F288063

General Info

Members Datasets Scaffolds Average Seq Length
187 162 374 862

Family's Representative Sequence

Representative Sequence 3300041413|Ga0439465_0002167|Ga0439465_0002167_2903_6040
Length 1045
Sequence MLSVSVTQVKAIRRFTVRTVLPESIRPLARLATNLRWSWHRPTRELFEGLNPAIWDESAHDPVSFLGLVSREELQRLAADQDVVRRVQAAAEDLDRYLDQPRWYQGLGDDAPSCIAYFSPEFGITEVLPQYSGGLGILAGDHLKAASDLGVPLIGVGLLYQAGYFKQSLSRDAWQQETYPVLDPDGLPLTLLREDSPDGNGKPIQISLPLPHGRRLLAHIWRADVGRVPLLLLDSNVPGNDDAARGITDRLYGGGGDHRLQQELLLGMGGVKALRVYQRLTGCAAPEVFHTNEGHAGFLGIERIQELMSAERPLSWEEALAAGRASTVFTTHTPVPAGIDRFEVSQIQHFFEGGLAPDVPVSKILDLGRENFADGNPSVFNMAVMGLRLAQRANGVAKLHGVVSRGMFSALWPGFDHSEVPITSVTNGVHVPTWVDSRVSKLARDQFGAEAEAMGRWDLAYNVSDEDVWALRREMRVSLVEDVRKRLRAAWKKRGAADAELGWTDSVLDPDVLTIGFARRVPTYKRLTLMLREPARLKALLLHETHPIQLVIAGKSHPADDAGKKMIQDLVRFTDDPEVRHRIAFLPNYDIAMARTLFPGCDVWLNNPLRPLEACGTSGMKAAINGSLNLSVLDGWWDEMYDGENGWAIPTANNNASPEERDDIEAAALYELLETQVAPRFYGLTVSDAAGAAGPSESGTQKVPTHWVSMIKHTMAHLGPAVSAERMLQDYVNILYRPAAIAGRRAVADSFSQAIALAAWTSRIRASWPQIQVEHVDSVGVSEDPQIGDTLQVNAYIALHDLDPDDVAVEVAFGRAEESDELADVTVADLVPKEDLGKGRFLFSGSLLIDRSGSFGYTVRVLPKHSALASRAELGLIVNAYASWLCFRAPAGNAPSLRERCRLNGENCGSVRLEADCDHGQALAGVALRVLEDLADDPERAVRAEHRRDLPDEREGFLAVVRDRIREVVQRVIEGIEVHAVVFREIQYFPERVEHRLFCVGGGDHQDPAAGVGRLLAQLIDGPGVSGVDLHSCPYLLSTINRNDS

