F287906

General Info

Members Datasets Scaffolds Average Seq Length
187 118 374 276

Family's Representative Sequence

Representative Sequence 3300031727|Ga0316576_10074053|Ga0316576_100740533
Length 316
Sequence MGRGRNERLVAVLLAGGLGVVVLIAGSVVAAHGSSPGPETAGRLPSTPSEVRVALVTGSTGGLGREVARRLAAQGAHVIVHGRNVERGEALVAEIEAQGRGSARFIAADLASLAEVRSLAETVLADYDRLDLLVNNAGIWLGGERQVSDDGHELHFQVNYLSGFLLTRMLLPLLRESAPARIIQVSSIAQAPIDFDDVMLEEGYDPSRAYAQSKLAQVMFTEDLAAELEGSGVMALSLHPATLMDTDMVVERDIRPRASVEEGTEAVMHLIEASDVESGDYYQGLERTRPHEQADDPAAREELRRLSYRLTGAPGG

Samples

Sample ID Description Type Environment
1 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
2 3300003659 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
3 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
6 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
7 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
8 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
9 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
10 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
11 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
12 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
13 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
14 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
15 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
16 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
17 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
18 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
19 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
20 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
21 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
22 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
23 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
24 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
25 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
26 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
27 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
28 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
29 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
30 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
31 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
32 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
33 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
34 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
35 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
36 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
37 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
38 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
39 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
40 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
41 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
42 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
43 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
66 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
67 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
68 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
69 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
70 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
71 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
72 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
73 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
74 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
75 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
76 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
77 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
78 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
79 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
80 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
81 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
82 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
83 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
84 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
85 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
86 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
87 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
88 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
89 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
90 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
91 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
92 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
93 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
94 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
95 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
96 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
97 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
98 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
99 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
100 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
101 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
102 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
103 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
104 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
105 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
106 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
107 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
108 3300053163 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 endosphere Metagenome Endosphere
109 3300053735 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 endosphere Metagenome Endosphere
110 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
111 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
112 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
113 2513237098 Bradyrhizobium elkanii WSM2783 Isolate Nodule
114 2524023210 Bradyrhizobium sp. Ai1a-2 Isolate Nodule
115 2885383462 Bradyrhizobium sp. Leo170 Isolate Unclassified
116 2891395885 Microbispora catharanthi CR1-09 Isolate Unclassified
117 2903768456 Bradyrhizobium sp. Leo121 Isolate Unclassified
118 8056681323 Bradyrhizobium cenepequi CNPSo 4026 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 96.79
Metatranscriptomes 0
Isolates 3.21

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.74
Nodule 1.6
Rhizoplane 0
Rhizosphere 89.84
Stem 0
Stem Tuber 0
Unclassified 4.81

