F287768

General Info

Members Datasets Scaffolds Average Seq Length
187 147 172 532

Family's Representative Sequence

Representative Sequence 3300025914|Ga0207671_10050908|Ga0207671_100509083
Length 554
Sequence MGGIYTSCLVERFRSTLTSMPVIASKLNTRSADFQANAAAMTELVADLRAKVEVISQGGGDAAREKHLARGKLLPRDRVRTLLDVGSPFLELSQLAAWNMYDNQVPAAGLITGIGRVAGRECMIVANDATVKGGTYFPMTVKKHLRAQEIAQQNYLPCIYLVDSGGANLPNQDEVFPDREHFGRIFYNQANMSALGIPQIAVVMGSCTAGGAYVPAMSDETIIVKNQGTIFLAGPPLVKAAIGEIVTAEELGGADVHARTSGVADHYALNDVHALQMAQRIVTHLNRQKLLSLELKAVREPLLDPAELHGVVPTDARKPYDVREIIARVVDGSELDEFKPLYGTTLVCGFAHIYGYPVGIVANNGILFSESALKGAHFIELCSQRGIPLVFLQNITGFMVGKKYEALGIAKDGAKMVTAVASSKVPKFTIIVGGSFGAGNYGMCGRAYSPRFLWMWPNARISVMGGEQAASVLATVRRDGIEKQGKAWTKEEEEAFKRPIREQYEVQGHPYYASARLWDDGVIDPTETRRVLGLGLSASLNAPIEKTTFGVFRM

Samples

Sample ID Description Type Environment
1 2511231221 Azospirillum lipoferum 4B Isolate Rhizosphere
2 2522572158 Azospirillum halopraeferens DSM 3675 Isolate Unclassified
3 2585428058 Methylibium sp. CF468 Isolate Rhizosphere
4 2597490356 Azospirillum brasilense sp7 Isolate Unclassified
5 2643221592 Rhizobacter sp. Root16D2 Isolate Unclassified
6 2643221625 Rhizobacter sp. Root29 Isolate Unclassified
7 2643221648 Rhizobacter sp. Root1238 Isolate Unclassified
8 2775507049 Rhizobium sp. ACO-34A Isolate Unclassified
9 2834578030 Paracoccus thiocyanatus SST Isolate Unclassified
10 2842333319 Skermanella aerolata SEMIA 4010 Isolate Nodule
11 2846952575 Azospirillum brasilense sp7 Isolate Unclassified
12 2848858292 Azospirillum brasilense Az39 Isolate Unclassified
13 2897803580 Azospirillum doebereinerae GSF71 Isolate Unclassified
14 2899275550 Paracoccus hibiscisoli CCTCC AB2016182 Isolate Rhizosphere
15 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
16 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
17 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
18 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
19 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
20 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
21 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
22 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
23 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
24 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
25 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
26 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
27 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
28 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
29 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
30 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
31 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
32 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
33 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
34 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
35 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
36 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
37 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
38 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
39 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
40 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
41 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
42 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
43 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
44 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
45 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
46 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
47 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
48 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
49 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
50 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
51 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
52 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
72 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
73 3300030745 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 8 Metagenome Rhizosphere
74 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
