F288412
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 187 | 151 | 153 | 231 |
Family's Representative Sequence
| Representative Sequence | 3300049761|Ga0501264_000268|Ga0501264_000268_6714_7568 |
| Length | 272 |
| Sequence | VIYVLIKDATTRHLCIVIIQKKRMKTGRNILLTAVLLLQIFTAYAQSAILFVLTSHDQLGNTGEKTGFWIEEFASPYYALTDQGIDVTIASPKGGQPPIDPKSNLPEFSTPSTKRFNGDPQTQNKLAHTVTLKDVDQKNFDAVFYPGGHGPLWDLAEDKRSIQLIESFYNNNKPIAFVCHAPGVLKNVKDKTGAYLVKGKKVTGFKNTEEAAVQLTDVVPFLLEDVLKQNGAEFQSGDDWKPFVVADGLLITGQNPASSEAVAEKLVEYLKR |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2501025501 | Paraburkholderia silvatlantica PVA5 | Isolate | Unclassified |
| 2 | 2501025504 | Paraburkholderia silvatlantica SRMrh-20 | Isolate | Unclassified |
| 3 | 2510917014 | Paraburkholderia silvatlantica SRMrh-20 | Isolate | Unclassified |
| 4 | 2510917015 | Paraburkholderia silvatlantica PVA5 | Isolate | Unclassified |
| 5 | 2511231004 | Pseudomonas sp. GM102 | Isolate | Nodule |
| 6 | 2511231016 | Pseudomonas sp. GM50 | Isolate | Nodule |
| 7 | 2511231022 | Pseudomonas sp. GM79 | Isolate | Nodule |
| 8 | 2513237083 | Paraburkholderia mimosarum LMG 23256 | Isolate | Nodule |
| 9 | 2515154189 | Paraburkholderia nodosa DSM 21604 | Isolate | Unclassified |
| 10 | 2523533629 | Kaistella palustris DSM 21579 | Isolate | Rhizosphere |
| 11 | 2524023209 | Rhizobium leucaenae USDA 9039 | Isolate | Nodule |
| 12 | 2582581299 | Rhizobium leguminosarum OV483 | Isolate | Rhizosphere |
| 13 | 2585428060 | Chryseobacterium sp. OV715 | Isolate | Rhizosphere |
| 14 | 2588253712 | Chryseobacterium sp. OV279 | Isolate | Rhizosphere |
| 15 | 2599185292 | Achromobacter sp. NFACC18-2 | Isolate | Rhizoplane |
| 16 | 2643221569 | Achromobacter sp. Root565 | Isolate | Unclassified |
| 17 | 2643221634 | Rhizobium sp. Root1203 | Isolate | Unclassified |
| 18 | 2643221644 | Rhizobacter sp. Root1221 | Isolate | Unclassified |
| 19 | 2721755763 | Pandoraea thiooxydans ATSB16 | Isolate | Rhizosphere |
| 20 | 2738541283 | Pedobacter sp. OK701 | Isolate | Unclassified |
| 21 | 2808606379 | Pseudomonas sp. SJZ079 | Isolate | Rhizosphere |
| 22 | 2842298080 | Rhizobium leucaenae SEMIA 492 | Isolate | Nodule |
| 23 | 2842357229 | Rhizobium leucaenae SEMIA 4015 | Isolate | Nodule |
| 24 | 2842509118 | Rhizobium paranaense SEMIA 4064 | Isolate | Nodule |
| 25 | 2842698319 | Methylobacterium sp. R-72139 | Isolate | Unclassified |
| 26 | 2881927736 | Candidimonas sp. SYP-B2681 | Isolate | Rhizosphere |
| 27 | 2883087390 | Paraburkholderia guartelaensis CNPSo 3008 | Isolate | Unclassified |
| 28 | 2916178963 | Pseudoalteromonas rhizosphaerae RA15 | Isolate | Rhizosphere |
| 29 | 2929177148 | Chitinophaga sp. R-72269 Hybrid assembly | Isolate | Unclassified |
| 30 | 2945977869 | Chitinophaga sp. W2I13 | Isolate | Rhizosphere |
| 31 | 2946013367 | Chitinophaga sp. W3I9 | Isolate | Rhizosphere |
| 32 | 3300003316 | Sugarcane root Sample L1 | Metagenome | Unclassified |
| 33 | 3300003320 | Sugarcane root Sample H2 | Metagenome | Unclassified |
| 34 | 3300003322 | Sugarcane root Sample L2 | Metagenome | Unclassified |
| 35 | 3300003323 | Sugarcane root Sample H1 | Metagenome | Unclassified |
| 36 | 3300003771 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 | Metagenome | Endosphere |
| 37 | 3300003781 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 | Metagenome | Endosphere |
| 38 | 3300003784 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 | Metagenome | Endosphere |
| 39 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 40 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 41 | 3300006028 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG | Metagenome | Rhizosphere |
| 42 | 3300006358 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 | Metagenome | Rhizosphere |
| 43 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 44 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 45 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 46 | 3300014497 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG | Metagenome | Rhizosphere |
| 47 | 3300015262 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG | Metagenome | Rhizosphere |
| 48 | 3300020080 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 49 | 3300021361 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 | Metagenome | Rhizosphere |
| 50 | 3300025291 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 51 | 3300025292 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 52 | 3300025294 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) | Metagenome | Endosphere |
| 53 | 3300025295 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 54 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 55 | 3300031548 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 | Metagenome | Rhizosphere |