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0316576_10074053 3300031727 Bacteria 2517
2 JGI25404J52841_10007734 3300003659 Bacteria 2278
3 Ga0070670_100028330 3300005331 Bacteria 4821
4 Ga0070670_100234364 3300005331 Bacteria 1598
5 Ga0070670_100266137 3300005331 Bacteria 1495
6 Ga0070680_100025680 3300005336 Bacteria 4710
7 Ga0070680_100243400 3300005336 Bacteria 1520
8 Ga0070680_100371668 3300005336 Bacteria 1217
9 Ga0070680_100424762 3300005336 Bacteria 1134
10 Ga0070682_100149155 3300005337 Bacteria 1603
11 Ga0070689_100182312 3300005340 Bacteria 1706
12 Ga0070661_100592390 3300005344 Bacteria 896
13 Ga0070709_10000406 3300005434 Bacteria 26303
14 Ga0070709_10006590 3300005434 Bacteria 6333
15 Ga0070709_10014513 3300005434 Bacteria 4456
16 Ga0070714_100239638 3300005435 Bacteria 1674
17 Ga0070714_100397673 3300005435 Bacteria 1302
18 Ga0070713_100130780 3300005436 Bacteria 2213
19 Ga0070711_100003409 3300005439 Bacteria 9259
20 Ga0070711_100006571 3300005439 Bacteria 7018
21 Ga0070711_100385344 3300005439 Bacteria 1134
22 Ga0070681_10010660 3300005458 Bacteria 9084
23 Ga0070681_10037675 3300005458 Bacteria 4851
24 Ga0070681_10122756 3300005458 Bacteria 2530
25 Ga0070679_100008045 3300005530 Bacteria 9908
26 Ga0070679_100123017 3300005530 Bacteria 2578
27 Ga0070684_100047398 3300005535 Bacteria 3724
28 Ga0070672_100065710 3300005543 Bacteria 2870
29 Ga0070665_100388554 3300005548 Bacteria 1403
30 Ga0068855_100013783 3300005563 Bacteria 9746
31 Ga0068855_100604521 3300005563 Unclassified 1182
32 Ga0068855_100715325 3300005563 Bacteria 1070
33 Ga0068857_100049715 3300005577 Bacteria 3720
34 Ga0068857_100382871 3300005577 Bacteria 1306
35 Ga0068856_100214916 3300005614 Unclassified 1938
36 Ga0068856_100349022 3300005614 Bacteria 1498
37 Ga0068870_10178059 3300005840 Bacteria 1274
38 Ga0068860_100000213 3300005843 Bacteria 91105
39 Ga0081455_10001795 3300005937 Bacteria 25921
40 Ga0081455_10034807 3300005937 Bacteria 4509
41 Ga0081455_10038714 3300005937 Bacteria 4221
42 Ga0081455_10126407 3300005937 Bacteria 2006
43 Ga0081540_1007492 3300005983 Bacteria 7771
44 Ga0081540_1015969 3300005983 Bacteria 4730
45 Ga0081540_1016844 3300005983 Bacteria 4551
46 Ga0081540_1017127 3300005983 Bacteria 4499
47 Ga0081540_1110193 3300005983 Bacteria 1166
48 Ga0081539_10000148 3300005985 Bacteria 163442
49 Ga0070717_10007106 3300006028 Bacteria 8295
50 Ga0070717_10294427 3300006028 Bacteria 1442
51 Ga0075363_100083744 3300006048 Bacteria 1748
52 Ga0070715_10042089 3300006163 Bacteria 1918
53 Ga0070716_100007779 3300006173 Bacteria 5291
54 Ga0070716_100140434 3300006173 Bacteria 1539
55 Ga0070712_100005474 3300006175 Bacteria 7861
56 Ga0070712_100044606 3300006175 Bacteria 3058
57 Ga0075433_10439585 3300006852 Bacteria 1150
58 Ga0075436_100262395 3300006914 Bacteria 1232
59 Ga0099795_10056961 3300007788 Bacteria 1439
60 Ga0105240_10013910 3300009093 Bacteria 11016
61 Ga0105240_10024872 3300009093 Bacteria 7883
62 Ga0105241_10387049 3300009174 Bacteria 1223
63 Ga0105241_10551166 3300009174 Bacteria 1035
64 Ga0105237_10572692 3300009545 Bacteria 1136
65 Ga0157373_10256136 3300013100 Bacteria 1238
66 Ga0157370_10073443 3300013104 Bacteria 3227
67 Ga0157370_10200375 3300013104 Bacteria 1852
68 Ga0157370_10268033 3300013104 Unclassified 1578
