F288227

General Info

Members Datasets Scaffolds Average Seq Length
187 116 174 569

Family's Representative Sequence

Representative Sequence 3300046665|Ga0495661_0056596|Ga0495661_0056596_190_2031
Length 605
Sequence MLNKTPMLFGTRDEKKFCITCTNTRYNQRVWRTSLLSIVQNGGAFLLASFLIFLASTGTYAQGPKGPTSNQPYPQNYFRYPLDLPPSTAGSFGELRPSHFHSGLDFKTNQRTGYPVHAVFDGYVSRLRIQFGGFGQALYITHPNGYTSVYGHIASFTPEVAKYIRDYQYKNQTFEADIPVPAGLFHVCKDDVVAVSGNEGASAGPHLHFEIRDTLTEETINPQLFGLTIPDKIPPTITSIGIYNLNGNPFSEKTPRKFLAITGAAGHYRLLKPQVLNLTGNIGFGIGVTDMNSSSMNRNGIYSLELKLDGRIVYSFAVERFAFDQTHAINAYIDYPAFLTSRRWMQKCFILPGSRIPLYPQSINHGIIAFNDNAEHEVEYVVKDVAGNTSSLTVKVKSSPSNITPDKPAGTLFHFDQKSEFSNDKVKVTIVPGNLYDDLDFIYSAQPAKPGAFSLTHRIHNRLTPIHDGYDLWIKPDINLGAYADKAIIINAASGSIGGLYENGYVKAVAHSFGDYYIKIDTVPPVIKPLNITNGSNMRVSKSLSGVKSYTGKIDGKWVLMEWRYKTKILSYTFNNDIAPGKHNFELVVVDGKNNTSTYTAEFNR

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
3 2738541283 Pedobacter sp. OK701 Isolate Unclassified
4 2738541284 Pedobacter sp. YR016 Isolate Unclassified
5 2738543023 Pedobacter sp. OK628 Isolate Unclassified
6 2852623160 Mucilaginibacter sp. AK015 Isolate Rhizosphere
7 2852627209 Pedobacter sp. AK017 Isolate Rhizosphere
8 2884933994 Mucilaginibacter sp. 14171R-50 Isolate Rhizosphere
9 2919186247 Pedobacter africanus 2697 Isolate Rhizosphere
10 2919437846 Mucilaginibacter pocheonensis 3262 Isolate Rhizosphere
11 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
12 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
13 2932082852 Mucilaginibacter sp. 3215 Isolate Rhizosphere
14 2939664404 Pedobacter africanus 2990 Isolate Rhizosphere
15 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
16 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
17 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
18 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
19 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
20 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
21 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
22 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
23 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
24 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
25 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
26 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
27 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
28 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
29 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
30 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
31 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
32 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
33 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
34 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
35 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
36 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
37 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
38 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
39 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
40 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
41 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
42 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
43 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
44 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
45 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
46 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
47 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
48 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
49 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
50 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
51 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
52 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
53 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
54 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
55 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
56 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
57 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
58 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
59 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
60 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
61 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
80 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
81 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
82 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
83 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
84 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
85 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
86 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
87 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
88 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
89 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
90 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
91 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
92 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
93 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
94 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
95 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
96 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
97 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
98 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
99 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
100 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
101 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
102 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
103 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
104 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
105 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
106 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
107 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
108 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
109 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
110 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
111 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
112 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
113 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
114 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
115 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
116 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 93.05
Metatranscriptomes 0
Isolates 6.95

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 10.16
Nodule 0
Rhizoplane 0.53
Rhizosphere 81.28
Stem 0
Stem Tuber 0
Unclassified 8.02