| 56 | 3300031731 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 | Metagenome | Rhizosphere |
| 57 | 3300031824 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 | Metagenome | Rhizosphere |
| 58 | 3300031852 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 | Metagenome | Rhizosphere |
| 59 | 3300031901 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 | Metagenome | Rhizosphere |
| 60 | 3300031911 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 | Metagenome | Rhizosphere |
| 61 | 3300031995 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 | Metagenome | Rhizosphere |
| 62 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 63 | 3300032004 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 | Metagenome | Rhizosphere |
| 64 | 3300032005 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 | Metagenome | Rhizosphere |
| 65 | 3300035691 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 | Metagenome | Rhizosphere |
| 66 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 67 | 3300038741 | Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 | Metagenome | Unclassified |
| 68 | 3300039447 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 | Metagenome | Rhizosphere |
| 69 | 3300042006 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 | Metagenome | Rhizosphere |
| 70 | 3300042009 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0220FE14Z071817_5348 | Metagenome | Rhizosphere |
| 71 | 3300042121 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0515D_E14_082716_2398 | Metagenome | Rhizosphere |
| 72 | 3300042127 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC1030F_E14_070516_91 | Metagenome | Rhizosphere |
| 73 | 3300042138 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 | Metagenome | Rhizosphere |
| 74 | 3300042145 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 | Metagenome | Rhizosphere |
| 75 | 3300042146 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0714D_E14_080116_2979 | Metagenome | Rhizosphere |
| 76 | 3300042439 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 | Metagenome | Rhizosphere |
| 77 | 3300042531 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0117D_E14_082716_2253 | Metagenome | Rhizosphere |
| 78 | 3300046452 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere | Metagenome | Rhizosphere |
| 79 | 3300046457 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere | Metagenome | Rhizosphere |
| 80 | 3300046460 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere | Metagenome | Rhizosphere |
| 81 | 3300046471 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere | Metagenome | Rhizosphere |
| 82 | 3300046491 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere | Metagenome | Rhizosphere |
| 83 | 3300046501 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere | Metagenome | Rhizosphere |
| 84 | 3300046506 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere | Metagenome | Rhizosphere |
| 85 | 3300046513 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere | Metagenome | Rhizosphere |
| 86 | 3300046519 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere | Metagenome | Rhizosphere |
| 87 | 3300046520 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere | Metagenome | Rhizosphere |
| 88 | 3300046522 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere | Metagenome | Rhizosphere |
| 89 | 3300046524 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere | Metagenome | Rhizosphere |
| 90 | 3300046528 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere | Metagenome | Rhizosphere |
| 91 | 3300046538 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere | Metagenome | Rhizosphere |
| 92 | 3300046558 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere | Metagenome | Rhizosphere |
| 93 | 3300046648 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere | Metagenome | Rhizosphere |
| 94 | 3300046664 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere | Metagenome | Rhizosphere |
| 95 | 3300046691 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere | Metagenome | Rhizosphere |
| 96 | 3300046692 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere | Metagenome | Rhizosphere |
| 97 | 3300046694 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere | Metagenome | Rhizosphere |
| 98 | 3300046794 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere | Metagenome | Rhizosphere |
| 99 | 3300046809 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere | Metagenome | Rhizosphere |
| 100 | 3300046810 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere | Metagenome | Rhizosphere |
| 101 | 3300047317 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere | Metagenome | Rhizosphere |
| 102 | 3300047318 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere | Metagenome | Rhizosphere |