Samples

Sample ID Description Type Environment
1 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
2 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
5 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
6 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
7 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
8 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
9 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
10 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
11 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
12 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
13 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
14 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
15 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
16 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
17 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
18 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
19 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
20 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
21 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
22 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
23 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
24 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
25 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
26 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
27 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
28 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
29 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
30 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
31 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
32 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
33 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
34 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
35 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
36 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
37 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
38 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
39 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
40 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
41 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
42 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
43 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
44 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
45 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
46 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
47 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
48 3300041462 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_8 MetaG Metagenome Rhizoplane
49 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
50 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
51 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
52 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
53 3300042122 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926D_E14_082716_2496 Metagenome Rhizosphere
54 3300042146 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0714D_E14_080116_2979 Metagenome Rhizosphere
55 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
56 3300042531 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0117D_E14_082716_2253 Metagenome Rhizosphere
57 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
58 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
59 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
60 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
61 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
62 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
63 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
64 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
65 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
66 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
67 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
68 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
69 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
70 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
71 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
72 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
73 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
74 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
75 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
76 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
77 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
78 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
79 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
80 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
81 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
82 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
83 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
84 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
85 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
86 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
87 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
88 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
89 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
90 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
91 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
92 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
93 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
94 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
95 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
96 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
97 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
98 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
99 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
100 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
101 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
102 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
103 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
104 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
105 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
106 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
107 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
108 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
109 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
110 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
111 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
112 2537561592 Arthrobacter crystallopoietes BAB-32 Isolate Rhizosphere
113 2643221546 Microbacterium sp. Root53 Isolate Unclassified
114 2739367653 Kocuria sp. OV113 Isolate Unclassified
115 2808606357 Arthrobacter sp. SLBN-122 Isolate Unclassified
116 2808606360 Arthrobacter sp. SLBN-112 Isolate Unclassified
117 2808606366 Arthrobacter sp. SLBN-83 Isolate Unclassified
118 2808606371 Arthrobacter sp. SLBN-53 Isolate Unclassified
119 2811994871 Arthrobacter sp. SLBN-179 Isolate Unclassified
120 2816332305 Kocuria rhizophila FDAARGOS_302 Isolate Rhizosphere
121 2844849076 Arthrobacter cupressi DSM 24664 Isolate Rhizosphere
122 2844852863 Herbiconiux flava DSM 26474 Isolate Rhizosphere
123 2856741275 Microbispora triticiradicis NEAU-HRDPA2-9 Isolate Unclassified
124 2857727296 Kocuria sp. R-72562 Isolate Unclassified
125 2857729791 Plantibacter sp. R-72288 Isolate Unclassified
126 2857737099 Lysinimonas sp. R-73066 Isolate Unclassified
127 2857740372 Paenarthrobacter sp. R-74611 Isolate Unclassified
128 2870622029 Conyzicola lurida DSM 105784 Isolate Unclassified
129 2891395885 Microbispora catharanthi CR1-09 Isolate Unclassified
130 2891554331 Microbispora sp. CL1-1 Isolate Unclassified
131 2891562705 Microbispora tritici MT50 Isolate Unclassified
132 2893684298 Kocuria palustris DSM 11925 Isolate Rhizosphere
133 2904497146 Arthrobacter sp. 1276 Isolate Rhizosphere
134 2904776348 Paenarthrobacter sp. 1092 Isolate Rhizosphere
135 2905926851 Arthrobacter sedimenti MIC A30 Isolate Rhizosphere
136 2919034639 Paenarthrobacter nitroguajacolicus 247 Isolate Rhizosphere
137 2919051321 Sinomonas atrocyanea 1003 Isolate Rhizosphere
138 2919059106 Arthrobacter sp. 1088 Isolate Rhizosphere
139 2919391150 Arthrobacter ipis 2973 Isolate Unclassified
140 2919538618 Paenarthrobacter nitroguajacolicus 3945 Isolate Unclassified
141 2920879853 Kocuria salina CV6 Isolate Unclassified
142 2928121344 Plantibacter flavus 1756 Isolate Rhizosphere
143 2933418574 Jeotgalibacillus campisalis 4120 Isolate Rhizosphere
144 2939598168 Arthrobacter sp. 754 Isolate Rhizosphere
145 2939647034 Arthrobacter sp. 2762 Isolate Rhizosphere
146 2939660829 Mycetocola sp. 2940 Isolate Rhizosphere
147 2939674588 Arthrobacter bambusae 3552 Isolate Rhizosphere
148 2945916053 Arthrobacter ulcerisalmonis W1I2 Isolate Rhizosphere
149 2945920336 Pseudarthrobacter siccitolerans W1I3 Isolate Rhizosphere
150 2945941187 Arthrobacter pascens W1I14 Isolate Rhizosphere
151 2945956166 Arthrobacter globiformus W2I3 Isolate Rhizosphere
152 2946003308 Arthrobacter agilis W3I6 Isolate Rhizosphere
153 2946037020 Arthrobacter sp. W4I7 Isolate Rhizosphere
154 2946059875 Arthrobacter sp. SLBN-112 Isolate Rhizosphere
155 2953998280 Pseudarthrobacter sp. W1I19 Isolate Rhizosphere
156 2974302888 Pseudarthrobacter sp. SORGH_AS 212 Isolate Unclassified
157 3002998708 Actinomadura barringtoniae GKU 128 Isolate Unclassified
158 8004021418 Arthrobacter sp. SDTb3-6 Isolate Rhizosphere
159 8004025490 Arthrobacter wenxiniae AETb3-4 Isolate Rhizosphere
160 8053945823 Actinomadura terrae OS3-83 Isolate Rhizosphere
161 8056037122 Herbiconiux gentiana CPCC 205716 Isolate Rhizosphere
162 8057345674 Herbiconiux aconitum CPCC 205763 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 72.73
Metatranscriptomes 0
Isolates 27.27