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_2739513 2162886007 Bacteria 11488
2 JGI24737J22298_10000071 3300001990 Bacteria 29829
3 JGI24737J22298_10004777 3300001990 Bacteria 4705
4 JGI24735J21928_10000013 3300002067 Bacteria 208663
5 JGI25162J39368_1000107 3300002737 Bacteria 90782
6 JGI25162J39368_1000615 3300002737 Bacteria 25611
7 JGI25164J39214_1001377 3300002772 Bacteria 5829
8 JGI25165J46597_1000157 3300003214 Bacteria 108987
9 rootH2_10005336 3300003320 Bacteria 90063
10 rootH2_10025125 3300003320 Bacteria 4206
11 rootH2_10071606 3300003320 Bacteria 5560
12 rootH1_10027348 3300003323 Bacteria 4194
13 rootH1_10076895 3300003323 Bacteria 5837
14 Ga0065714_10002412 3300005288 Bacteria 18872
15 Ga0065714_10002827 3300005288 Bacteria 10778
16 Ga0065714_10003725 3300005288 Bacteria 8045
17 Ga0065714_10065215 3300005288 Bacteria 11814
18 Ga0065714_10074264 3300005288 Bacteria 3062
19 Ga0065704_10071014 3300005289 Bacteria 13752
20 Ga0070658_10000014 3300005327 Bacteria 244978
21 Ga0070676_10000729 3300005328 Bacteria 16102
22 Ga0070673_100001650 3300005364 Bacteria 13228
23 Ga0070662_100000014 3300005457 Bacteria 110124
24 Ga0070681_10003892 3300005458 Bacteria 14063
25 Ga0068867_100001403 3300005459 Bacteria 16639
26 Ga0068853_100003643 3300005539 Bacteria 11812
27 Ga0068853_100015859 3300005539 Bacteria 6189
28 Ga0070672_100016971 3300005543 Bacteria 5227
29 Ga0070665_100000032 3300005548 Bacteria 333352
30 Ga0068855_100000049 3300005563 Bacteria 145321
31 Ga0068855_100000458 3300005563 Bacteria 50148
32 Ga0068855_100097119 3300005563 Bacteria 3393
33 Ga0068857_100067266 3300005577 Bacteria 3189
34 Ga0068856_100000191 3300005614 Bacteria 64613
35 Ga0068856_100003417 3300005614 Bacteria 16061
36 Ga0068856_100086532 3300005614 Bacteria 3114
37 Ga0068852_100045319 3300005616 Bacteria 3740
38 Ga0075366_10002239 3300006195 Bacteria 9880
39 Ga0075366_10010332 3300006195 Bacteria 5240
40 Ga0097621_100003150 3300006237 Bacteria 11325
41 Ga0068871_100000306 3300006358 Bacteria 34178
42 Ga0068865_100000271 3300006881 Bacteria 28407
43 Ga0105240_10000010 3300009093 Bacteria 537830
44 Ga0105240_10073975 3300009093 Bacteria 4207
45 Ga0105241_10037743 3300009174 Bacteria 3639
46 Ga0105237_10000578 3300009545 Bacteria 51257
47 Ga0105237_10000844 3300009545 Bacteria 41756
48 Ga0105237_10001048 3300009545 Bacteria 37140
49 Ga0105237_10001711 3300009545 Bacteria 28390
50 Ga0105237_10008085 3300009545 Bacteria 11437
51 Ga0105237_10008956 3300009545 Bacteria 10774
52 Ga0105237_10047397 3300009545 Bacteria 4320
53 Ga0105238_10044762 3300009551 Bacteria 4473
54 Ga0105239_10000007 3300010375 Bacteria 385297
55 Ga0105239_10000212 3300010375 Bacteria 85747
56 Ga0105239_10000352 3300010375 Bacteria 67522
57 Ga0105239_10005942 3300010375 Bacteria 14203
