F288050

General Info

Members Datasets Scaffolds Average Seq Length
187 130 374 253

Family's Representative Sequence

Representative Sequence 3300039438|Ga0436360_1274768|Ga0436360_1274768_854_1651
Length 265
Sequence MLAAANRVRYRMRMQIQGRTFVISGGSSGLGAACVREFSQAGAKVVICDVNPPREARDGDGVHYLRTDVTSEADVKAAVGLAVSRFGALHGAVCCAGVATAERVVGREGPQPLEHFARVIAINLTGTFNVIRLAAAEMLRRSGVEPGEDRGVIVCTASVAAFDGQIGQAAYSASKGGVVGMTLSIAREFAQHQIRVASIAPGIFDTPMLAGLPDAARESLGKQTPFPARLGNPQEYAALARHIVENQMLNGEVIRLDGAIRLAPR

Samples

Sample ID Description Type Environment
1 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
7 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
8 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
9 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
10 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
11 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
12 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
13 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
14 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
15 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
16 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
17 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
18 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
19 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
20 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
21 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
22 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
23 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
24 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
25 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
26 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
27 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
28 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
29 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
30 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
31 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
32 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
33 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
34 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
35 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
36 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
37 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
38 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
39 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
40 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
41 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
42 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
43 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
44 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
45 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
46 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
47 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
48 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
49 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
50 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
51 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
52 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
53 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
54 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
55 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
56 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
57 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
78 3300028017 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE4 Metagenome Rhizosphere
79 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
81 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
82 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
83 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
84 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
85 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
86 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
87 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
88 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
89 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
90 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
91 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
92 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
93 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
94 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
95 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
96 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
97 3300034820 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2 Metagenome Rhizosphere
98 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
99 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
100 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
101 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
102 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
103 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
104 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
105 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
106 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
107 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
108 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
109 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
110 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
111 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
112 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
113 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
114 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
115 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
116 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
117 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
118 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
119 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
120 3300049851 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_B_0_drought Metagenome Rhizosphere
121 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
122 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
123 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
124 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
125 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
126 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
127 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
128 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
129 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
130 2854911287 Brucella lupini LUP21 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 98.4
Metatranscriptomes 1.07
Isolates 0.53

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 91.98
Stem 0
Stem Tuber 0
Unclassified 1.07