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.88
Nodule 0
Rhizoplane 2.67
Rhizosphere 78.07
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0439465_0002167 3300041413 Bacteria 6455
2 Ga0065714_10009974 3300005288 Bacteria 5560
3 Ga0070658_10034997 3300005327 Bacteria 4043
4 Ga0070677_10010225 3300005333 Bacteria 3205
5 Ga0070669_100030519 3300005353 Bacteria 3890
6 Ga0070714_100009683 3300005435 Bacteria 7589
7 Ga0075432_10004794 3300006058 Bacteria 4602
8 Ga0075367_10033148 3300006178 Bacteria 2975
9 Ga0075428_100001088 3300006844 Bacteria 28927
10 Ga0075430_100057225 3300006846 Bacteria 3280
11 Ga0075429_100009857 3300006880 Bacteria 8283
12 Ga0105251_10010281 3300009011 Bacteria 5442
13 Ga0157373_10011342 3300013100 Bacteria 6554
14 Ga0157371_10003552 3300013102 Bacteria 14069
15 Ga0157370_10006407 3300013104 Bacteria 12981
16 Ga0157369_10002164 3300013105 Bacteria 23689
17 Ga0157369_10122272 3300013105 Bacteria 2761
18 Ga0213876_10000905 3300021384 Bacteria 19751
19 Ga0209025_1000250 3300025294 Bacteria 126596
20 Ga0207697_10005101 3300025315 Bacteria 6149
21 Ga0207655_1002797 3300025728 Bacteria 13548
22 Ga0207655_1004223 3300025728 Bacteria 10296
23 Ga0207682_10002217 3300025893 Bacteria 8767
24 Ga0207691_10007988 3300025940 Bacteria 10175
25 Ga0207683_10002078 3300026121 Bacteria 17678
26 Ga0207428_10004681 3300027907 Bacteria 12964
27 Ga0265327_10022792 3300031251 Bacteria 3730
28 Ga0307408_100022949 3300031548 Bacteria 4246
29 Ga0316575_10000745 3300031665 Bacteria 9774
30 Ga0316576_10056590 3300031727 Bacteria 2864
31 Ga0307405_10009824 3300031731 Bacteria 4922
32 Ga0307413_10014468 3300031824 Bacteria 4008
33 Ga0307410_10013879 3300031852 Bacteria 4718
34 Ga0307410_10031761 3300031852 Bacteria 3392
35 Ga0307406_10009055 3300031901 Bacteria 5568
36 Ga0307406_10020149 3300031901 Bacteria 3923
37 Ga0307407_10014053 3300031903 Bacteria 3907
38 Ga0307412_10001075 3300031911 Bacteria 15643
39 Ga0307412_10005202 3300031911 Bacteria 7292
40 Ga0307412_10013440 3300031911 Bacteria 4803
41 Ga0307412_10024039 3300031911 Bacteria 3757
42 Ga0307409_100005364 3300031995 Bacteria 7365
43 Ga0307416_100010317 3300032002 Bacteria 6165
44 Ga0307416_100018861 3300032002 Bacteria 4874
45 Ga0307416_100019359 3300032002 Bacteria 4824
46 Ga0307414_10032081 3300032004 Bacteria 3455
47 Ga0316574_0002763 3300035398 Bacteria 8911
48 Ga0316574_0004638 3300035398 Bacteria 7236
49 Ga0373937_0003915 3300036401 Bacteria 12595
50 Ga0316582_0000644 3300036647 Bacteria 13652
51 Ga0316582_0028298 3300036647 Bacteria 3394
52 Ga0316584_0004715 3300036712 Bacteria 9043
53 Ga0316584_0019669 3300036712 Bacteria 4882
54 Ga0395899_0002165 3300037312 Bacteria 16134
55 Ga0395899_0002453 3300037312 Bacteria 15063
56 Ga0395900_0014560 3300037418 Bacteria 8024
57 Ga0395900_0026493 3300037418 Bacteria 5936
58 Ga0395900_0040670 3300037418 Bacteria 4791
59 Ga0395900_0069550 3300037418 Bacteria 3618
60 Ga0395898_0016627 3300037466 Bacteria 7518
61 Ga0395898_0039508 3300037466 Bacteria 4671
62 Ga0395898_0066685 3300037466 Bacteria 3486
63 Ga0395901_0001750 3300038443 Bacteria 22414
64 Ga0395901_0046741 3300038443 Bacteria 4496