75 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
76 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
77 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
78 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
79 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
80 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
81 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
82 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
83 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
84 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
85 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
86 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
87 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
88 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
89 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
90 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
91 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
92 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
93 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
94 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
95 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
96 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
97 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
98 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
99 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
100 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
101 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
102 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
103 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
104 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
105 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
106 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
107 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
108 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
109 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
110 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
111 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
112 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
113 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
114 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
115 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
116 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
117 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
118 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
119 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
120 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
121 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
122 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
123 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
124 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
125 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
126 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
127 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
128 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
130 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
131 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
132 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
133 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
134 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
135 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
136 3300049649 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J5_A_0_drought Metagenome Rhizosphere
137 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
138 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
139 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
140 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
141 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
142 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
143 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
144 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
145 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
146 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
147 8054002106 Azospirillum lipoferum 59b Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 91.98
Metatranscriptomes 0
Isolates 8.02

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.88
Nodule 0.53
Rhizoplane 5.35
Rhizosphere 77.01
Stem 0
Stem Tuber 0
Unclassified 11.23

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0055530_10014848 3300003791 Bacteria 2573
2 Ga0070670_100003551 3300005331 Bacteria 12975
3 Ga0070670_100032022 3300005331 Bacteria 4528
4 Ga0070680_100013938 3300005336 Bacteria 6273
5 Ga0068868_100139157 3300005338 Bacteria 1991
6 Ga0070675_100015035 3300005354 Bacteria 6113
7 Ga0070667_100027297 3300005367 Bacteria 4750
8 Ga0070713_100008635 3300005436 Bacteria 7240
9 Ga0070711_100009026 3300005439 Bacteria 6122
10 Ga0070700_100030933 3300005441 Bacteria 3203
11 Ga0070678_100061343 3300005456 Bacteria 2771
12 Ga0070681_10006123 3300005458 Bacteria 11677
13 Ga0070681_10006980 3300005458 Bacteria 10991
14 Ga0070706_100008496 3300005467 Bacteria 9569
15 Ga0070707_100011176 3300005468 Bacteria 8367
16 Ga0070698_100001171 3300005471 Bacteria 29108
17 Ga0070697_100093045 3300005536 Bacteria 2496
18 Ga0070672_100015258 3300005543 Bacteria 5464
19 Ga0070704_100101017 3300005549 Bacteria 2173
20 Ga0068856_100046817 3300005614 Bacteria 4260
21 Ga0068859_100074812 3300005617 Bacteria 3426
22 Ga0081455_10004499 3300005937 Bacteria 15590
23 Ga0081455_10014604 3300005937 Bacteria 7685
24 Ga0081539_10000016 3300005985 Bacteria 381648
25 Ga0081539_10003351 3300005985 Bacteria 19892
26 Ga0075367_10011043 3300006178 Bacteria 4764
27 Ga0075366_10055511 3300006195 Bacteria 2353
28 Ga0075428_100099482 3300006844 Bacteria 3171
29 Ga0075434_100090591 3300006871 Bacteria 3060
30 Ga0097620_100074805 3300006931 Bacteria 3426
31 Ga0105240_10002551 3300009093 Bacteria 29190
32 Ga0114129_10017797 3300009147 Bacteria 10119
33 Ga0105243_10031053 3300009148 Bacteria 4118
34 Ga0105241_10033250 3300009174 Bacteria 3870
35 Ga0105237_10014396 3300009545 Bacteria 8273
36 Ga0105239_10045427 3300010375 Bacteria 4814
37 Ga0157375_10000588 3300013308 Bacteria 32287
38 Ga0213875_10000580 3300021388 Bacteria 29736
39 Ga0213875_10002770 3300021388 Bacteria 10348
40 Ga0209675_1001233 3300025291 Bacteria 15391
41 Ga0209676_1000089 3300025292 Bacteria 260196
42 Ga0209050_1001413 3300025298 Bacteria 25973
43 Ga0207684_10000805 3300025910 Bacteria 36260
44 Ga0207684_10140330 3300025910 Bacteria 2077
45 Ga0207707_10011153 3300025912 Bacteria 7818
46 Ga0207707_10027026 3300025912 Bacteria 5016
47 Ga0207695_10134854 3300025913 Bacteria 2423
48 Ga0207671_10050908 3300025914 Bacteria 3067
49 Ga0207693_10011509 3300025915 Bacteria 7155
50 Ga0207660_10028810 3300025917 Bacteria 3802
51 Ga0207649_10085971 3300025920 Bacteria 2048
52 Ga0207652_10024804 3300025921 Bacteria 4977
53 Ga0207652_10097063 3300025921 Bacteria 2597
54 Ga0207646_10008770 3300025922 Bacteria 10092
55 Ga0207664_10020866 3300025929 Bacteria 4862
56 Ga0207644_10037219 3300025931 Bacteria 3422
57 Ga0207665_10001744 3300025939 Bacteria 14600
58 Ga0207691_10003656 3300025940 Bacteria 14921
59 Ga0207689_10005711 3300025942 Bacteria 11065
60 Ga0207689_10019505 3300025942 Bacteria 5714
61 Ga0207667_10036535 3300025949 Bacteria 5264
62 Ga0207677_10066416 3300026023 Bacteria 2522
63 Ga0207648_10006265 3300026089 Bacteria 11842
64 Ga0207674_10004884 3300026116 Bacteria 16046
65 Ga0207674_10017047 3300026116 Bacteria 7929
66 Ga0207675_100034360 3300026118 Bacteria 4727
67 Ga0265334_10012544 3300028573 Bacteria 3559
68 Ga0307515_10000121 3300028794 Bacteria 188657
69 Ga0307515_10032551 3300028794 Bacteria 8631
70 Ga0316182_1059973 3300030745 Bacteria 3038
71 Ga0265330_10004370 3300031235 Bacteria 7178
72 Ga0265332_10000005 3300031238 Bacteria 377525
73 Ga0265332_10001838 3300031238 Bacteria 11317
74 Ga0265328_10001868 3300031239 Bacteria 9584
75 Ga0265328_10004275 3300031239 Bacteria 6213
76 Ga0265320_10016793 3300031240 Bacteria 4086
77 Ga0265325_10016152 3300031241 Bacteria 4177