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0436360_1274768 3300039438 Bacteria 1830
2 JGI25406J46586_10014973 3300003203 Bacteria 3282
3 Ga0070683_100135310 3300005329 Bacteria 2333
4 Ga0070690_100226371 3300005330 Bacteria 1313
5 Ga0068869_100179608 3300005334 Bacteria 1659
6 Ga0070687_100031803 3300005343 Bacteria 2591
7 Ga0070669_100011505 3300005353 Bacteria 6280
8 Ga0070675_100068966 3300005354 Bacteria 2929
9 Ga0070673_100144545 3300005364 Bacteria 2010
10 Ga0070714_100038915 3300005435 Bacteria 4001
11 Ga0070714_100550031 3300005435 Bacteria 1105
12 Ga0070701_10024390 3300005438 Bacteria 2925
13 Ga0070700_100187689 3300005441 Bacteria 1443
14 Ga0070694_100026036 3300005444 Bacteria 3789
15 Ga0070708_100829130 3300005445 Bacteria 869
16 Ga0070662_100105483 3300005457 Bacteria 2139
17 Ga0068867_100001663 3300005459 Bacteria 15488
18 Ga0070706_100341977 3300005467 Bacteria 1395
19 Ga0070706_100520931 3300005467 Bacteria 1106
20 Ga0070707_100029613 3300005468 Bacteria 5212
21 Ga0070707_100080540 3300005468 Bacteria 3143
22 Ga0070698_100128122 3300005471 Bacteria 2495
23 Ga0070698_100435987 3300005471 Bacteria 1245
24 Ga0070699_100091831 3300005518 Bacteria 2655
25 Ga0070699_100669387 3300005518 Bacteria 948
26 Ga0070697_100035798 3300005536 Bacteria 4006
27 Ga0070697_100044332 3300005536 Bacteria 3602
28 Ga0070672_100054183 3300005543 Bacteria 3139
29 Ga0070695_100137271 3300005545 Bacteria 1691
30 Ga0070704_100000329 3300005549 Bacteria 21434
31 Ga0070664_100006244 3300005564 Bacteria 9623
32 Ga0068857_100022033 3300005577 Bacteria 5607
33 Ga0068859_100012770 3300005617 Bacteria 8440
34 Ga0068861_100005562 3300005719 Bacteria 8537
35 Ga0068870_10032169 3300005840 Bacteria 2664
36 Ga0068860_100260579 3300005843 Bacteria 1690
37 Ga0068862_100001360 3300005844 Bacteria 22709
38 Ga0068862_100447849 3300005844 Bacteria 1217
39 Ga0081455_10002824 3300005937 Bacteria 20455
40 Ga0081540_1027158 3300005983 Bacteria 3249
41 Ga0081539_10001474 3300005985 Bacteria 39921
42 Ga0081539_10069986 3300005985 Bacteria 1885
43 Ga0070717_10381918 3300006028 Bacteria 1263
44 Ga0075428_100022168 3300006844 Bacteria 7031
45 Ga0075428_100197652 3300006844 Bacteria 2175
46 Ga0075430_100039279 3300006846 Bacteria 4008
47 Ga0075434_100096301 3300006871 Bacteria 2965
48 Ga0075429_100163004 3300006880 Bacteria 1952
49 Ga0075436_100285676 3300006914 Bacteria 1180
50 Ga0097620_100012769 3300006931 Bacteria 8440
51 Ga0075435_100059768 3300007076 Bacteria 3089
52 Ga0075435_100221120 3300007076 Bacteria 1608
53 Ga0111539_10030252 3300009094 Bacteria 6584
54 Ga0114129_10003383 3300009147 Bacteria 22408
55 Ga0114129_10352886 3300009147 Bacteria 1948
56 Ga0105243_10087115 3300009148 Bacteria 2562
57 Ga0105242_10743495 3300009176 Unclassified 965
58 Ga0105249_10002731 3300009553 Bacteria 15264
59 Ga0105249_10463565 3300009553 Bacteria 1307
60 Ga0157374_10110637 3300013296 Bacteria 2642
61 Ga0157380_10159940 3300014326 Bacteria 1956
62 Ga0157377_10224540 3300014745 Bacteria 1204
63 Ga0213873_10000467 3300021358 Bacteria 6489
64 Ga0213872_10001453 3300021361 Bacteria 15423
65 Ga0213872_10004551 3300021361 Bacteria 7331
66 Ga0213872_10125760 3300021361 Bacteria 1132
67 Ga0213874_10001051 3300021377 Bacteria 5663
68 Ga0213876_10001043 3300021384 Bacteria 17905
69 Ga0213876_10007942 3300021384 Bacteria 5756