69 Ga0157369_10026168 3300013105 Bacteria 6473
70 Ga0157369_10080112 3300013105 Bacteria 3497
71 Ga0157369_10212521 3300013105 Bacteria 2027
72 Ga0157378_10582472 3300013297 Bacteria 1128
73 Ga0157372_10035591 3300013307 Bacteria 5482
74 Ga0157372_10445674 3300013307 Bacteria 1509
75 Ga0213876_10004510 3300021384 Bacteria 7780
76 Ga0209233_1003530 3300025261 Bacteria 5497
77 Ga0207692_10000175 3300025898 Bacteria 20519
78 Ga0207692_10023239 3300025898 Bacteria 2864
79 Ga0207692_10068177 3300025898 Bacteria 1864
80 Ga0207688_10186619 3300025901 Bacteria 1239
81 Ga0207685_10005132 3300025905 Bacteria 3420
82 Ga0207685_10070693 3300025905 Bacteria 1413
83 Ga0207699_10000618 3300025906 Bacteria 17312
84 Ga0207699_10022174 3300025906 Bacteria 3437
85 Ga0207699_10269720 3300025906 Bacteria 1179
86 Ga0207707_10000795 3300025912 Bacteria 30937
87 Ga0207707_10009705 3300025912 Bacteria 8350
88 Ga0207707_10187616 3300025912 Bacteria 1804
89 Ga0207707_10269627 3300025912 Bacteria 1475
90 Ga0207695_10043993 3300025913 Bacteria 4754
91 Ga0207695_10181966 3300025913 Bacteria 2023
92 Ga0207693_10005244 3300025915 Bacteria 10845
93 Ga0207693_10036309 3300025915 Bacteria 3885
94 Ga0207693_10047821 3300025915 Bacteria 3360
95 Ga0207693_10318798 3300025915 Bacteria 1217
96 Ga0207663_10019333 3300025916 Bacteria 3834
97 Ga0207663_10118481 3300025916 Bacteria 1809
98 Ga0207660_10026323 3300025917 Bacteria 3960
99 Ga0207652_10036391 3300025921 Bacteria 4161
100 Ga0207652_10042846 3300025921 Bacteria 3854
101 Ga0207652_10092995 3300025921 Bacteria 2653
102 Ga0207652_10095417 3300025921 Bacteria 2620
103 Ga0207650_10002309 3300025925 Bacteria 13285
104 Ga0207700_10051183 3300025928 Bacteria 3081
105 Ga0207644_10003035 3300025931 Bacteria 10799
106 Ga0207670_10130330 3300025936 Bacteria 1841
107 Ga0207665_10010892 3300025939 Bacteria 5969
108 Ga0207665_10083318 3300025939 Bacteria 2205
109 Ga0207691_10076001 3300025940 Bacteria 3027
110 Ga0207661_10000349 3300025944 Bacteria 29687
111 Ga0207661_10035505 3300025944 Bacteria 3885
112 Ga0207667_10037284 3300025949 Bacteria 5198
113 Ga0207667_10274030 3300025949 Bacteria 1725
114 Ga0207667_10589202 3300025949 Unclassified 1122
115 Ga0207702_10308408 3300026078 Bacteria 1504
116 Ga0207674_10033529 3300026116 Bacteria 5375
117 Ga0207683_10085345 3300026121 Bacteria 2806
118 Ga0207698_10306884 3300026142 Unclassified 1480
119 Ga0265340_10000523 3300031247 Bacteria 21161
120 Ga0265316_10088470 3300031344 Bacteria 2365
121 Ga0316579_10078250 3300031691 Bacteria 1572
122 Ga0316578_10000545 3300031728 Bacteria 12928
123 Ga0316578_10116382 3300031728 Bacteria 1606
124 Ga0316577_10000302 3300031733 Bacteria 17922
125 Ga0316577_10001762 3300031733 Bacteria 10423
126 Ga0373936_0011173 3300035113 Bacteria 3393
127 Ga0373957_0000352 3300035120 Bacteria 11706
128 Ga0373955_0054481 3300035172 Bacteria 2187
129 Ga0316574_0005047 3300035398 Bacteria 7010
130 Ga0373924_0016471 3300035410 Bacteria 2821
131 Ga0316582_0052913 3300036647 Bacteria 2582
132 Ga0316584_0005905 3300036712 Bacteria 8262
133 Ga0316584_0015882 3300036712 Bacteria 5393
134 Ga0316584_0045234 3300036712 Bacteria 3286
135 Ga0395900_0129760 3300037418 Bacteria 2584
136 Ga0395898_0028685 3300037466 Bacteria 5577
137 Ga0395898_0098380 3300037466 Bacteria 2809