78 Ga0265329_10004049 3300031242 Bacteria 6229
79 Ga0265331_10000989 3300031250 Bacteria 22372
80 Ga0265327_10000877 3300031251 Bacteria 44444
81 Ga0265316_10018487 3300031344 Bacteria 5987
82 Ga0265314_10006592 3300031711 Bacteria 10228
83 Ga0265342_10038829 3300031712 Bacteria 2897
84 Ga0316578_10006427 3300031728 Bacteria 5800
85 Ga0316577_10003047 3300031733 Bacteria 8411
86 Ga0307410_10042122 3300031852 Bacteria 3016
87 Ga0307416_100042447 3300032002 Bacteria 3551
88 Ga0307416_100219916 3300032002 Bacteria 1820
89 Ga0307415_100034072 3300032126 Bacteria 3311
90 Ga0307415_100140043 3300032126 Bacteria 1846
91 Ga0307510_10000187 3300033180 Bacteria 53246
92 Ga0373934_0050211 3300035086 Bacteria 1653
93 Ga0316582_0007651 3300036647 Bacteria 5765
94 Ga0316582_0010065 3300036647 Bacteria 5164
95 Ga0316584_0008022 3300036712 Bacteria 7250
96 Ga0395899_0018615 3300037312 Bacteria 5278
97 Ga0395899_0040220 3300037312 Bacteria 3497
98 Ga0395900_0006691 3300037418 Bacteria 11976
99 Ga0395898_0101325 3300037466 Bacteria 2765
100 Ga0395905_0000086 3300037471 Bacteria 153641
101 Ga0395905_0001996 3300037471 Bacteria 23316
102 Ga0395905_0048990 3300037471 Bacteria 3958
103 Ga0436364_0388279 3300037853 Bacteria 8709
104 Ga0436364_0593153 3300037853 Bacteria 9662
105 Ga0436364_1396310 3300037853 Bacteria 9105
106 Ga0395901_0003649 3300038443 Bacteria 15519
107 Ga0395901_0011479 3300038443 Bacteria 8977
108 Ga0395901_0013967 3300038443 Bacteria 8172
109 Ga0395901_0105086 3300038443 Bacteria 2964
110 Ga0400483_131403 3300039062 Bacteria 3739
111 Ga0436365_1371307 3300039437 Bacteria 6558
112 Ga0436360_0122074 3300039438 Bacteria 5948
113 Ga0436360_1112371 3300039438 Bacteria 1917
114 Ga0436362_0841322 3300039453 Bacteria 1884
115 Ga0451577_0000629 3300042876 Bacteria 56480
116 Ga0451577_0050876 3300042876 Bacteria 3698
117 Ga0466964_0025999 3300044706 Bacteria 2289
118 Ga0453684_0000242 3300044712 Bacteria 234895
119 Ga0453684_0001380 3300044712 Bacteria 70319
120 Ga0453684_0093555 3300044712 Bacteria 3702
121 Ga0451576_0000857 3300045051 Bacteria 58872
122 Ga0451576_0124708 3300045051 Bacteria 2683
123 Ga0466967_0028414 3300045976 Bacteria 4668
124 Ga0495638_0022560 3300046460 Bacteria 4131
125 Ga0495644_0026852 3300046523 Bacteria 2183
126 Ga0495659_0003113 3300046664 Bacteria 5326
127 Ga0495676_0054339 3300047321 Bacteria 3185
128 Ga0496104_0000999 3300048907 Bacteria 24185
129 Ga0496105_0000290 3300048908 Bacteria 33077
130 Ga0496108_0006831 3300048911 Bacteria 9234
131 Ga0496109_0003712 3300048912 Bacteria 12758
132 Ga0496110_0009510 3300048913 Bacteria 7866
133 Ga0496110_0025951 3300048913 Bacteria 5009
134 Ga0496110_0153199 3300048913 Bacteria 2087
135 Ga0496111_0030695 3300048914 Bacteria 3822
136 Ga0496112_0027533 3300048915 Bacteria 5480
137 Ga0496113_0001509 3300048916 Bacteria 13039
138 Ga0501033_0027938 3300049570 Bacteria 4241
139 Ga0501034_0000363 3300049571 Bacteria 77256
140 Ga0501034_0006395 3300049571 Bacteria 12687
141 Ga0501034_0012214 3300049571 Bacteria 8879
142 Ga0501036_0107613 3300049572 Bacteria 2357
143 Ga0501038_0070471 3300049574 Bacteria 2968
144 Ga0501039_0032327 3300049575 Bacteria 4033
145 Ga0501040_0000035 3300049576 Bacteria 62891
146 Ga0501042_0026139 3300049578 Bacteria 4103
147 Ga0501043_0000049 3300049579 Bacteria 107569
148 Ga0501046_0000120 3300049580 Bacteria 83103
149 Ga0501046_0015922 3300049580 Bacteria 6306
150 Ga0501047_0000106 3300049581 Bacteria 102213
151 Ga0501071_0009456 3300049587 Bacteria 6492
152 Ga0501072_0001743 3300049588 Bacteria 16185
153 Ga0501072_0006945 3300049588 Bacteria 8594
154 Ga0501075_0001086 3300049591 Bacteria 17489
155 Ga0501075_0038424 3300049591 Bacteria 3578
156 Ga0501076_0040526 3300049592 Bacteria 3661
157 Ga0501076_0047104 3300049592 Bacteria 3407
158 Ga0501077_0019250 3300049593 Bacteria 4317
159 Ga0501198_000016 3300049649 Bacteria 102263
160 Ga0501079_0005673 3300049741 Bacteria 9319
161 Ga0501079_0007574 3300049741 Bacteria 8222
162 Ga0501080_0044999 3300049742 Bacteria 4108
163 Ga0501045_0030713 3300049824 Bacteria 3889