70 Ga0213875_10000001 3300021388 Bacteria 2793540
71 Ga0224712_10151661 3300022467 Bacteria 1027
72 Ga0207647_10115934 3300025904 Bacteria 1581
73 Ga0207645_10051257 3300025907 Bacteria 2637
74 Ga0207643_10014734 3300025908 Bacteria 4251
75 Ga0207684_10371702 3300025910 Bacteria 1230
76 Ga0207684_10431289 3300025910 Bacteria 1132
77 Ga0207662_10062566 3300025918 Bacteria 2236
78 Ga0207681_10008021 3300025923 Bacteria 6460
79 Ga0207664_10043652 3300025929 Bacteria 3508
80 Ga0207664_10077987 3300025929 Bacteria 2686
81 Ga0207664_10108024 3300025929 Bacteria 2309
82 Ga0207664_10158326 3300025929 Bacteria 1930
83 Ga0207706_10076826 3300025933 Bacteria 2937
84 Ga0207686_10180131 3300025934 Bacteria 1498
85 Ga0207704_10219570 3300025938 Bacteria 1405
86 Ga0207691_10069277 3300025940 Bacteria 3187
87 Ga0207691_10558316 3300025940 Bacteria 970
88 Ga0207679_10266426 3300025945 Bacteria 1463
89 Ga0207651_10710528 3300025960 Bacteria 886
90 Ga0207712_10053146 3300025961 Bacteria 2841
91 Ga0207712_10060454 3300025961 Unclassified 2686
92 Ga0207640_10254069 3300025981 Bacteria 1366
93 Ga0207639_10670067 3300026041 Bacteria 961
94 Ga0207708_10059760 3300026075 Bacteria 2910
95 Ga0207648_10002317 3300026089 Bacteria 20547
96 Ga0207674_10025038 3300026116 Bacteria 6369
97 Ga0207674_10028193 3300026116 Bacteria 5930
98 Ga0207675_100154561 3300026118 Bacteria 2186
99 Ga0207675_100265560 3300026118 Bacteria 1664
100 Ga0207428_10008886 3300027907 Bacteria 9050
101 Ga0265356_1000393 3300028017 Bacteria 7951
102 Ga0268265_10001749 3300028380 Bacteria 17453
103 Ga0265338_10001033 3300028800 Bacteria 46557
104 Ga0265760_10060636 3300031090 Bacteria 1149
105 Ga0265332_10015100 3300031238 Bacteria 3412
106 Ga0265325_10005926 3300031241 Bacteria 7489
107 Ga0265325_10031884 3300031241 Bacteria 2817
108 Ga0265339_10006424 3300031249 Bacteria 7711
109 Ga0265331_10115108 3300031250 Bacteria 1231
110 Ga0265316_10431437 3300031344 Bacteria 946
111 Ga0307408_100483337 3300031548 Bacteria 1081
112 Ga0265313_10000067 3300031595 Bacteria 101468
113 Ga0265342_10038860 3300031712 Bacteria 2895
114 Ga0307410_10229659 3300031852 Bacteria 1432
115 Ga0307407_10179104 3300031903 Bacteria 1403
116 Ga0307409_100054771 3300031995 Bacteria 3074
117 Ga0307409_100138292 3300031995 Bacteria 2094
118 Ga0307409_100746829 3300031995 Bacteria 982
119 Ga0307416_100015022 3300032002 Bacteria 5331
120 Ga0307416_100017064 3300032002 Bacteria 5066
121 Ga0307416_100079489 3300032002 Bacteria 2764
122 Ga0307416_100411647 3300032002 Bacteria 1393
123 Ga0307416_100527622 3300032002 Bacteria 1250
124 Ga0307414_10029407 3300032004 Bacteria 3576
125 Ga0307411_10236672 3300032005 Bacteria 1427
126 Ga0307415_100005459 3300032126 Bacteria 6754
127 Ga0307415_100230869 3300032126 Bacteria 1490
128 Ga0373959_0071441 3300034820 Bacteria 785
129 Ga0373937_0180896 3300036401 Bacteria 1980
130 Ga0373937_0219512 3300036401 Bacteria 1790
131 Ga0395899_0169041 3300037312 Bacteria 1540
132 Ga0436364_0170091 3300037853 Bacteria 2966
133 Ga0436364_0273345 3300037853 Bacteria 2794207
134 Ga0436364_0635215 3300037853 Bacteria 1887
135 Ga0436364_1440125 3300037853 Bacteria 1407
136 Ga0395901_0048193 3300038443 Bacteria 4424
137 Ga0436365_0244624 3300039437 Bacteria 5615
138 Ga0436365_0308026 3300039437 Bacteria 16907
139 Ga0436365_0370511 3300039437 Bacteria 26229