138 Ga0395898_0283837 3300037466 Unclassified 1579
139 Ga0395898_0335313 3300037466 Bacteria 1442
140 Ga0395905_0213653 3300037471 Bacteria 1807
141 Ga0316581_0008667 3300037588 Bacteria 2776
142 Ga0395901_0409550 3300038443 Bacteria 1392
143 Ga0436365_0392043 3300039437 Bacteria 7324
144 Ga0436365_0419429 3300039437 Bacteria 1068
145 Ga0436362_0009644 3300039453 Bacteria 7519
146 Ga0466969_0129198 3300044656 Bacteria 1172
147 Ga0466965_0059955 3300044683 Bacteria 1900
148 Ga0466966_0001122 3300044684 Bacteria 17196
149 Ga0466961_0000683 3300044693 Bacteria 21416
150 Ga0466961_0248497 3300044693 Unclassified 1092
151 Ga0466964_0008124 3300044706 Bacteria 3937
152 Ga0466971_0125477 3300044719 Unclassified 1189
153 Ga0466957_0004232 3300044842 Bacteria 7957
154 Ga0466959_0000582 3300045049 Bacteria 21277
155 Ga0466959_0017702 3300045049 Bacteria 5227
156 Ga0466959_0320006 3300045049 Unclassified 1060
157 Ga0466967_0000315 3300045976 Bacteria 21895
158 Ga0495603_0038172 3300046455 Bacteria 2881
159 Ga0495603_0194038 3300046455 Bacteria 1174
160 Ga0495651_0053449 3300046462 Bacteria 3109
161 Ga0495632_0117850 3300046519 Bacteria 1243
162 Ga0495646_0087033 3300046680 Bacteria 1811
163 Ga0495669_0101898 3300046684 Bacteria 1334
164 Ga0496121_0083213 3300048924 Bacteria 2527
165 Ga0496121_0101983 3300048924 Bacteria 2212
166 Ga0496126_0001677 3300048929 Bacteria 33189
167 Ga0501074_0008145 3300049590 Bacteria 7596
168 Ga0501074_0210321 3300049590 Bacteria 1386
169 Ga0501075_0096843 3300049591 Bacteria 2239
170 Ga0501079_0035279 3300049741 Bacteria 3850
171 nmdc:mga03n38_80733_c1 3300050490 Bacteria 1528
172 nmdc:mga07m45_11877_c1 3300050496 Bacteria 4586
173 nmdc:mga0n895_512612_c1 3300050512 Bacteria 1207
174 Ga0495601_0264620 3300053077 Bacteria 1122
175 Ga0500572_001029 3300053111 Bacteria 8370
176 Ga0500639_129307 3300053163 Bacteria 1199
177 Ga0500596_005431 3300053735 Bacteria 2244
178 Ga0501084_0067990 3300054114 Bacteria 2983
179 Ga0501082_0503602 3300060353 Bacteria 1058
180 Ga0466962_0010080 3300061719 Bacteria 4533
181 Ga0466962_0071737 3300061719 Bacteria 1654
182 2513676611 2513237098 Bacteria 9902361
183 2524470389 2524023210 Bacteria 9029266
184 2885387852 2885383462 Bacteria 9473874
185 2891396279 2891395885 Bacteria 9251614
186 2903771886 2903768456 Bacteria 9749579
187 8056689259 8056681323 Bacteria 8472857
188 Ga0316576_10074053
189 JGI25404J52841_10007734
190 Ga0070670_100028330
191 Ga0070670_100234364
192 Ga0070670_100266137
193 Ga0070680_100025680
194 Ga0070680_100243400
195 Ga0070680_100371668
196 Ga0070680_100424762
197 Ga0070682_100149155
198 Ga0070689_100182312
199 Ga0070661_100592390
200 Ga0070709_10000406
201 Ga0070709_10006590
202 Ga0070709_10014513
203 Ga0070714_100239638
204 Ga0070714_100397673
205 Ga0070713_100130780
206 Ga0070711_100003409
207 Ga0070711_100006571
208 Ga0070711_100385344
209 Ga0070681_10010660
210 Ga0070681_10037675
211 Ga0070681_10122756
212 Ga0070679_100008045
213 Ga0070679_100123017
214 Ga0070684_100047398
215 Ga0070672_100065710
216 Ga0070665_100388554
217 Ga0068855_100013783
218 Ga0068855_100604521
219 Ga0068855_100715325
220 Ga0068857_100049715
221 Ga0068857_100382871
222 Ga0068856_100214916
223 Ga0068856_100349022
224 Ga0068870_10178059
225 Ga0068860_100000213
226 Ga0081455_10001795
227 Ga0081455_10034807