65 Ga0395901_0050750 3300038443 Bacteria 4309
66 Ga0436365_0025930 3300039437 Bacteria 22565
67 Ga0439466_0007469 3300041411 Bacteria 4140
68 Ga0451806_760714 3300041462 Bacteria 3961
69 Ga0439433_0000076 3300041999 Bacteria 12909
70 Ga0439442_000041 3300042002 Bacteria 29264
71 Ga0439442_000092 3300042002 Bacteria 21656
72 Ga0439449_0000809 3300042007 Bacteria 12053
73 Ga0439457_001619 3300042014 Bacteria 6717
74 Ga0450920_000186 3300042122 Bacteria 8980
75 Ga0450907_002982 3300042146 Bacteria 3098
76 Ga0439434_0000105 3300042435 Bacteria 21658
77 Ga0450918_001295 3300042531 Bacteria 5069
78 Ga0466966_0018632 3300044684 Bacteria 4574
79 Ga0466960_0013328 3300044901 Bacteria 3491
80 Ga0495590_0000242 3300046457 Bacteria 29848
81 Ga0495651_0006980 3300046462 Bacteria 8635
82 Ga0495653_0007142 3300046463 Bacteria 9151
83 Ga0495650_0001013 3300046471 Bacteria 31698
84 Ga0495580_0015759 3300046472 Bacteria 5693
85 Ga0495662_0003154 3300046476 Bacteria 8318
86 Ga0495664_0012270 3300046477 Bacteria 4852
87 Ga0495618_0027021 3300046514 Bacteria 3572
88 Ga0495640_0004427 3300046533 Bacteria 11213
89 Ga0495587_0003371 3300046536 Bacteria 10650
90 Ga0495667_0000893 3300046559 Bacteria 19286
91 Ga0495657_0003721 3300046675 Bacteria 12344
92 Ga0495613_0001720 3300046689 Bacteria 16658
93 Ga0495581_0004556 3300047315 Bacteria 8008
94 Ga0495672_0042329 3300047320 Bacteria 2747
95 Ga0495675_0007830 3300047444 Bacteria 6597
96 Ga0495602_0044516 3300048088 Bacteria 4025
97 Ga0496102_0041023 3300048905 Bacteria 4189
98 Ga0496103_0007580 3300048906 Bacteria 6464
99 Ga0496104_0034796 3300048907 Bacteria 4699
100 Ga0496114_0075905 3300048917 Bacteria 2831
101 Ga0496117_0001576 3300048920 Bacteria 32370
102 Ga0496122_0015960 3300048925 Bacteria 7143
103 Ga0501031_0003740 3300049568 Bacteria 9792
104 Ga0501034_0020053 3300049571 Bacteria 6828
105 Ga0501039_0000425 3300049575 Bacteria 30434
106 Ga0501040_0000957 3300049576 Bacteria 18246
107 Ga0501042_0000715 3300049578 Bacteria 18014
108 Ga0501043_0020915 3300049579 Bacteria 5131
109 Ga0501043_0051658 3300049579 Bacteria 3230
110 Ga0501047_0012246 3300049581 Bacteria 8121
111 Ga0501048_0001738 3300049582 Bacteria 16574
112 Ga0501070_0005309 3300049586 Bacteria 10990
113 Ga0501071_0001589 3300049587 Bacteria 13303
114 Ga0501072_0004411 3300049588 Bacteria 10688
115 Ga0501072_0041523 3300049588 Bacteria 3613
116 Ga0501074_0026114 3300049590 Bacteria 4235
117 Ga0501076_0001188 3300049592 Bacteria 17261
118 Ga0501080_0000083 3300049742 Bacteria 63863
119 Ga0501035_0044716 3300049822 Bacteria 3986
120 Ga0501045_0001229 3300049824 Bacteria 17066
121 nmdc:mga09592_9745_c1 3300050508 Bacteria 7803
122 nmdc:mga0qj67_59173_c1 3300050509 Bacteria 3038
123 Ga0495601_0045939 3300053077 Bacteria 2748
124 Ga0500635_0000761 3300053080 Bacteria 8027
125 Ga0495595_0007675 3300053084 Bacteria 4420
126 Ga0495619_0014383 3300053085 Bacteria 4997
127 Ga0500650_0017279 3300053098 Bacteria 3112
128 Ga0500556_0000086 3300053104 Bacteria 87063
129 Ga0500593_004219 3300053117 Bacteria 5542
130 Ga0500568_0000028 3300053139 Bacteria 161589