| 103 | 3300047320 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere | Metagenome | Rhizosphere |
| 104 | 3300047323 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere | Metagenome | Rhizosphere |
| 105 | 3300047443 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere | Metagenome | Rhizosphere |
| 106 | 3300047445 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere | Metagenome | Rhizosphere |
| 107 | 3300047447 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere | Metagenome | Rhizosphere |
| 108 | 3300047469 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere | Metagenome | Rhizosphere |
| 109 | 3300047471 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere | Metagenome | Rhizosphere |
| 110 | 3300047472 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere | Metagenome | Rhizosphere |
| 111 | 3300048091 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere | Metagenome | Rhizosphere |
| 112 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 113 | 3300048914 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 | Metagenome | Rhizoplane |
| 114 | 3300048919 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled | Metagenome | Unclassified |
| 115 | 3300048926 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled | Metagenome | Unclassified |
| 116 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 117 | 3300049459 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere | Metagenome | Rhizosphere |
| 118 | 3300049460 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere | Metagenome | Rhizosphere |
| 119 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 120 | 3300049573 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 121 | 3300049574 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 122 | 3300049575 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 123 | 3300049576 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 124 | 3300049577 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 125 | 3300049578 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 126 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 127 | 3300049580 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 128 | 3300049582 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 129 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 130 | 3300049587 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 | Metagenome | Rhizosphere |
| 131 | 3300049588 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 | Metagenome | Rhizosphere |
| 132 | 3300049591 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 | Metagenome | Rhizosphere |
| 133 | 3300049592 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 | Metagenome | Rhizosphere |
| 134 | 3300049593 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 | Metagenome | Rhizosphere |
| 135 | 3300049668 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought | Metagenome | Rhizosphere |
| 136 | 3300049670 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_B_2_drought | Metagenome | Rhizosphere |
| 137 | 3300049677 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_A_3_control | Metagenome | Rhizosphere |
| 138 | 3300049686 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control | Metagenome | Rhizosphere |
| 139 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 140 | 3300049743 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 | Metagenome | Rhizosphere |
| 141 | 3300049761 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I14_A_4_control | Metagenome | Rhizosphere |
| 142 | 3300049769 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C13_B_4_drought | Metagenome | Rhizosphere |
| 143 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 144 | 3300053125 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere | Metagenome | Endosphere |
| 145 | 3300053158 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere | Metagenome | Endosphere |
| 146 | 3300053730 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere | Metagenome | Endosphere |
| 147 | 3300054114 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 | Metagenome | Rhizosphere |
| 148 | 3300060353 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 | Metagenome | Rhizosphere |
| 149 | 3300061734 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) | Metagenome | Rhizosphere |
| 150 | 8002745576 | Marinomonas spartinae USM8 | Isolate | Rhizosphere |
| 151 | 8003955200 | Paraburkholderia mimosarum LMG 23256 | Isolate | Nodule |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 81.28 |
| Metatranscriptomes | 0.53 |
| Isolates | 18.18 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 6.42 |
| Nodule | 4.81 |
| Rhizoplane | 1.6 |
| Rhizosphere | 74.87 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 12.3 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | rootH1_10033260 | 3300003316 | Bacteria | 32873 |