228 Ga0081455_10038714
229 Ga0081455_10126407
230 Ga0081540_1007492
231 Ga0081540_1015969
232 Ga0081540_1016844
233 Ga0081540_1017127
234 Ga0081540_1110193
235 Ga0081539_10000148
236 Ga0070717_10007106
237 Ga0070717_10294427
238 Ga0075363_100083744
239 Ga0070715_10042089
240 Ga0070716_100007779
241 Ga0070716_100140434
242 Ga0070712_100005474
243 Ga0070712_100044606
244 Ga0075433_10439585
245 Ga0075436_100262395
246 Ga0099795_10056961
247 Ga0105240_10013910
248 Ga0105240_10024872
249 Ga0105241_10387049
250 Ga0105241_10551166
251 Ga0105237_10572692
252 Ga0157373_10256136
253 Ga0157370_10073443
254 Ga0157370_10200375
255 Ga0157370_10268033
256 Ga0157369_10026168
257 Ga0157369_10080112
258 Ga0157369_10212521
259 Ga0157378_10582472
260 Ga0157372_10035591
261 Ga0157372_10445674
262 Ga0213876_10004510
263 Ga0209233_1003530
264 Ga0207692_10000175
265 Ga0207692_10023239
266 Ga0207692_10068177
267 Ga0207688_10186619
268 Ga0207685_10005132
269 Ga0207685_10070693
270 Ga0207699_10000618
271 Ga0207699_10022174
272 Ga0207699_10269720
273 Ga0207707_10000795
274 Ga0207707_10009705
275 Ga0207707_10187616
276 Ga0207707_10269627
277 Ga0207695_10043993
278 Ga0207695_10181966
279 Ga0207693_10005244
280 Ga0207693_10036309
281 Ga0207693_10047821
282 Ga0207693_10318798
283 Ga0207663_10019333
284 Ga0207663_10118481
285 Ga0207660_10026323
286 Ga0207652_10036391
287 Ga0207652_10042846
288 Ga0207652_10092995
289 Ga0207652_10095417
290 Ga0207650_10002309
291 Ga0207700_10051183
292 Ga0207644_10003035
293 Ga0207670_10130330
294 Ga0207665_10010892
295 Ga0207665_10083318
296 Ga0207691_10076001
297 Ga0207661_10000349
298 Ga0207661_10035505
299 Ga0207667_10037284
300 Ga0207667_10274030
301 Ga0207667_10589202
302 Ga0207702_10308408
303 Ga0207674_10033529
304 Ga0207683_10085345
305 Ga0207698_10306884
306 Ga0265340_10000523
307 Ga0265316_10088470
308 Ga0316579_10078250
309 Ga0316578_10000545
310 Ga0316578_10116382
311 Ga0316577_10000302
312 Ga0316577_10001762
313 Ga0373936_0011173
314 Ga0373957_0000352
315 Ga0373955_0054481
316 Ga0316574_0005047
317 Ga0373924_0016471
318 Ga0316582_0052913
319 Ga0316584_0005905
320 Ga0316584_0015882
321 Ga0316584_0045234
322 Ga0395900_0129760
323 Ga0395898_0028685
324 Ga0395898_0098380
325 Ga0395898_0283837
326 Ga0395898_0335313
327 Ga0395905_0213653
328 Ga0316581_0008667
329 Ga0395901_0409550
330 Ga0436365_0392043
331 Ga0436365_0419429
332 Ga0436362_0009644
333 Ga0466969_0129198
334 Ga0466965_0059955
335 Ga0466966_0001122
336 Ga0466961_0000683
337 Ga0466961_0248497
338 Ga0466964_0008124
339 Ga0466971_0125477
340 Ga0466957_0004232
341 Ga0466959_0000582
342 Ga0466959_0017702
343 Ga0466959_0320006
344 Ga0466967_0000315
345 Ga0495603_0038172
346 Ga0495603_0194038
347 Ga0495651_0053449
348 Ga0495632_0117850
349 Ga0495646_0087033
350 Ga0495669_0101898
351 Ga0496121_0083213
352 Ga0496121_0101983
353 Ga0496126_0001677
354 Ga0501074_0008145
355 Ga0501074_0210321
356 Ga0501075_0096843
357 Ga0501079_0035279
358 nmdc:mga03n38_80733_c1
359 nmdc:mga07m45_11877_c1
360 nmdc:mga0n895_512612_c1
361 Ga0495601_0264620
362 Ga0500572_001029
363 Ga0500639_129307
364 Ga0500596_005431
365 Ga0501084_0067990
366 Ga0501082_0503602
367 Ga0466962_0010080
368 Ga0466962_0071737
369 2513676611
370 2524470389
371 2885387852
372 2891396279
373 2903771886
374 8056689259