131 Ga0500573_0000001 3300053140 Bacteria 436394
132 Ga0500616_0000078 3300053153 Bacteria 202009
133 Ga0500616_0000543 3300053153 Bacteria 47141
134 Ga0500616_0003629 3300053153 Bacteria 11608
135 Ga0501082_0002581 3300060353 Bacteria 15844
136 Ga0530510_0022946 3300061734 Bacteria 4446
137 2537899530 2537561592 Bacteria 4348607
138 2643751917 2643221546 Bacteria 2910897
139 2739604442 2739367653 Bacteria 2780952
140 2808829990 2808606357 Bacteria 4466944
141 2808851165 2808606360 Bacteria 4404006
142 2808876308 2808606366 Bacteria 4415912
143 2808897846 2808606371 Bacteria 4251511
144 2812318235 2811994871 Bacteria 4497550
145 2817509789 2816332305 Bacteria 2697803
146 2844851647 2844849076 Bacteria 4091819
147 2844854770 2844852863 Bacteria 3849151
148 2856745532 2856741275 Bacteria 8096094
149 2857727622 2857727296 Bacteria 2745552
150 2857730119 2857729791 Bacteria 4040535
151 2857738756 2857737099 Bacteria 3104305
152 2857741609 2857740372 Bacteria 4782044
153 2870624208 2870622029 Bacteria 3643329
154 2891397934 2891395885 Bacteria 9251614
155 2891559685 2891554331 Bacteria 8812224
156 2891567613 2891562705 Bacteria 8039471
157 2893686224 2893684298 Bacteria 2897960
158 2904497924 2904497146 Bacteria 4731781
159 2904778947 2904776348 Bacteria 4658726
160 2905930831 2905926851 Bacteria 4423176
161 2919037958 2919034639 Bacteria 4763403
162 2919054739 2919051321 Bacteria 4210889
163 2919063156 2919059106 Bacteria 4991624
164 2919391630 2919391150 Bacteria 4884741
165 2919539382 2919538618 Bacteria 4677069
166 2920883035 2920879853 Bacteria 4216831
167 2928123343 2928121344 Bacteria 3972376
168 2933420100 2933418574 Bacteria 4476724
169 2939600613 2939598168 Bacteria 4687164
170 2939647037 2939647034 Bacteria 4681660
171 2939662627 2939660829 Bacteria 3784848
172 2939678715 2939674588 Bacteria 4844420
173 2945916058 2945916053 Bacteria 4555517
174 2945923811 2945920336 Bacteria 4501603
175 2945944541 2945941187 Bacteria 4682474
176 2945957271 2945956166 Bacteria 5110334
177 2946006972 2946003308 Bacteria 3857229
178 2946040448 2946037020 Bacteria 4900426
179 2946059880 2946059875 Bacteria 4386623
180 2954001710 2953998280 Bacteria 4812144
181 2974303886 2974302888 Bacteria 4369871
182 3002999845 3002998708 Bacteria 11715108
183 8004022228 8004021418 Bacteria 4313954
184 8004026508 8004025490 Bacteria 4327753
185 8053946632 8053945823 Bacteria 8962862
186 8056038959 8056037122 Bacteria 3854319
187 8057347858 8057345674 Bacteria 4160394
188 Ga0439465_0002167
189 Ga0065714_10009974
190 Ga0070658_10034997
191 Ga0070677_10010225
192 Ga0070669_100030519
193 Ga0070714_100009683
194 Ga0075432_10004794
195 Ga0075367_10033148
196 Ga0075428_100001088
197 Ga0075430_100057225
198 Ga0075429_100009857
199 Ga0105251_10010281
200 Ga0157373_10011342
201 Ga0157371_10003552
202 Ga0157370_10006407
203 Ga0157369_10002164
204 Ga0157369_10122272
205 Ga0213876_10000905
206 Ga0209025_1000250
207 Ga0207697_10005101
208 Ga0207655_1002797
209 Ga0207655_1004223
210 Ga0207682_10002217
211 Ga0207691_10007988
212 Ga0207683_10002078
213 Ga0207428_10004681
214 Ga0265327_10022792
215 Ga0307408_100022949
216 Ga0316575_10000745