| 2 | rootH1_10073884 | 3300003316 | Bacteria | 5031 |
| 3 | rootH2_10153571 | 3300003320 | Bacteria | 1701 |
| 4 | rootH2_10180610 | 3300003320 | Bacteria | 1460 |
| 5 | rootL2_10053297 | 3300003322 | Bacteria | 5688 |
| 6 | rootH1_10006905 | 3300003323 | Bacteria | 4155 |
| 7 | rootH1_10054477 | 3300003323 | Bacteria | 26781 |
| 8 | Ga0055526_1001971 | 3300003771 | Bacteria | 14170 |
| 9 | Ga0055526_1004436 | 3300003771 | Bacteria | 8432 |
| 10 | Ga0055536_1000879 | 3300003781 | Bacteria | 19531 |
| 11 | Ga0055534_1000199 | 3300003784 | Bacteria | 44113 |
| 12 | Ga0068856_100040676 | 3300005614 | Bacteria | 4567 |
| 13 | Ga0068863_100364484 | 3300005841 | Bacteria | 1409 |
| 14 | Ga0070717_10665013 | 3300006028 | Bacteria | 946 |
| 15 | Ga0068871_100343613 | 3300006358 | Bacteria | 1318 |
| 16 | Ga0097620_100273726 | 3300006931 | Bacteria | 1781 |
| 17 | Ga0157370_10386598 | 3300013104 | Bacteria | 1288 |
| 18 | Ga0157372_10265683 | 3300013307 | Bacteria | 1993 |
| 19 | Ga0182008_10024426 | 3300014497 | Bacteria | 3078 |
| 20 | Ga0182007_10010844 | 3300015262 | Bacteria | 3578 |
| 21 | Ga0206350_11609373 | 3300020080 | Bacteria | 1026 |
| 22 | Ga0213872_10035388 | 3300021361 | Bacteria | 2284 |
| 23 | Ga0213872_10073062 | 3300021361 | Bacteria | 1545 |
| 24 | Ga0209675_1000087 | 3300025291 | Bacteria | 147632 |
| 25 | Ga0209676_1000144 | 3300025292 | Bacteria | 175244 |
| 26 | Ga0209025_1000046 | 3300025294 | Bacteria | 348962 |
| 27 | Ga0209564_1000276 | 3300025295 | Bacteria | 106851 |
| 28 | Ga0209564_1000434 | 3300025295 | Bacteria | 72534 |
| 29 | Ga0207667_10102461 | 3300025949 | Bacteria | 2953 |
| 30 | Ga0307408_100165398 | 3300031548 | Bacteria | 1761 |
| 31 | Ga0307408_100422392 | 3300031548 | Bacteria | 1150 |
| 32 | Ga0307405_10635394 | 3300031731 | Bacteria | 876 |
| 33 | Ga0307413_10100640 | 3300031824 | Bacteria | 1909 |
| 34 | Ga0307410_10170152 | 3300031852 | Bacteria | 1641 |
| 35 | Ga0307406_10132212 | 3300031901 | Bacteria | 1754 |
| 36 | Ga0307412_10420571 | 3300031911 | Bacteria | 1093 |
| 37 | Ga0307409_100614649 | 3300031995 | Bacteria | 1076 |
| 38 | Ga0307409_100898639 | 3300031995 | Bacteria | 899 |
| 39 | Ga0307416_100315534 | 3300032002 | Bacteria | 1562 |
| 40 | Ga0307414_10075369 | 3300032004 | Bacteria | 2448 |
| 41 | Ga0307414_10766883 | 3300032004 | Bacteria | 878 |
| 42 | Ga0307411_10229148 | 3300032005 | Bacteria | 1447 |
| 43 | Ga0373931_0029497 | 3300035691 | Bacteria | 2817 |
| 44 | Ga0395905_0000242 | 3300037471 | Bacteria | 82835 |
| 45 | Ga0400488_24272 | 3300038741 | Bacteria | 1772 |
| 46 | Ga0436361_0074731 | 3300039447 | Bacteria | 12211 |
| 47 | Ga0436361_0494143 | 3300039447 | Bacteria | 19325 |
| 48 | Ga0436361_0664887 | 3300039447 | Bacteria | 6560 |
| 49 | Ga0439432_051380 | 3300042006 | Bacteria | 1285 |
| 50 | Ga0439451_000868 | 3300042009 | Bacteria | 5793 |
| 51 | Ga0439451_001825 | 3300042009 | Bacteria | 4261 |
| 52 | Ga0439451_007054 | 3300042009 | Bacteria | 2296 |
| 53 | Ga0450919_000233 | 3300042121 | Bacteria | 6238 |
| 54 | Ga0450890_002439 | 3300042127 | Bacteria | 2560 |
| 55 | Ga0450903_003472 | 3300042138 | Bacteria | 2728 |
| 56 | Ga0450906_009544 | 3300042145 | Bacteria | 1848 |
| 57 | Ga0450907_000635 | 3300042146 | Bacteria | 9293 |
| 58 | Ga0439464_0038048 | 3300042439 | Bacteria | 1366 |
| 59 | Ga0450918_000062 | 3300042531 | Bacteria | 21831 |
| 60 | Ga0495617_000521 | 3300046452 | Bacteria | 19980 |
| 61 | Ga0495590_0005377 | 3300046457 | Bacteria | 5081 |
| 62 | Ga0495638_0004808 | 3300046460 | Bacteria | 10176 |
| 63 | Ga0495650_0007755 | 3300046471 | Bacteria | 6387 |
| 64 | Ga0495584_0012082 | 3300046491 | Bacteria | 4413 |
| 65 | Ga0495584_0069805 | 3300046491 | Bacteria | 1765 |
| 66 | Ga0495607_0002149 | 3300046501 | Bacteria | 16436 |
| 67 | Ga0495607_0025796 | 3300046501 | Bacteria | 3652 |
| 68 | Ga0495583_0001124 | 3300046506 | Bacteria | 29443 |
| 69 | Ga0495583_0094145 | 3300046506 | Bacteria | 1286 |
| 70 | Ga0495616_0001316 | 3300046513 | Bacteria | 17332 |
| 71 | Ga0495632_0014622 | 3300046519 | Bacteria | 4432 |
| 72 | Ga0495632_0118491 | 3300046519 | Bacteria | 1238 |
| 73 | Ga0495637_0014334 | 3300046520 | Bacteria | 3739 |
| 74 | Ga0495643_0003926 | 3300046522 | Bacteria | 10652 |
| 75 | Ga0495643_0016760 | 3300046522 | Bacteria | 4300 |
| 76 | Ga0495648_0165798 | 3300046524 | Bacteria | 1137 |
| 77 | Ga0495642_0006938 | 3300046528 | Bacteria | 4345 |
| 78 | Ga0495609_0011149 | 3300046538 | Bacteria | 4290 |
| 79 | Ga0495633_0134772 | 3300046558 | Bacteria | 1142 |
| 80 | Ga0495611_0002085 | 3300046648 | Bacteria | 9397 |
| 81 | Ga0495659_0034139 | 3300046664 | Bacteria | 1788 |
| 82 | Ga0495670_0132071 | 3300046691 | Bacteria | 1302 |
| 83 | Ga0495671_0068016 | 3300046692 | Bacteria | 1751 |