58 Ga0105239_10011856 3300010375 Bacteria 9725
59 Ga0105239_10060019 3300010375 Bacteria 4173
60 Ga0105239_10115215 3300010375 Bacteria 2982
61 Ga0157373_10000031 3300013100 Bacteria 126446
62 Ga0157373_10000881 3300013100 Bacteria 23243
63 Ga0157373_10007395 3300013100 Bacteria 8173
64 Ga0157371_10000689 3300013102 Bacteria 39887
65 Ga0157371_10001485 3300013102 Bacteria 24261
66 Ga0157371_10002152 3300013102 Bacteria 19201
67 Ga0157371_10013541 3300013102 Bacteria 6191
68 Ga0157371_10044143 3300013102 Bacteria 3174
69 Ga0157370_10000197 3300013104 Bacteria 75846
70 Ga0157370_10008599 3300013104 Bacteria 10993
71 Ga0157370_10074367 3300013104 Bacteria 3205
72 Ga0157369_10114921 3300013105 Bacteria 2858
73 Ga0157374_10001060 3300013296 Bacteria 23873
74 Ga0157374_10002738 3300013296 Bacteria 14800
75 Ga0163162_10011830 3300013306 Bacteria 8513
76 Ga0163162_10024006 3300013306 Bacteria 6018
77 Ga0157372_10000173 3300013307 Bacteria 71416
78 Ga0157372_10002719 3300013307 Bacteria 19140
79 Ga0157372_10009261 3300013307 Bacteria 10472
80 Ga0157372_10010028 3300013307 Bacteria 10074
81 Ga0157375_10039278 3300013308 Bacteria 4554
82 Ga0157375_10050446 3300013308 Bacteria 4082
83 Ga0182008_10000024 3300014497 Bacteria 199978
84 Ga0182008_10001883 3300014497 Bacteria 13641
85 Ga0182006_1000373 3300015261 Bacteria 37119
86 Ga0163161_10001209 3300017792 Bacteria 19448
87 Ga0207427_100025 3300025231 Bacteria 433726
88 Ga0209437_100010 3300025233 Bacteria 838447
89 Ga0209437_100148 3300025233 Bacteria 158795
90 Ga0209233_1000017 3300025261 Bacteria 898076
91 Ga0209233_1001980 3300025261 Bacteria 7776
92 Ga0209455_1002984 3300025272 Bacteria 6221
93 Ga0207647_10000366 3300025904 Bacteria 36781
94 Ga0207647_10000680 3300025904 Bacteria 26722
95 Ga0207645_10000591 3300025907 Bacteria 30054
96 Ga0207705_10000107 3300025909 Bacteria 94984
97 Ga0207707_10003005 3300025912 Bacteria 14994
98 Ga0207695_10000019 3300025913 Bacteria 732137
99 Ga0207695_10036696 3300025913 Bacteria 5295
100 Ga0207671_10002404 3300025914 Bacteria 20077
101 Ga0207671_10002702 3300025914 Bacteria 18606
102 Ga0207671_10003730 3300025914 Bacteria 15012
103 Ga0207671_10014749 3300025914 Bacteria 6161
104 Ga0207671_10033798 3300025914 Bacteria 3804
105 Ga0207694_10102666 3300025924 Bacteria 2267
106 Ga0207706_10000057 3300025933 Bacteria 112805
107 Ga0207704_10001974 3300025938 Bacteria 9198
108 Ga0207661_10004099 3300025944 Bacteria 10186
109 Ga0207667_10000015 3300025949 Bacteria 417534
110 Ga0207667_10002856 3300025949 Bacteria 21432
111 Ga0207651_10001477 3300025960 Bacteria 10705
112 Ga0207639_10103403 3300026041 Bacteria 2308
113 Ga0207702_10003768 3300026078 Bacteria 13697
114 Ga0207702_10007581 3300026078 Bacteria 9240
115 Ga0207702_10064488 3300026078 Bacteria 3135
116 Ga0207648_10005635 3300026089 Bacteria 12581