217 Ga0316576_10056590
218 Ga0307405_10009824
219 Ga0307413_10014468
220 Ga0307410_10013879
221 Ga0307410_10031761
222 Ga0307406_10009055
223 Ga0307406_10020149
224 Ga0307407_10014053
225 Ga0307412_10001075
226 Ga0307412_10005202
227 Ga0307412_10013440
228 Ga0307412_10024039
229 Ga0307409_100005364
230 Ga0307416_100010317
231 Ga0307416_100018861
232 Ga0307416_100019359
233 Ga0307414_10032081
234 Ga0316574_0002763
235 Ga0316574_0004638
236 Ga0373937_0003915
237 Ga0316582_0000644
238 Ga0316582_0028298
239 Ga0316584_0004715
240 Ga0316584_0019669
241 Ga0395899_0002165
242 Ga0395899_0002453
243 Ga0395900_0014560
244 Ga0395900_0026493
245 Ga0395900_0040670
246 Ga0395900_0069550
247 Ga0395898_0016627
248 Ga0395898_0039508
249 Ga0395898_0066685
250 Ga0395901_0001750
251 Ga0395901_0046741
252 Ga0395901_0050750
253 Ga0436365_0025930
254 Ga0439466_0007469
255 Ga0451806_760714
256 Ga0439433_0000076
257 Ga0439442_000041
258 Ga0439442_000092
259 Ga0439449_0000809
260 Ga0439457_001619
261 Ga0450920_000186
262 Ga0450907_002982
263 Ga0439434_0000105
264 Ga0450918_001295
265 Ga0466966_0018632
266 Ga0466960_0013328
267 Ga0495590_0000242
268 Ga0495651_0006980
269 Ga0495653_0007142
270 Ga0495650_0001013
271 Ga0495580_0015759
272 Ga0495662_0003154
273 Ga0495664_0012270
274 Ga0495618_0027021
275 Ga0495640_0004427
276 Ga0495587_0003371
277 Ga0495667_0000893
278 Ga0495657_0003721
279 Ga0495613_0001720
280 Ga0495581_0004556
281 Ga0495672_0042329
282 Ga0495675_0007830
283 Ga0495602_0044516
284 Ga0496102_0041023
285 Ga0496103_0007580
286 Ga0496104_0034796
287 Ga0496114_0075905
288 Ga0496117_0001576
289 Ga0496122_0015960
290 Ga0501031_0003740
291 Ga0501034_0020053
292 Ga0501039_0000425
293 Ga0501040_0000957
294 Ga0501042_0000715
295 Ga0501043_0020915
296 Ga0501043_0051658
297 Ga0501047_0012246
298 Ga0501048_0001738
299 Ga0501070_0005309
300 Ga0501071_0001589
301 Ga0501072_0004411
302 Ga0501072_0041523
303 Ga0501074_0026114
304 Ga0501076_0001188
305 Ga0501080_0000083
306 Ga0501035_0044716
307 Ga0501045_0001229
308 nmdc:mga09592_9745_c1
309 nmdc:mga0qj67_59173_c1
310 Ga0495601_0045939
311 Ga0500635_0000761
312 Ga0495595_0007675
313 Ga0495619_0014383
314 Ga0500650_0017279
315 Ga0500556_0000086
316 Ga0500593_004219
317 Ga0500568_0000028
318 Ga0500573_0000001
319 Ga0500616_0000078
320 Ga0500616_0000543
321 Ga0500616_0003629
322 Ga0501082_0002581
323 Ga0530510_0022946
324 2537899530
325 2643751917
326 2739604442
327 2808829990
328 2808851165
329 2808876308
330 2808897846
331 2812318235
332 2817509789
333 2844851647
334 2844854770
335 2856745532
336 2857727622
337 2857730119
338 2857738756
339 2857741609
340 2870624208
341 2891397934
342 2891559685
343 2891567613
344 2893686224
345 2904497924
346 2904778947
347 2905930831
348 2919037958
349 2919054739
350 2919063156
351 2919391630
352 2919539382
353 2920883035
354 2928123343
355 2933420100
356 2939600613
357 2939647037
358 2939662627
359 2939678715
360 2945916058
361 2945923811
362 2945944541
363 2945957271
364 2946006972
365 2946040448
366 2946059880
367 2954001710
368 2974303886
369 3002999845
370 8004022228
371 8004026508
372 8053946632
373 8056038959
374 8057347858