164 nmdc:mga0yw44_29177_c1 3300050492 Bacteria 3183
165 nmdc:mga0k408_56058_c1 3300050493 Bacteria 2286
166 nmdc:mga0sz30_964_c1 3300050516 Bacteria 10317
167 Ga0500643_001577 3300053087 Bacteria 12908
168 Ga0500641_0002870 3300053096 Bacteria 6112
169 Ga0501084_0118203 3300054114 Bacteria 2228
170 Ga0530510_0004108 3300061734 Bacteria 10047
171 Ga0530510_0007072 3300061734 Bacteria 7809
172 Ga0530510_0036021 3300061734 Bacteria 3567

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300035086 Ga0373934_0050211 Ga0373934_0050211_20_1387 455
2 3300030745 Ga0316182_1059973 Ga0316182_10599732 485
3 3300049571 Ga0501034_0012214 Ga0501034_0012214_4800_6329 498
4 3300009147 Ga0114129_10017797 Ga0114129_100177974 501
5 3300031238 Ga0265332_10000005 Ga0265332_10000005253 502
6 3300031251 Ga0265327_10000877 Ga0265327_100008773 504
7 3300037471 Ga0395905_0000086 Ga0395905_0000086_18859_20481 508
8 3300032002 Ga0307416_100042447 Ga0307416_1000424473 510
9 3300032126 Ga0307415_100034072 Ga0307415_1000340722 510
10 3300048915 Ga0496112_0027533 Ga0496112_0027533_326_1858 510
11 3300031239 Ga0265328_10001868 Ga0265328_100018686 511
12 3300044712 Ga0453684_0093555 Ga0453684_0093555_618_2228 511
13 3300005985 Ga0081539_10000016 Ga0081539_10000016214 514
14 3300021388 Ga0213875_10000580 Ga0213875_1000058022 514
15 3300048913 Ga0496110_0153199 Ga0496110_0153199_264_1877 518
16 3300049571 Ga0501034_0000363 Ga0501034_0000363_51936_53519 518
17 3300049570 Ga0501033_0027938 Ga0501033_0027938_1907_3469 519
18 3300049578 Ga0501042_0026139 Ga0501042_0026139_951_2513 519
19 3300049587 Ga0501071_0009456 Ga0501071_0009456_4552_6114 519
20 3300049588 Ga0501072_0001743 Ga0501072_0001743_7599_9161 519
21 3300049591 Ga0501075_0001086 Ga0501075_0001086_15234_16796 519
22 3300049592 Ga0501076_0040526 Ga0501076_0040526_1728_3290 519
23 3300049741 Ga0501079_0007574 Ga0501079_0007574_6044_7606 519
24 3300049824 Ga0501045_0030713 Ga0501045_0030713_507_2069 519
25 3300061734 Ga0530510_0007072 Ga0530510_0007072_774_2336 519
26 3300006195 Ga0075366_10055511 Ga0075366_100555112 521
27 3300050493 nmdc:mga0k408_56058_c1 nmdc:mga0k408_56058_c1_378_1994 521
28 3300032126 Ga0307415_100140043 Ga0307415_1001400432 529
29 3300042876 Ga0451577_0050876 Ga0451577_0050876_1763_3373 529
30 3300045051 Ga0451576_0124708 Ga0451576_0124708_1021_2631 529
31 iso_pu_bacteria 2775507049 2776914986 529
32 iso_pu_bacteria 2834578030 2834579222 530
33 iso_pu_bacteria 2899275550 2899277609 530
34 3300039453 Ga0436362_0841322 Ga0436362_0841322_112_1719 531
35 iso_pu_bacteria 2511231221 2512035914 531
36 iso_pu_bacteria 2522572158 2523107652 531
37 iso_pu_bacteria 2585428058 2587735202 531
38 iso_pu_bacteria 2597490356 2599103694 531
39 iso_pu_bacteria 2643221592 2643972179 531
40 iso_pu_bacteria 2643221625 2644141710 531
41 iso_pu_bacteria 2643221648 2644275519 531
42 iso_pu_bacteria 2842333319 2842339049 531
43 iso_pu_bacteria 2846952575 2846957378 531
44 iso_pu_bacteria 2848858292 2848863297 531
45 iso_pu_bacteria 2897803580 2897807202 531
46 iso_pu_bacteria 8054002106 8054002628 531
47 3300028794 Ga0307515_10000121 Ga0307515_1000012170 533
48 3300037471 Ga0395905_0048990 Ga0395905_0048990_2156_3757 533
49 3300046460 Ga0495638_0022560 Ga0495638_0022560_1152_2753 533
50 3300049572 Ga0501036_0107613 Ga0501036_0107613_423_2027 533
51 3300049574 Ga0501038_0070471 Ga0501038_0070471_408_2012 533
52 3300049575 Ga0501039_0032327 Ga0501039_0032327_1774_3378 533
53 3300049580 Ga0501046_0015922 Ga0501046_0015922_1190_2794 533
54 3300049588 Ga0501072_0006945 Ga0501072_0006945_2287_3891 533
55 3300049591 Ga0501075_0038424 Ga0501075_0038424_1229_2833 533
56 3300049592 Ga0501076_0047104 Ga0501076_0047104_29_1633 533
57 3300049741 Ga0501079_0005673 Ga0501079_0005673_1139_2743 533
58 3300049742 Ga0501080_0044999 Ga0501080_0044999_2402_4006 533
59 3300054114 Ga0501084_0118203 Ga0501084_0118203_459_2063 533
60 3300061734 Ga0530510_0004108 Ga0530510_0004108_5612_7216 533
61 3300003791 Ga0055530_10014848 Ga0055530_100148481 535
62 3300005331 Ga0070670_100003551 Ga0070670_10000355114 535