117 Ga0207674_10066526 3300026116 Bacteria 3630
118 Ga0207698_10050866 3300026142 Bacteria 3164
119 Ga0268266_10000030 3300028379 Bacteria 417120
120 Ga0307517_10001373 3300028786 Bacteria 40930
121 Ga0307515_10001837 3300028794 Bacteria 47323
122 Ga0307408_100000919 3300031548 Bacteria 22963
123 Ga0307408_100001075 3300031548 Bacteria 20928
124 Ga0307408_100006564 3300031548 Bacteria 7712
125 Ga0307412_10000030 3300031911 Bacteria 208541
126 Ga0307414_10010616 3300032004 Bacteria 5355
127 Ga0307414_10063964 3300032004 Bacteria 2617
128 Ga0307507_10000032 3300033179 Bacteria 194155
129 Ga0395899_0000002 3300037312 Bacteria 1324310
130 Ga0395900_0000284 3300037418 Bacteria 75852
131 Ga0395900_0039515 3300037418 Bacteria 4862
132 Ga0395898_0192070 3300037466 Unclassified 1951
133 Ga0395905_0002359 3300037471 Bacteria 21041
134 Ga0395901_0077638 3300038443 Bacteria 3466
135 Ga0395901_0155001 3300038443 Bacteria 2406
136 Ga0439448_0001170 3300042005 Bacteria 6661
137 Ga0495651_0037266 3300046462 Bacteria 3786
138 Ga0495650_0000162 3300046471 Bacteria 148927
139 Ga0495585_0000153 3300046492 Bacteria 74267
140 Ga0495585_0000240 3300046492 Bacteria 56802
141 Ga0495606_0000033 3300046507 Bacteria 247739
142 Ga0495606_0030822 3300046507 Bacteria 3740
143 Ga0495606_0036119 3300046507 Bacteria 3370
144 Ga0495610_0013903 3300046512 Bacteria 4755
145 Ga0495616_0013970 3300046513 Bacteria 4511
146 Ga0495616_0021699 3300046513 Bacteria 3473
147 Ga0495644_0014739 3300046523 Unclassified 2993
148 Ga0495609_0006455 3300046538 Bacteria 5981
149 Ga0495633_0011234 3300046558 Bacteria 4840
150 Ga0495668_0000009 3300046616 Bacteria 492623
151 Ga0495625_0000131 3300046660 Bacteria 117738
152 Ga0495625_0000951 3300046660 Bacteria 38714
153 Ga0495625_0014454 3300046660 Bacteria 6299
154 Ga0495625_0040168 3300046660 Bacteria 3415
155 Ga0495625_0074161 3300046660 Bacteria 2384
156 Ga0495661_0000134 3300046665 Bacteria 87487
157 Ga0495661_0003857 3300046665 Bacteria 10954
158 Ga0495661_0056596 3300046665 Bacteria 2345
159 Ga0495649_0000009 3300046694 Bacteria 451725
160 Ga0495683_0023267 3300047323 Unclassified 3185
161 Ga0495687_003112 3300047443 Bacteria 12401
162 Ga0495686_0000843 3300047472 Bacteria 39372
163 Ga0495686_0039567 3300047472 Bacteria 3011
164 Ga0496122_0003056 3300048925 Bacteria 22633
165 Ga0496123_0018184 3300048926 Bacteria 5606
166 Ga0495678_009913 3300049459 Bacteria 4670
167 Ga0501223_000668 3300049663 Bacteria 8215
168 nmdc:mga0k408_320_c1 3300050493 Bacteria 26097
169 nmdc:mga0k408_3699_c1 3300050493 Bacteria 8102
170 Ga0500651_0000462 3300053093 Bacteria 21501
171 Ga0500608_004337 3300053122 Bacteria 5474
172 Ga0500618_000029 3300053125 Bacteria 131691
173 Ga0500622_0017031 3300053156 Bacteria 3874
174 Ga0500624_000118 3300053157 Bacteria 35980