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF11897

DUF3417

Protein of unknown function (DUF3417)

21

128

0.98

PF00343

Phosphorylase

Carbohydrate phosphorylase

362

644

0.79

Structural Annotation

Top 5 Hits

ID Description Score Start End
6gnf-assembly2.cif.gz_B granule bound starch synthase from cyanobacterium sp. clg1 bound to acarbose and adp 0.7583 100 729
3l01-assembly2.cif.gz_B crystal structure of monomeric glycogen synthase from pyrococcus abyssi 0.7558 106 723
6gnf-assembly2.cif.gz_B granule bound starch synthase from cyanobacterium sp. clg1 bound to acarbose and adp 0.75 100 729
3l01-assembly2.cif.gz_B crystal structure of monomeric glycogen synthase from pyrococcus abyssi 0.7434 106 723
1l7x-assembly1.cif.gz_A-2 human liver glycogen phosphorylase b complexed with caffeine, n-acetyl-beta-d-glucopyranosylamine, and cp-403,700 0.7398 37 726
ID Description Score Start End Superfamily
af_P9WMW1_434_764_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.955 431 771 3.40.50.2000
af_P9WMW1_434_764_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9438 431 771 3.40.50.2000
af_P9WMW1_237_433_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.941 237 427 3.40.50.2000
af_P9WMW1_237_433_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9086 237 427 3.40.50.2000
af_Q59025_257_519_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.8538 415 726 3.40.50.2000
ID Description Score Start End GO Terms
AF-A0A0K2QXT9-F1-model_v4 deleted 0.9877 747 870
AF-A0A2R7RAI7-F1-model_v4 DUF3417 domain-containing protein 0.9869 231 870 GO:0005975
GO:0008184
GO:0030170
AF-A0A1S9M3G1-F1-model_v4 Glycogen phosphorylase 0.9863 232 424 GO:0004645
GO:0005975
GO:0030170
AF-A0A4R5JX73-F1-model_v4 Alpha-glucan family phosphorylase 0.9854 134 651 GO:0005975
GO:0008184
GO:0030170
AF-A0A2R7RAI7-F1-model_v4 DUF3417 domain-containing protein 0.9824 231 870 GO:0005975
GO:0008184
GO:0030170

Map