140 Ga0436365_1112018 3300039437 Bacteria 3564
141 Ga0436360_0258135 3300039438 Bacteria 1323
142 Ga0436360_0596994 3300039438 Bacteria 2600
143 Ga0436360_0643207 3300039438 Bacteria 3268
144 Ga0436361_0145360 3300039447 Bacteria 4615
145 Ga0436361_0171269 3300039447 Bacteria 858
146 Ga0436361_0308402 3300039447 Bacteria 26389
147 Ga0436361_0402005 3300039447 Bacteria 925
148 Ga0436361_0583822 3300039447 Bacteria 4209
149 Ga0436361_0688156 3300039447 Bacteria 11359
150 Ga0436361_0810784 3300039447 Bacteria 1190
151 Ga0436361_1052934 3300039447 Bacteria 13812
152 Ga0436361_1105040 3300039447 Bacteria 4328
153 Ga0436363_0699073 3300039450 Bacteria 23998
154 Ga0436362_0173045 3300039453 Bacteria 2092
155 Ga0436362_0689840 3300039453 Bacteria 7182
156 Ga0436362_0694008 3300039453 Bacteria 2536
157 Ga0436362_0913443 3300039453 Bacteria 2651
158 Ga0466966_0006361 3300044684 Bacteria 7810
159 Ga0466963_0137912 3300044694 Bacteria 1688
160 Ga0466970_0148864 3300044765 Bacteria 1292
161 Ga0466957_0008860 3300044842 Bacteria 5730
162 Ga0466960_0031868 3300044901 Bacteria 2435
163 Ga0466959_0255354 3300045049 Bacteria 1208
164 Ga0466958_0000623 3300045836 Bacteria 15166
165 Ga0466958_0005787 3300045836 Bacteria 6685
166 Ga0466958_0259923 3300045836 Bacteria 1111
167 Ga0466967_0038924 3300045976 Bacteria 4082
168 Ga0495687_002553 3300047443 Bacteria 14399
169 Ga0496120_0010558 3300048923 Bacteria 6430
170 Ga0501042_0377738 3300049578 Bacteria 1026
171 Ga0501047_0204180 3300049581 Bacteria 1836
172 Ga0501035_0027663 3300049822 Bacteria 5183
173 Ga0501045_0382208 3300049824 Bacteria 1048
174 Ga0501212_024864 3300049851 Bacteria 944
175 nmdc:mga05p37_2014_c1 3300050507 Bacteria 23707
176 nmdc:mga0qj67_33531_c1 3300050509 Bacteria 4007
177 nmdc:mga08y16_174248_c1 3300050511 Bacteria 2234
178 nmdc:mga0n895_17074_c1 3300050512 Bacteria 6682
179 nmdc:mga0n895_5835_c1 3300050512 Bacteria 10350
180 nmdc:mga0n895_709701_c1 3300050512 Bacteria 1001
181 nmdc:mga0rr50_219382_c1 3300050513 Bacteria 1570
182 nmdc:mga0rr50_833354_c1 3300050513 Bacteria 787
183 nmdc:mga08x19_268524_c1 3300050514 Bacteria 1180
184 nmdc:mga0a205_52517_c1 3300050515 Bacteria 3933
185 Ga0501084_0394121 3300054114 Bacteria 1170
186 Ga0590071_068065 3300059421 Bacteria 876
187 2854915050 2854911287 Bacteria 5582813
188 Ga0436360_1274768
189 JGI25406J46586_10014973
190 Ga0070683_100135310
191 Ga0070690_100226371
192 Ga0068869_100179608
193 Ga0070687_100031803
194 Ga0070669_100011505
195 Ga0070675_100068966
196 Ga0070673_100144545
197 Ga0070714_100038915
198 Ga0070714_100550031
199 Ga0070701_10024390
200 Ga0070700_100187689
201 Ga0070694_100026036
202 Ga0070708_100829130
203 Ga0070662_100105483
204 Ga0068867_100001663
205 Ga0070706_100341977
206 Ga0070706_100520931
207 Ga0070707_100029613
208 Ga0070707_100080540
209 Ga0070698_100128122
210 Ga0070698_100435987
211 Ga0070699_100091831
212 Ga0070699_100669387
213 Ga0070697_100035798
214 Ga0070697_100044332
215 Ga0070672_100054183
216 Ga0070695_100137271
217 Ga0070704_100000329
218 Ga0070664_100006244
219 Ga0068857_100022033
220 Ga0068859_100012770
221 Ga0068861_100005562
222 Ga0068870_10032169
223 Ga0068860_100260579
224 Ga0068862_100001360
225 Ga0068862_100447849
226 Ga0081455_10002824
227 Ga0081540_1027158
228 Ga0081539_10001474
229 Ga0081539_10069986