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300009174 Ga0105241_10037743 Ga0105241_100377432 521
2 3300046538 Ga0495609_0006455 Ga0495609_0006455_1876_3468 530
3 3300005364 Ga0070673_100001650 Ga0070673_1000016507 550
4 3300005539 Ga0068853_100003643 Ga0068853_10000364310 550
5 3300005543 Ga0070672_100016971 Ga0070672_1000169712 550
6 3300005563 Ga0068855_100097119 Ga0068855_1000971192 550
7 3300006237 Ga0097621_100003150 Ga0097621_1000031504 550
8 3300006358 Ga0068871_100000306 Ga0068871_10000030617 550
9 3300009545 Ga0105237_10001711 Ga0105237_100017113 550
10 3300013296 Ga0157374_10001060 Ga0157374_1000106014 550
11 3300025924 Ga0207694_10102666 Ga0207694_101026662 550
12 3300025960 Ga0207651_10001477 Ga0207651_100014777 550
13 3300026041 Ga0207639_10103403 Ga0207639_101034032 550
14 3300031548 Ga0307408_100000919 Ga0307408_10000091916 551
15 3300005328 Ga0070676_10000729 Ga0070676_100007293 554
16 3300005459 Ga0068867_100001403 Ga0068867_1000014036 554
17 3300005616 Ga0068852_100045319 Ga0068852_1000453194 554
18 3300006881 Ga0068865_100000271 Ga0068865_1000002714 554
19 3300010375 Ga0105239_10011856 Ga0105239_100118567 554
20 3300010375 Ga0105239_10060019 Ga0105239_100600194 554
21 3300025907 Ga0207645_10000591 Ga0207645_1000059114 554
22 3300025938 Ga0207704_10001974 Ga0207704_100019744 554
23 3300026089 Ga0207648_10005635 Ga0207648_100056356 554
24 3300026142 Ga0207698_10050866 Ga0207698_100508662 554
25 3300046513 Ga0495616_0021699 Ga0495616_0021699_1109_2827 554
26 3300046660 Ga0495625_0074161 Ga0495625_0074161_422_2140 554
27 3300049459 Ga0495678_009913 Ga0495678_009913_2858_4576 554
28 3300005327 Ga0070658_10000014 Ga0070658_10000014161 555
29 3300025909 Ga0207705_10000107 Ga0207705_1000010718 555
30 3300005539 Ga0068853_100015859 Ga0068853_1000158593 558
31 3300009545 Ga0105237_10001048 Ga0105237_1000104836 558
32 3300009551 Ga0105238_10044762 Ga0105238_100447624 558
33 3300010375 Ga0105239_10000007 Ga0105239_10000007170 558
34 3300025914 Ga0207671_10003730 Ga0207671_100037308 558
35 3300046665 Ga0495661_0000134 Ga0495661_0000134_55391_57079 559
36 3300053156 Ga0500622_0017031 Ga0500622_0017031_2081_3793 559
37 3300046665 Ga0495661_0056596 Ga0495661_0056596_190_2031 561
38 3300031548 Ga0307408_100006564 Ga0307408_1000065643 563
39 iso_pu_bacteria 2919437846 2919438276 564
40 3300013307 Ga0157372_10009261 Ga0157372_100092616 565
41 3300037418 Ga0395900_0039515 Ga0395900_0039515_1096_2817 565
42 3300037466 Ga0395898_0192070 Ga0395898_0192070_15_1736 565
43 3300037471 Ga0395905_0002359 Ga0395905_0002359_12091_13812 565
44 3300038443 Ga0395901_0077638 Ga0395901_0077638_487_2208 565
45 3300001990 JGI24737J22298_10004777 JGI24737J22298_100047774 567
46 3300013100 Ga0157373_10000881 Ga0157373_1000088116 567
47 3300013102 Ga0157371_10001485 Ga0157371_1000148518 567
48 3300013104 Ga0157370_10008599 Ga0157370_100085997 567
49 3300013307 Ga0157372_10000173 Ga0157372_1000017343 567
50 3300031548 Ga0307408_100001075 Ga0307408_10000107510 567
51 3300046507 Ga0495606_0030822 Ga0495606_0030822_320_2035 567
52 iso_pu_bacteria 2599185184 2599480420 567
53 iso_pu_bacteria 2928078545 2928083339 567
54 iso_pu_bacteria 2928147474 2928151399 567
55 iso_pu_bacteria 2932082852 2932087318 567
56 3300005577 Ga0068857_100067266 Ga0068857_1000672662 568
57 3300009545 Ga0105237_10008956 Ga0105237_1000895610 568
58 3300010375 Ga0105239_10000352 Ga0105239_1000035242 568
59 3300013105 Ga0157369_10114921 Ga0157369_101149212 568
60 3300025261 Ga0209233_1001980 Ga0209233_10019807 568
61 3300025904 Ga0207647_10000366 Ga0207647_1000036614 568
62 3300025914 Ga0207671_10014749 Ga0207671_100147496 568
63 3300026116 Ga0207674_10066526 Ga0207674_100665264 568