| 84 | Ga0495649_0001819 | 3300046694 | Bacteria | 15663 |
| 85 | Ga0495649_0078887 | 3300046694 | Bacteria | 1761 |
| 86 | Ga0495589_0000222 | 3300046794 | Bacteria | 48332 |
| 87 | Ga0495600_0022884 | 3300046809 | Bacteria | 4017 |
| 88 | Ga0495660_0159540 | 3300046810 | Bacteria | 1107 |
| 89 | Ga0495604_0091551 | 3300047317 | Bacteria | 2255 |
| 90 | Ga0495636_0003530 | 3300047318 | Bacteria | 6061 |
| 91 | Ga0495672_0002817 | 3300047320 | Bacteria | 15489 |
| 92 | Ga0495672_0004319 | 3300047320 | Bacteria | 11706 |
| 93 | Ga0495683_0017102 | 3300047323 | Bacteria | 3761 |
| 94 | Ga0495687_011128 | 3300047443 | Bacteria | 4861 |
| 95 | Ga0495677_0000170 | 3300047445 | Bacteria | 31449 |
| 96 | Ga0495677_0005180 | 3300047445 | Bacteria | 4959 |
| 97 | Ga0495685_034119 | 3300047447 | Bacteria | 1748 |
| 98 | Ga0495673_0012551 | 3300047469 | Bacteria | 4485 |
| 99 | Ga0495684_0175704 | 3300047471 | Bacteria | 1590 |
| 100 | Ga0495686_0001186 | 3300047472 | Bacteria | 30396 |
| 101 | Ga0495626_0012026 | 3300048091 | Bacteria | 4554 |
| 102 | Ga0495626_0065199 | 3300048091 | Bacteria | 1648 |
| 103 | Ga0495626_0102054 | 3300048091 | Bacteria | 1249 |
| 104 | Ga0496110_0000519 | 3300048913 | Bacteria | 26219 |
| 105 | Ga0496111_0164083 | 3300048914 | Bacteria | 1650 |
| 106 | Ga0496116_0219136 | 3300048919 | Bacteria | 977 |
| 107 | Ga0496123_0022254 | 3300048926 | Bacteria | 4892 |
| 108 | Ga0496125_0040852 | 3300048928 | Bacteria | 3973 |
| 109 | Ga0495678_010401 | 3300049459 | Bacteria | 4526 |
| 110 | Ga0495678_106818 | 3300049459 | Bacteria | 961 |
| 111 | Ga0495682_0080879 | 3300049460 | Bacteria | 1168 |
| 112 | Ga0501036_0088455 | 3300049572 | Bacteria | 2618 |
| 113 | Ga0501036_0771574 | 3300049572 | Bacteria | 792 |
| 114 | Ga0501037_0140421 | 3300049573 | Bacteria | 1729 |
| 115 | Ga0501038_0095256 | 3300049574 | Bacteria | 2487 |
| 116 | Ga0501039_0257414 | 3300049575 | Bacteria | 1372 |
| 117 | Ga0501040_0038514 | 3300049576 | Bacteria | 3250 |
| 118 | Ga0501040_0428752 | 3300049576 | Bacteria | 951 |
| 119 | Ga0501041_0021717 | 3300049577 | Bacteria | 3844 |
| 120 | Ga0501041_0213169 | 3300049577 | Bacteria | 1211 |
| 121 | Ga0501042_0093244 | 3300049578 | Bacteria | 2162 |
| 122 | Ga0501043_0360245 | 3300049579 | Bacteria | 1104 |
| 123 | Ga0501046_0039970 | 3300049580 | Bacteria | 3752 |
| 124 | Ga0501048_0062023 | 3300049582 | Bacteria | 2647 |
| 125 | Ga0501048_0104477 | 3300049582 | Bacteria | 1999 |
| 126 | Ga0501070_0713624 | 3300049586 | Bacteria | 792 |
| 127 | Ga0501071_0039724 | 3300049587 | Bacteria | 3366 |
| 128 | Ga0501071_0236100 | 3300049587 | Bacteria | 1378 |
| 129 | Ga0501072_0356839 | 3300049588 | Bacteria | 1160 |
| 130 | Ga0501075_0037095 | 3300049591 | Bacteria | 3640 |
| 131 | Ga0501076_0017382 | 3300049592 | Bacteria | 5466 |
| 132 | Ga0501076_0485074 | 3300049592 | Bacteria | 1018 |
| 133 | Ga0501077_0314780 | 3300049593 | Bacteria | 998 |
| 134 | Ga0501077_0524915 | 3300049593 | Bacteria | 759 |
| 135 | Ga0501233_011288 | 3300049668 | Bacteria | 1774 |
| 136 | Ga0501236_014242 | 3300049670 | Bacteria | 1098 |
| 137 | Ga0501247_011431 | 3300049677 | Bacteria | 1070 |
| 138 | Ga0501257_003187 | 3300049686 | Bacteria | 3497 |
| 139 | Ga0501080_0008804 | 3300049742 | Bacteria | 9173 |
| 140 | Ga0501081_0109631 | 3300049743 | Bacteria | 1958 |
| 141 | Ga0501081_0339848 | 3300049743 | Bacteria | 1105 |
| 142 | Ga0501264_000268 | 3300049761 | Bacteria | 8181 |
| 143 | Ga0501272_020227 | 3300049769 | Bacteria | 796 |
| 144 | Ga0501035_0523772 | 3300049822 | Bacteria | 974 |
| 145 | Ga0501035_0680079 | 3300049822 | Bacteria | 832 |
| 146 | Ga0500618_003878 | 3300053125 | Bacteria | 4978 |
| 147 | Ga0500627_0055528 | 3300053158 | Bacteria | 1734 |
| 148 | Ga0500645_071722 | 3300053730 | Bacteria | 994 |
| 149 | Ga0501084_0309410 | 3300054114 | Bacteria | 1334 |
| 150 | Ga0501084_0339291 | 3300054114 | Bacteria | 1269 |
| 151 | Ga0501082_0032220 | 3300060353 | Bacteria | 4520 |
| 152 | Ga0530510_0031070 | 3300061734 | Bacteria | 3839 |
| 153 | Ga0530510_0060003 | 3300061734 | Bacteria | 2752 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300006028 | Ga0070717_10665013 | Ga0070717_106650131 | 209 |
| 2 | 3300046506 | Ga0495583_0001124 | Ga0495583_0001124_3514_4173 | 219 |
| 3 | iso_pu_bacteria | 2524023209 | 2524460130 | 220 |
| 4 | iso_pu_bacteria | 2842298080 | 2842298644 | 220 |
| 5 | iso_pu_bacteria | 2842357229 | 2842359489 | 220 |
| 6 | 3300042009 | Ga0439451_007054 | Ga0439451_007054_12_677 | 221 |
| 7 | 3300049582 | Ga0501048_0062023 | Ga0501048_0062023_324_989 | 221 |
| 8 | iso_pu_bacteria | 2511231004 | 2511255344 | 221 |
| 9 | iso_pu_bacteria | 2511231016 | 2511328381 | 221 |
| 10 | iso_pu_bacteria | 2511231022 | 2511364133 | 221 |
| 11 | iso_pu_bacteria | 2523533629 | 2524005717 | 221 |
| 12 | iso_pu_bacteria | 2582581299 | 2585228070 | 221 |
