113
234 Ga0501033_0020638
235 Ga0501033_0049399
236 Ga0501034_0034411
237 Ga0501034_0070106
238 Ga0501034_0199765
239 Ga0501034_0396873
240 Ga0501034_0460497
241 Ga0501036_0164483
242 Ga0501036_0317251
243 Ga0501037_0014869
244 Ga0501037_0059700
245 Ga0501037_0154889
246 Ga0501038_0243804
247 Ga0501039_0118052
248 Ga0501040_0009286
249 Ga0501041_0002524
250 Ga0501042_0113770
251 Ga0501043_0003523
252 Ga0501043_0068734
253 Ga0501046_0085278
254 Ga0501047_0001896
255 Ga0501047_0014181
256 Ga0501047_0086624
257 Ga0501067_0000635
258 Ga0501067_0006358
259 Ga0501068_0003797
260 Ga0501068_0140763
261 Ga0501069_0019418
262 Ga0501070_0007120
263 Ga0501070_0023446
264 Ga0501070_0055627
265 Ga0501071_0053448
266 Ga0501072_0002076
267 Ga0501072_0016021
268 Ga0501073_0003593
269 Ga0501073_0005531
270 Ga0501073_0055843
271 Ga0501074_0030427
272 Ga0501074_0100281
273 Ga0501074_0185953
274 Ga0501076_0251767
275 Ga0501077_0123444
276 Ga0501079_0002415
277 Ga0501079_0197761
278 Ga0501083_0004294
279 Ga0501035_0001036
280 Ga0501035_0056693
281 Ga0501044_0002582
282 Ga0501044_0015404
283 Ga0501044_0026379
284 Ga0501045_0015691
285 nmdc:mga03n38_19595_c1
286 nmdc:mga07m45_27844_c1
287 Ga0501084_0015697
288 Ga0530510_0221901
289 2753072999
290 2552110805
291 2554260636
292 2566997229
293 2585297186
294 2585298826
295 2586061064
296 2616902600
297 2616902720
298 2643760591
299 2643761965
300 2643826101
301 2643901189
302 2643903879
303 2643942839
304 2644019278
305 2644081796
306 2644084595
307 2644174186
308 2644388089
309 2644402231
310 2644407333
311 2644430298
312 2644460608
313 2644514012
314 2644532092
315 2644665162
316 2644667207
317 2738891793
318 2738891968
319 2739204174
320 2739205771
321 2739238160
322 2784473358
323 2804846836
324 2808903274
325 2809230137
326 2809589897
327 2811843621
328 2812478473
329 2819698388
330 2819743768
331 2855684329
332 2858904364
333 2861521734
334 2862183908
335 2862290321
336 2862294985
337 2862514286
338 2873153183
339 2873316884
340 2875397553
341 2884763798
342 2887447771
343 2889303282
344 2895663152
345 2904536297
346 2912728864
347 2915771747
348 2917740839
349 2918507384
350 2919051940
351 2922558226
352 2928144139
353 2928145061
354 2935395321
355 2935891221
356 2935891327
357 2939745829
358 2946046957
359 2966599975
360 2966601635
361 2990045312
362 2997459482
363 2997607796
364 3006491815
365 8001787109
366 8003857299
367 8003860772
368 8008581228
369 8023630955
370 8025417918
371 8025485312
372 8048412739
373 8056065304
374 8057347337

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02687

FtsX

FtsX-like permease family

295

406

0.96

PF12704

MacB_PCD

MacB-like periplasmic core domain

67

272

0.64

Structural Annotation

Top 5 Hits

ID Description Score Start End
7w7c-assembly1.cif.gz_B-2 heme exporter in the unliganded form 0.7525 238 361
8i6q-assembly1.cif.gz_A cryo-em structure of pseudomonas aeruginosa ftse(wt)x complex in peptidisc 0.6744 237 350
5udf-assembly1.cif.gz_B structure of the n-terminal domain of lipoprotein-releasing system transmembrane protein lole from acinetobacter baumannii 0.6629 31 225
3ftj-assembly1.cif.gz_A crystal structure of the periplasmic region of macb from actinobacillus actinomycetemcomitans 0.6581 36 227
5f9q-assembly1.cif.gz_A crystal structure of the extracellular domain of noncanonic abc-type transporter yknz from gram-positive bacteria 0.6571 37 225
ID Description Score Start End Superfamily
1ivsA03 Alpha Beta;Alpha-Beta Complex;Isoleucyl-tRNA Synthetase; domain 2;Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain 0.53 74 164 3.90.740.10
af_Q2FXR8_200_287_3.90.740.10 Alpha Beta;Alpha-Beta Complex;Isoleucyl-tRNA Synthetase; domain 2;Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain 0.519 116 164 3.90.740.10
af_Q5ACZ4_387_544_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.5089 237 360 1.20.1250.20
af_Q96KV7_1_193_2.60.120.430 Mainly Beta;Sandwich;Jelly Rolls;Galactose-binding lectin 0.5062 73 96 2.60.120.430
af_Q9LUH3_262_425_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.4884 235 361 1.20.1250.20
ID Description Score Start End GO Terms
AF-A0A7C6VC99-F1-model_v4 ABC transporter permease 0.9382 234 360 GO:0005886
AF-A0A561V4M4-F1-model_v4 FtsX-like permease family protein 0.9325 246 364 GO:0005886
AF-A0A644XW07-F1-model_v4 ABC3 transporter permease C-terminal domain-containing protein 0.9317 249 361 GO:0005886
AF-A0A2V9ZDA6-F1-model_v4 ABC transporter permease 0.9165 242 360 GO:0005886
GO:0022857
AF-A0A1Q7N3F1-F1-model_v4 ABC3 transporter permease C-terminal domain-containing protein 0.9055 235 360 GO:0005886
GO:0022857

Map