64 3300038443 Ga0395901_0155001 Ga0395901_0155001_633_2342 568
65 3300047472 Ga0495686_0000843 Ga0495686_0000843_1953_3671 568
66 3300002737 JGI25162J39368_1000107 JGI25162J39368_100010742 569
67 3300005614 Ga0068856_100000191 Ga0068856_1000001919 569
68 3300009545 Ga0105237_10008085 Ga0105237_100080858 569
69 3300010375 Ga0105239_10000212 Ga0105239_1000021245 569
70 3300013100 Ga0157373_10000031 Ga0157373_1000003153 569
71 3300013307 Ga0157372_10010028 Ga0157372_100100285 569
72 3300025233 Ga0209437_100148 Ga0209437_100148101 569
73 3300025914 Ga0207671_10002702 Ga0207671_1000270215 569
74 3300025944 Ga0207661_10004099 Ga0207661_100040997 569
75 3300026078 Ga0207702_10003768 Ga0207702_100037687 569
76 3300032004 Ga0307414_10063964 Ga0307414_100639642 569
77 3300033179 Ga0307507_10000032 Ga0307507_10000032111 569
78 3300046507 Ga0495606_0036119 Ga0495606_0036119_65_1780 569
79 3300053125 Ga0500618_000029 Ga0500618_000029_13139_14854 569
80 3300053157 Ga0500624_000118 Ga0500624_000118_32062_33780 569
81 iso_pu_bacteria 2738541283 2738755429 569
82 iso_pu_bacteria 2738541284 2738763515 569
83 iso_pu_bacteria 2738543023 2739303262 569
84 iso_pu_bacteria 2852627209 2852629373 569
85 iso_pu_bacteria 2919186247 2919190285 569
86 iso_pu_bacteria 2939664404 2939668566 569
87 3300002737 JGI25162J39368_1000615 JGI25162J39368_10006157 570
88 3300002772 JGI25164J39214_1001377 JGI25164J39214_10013775 570
89 3300003214 JGI25165J46597_1000157 JGI25165J46597_100015736 570
90 3300003320 rootH2_10071606 rootH2_100716062 570
91 3300003323 rootH1_10027348 rootH1_100273483 570
92 3300003323 rootH1_10076895 rootH1_100768956 570
93 3300005288 Ga0065714_10003725 Ga0065714_100037258 570
94 3300005563 Ga0068855_100000458 Ga0068855_10000045858 570
95 3300006195 Ga0075366_10010332 Ga0075366_100103323 570
96 3300025231 Ga0207427_100025 Ga0207427_100025106 570
97 3300025233 Ga0209437_100010 Ga0209437_100010368 570
98 3300025261 Ga0209233_1000017 Ga0209233_1000017381 570
99 3300025949 Ga0207667_10002856 Ga0207667_1000285617 570
100 3300028794 Ga0307515_10001837 Ga0307515_100018375 570
101 3300037312 Ga0395899_0000002 Ga0395899_0000002_531272_532987 570
102 3300037418 Ga0395900_0000284 Ga0395900_0000284_6262_7977 570
103 3300046492 Ga0495585_0000240 Ga0495585_0000240_9512_11233 570
104 3300046616 Ga0495668_0000009 Ga0495668_0000009_203652_205373 570
105 3300046660 Ga0495625_0000951 Ga0495625_0000951_3060_4781 570
106 3300046660 Ga0495625_0014454 Ga0495625_0014454_509_2230 570
107 3300046660 Ga0495625_0040168 Ga0495625_0040168_1596_3317 570
108 3300049663 Ga0501223_000668 Ga0501223_000668_1880_3607 570
109 3300050493 nmdc:mga0k408_320_c1 nmdc:mga0k408_320_c1_1647_3368 570
110 3300050493 nmdc:mga0k408_3699_c1 nmdc:mga0k408_3699_c1_4767_6479 570
111 3300001990 JGI24737J22298_10000071 JGI24737J22298_1000007113 571
112 3300002067 JGI24735J21928_10000013 JGI24735J21928_10000013161 571
113 3300003320 rootH2_10005336 rootH2_1000533675 571
114 3300003320 rootH2_10025125 rootH2_100251254 571
115 3300005288 Ga0065714_10074264 Ga0065714_100742643 571
116 3300005457 Ga0070662_100000014 Ga0070662_10000001463 571
117 3300005458 Ga0070681_10003892 Ga0070681_100038927 571
118 3300005548 Ga0070665_100000032 Ga0070665_100000032188 571
119 3300005563 Ga0068855_100000049 Ga0068855_10000004955 571
120 3300005614 Ga0068856_100003417 Ga0068856_10000341711 571
121 3300005614 Ga0068856_100086532 Ga0068856_1000865322 571
122 3300006195 Ga0075366_10002239 Ga0075366_100022396 571
123 3300009093 Ga0105240_10000010 Ga0105240_1000001060 571
124 3300009093 Ga0105240_10073975 Ga0105240_100739752 571
125 3300009545 Ga0105237_10000844 Ga0105237_1000084436 571
126 3300009545 Ga0105237_10047397 Ga0105237_100473975 571