| 13 | iso_pu_bacteria | 2643221634 | 2644195664 | 221 |
| 14 | iso_pu_bacteria | 2881927736 | 2881930925 | 221 |
| 15 | iso_pu_bacteria | 2929177148 | 2929180858 | 221 |
| 16 | iso_pu_bacteria | 2945977869 | 2945983258 | 221 |
| 17 | iso_pu_bacteria | 2946013367 | 2946017352 | 221 |
| 18 | iso_pu_bacteria | 2643221569 | 2643859544 | 222 |
| 19 | iso_pu_bacteria | 2738541283 | 2738756480 | 222 |
| 20 | iso_pu_bacteria | 2501025501 | 2501072067 | 223 |
| 21 | iso_pu_bacteria | 2501025504 | 2501411874 | 223 |
| 22 | iso_pu_bacteria | 2510917014 | 2511100877 | 223 |
| 23 | iso_pu_bacteria | 2510917015 | 2511107364 | 223 |
| 24 | iso_pu_bacteria | 2513237083 | 2513564971 | 223 |
| 25 | iso_pu_bacteria | 2515154189 | 2516020399 | 223 |
| 26 | iso_pu_bacteria | 2721755763 | 2723878037 | 223 |
| 27 | iso_pu_bacteria | 2842698319 | 2842699096 | 223 |
| 28 | iso_pu_bacteria | 2883087390 | 2883089544 | 223 |
| 29 | iso_pu_bacteria | 2916178963 | 2916180307 | 223 |
| 30 | iso_pu_bacteria | 8003955200 | 8003960342 | 223 |
| 31 | 3300047320 | Ga0495672_0002817 | Ga0495672_0002817_4321_4995 | 224 |
| 32 | 3300049459 | Ga0495678_106818 | Ga0495678_106818_97_771 | 224 |
| 33 | iso_pu_bacteria | 2599185292 | 2599902154 | 224 |
| 34 | iso_pu_bacteria | 2643221644 | 2644248330 | 224 |
| 35 | iso_pu_bacteria | 2808606379 | 2808943013 | 224 |
| 36 | 3300003320 | rootH2_10153571 | rootH2_101535711 | 225 |
| 37 | 3300003323 | rootH1_10006905 | rootH1_100069054 | 225 |
| 38 | 3300031731 | Ga0307405_10635394 | Ga0307405_106353941 | 225 |
| 39 | 3300031995 | Ga0307409_100898639 | Ga0307409_1008986391 | 225 |
| 40 | 3300038741 | Ga0400488_24272 | Ga0400488_24272_238_915 | 225 |
| 41 | 3300042006 | Ga0439432_051380 | Ga0439432_051380_293_970 | 225 |
| 42 | 3300042009 | Ga0439451_000868 | Ga0439451_000868_4426_5103 | 225 |
| 43 | 3300042009 | Ga0439451_001825 | Ga0439451_001825_2607_3284 | 225 |
| 44 | 3300042127 | Ga0450890_002439 | Ga0450890_002439_1391_2068 | 225 |
| 45 | 3300042138 | Ga0450903_003472 | Ga0450903_003472_1450_2127 | 225 |
| 46 | 3300042145 | Ga0450906_009544 | Ga0450906_009544_712_1389 | 225 |
| 47 | 3300042146 | Ga0450907_000635 | Ga0450907_000635_726_1403 | 225 |
| 48 | 3300042439 | Ga0439464_0038048 | Ga0439464_0038048_657_1334 | 225 |
| 49 | 3300046452 | Ga0495617_000521 | Ga0495617_000521_18259_18936 | 225 |
| 50 | 3300046457 | Ga0495590_0005377 | Ga0495590_0005377_3680_4357 | 225 |
| 51 | 3300046471 | Ga0495650_0007755 | Ga0495650_0007755_5187_5864 | 225 |
| 52 | 3300046491 | Ga0495584_0012082 | Ga0495584_0012082_735_1412 | 225 |
| 53 | 3300046491 | Ga0495584_0069805 | Ga0495584_0069805_740_1417 | 225 |
| 54 | 3300046501 | Ga0495607_0002149 | Ga0495607_0002149_1964_2641 | 225 |
| 55 | 3300046501 | Ga0495607_0025796 | Ga0495607_0025796_491_1168 | 225 |
| 56 | 3300046506 | Ga0495583_0094145 | Ga0495583_0094145_228_905 | 225 |
| 57 | 3300046513 | Ga0495616_0001316 | Ga0495616_0001316_16121_16798 | 225 |
| 58 | 3300046519 | Ga0495632_0014622 | Ga0495632_0014622_3001_3678 | 225 |
| 59 | 3300046520 | Ga0495637_0014334 | Ga0495637_0014334_230_907 | 225 |
| 60 | 3300046522 | Ga0495643_0016760 | Ga0495643_0016760_727_1404 | 225 |
| 61 | 3300046524 | Ga0495648_0165798 | Ga0495648_0165798_335_1012 | 225 |
| 62 | 3300046528 | Ga0495642_0006938 | Ga0495642_0006938_3015_3692 | 225 |
| 63 | 3300046538 | Ga0495609_0011149 | Ga0495609_0011149_2251_2928 | 225 |
| 64 | 3300046558 | Ga0495633_0134772 | Ga0495633_0134772_383_1060 | 225 |
| 65 | 3300046648 | Ga0495611_0002085 | Ga0495611_0002085_738_1415 | 225 |
| 66 | 3300046664 | Ga0495659_0034139 | Ga0495659_0034139_705_1382 | 225 |
| 67 | 3300046691 | Ga0495670_0132071 | Ga0495670_0132071_439_1116 | 225 |
| 68 | 3300046692 | Ga0495671_0068016 | Ga0495671_0068016_349_1026 | 225 |
| 69 | 3300046694 | Ga0495649_0001819 | Ga0495649_0001819_14233_14910 | 225 |
| 70 | 3300046794 | Ga0495589_0000222 | Ga0495589_0000222_748_1425 | 225 |
| 71 | 3300046810 | Ga0495660_0159540 | Ga0495660_0159540_389_1066 | 225 |
| 72 | 3300047318 | Ga0495636_0003530 | Ga0495636_0003530_1945_2622 | 225 |
| 73 | 3300047320 | Ga0495672_0004319 | Ga0495672_0004319_8114_8791 | 225 |
| 74 | 3300047323 | Ga0495683_0017102 | Ga0495683_0017102_182_859 | 225 |
| 75 | 3300047443 | Ga0495687_011128 | Ga0495687_011128_1067_1744 | 225 |
| 76 | 3300047447 | Ga0495685_034119 | Ga0495685_034119_347_1024 | 225 |
| 77 | 3300047469 | Ga0495673_0012551 | Ga0495673_0012551_631_1308 | 225 |
| 78 | 3300048091 | Ga0495626_0012026 | Ga0495626_0012026_3133_3810 | 225 |
| 79 | 3300048091 | Ga0495626_0102054 | Ga0495626_0102054_224_901 | 225 |
| 80 | 3300049459 | Ga0495678_010401 | Ga0495678_010401_751_1428 | 225 |
| 81 | 3300049460 | Ga0495682_0080879 | Ga0495682_0080879_476_1153 | 225 |
| 82 | 3300003771 | Ga0055526_1001971 | Ga0055526_100197113 | 226 |