230 Ga0070717_10381918
231 Ga0075428_100022168
232 Ga0075428_100197652
233 Ga0075430_100039279
234 Ga0075434_100096301
235 Ga0075429_100163004
236 Ga0075436_100285676
237 Ga0097620_100012769
238 Ga0075435_100059768
239 Ga0075435_100221120
240 Ga0111539_10030252
241 Ga0114129_10003383
242 Ga0114129_10352886
243 Ga0105243_10087115
244 Ga0105242_10743495
245 Ga0105249_10002731
246 Ga0105249_10463565
247 Ga0157374_10110637
248 Ga0157380_10159940
249 Ga0157377_10224540
250 Ga0213873_10000467
251 Ga0213872_10001453
252 Ga0213872_10004551
253 Ga0213872_10125760
254 Ga0213874_10001051
255 Ga0213876_10001043
256 Ga0213876_10007942
257 Ga0213875_10000001
258 Ga0224712_10151661
259 Ga0207647_10115934
260 Ga0207645_10051257
261 Ga0207643_10014734
262 Ga0207684_10371702
263 Ga0207684_10431289
264 Ga0207662_10062566
265 Ga0207681_10008021
266 Ga0207664_10043652
267 Ga0207664_10077987
268 Ga0207664_10108024
269 Ga0207664_10158326
270 Ga0207706_10076826
271 Ga0207686_10180131
272 Ga0207704_10219570
273 Ga0207691_10069277
274 Ga0207691_10558316
275 Ga0207679_10266426
276 Ga0207651_10710528
277 Ga0207712_10053146
278 Ga0207712_10060454
279 Ga0207640_10254069
280 Ga0207639_10670067
281 Ga0207708_10059760
282 Ga0207648_10002317
283 Ga0207674_10025038
284 Ga0207674_10028193
285 Ga0207675_100154561
286 Ga0207675_100265560
287 Ga0207428_10008886
288 Ga0265356_1000393
289 Ga0268265_10001749
290 Ga0265338_10001033
291 Ga0265760_10060636
292 Ga0265332_10015100
293 Ga0265325_10005926
294 Ga0265325_10031884
295 Ga0265339_10006424
296 Ga0265331_10115108
297 Ga0265316_10431437
298 Ga0307408_100483337
299 Ga0265313_10000067
300 Ga0265342_10038860
301 Ga0307410_10229659
302 Ga0307407_10179104
303 Ga0307409_100054771
304 Ga0307409_100138292
305 Ga0307409_100746829
306 Ga0307416_100015022
307 Ga0307416_100017064
308 Ga0307416_100079489
309 Ga0307416_100411647
310 Ga0307416_100527622
311 Ga0307414_10029407
312 Ga0307411_10236672
313 Ga0307415_100005459
314 Ga0307415_100230869
315 Ga0373959_0071441
316 Ga0373937_0180896
317 Ga0373937_0219512
318 Ga0395899_0169041
319 Ga0436364_0170091
320 Ga0436364_0273345
321 Ga0436364_0635215
322 Ga0436364_1440125
323 Ga0395901_0048193
324 Ga0436365_0244624
325 Ga0436365_0308026
326 Ga0436365_0370511
327 Ga0436365_1112018
328 Ga0436360_0258135
329 Ga0436360_0596994
330 Ga0436360_0643207
331 Ga0436361_0145360
332 Ga0436361_0171269
333 Ga0436361_0308402
334 Ga0436361_0402005
335 Ga0436361_0583822
336 Ga0436361_0688156
337 Ga0436361_0810784
338 Ga0436361_1052934
339 Ga0436361_1105040
340 Ga0436363_0699073
341 Ga0436362_0173045
342 Ga0436362_0689840
343 Ga0436362_0694008
344 Ga0436362_0913443
345 Ga0466966_0006361
346 Ga0466963_0137912
347 Ga0466970_0148864
348 Ga0466957_0008860
349 Ga0466960_0031868
350 Ga0466959_0255354
351 Ga0466958_0000623
352 Ga0466958_0005787
353 Ga0466958_0259923
354 Ga0466967_0038924
355 Ga0495687_002553
356 Ga0496120_0010558
357 Ga0501042_0377738
358 Ga0501047_0204180
359 Ga0501035_0027663
360 Ga0501045_0382208
361 Ga0501212_024864
362 nmdc:mga05p37_2014_c1
363 nmdc:mga0qj67_33531_c1
364 nmdc:mga08y16_174248_c1
365 nmdc:mga0n895_17074_c1
366 nmdc:mga0n895_5835_c1
367 nmdc:mga0n895_709701_c1
368 nmdc:mga0rr50_219382_c1
369 nmdc:mga0rr50_833354_c1
370 nmdc:mga08x19_268524_c1
371 nmdc:mga0a205_52517_c1
372 Ga0501084_0394121
373 Ga0590071_068065
374 2854915050