127 3300010375 Ga0105239_10005942 Ga0105239_100059427 571
128 3300010375 Ga0105239_10115215 Ga0105239_101152152 571
129 3300013100 Ga0157373_10007395 Ga0157373_1000739510 571
130 3300013102 Ga0157371_10013541 Ga0157371_100135414 571
131 3300013102 Ga0157371_10044143 Ga0157371_100441433 571
132 3300013296 Ga0157374_10002738 Ga0157374_100027385 571
133 3300013306 Ga0163162_10011830 Ga0163162_100118304 571
134 3300013306 Ga0163162_10024006 Ga0163162_100240064 571
135 3300013307 Ga0157372_10002719 Ga0157372_1000271917 571
136 3300013308 Ga0157375_10039278 Ga0157375_100392784 571
137 3300013308 Ga0157375_10050446 Ga0157375_100504463 571
138 3300025272 Ga0209455_1002984 Ga0209455_10029846 571
139 3300025904 Ga0207647_10000680 Ga0207647_1000068024 571
140 3300025912 Ga0207707_10003005 Ga0207707_100030057 571
141 3300025913 Ga0207695_10000019 Ga0207695_10000019391 571
142 3300025913 Ga0207695_10036696 Ga0207695_100366964 571
143 3300025914 Ga0207671_10033798 Ga0207671_100337985 571
144 3300025933 Ga0207706_10000057 Ga0207706_1000005773 571
145 3300025949 Ga0207667_10000015 Ga0207667_10000015305 571
146 3300026078 Ga0207702_10007581 Ga0207702_1000758111 571
147 3300026078 Ga0207702_10064488 Ga0207702_100644882 571
148 3300028379 Ga0268266_10000030 Ga0268266_10000030142 571
149 3300028786 Ga0307517_10001373 Ga0307517_1000137326 571
150 3300042005 Ga0439448_0001170 Ga0439448_0001170_2778_4496 571
151 3300046462 Ga0495651_0037266 Ga0495651_0037266_307_2025 571
152 3300046471 Ga0495650_0000162 Ga0495650_0000162_93847_95568 571
153 3300046492 Ga0495585_0000153 Ga0495585_0000153_68583_70301 571
154 3300046507 Ga0495606_0000033 Ga0495606_0000033_207370_209088 571
155 3300046512 Ga0495610_0013903 Ga0495610_0013903_1532_3250 571
156 3300046513 Ga0495616_0013970 Ga0495616_0013970_805_2526 571
157 3300046523 Ga0495644_0014739 Ga0495644_0014739_181_1899 571
158 3300046558 Ga0495633_0011234 Ga0495633_0011234_362_2080 571
159 3300046660 Ga0495625_0000131 Ga0495625_0000131_85051_86772 571
160 3300046665 Ga0495661_0003857 Ga0495661_0003857_1067_2788 571
161 3300046694 Ga0495649_0000009 Ga0495649_0000009_85041_86762 571
162 3300047323 Ga0495683_0023267 Ga0495683_0023267_109_1827 571
163 3300047443 Ga0495687_003112 Ga0495687_003112_3471_5189 571
164 3300047472 Ga0495686_0039567 Ga0495686_0039567_64_1782 571
165 3300053122 Ga0500608_004337 Ga0500608_004337_2470_4188 571
166 iso_pu_bacteria 2852623160 2852626773 571
167 iso_pu_bacteria 2884933994 2884933998 571
168 2162886007 SwRhRL2b_contig_2739513 SwRhRL2b_0315.00008120 573
169 3300005288 Ga0065714_10002412 Ga0065714_100024126 573
170 3300005288 Ga0065714_10002827 Ga0065714_100028277 573
171 3300005288 Ga0065714_10065215 Ga0065714_100652154 573
172 3300005289 Ga0065704_10071014 Ga0065704_100710144 573
173 3300009545 Ga0105237_10000578 Ga0105237_1000057832 573
174 3300013102 Ga0157371_10000689 Ga0157371_1000068913 573
175 3300013102 Ga0157371_10002152 Ga0157371_100021529 573
176 3300013104 Ga0157370_10000197 Ga0157370_1000019766 573
177 3300013104 Ga0157370_10074367 Ga0157370_100743673 573
178 3300014497 Ga0182008_10000024 Ga0182008_1000002436 573
179 3300014497 Ga0182008_10001883 Ga0182008_100018834 573
180 3300015261 Ga0182006_1000373 Ga0182006_100037319 573
181 3300017792 Ga0163161_10001209 Ga0163161_1000120915 573
182 3300025914 Ga0207671_10002404 Ga0207671_100024049 573
183 3300031911 Ga0307412_10000030 Ga0307412_10000030159 573
184 3300032004 Ga0307414_10010616 Ga0307414_100106163 573
185 3300048925 Ga0496122_0003056 Ga0496122_0003056_6847_8571 573
186 3300048926 Ga0496123_0018184 Ga0496123_0018184_2342_4066 573
187 3300053093 Ga0500651_0000462 Ga0500651_0000462_7738_9459 573