| 83 | 3300003771 | Ga0055526_1004436 | Ga0055526_10044366 | 226 |
| 84 | 3300003781 | Ga0055536_1000879 | Ga0055536_10008795 | 226 |
| 85 | 3300003784 | Ga0055534_1000199 | Ga0055534_100019933 | 226 |
| 86 | 3300025291 | Ga0209675_1000087 | Ga0209675_100008787 | 226 |
| 87 | 3300025292 | Ga0209676_1000144 | Ga0209676_10001445 | 226 |
| 88 | 3300025294 | Ga0209025_1000046 | Ga0209025_1000046175 | 226 |
| 89 | 3300025295 | Ga0209564_1000276 | Ga0209564_100027650 | 226 |
| 90 | 3300025295 | Ga0209564_1000434 | Ga0209564_100043455 | 226 |
| 91 | 3300032004 | Ga0307414_10075369 | Ga0307414_100753692 | 226 |
| 92 | 3300035691 | Ga0373931_0029497 | Ga0373931_0029497_1026_1706 | 226 |
| 93 | 3300048928 | Ga0496125_0040852 | Ga0496125_0040852_3035_3715 | 226 |
| 94 | iso_pu_bacteria | 8002745576 | 8002747017 | 226 |
| 95 | 3300005841 | Ga0068863_100364484 | Ga0068863_1003644842 | 227 |
| 96 | 3300013104 | Ga0157370_10386598 | Ga0157370_103865982 | 227 |
| 97 | 3300013307 | Ga0157372_10265683 | Ga0157372_102656832 | 227 |
| 98 | 3300021361 | Ga0213872_10073062 | Ga0213872_100730622 | 227 |
| 99 | 3300031548 | Ga0307408_100422392 | Ga0307408_1004223922 | 227 |
| 100 | 3300032002 | Ga0307416_100315534 | Ga0307416_1003155342 | 227 |
| 101 | 3300032004 | Ga0307414_10766883 | Ga0307414_107668831 | 227 |
| 102 | 3300039447 | Ga0436361_0074731 | Ga0436361_0074731_3735_4418 | 227 |
| 103 | 3300039447 | Ga0436361_0664887 | Ga0436361_0664887_3153_3836 | 227 |
| 104 | 3300048919 | Ga0496116_0219136 | Ga0496116_0219136_236_919 | 227 |
| 105 | 3300049572 | Ga0501036_0088455 | Ga0501036_0088455_571_1254 | 227 |
| 106 | 3300049575 | Ga0501039_0257414 | Ga0501039_0257414_530_1213 | 227 |
| 107 | 3300049576 | Ga0501040_0428752 | Ga0501040_0428752_92_775 | 227 |
| 108 | 3300049577 | Ga0501041_0213169 | Ga0501041_0213169_257_940 | 227 |
| 109 | 3300049578 | Ga0501042_0093244 | Ga0501042_0093244_1018_1701 | 227 |
| 110 | 3300049587 | Ga0501071_0236100 | Ga0501071_0236100_456_1139 | 227 |
| 111 | 3300049592 | Ga0501076_0485074 | Ga0501076_0485074_50_733 | 227 |
| 112 | 3300049593 | Ga0501077_0314780 | Ga0501077_0314780_68_751 | 227 |
| 113 | 3300049743 | Ga0501081_0339848 | Ga0501081_0339848_240_923 | 227 |
| 114 | 3300049822 | Ga0501035_0523772 | Ga0501035_0523772_85_768 | 227 |
| 115 | 3300053125 | Ga0500618_003878 | Ga0500618_003878_2386_3069 | 227 |
| 116 | 3300054114 | Ga0501084_0339291 | Ga0501084_0339291_482_1165 | 227 |
| 117 | 3300061734 | Ga0530510_0060003 | Ga0530510_0060003_1406_2089 | 227 |
| 118 | 3300005614 | Ga0068856_100040676 | Ga0068856_1000406766 | 228 |
| 119 | 3300014497 | Ga0182008_10024426 | Ga0182008_100244264 | 228 |
| 120 | 3300015262 | Ga0182007_10010844 | Ga0182007_100108445 | 228 |
| 121 | 3300020080 | Ga0206350_11609373 | Ga0206350_116093731 | 228 |
| 122 | 3300025949 | Ga0207667_10102461 | Ga0207667_101024613 | 228 |
| 123 | 3300037471 | Ga0395905_0000242 | Ga0395905_0000242_20356_21045 | 228 |
| 124 | 3300042121 | Ga0450919_000233 | Ga0450919_000233_1079_1765 | 228 |
| 125 | 3300042531 | Ga0450918_000062 | Ga0450918_000062_4164_4850 | 228 |
| 126 | 3300046460 | Ga0495638_0004808 | Ga0495638_0004808_3283_4005 | 228 |
| 127 | 3300046519 | Ga0495632_0118491 | Ga0495632_0118491_152_847 | 228 |
| 128 | 3300046522 | Ga0495643_0003926 | Ga0495643_0003926_325_1020 | 228 |
| 129 | 3300046694 | Ga0495649_0078887 | Ga0495649_0078887_918_1613 | 228 |
| 130 | 3300047445 | Ga0495677_0000170 | Ga0495677_0000170_19719_20408 | 228 |
| 131 | 3300047445 | Ga0495677_0005180 | Ga0495677_0005180_3841_4536 | 228 |
| 132 | 3300048091 | Ga0495626_0065199 | Ga0495626_0065199_537_1232 | 228 |
| 133 | 3300048913 | Ga0496110_0000519 | Ga0496110_0000519_3499_4194 | 228 |
| 134 | 3300048914 | Ga0496111_0164083 | Ga0496111_0164083_549_1244 | 228 |
| 135 | 3300048926 | Ga0496123_0022254 | Ga0496123_0022254_3482_4204 | 228 |
| 136 | 3300049572 | Ga0501036_0771574 | Ga0501036_0771574_37_759 | 229 |
| 137 | 3300049573 | Ga0501037_0140421 | Ga0501037_0140421_232_954 | 229 |
| 138 | 3300049574 | Ga0501038_0095256 | Ga0501038_0095256_827_1549 | 229 |
| 139 | 3300049576 | Ga0501040_0038514 | Ga0501040_0038514_1594_2316 | 229 |
| 140 | 3300049577 | Ga0501041_0021717 | Ga0501041_0021717_1808_2530 | 229 |
| 141 | 3300049579 | Ga0501043_0360245 | Ga0501043_0360245_12_734 | 229 |
| 142 | 3300049580 | Ga0501046_0039970 | Ga0501046_0039970_2516_3238 | 229 |
| 143 | 3300049582 | Ga0501048_0104477 | Ga0501048_0104477_1085_1807 | 229 |
| 144 | 3300049586 | Ga0501070_0713624 | Ga0501070_0713624_41_763 | 229 |
| 145 | 3300049587 | Ga0501071_0039724 | Ga0501071_0039724_227_949 | 229 |
| 146 | 3300049588 | Ga0501072_0356839 | Ga0501072_0356839_69_791 | 229 |
| 147 | 3300049591 | Ga0501075_0037095 | Ga0501075_0037095_2406_3128 | 229 |
| 148 | 3300049592 | Ga0501076_0017382 | Ga0501076_0017382_1986_2708 | 229 |