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13561

adh_short_C2

Enoyl-(Acyl carrier protein) reductase

25

260

0.93

PF00106

adh_short

short chain dehydrogenase

19

217

0.9

PF08659

KR

KR domain

19

205

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
4o5o-assembly1.cif.gz_B-2 x-ray crystal structure of a 3-hydroxyacyl-coa dehydrogenase from brucella suis 0.9472 1 255
3tl3-assembly1.cif.gz_B-2 structure of a short-chain type dehydrogenase/reductase from mycobacterium ulcerans 0.9468 6 249
4pn3-assembly1.cif.gz_A crystal structure of 3-hydroxyacyl-coa-dehydrogenase from brucella melitensis 0.9461 1 255
4pn3-assembly2.cif.gz_F crystal structure of 3-hydroxyacyl-coa-dehydrogenase from brucella melitensis 0.9445 1 255
4pn3-assembly2.cif.gz_H crystal structure of 3-hydroxyacyl-coa-dehydrogenase from brucella melitensis 0.943 1 255
ID Description Score Start End Superfamily
af_Q99714_1_261_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9415 1 254 3.40.50.720
af_Q86JE3_1_263_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9386 1 253 3.40.50.720
3tpcH00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9312 3 251 3.40.50.720
af_Q99714_1_261_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9308 1 254 3.40.50.720
af_Q86JE3_1_263_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9245 1 253 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A522KCH5-F1-model_v4 deleted 0.9896 1 128
AF-A0A831U9B9-F1-model_v4 SDR family NAD(P)-dependent oxidoreductase 0.9878 1 145 GO:0016491
AF-A0A432IZV6-F1-model_v4 3-hydroxyacyl-CoA dehydrogenase 0.9849 1 121 GO:0016491
AF-V4QA13-F1-model_v4 3-hydroxyacyl-CoA dehydrogenase 0.983 1 126 GO:0016491
AF-A0A1I2RTD9-F1-model_v4 Short chain dehydrogenase 0.979 1 126 GO:0016491

Map