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01551

Peptidase_M23

Peptidase family M23

99

168

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
4qpb-assembly1.cif.gz_A catalytic domain of the antimicrobial peptidase lysostaphin from staphylococcus simulans crystallized in the absence of phosphate 0.818 41 182
3slu-assembly1.cif.gz_A crystal structure of nmb0315 0.8027 33 187
6smk-assembly1.cif.gz_A crystal structure of catalytic domain a109h mutant of prophage-encoded m23 protein enpa from enterococcus faecalis. 0.7946 36 184
2gu1-assembly1.cif.gz_A crystal structure of a zinc containing peptidase from vibrio cholerae 0.7844 33 187
7qrl-assembly2.cif.gz_B lytm domain of dipm, a coordinator of a complex net of autolysins in caulobacter crescentus 0.7725 12 181
ID Description Score Start End Superfamily
af_Q2FWU3_1169_1290_2.70.70.10 Mainly Beta;Distorted Sandwich;Glucose Permease (Domain IIA);Glucose Permease (Domain IIA) 0.8833 57 180 2.70.70.10
4zybC00 Mainly Beta;Distorted Sandwich;Glucose Permease (Domain IIA);Glucose Permease (Domain IIA) 0.8239 41 180 2.70.70.10
3sluA03 Mainly Beta;Distorted Sandwich;Glucose Permease (Domain IIA);Glucose Permease (Domain IIA) 0.8229 37 185 2.70.70.10
4qpbA00 Mainly Beta;Distorted Sandwich;Glucose Permease (Domain IIA);Glucose Permease (Domain IIA) 0.818 41 182 2.70.70.10
af_P0AFS9_286_413_2.70.70.10 Mainly Beta;Distorted Sandwich;Glucose Permease (Domain IIA);Glucose Permease (Domain IIA) 0.8051 35 185 2.70.70.10
ID Description Score Start End GO Terms
AF-A0A4Q3T5W2-F1-model_v4 deleted 0.9902 414 573
AF-A0A519VR99-F1-model_v4 M23 family metallopeptidase 0.9872 100 573
AF-R9GW06-F1-model_v4 Peptidase M23 domain-containing protein 0.9852 37 573 GO:0004222
AF-A0A519VR99-F1-model_v4 M23 family metallopeptidase 0.9851 100 573
AF-A0A1W9STL0-F1-model_v4 Peptidase M23 domain-containing protein 0.9843 74 158 GO:0004222

Feature Viewer

pLDDT pTM Quality
89.2 0.84 High
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Predicted Structure (AlphaFold2)

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