| 149 | 3300049593 | Ga0501077_0524915 | Ga0501077_0524915_27_749 | 229 |
| 150 | 3300049742 | Ga0501080_0008804 | Ga0501080_0008804_404_1126 | 229 |
| 151 | 3300049743 | Ga0501081_0109631 | Ga0501081_0109631_724_1446 | 229 |
| 152 | 3300049822 | Ga0501035_0680079 | Ga0501035_0680079_78_800 | 229 |
| 153 | 3300054114 | Ga0501084_0309410 | Ga0501084_0309410_227_949 | 229 |
| 154 | 3300060353 | Ga0501082_0032220 | Ga0501082_0032220_16_738 | 229 |
| 155 | 3300061734 | Ga0530510_0031070 | Ga0530510_0031070_1230_1952 | 229 |
| 156 | iso_pu_bacteria | 2585428060 | 2587748374 | 229 |
| 157 | iso_pu_bacteria | 2585428060 | 2587748502 | 229 |
| 158 | iso_pu_bacteria | 2588253712 | 2588446184 | 229 |
| 159 | 3300003316 | rootH1_10073884 | rootH1_100738843 | 232 |
| 160 | 3300021361 | Ga0213872_10035388 | Ga0213872_100353882 | 237 |
| 161 | 3300031824 | Ga0307413_10100640 | Ga0307413_101006401 | 239 |
| 162 | 3300031852 | Ga0307410_10170152 | Ga0307410_101701522 | 239 |
| 163 | 3300031901 | Ga0307406_10132212 | Ga0307406_101322121 | 239 |
| 164 | 3300031911 | Ga0307412_10420571 | Ga0307412_104205712 | 239 |
| 165 | 3300031995 | Ga0307409_100614649 | Ga0307409_1006146492 | 239 |
| 166 | 3300032005 | Ga0307411_10229148 | Ga0307411_102291481 | 239 |
| 167 | 3300049668 | Ga0501233_011288 | Ga0501233_011288_786_1508 | 239 |
| 168 | 3300049769 | Ga0501272_020227 | Ga0501272_020227_14_736 | 239 |
| 169 | 3300053158 | Ga0500627_0055528 | Ga0500627_0055528_909_1670 | 239 |
| 170 | 3300053730 | Ga0500645_071722 | Ga0500645_071722_137_898 | 239 |
| 171 | iso_pu_bacteria | 2842509118 | 2842510672 | 239 |
| 172 | 3300047317 | Ga0495604_0091551 | Ga0495604_0091551_1184_1912 | 240 |
| 173 | 3300047471 | Ga0495684_0175704 | Ga0495684_0175704_94_822 | 240 |
| 174 | 3300049761 | Ga0501264_000268 | Ga0501264_000268_6714_7568 | 249 |
| 175 | 3300047472 | Ga0495686_0001186 | Ga0495686_0001186_8514_9293 | 250 |
| 176 | 3300031548 | Ga0307408_100165398 | Ga0307408_1001653982 | 251 |
| 177 | 3300049670 | Ga0501236_014242 | Ga0501236_014242_235_1020 | 251 |
| 178 | 3300049686 | Ga0501257_003187 | Ga0501257_003187_1256_2041 | 251 |
| 179 | 3300046809 | Ga0495600_0022884 | Ga0495600_0022884_2006_2782 | 253 |
| 180 | 3300003322 | rootL2_10053297 | rootL2_100532978 | 255 |
| 181 | 3300049677 | Ga0501247_011431 | Ga0501247_011431_95_886 | 262 |
| 182 | 3300039447 | Ga0436361_0494143 | Ga0436361_0494143_11534_12397 | 263 |
| 183 | 3300003316 | rootH1_10033260 | rootH1_1003326019 | 264 |
| 184 | 3300003320 | rootH2_10180610 | rootH2_101806101 | 264 |
| 185 | 3300003323 | rootH1_10054477 | rootH1_1005447716 | 264 |
| 186 | 3300006358 | Ga0068871_100343613 | Ga0068871_1003436131 | 264 |
| 187 | 3300006931 | Ga0097620_100273726 | Ga0097620_1002737262 | 264 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 4p5p-assembly1.cif.gz_A | x-ray structure of francisella tularensis rapid encystment protein 24 kda (rep24), gene product of ftn_0841 | 0.9622 | 37 | 260 |
| 4p5p-assembly1.cif.gz_A | x-ray structure of francisella tularensis rapid encystment protein 24 kda (rep24), gene product of ftn_0841 | 0.9456 | 37 | 260 |
| 1u9c-assembly1.cif.gz_A | crystallographic structure of apc35852 | 0.9338 | 36 | 264 |
| 4qyx-assembly1.cif.gz_A | crystal structure of ydr533cp | 0.9316 | 38 | 260 |
| 1u9c-assembly1.cif.gz_A | crystallographic structure of apc35852 | 0.9257 | 36 | 264 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_Q54W12_1_221_3.40.50.880 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Class I glutamine amidotransferase (GATase) domain | 0.9673 | 37 | 258 | 3.40.50.880 |
| 4p5pA00 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Class I glutamine amidotransferase (GATase) domain | 0.9619 | 37 | 260 | 3.40.50.880 |
| af_Q54W12_1_221_3.40.50.880 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Class I glutamine amidotransferase (GATase) domain | 0.9588 | 37 | 258 | 3.40.50.880 |
| 4p5pA00 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Class I glutamine amidotransferase (GATase) domain | 0.9453 | 37 | 260 | 3.40.50.880 |
| af_Q04902_1_237_3.40.50.880 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Class I glutamine amidotransferase (GATase) domain | 0.9344 | 37 | 261 | 3.40.50.880 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A349P5K1-F1-model_v4 | deleted | 1.004 | 131 | 260 |
|
| AF-A0A530C1L7-F1-model_v4 | Type 1 glutamine amidotransferase domain-containing protein | 1.003 | 183 | 262 |
GO:0016740
|
| AF-S9QIH0-F1-model_v4 | ThiJ/PfpI family protein | 1.002 | 186 | 264 |
|
| AF-A0A355QWN9-F1-model_v4 | deleted | 1.001 | 138 | 263 |
|
| AF-W4RWS6-F1-model_v4 | ThiJ/PfpI family protein | 1.001 | 143 | 261 |
GO:0005737
GO:0019172 GO:0019243 |
Predicted Structure (AlphaFold2)
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