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00106

adh_short

short chain dehydrogenase

52

256

0.92

PF08659

KR

KR domain

53

151

0.91

PF13561

adh_short_C2

Enoyl-(Acyl carrier protein) reductase

58

277

0.85

PF01370

Epimerase

NAD dependent epimerase/dehydratase family

54

244

0.77

Structural Annotation

Top 5 Hits

ID Description Score Start End
7jk9-assembly1.cif.gz_A helical filaments of plant light-dependent protochlorophyllide oxidoreductase (lpor) bound to nadph, pchlide, and membrane 0.9056 4 273
7jk9-assembly1.cif.gz_A helical filaments of plant light-dependent protochlorophyllide oxidoreductase (lpor) bound to nadph, pchlide, and membrane 0.893 4 273
6l1h-assembly1.cif.gz_A crystal structure of light-dependent protochlorophyllide oxidoreductase from thermosynechococcus elongatus 0.8676 5 272
6rnv-assembly1.cif.gz_A the crystal structure of thermosynechococcus elongatus protochlorophyllide oxidoreductase (por) 0.8669 5 273
6rnv-assembly1.cif.gz_A the crystal structure of thermosynechococcus elongatus protochlorophyllide oxidoreductase (por) 0.8608 5 273
ID Description Score Start End Superfamily
af_Q9W404_65_353_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9327 3 272 3.40.50.720
af_Q8RWK2_22_326_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9279 1 271 3.40.50.720
af_Q9VE80_46_330_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9208 1 273 3.40.50.720
af_Q9XVS9_38_332_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.92 1 273 3.40.50.720
af_Q9W404_65_353_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9194 3 272 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A0R3LJM9-F1-model_v4 3-oxoacyl-ACP reductase 0.9989 1 273 GO:0016491
AF-A0A3D2T1L7-F1-model_v4 3-oxoacyl-ACP reductase 0.9982 108 273 GO:0016491
AF-A0A537M3C3-F1-model_v4 SDR family NAD(P)-dependent oxidoreductase 0.9978 85 273 GO:0016491
AF-A0A0R3LJM9-F1-model_v4 3-oxoacyl-ACP reductase 0.9953 1 273 GO:0016491
AF-A0A434S3H7-F1-model_v4 SDR family NAD(P)-dependent oxidoreductase 0.9935 105 273 GO:0016491

Map