63 3300005331 Ga0070670_100032022 Ga0070670_1000320223 535
64 3300005336 Ga0070680_100013938 Ga0070680_1000139384 535
65 3300005338 Ga0068868_100139157 Ga0068868_1001391572 535
66 3300005354 Ga0070675_100015035 Ga0070675_1000150352 535
67 3300005367 Ga0070667_100027297 Ga0070667_1000272973 535
68 3300005436 Ga0070713_100008635 Ga0070713_1000086356 535
69 3300005439 Ga0070711_100009026 Ga0070711_1000090262 535
70 3300005441 Ga0070700_100030933 Ga0070700_1000309332 535
71 3300005456 Ga0070678_100061343 Ga0070678_1000613432 535
72 3300005458 Ga0070681_10006123 Ga0070681_100061238 535
73 3300005458 Ga0070681_10006980 Ga0070681_100069808 535
74 3300005467 Ga0070706_100008496 Ga0070706_1000084968 535
75 3300005468 Ga0070707_100011176 Ga0070707_1000111762 535
76 3300005471 Ga0070698_100001171 Ga0070698_1000011713 535
77 3300005536 Ga0070697_100093045 Ga0070697_1000930452 535
78 3300005543 Ga0070672_100015258 Ga0070672_1000152584 535
79 3300005549 Ga0070704_100101017 Ga0070704_1001010171 535
80 3300005614 Ga0068856_100046817 Ga0068856_1000468173 535
81 3300005617 Ga0068859_100074812 Ga0068859_1000748124 535
82 3300005937 Ga0081455_10004499 Ga0081455_1000449911 535
83 3300005937 Ga0081455_10014604 Ga0081455_100146044 535
84 3300005985 Ga0081539_10003351 Ga0081539_1000335115 535
85 3300006178 Ga0075367_10011043 Ga0075367_100110435 535
86 3300006844 Ga0075428_100099482 Ga0075428_1000994822 535
87 3300006871 Ga0075434_100090591 Ga0075434_1000905912 535
88 3300006931 Ga0097620_100074805 Ga0097620_1000748054 535
89 3300009093 Ga0105240_10002551 Ga0105240_100025518 535
90 3300009148 Ga0105243_10031053 Ga0105243_100310534 535
91 3300009174 Ga0105241_10033250 Ga0105241_100332503 535
92 3300009545 Ga0105237_10014396 Ga0105237_100143965 535
93 3300010375 Ga0105239_10045427 Ga0105239_100454272 535
94 3300013308 Ga0157375_10000588 Ga0157375_100005885 535
95 3300021388 Ga0213875_10002770 Ga0213875_100027706 535
96 3300025291 Ga0209675_1001233 Ga0209675_10012336 535
97 3300025292 Ga0209676_1000089 Ga0209676_100008918 535
98 3300025298 Ga0209050_1001413 Ga0209050_10014133 535
99 3300025910 Ga0207684_10000805 Ga0207684_1000080534 535
100 3300025910 Ga0207684_10140330 Ga0207684_101403302 535
101 3300025912 Ga0207707_10011153 Ga0207707_100111537 535
102 3300025912 Ga0207707_10027026 Ga0207707_100270261 535
103 3300025913 Ga0207695_10134854 Ga0207695_101348541 535
104 3300025914 Ga0207671_10050908 Ga0207671_100509083 535
105 3300025915 Ga0207693_10011509 Ga0207693_100115094 535
106 3300025917 Ga0207660_10028810 Ga0207660_100288103 535
107 3300025920 Ga0207649_10085971 Ga0207649_100859711 535
108 3300025921 Ga0207652_10024804 Ga0207652_100248043 535
109 3300025921 Ga0207652_10097063 Ga0207652_100970632 535
110 3300025922 Ga0207646_10008770 Ga0207646_1000877011 535
111 3300025929 Ga0207664_10020866 Ga0207664_100208663 535
112 3300025931 Ga0207644_10037219 Ga0207644_100372192 535
113 3300025939 Ga0207665_10001744 Ga0207665_100017448 535
114 3300025940 Ga0207691_10003656 Ga0207691_100036569 535
115 3300025942 Ga0207689_10005711 Ga0207689_100057112 535
116 3300025942 Ga0207689_10019505 Ga0207689_100195054 535
117 3300025949 Ga0207667_10036535 Ga0207667_100365354 535
118 3300026023 Ga0207677_10066416 Ga0207677_100664162 535
119 3300026089 Ga0207648_10006265 Ga0207648_100062653 535
120 3300026116 Ga0207674_10004884 Ga0207674_100048846 535
121 3300026116 Ga0207674_10017047 Ga0207674_100170477 535
122 3300026118 Ga0207675_100034360 Ga0207675_1000343606 535
123 3300028573 Ga0265334_10012544 Ga0265334_100125442 535
124 3300028794 Ga0307515_10032551 Ga0307515_100325513 535
125 3300031235 Ga0265330_10004370 Ga0265330_100043706 535
126 3300031238 Ga0265332_10001838 Ga0265332_100018386 535
127 3300031239 Ga0265328_10004275 Ga0265328_100042756 535
128 3300031240 Ga0265320_10016793 Ga0265320_100167934 535
129 3300031241 Ga0265325_10016152 Ga0265325_100161522 535
130 3300031242 Ga0265329_10004049 Ga0265329_100040492 535
131 3300031250 Ga0265331_10000989 Ga0265331_1000098925 535
132 3300031344 Ga0265316_10018487 Ga0265316_100184876 535
133 3300031711 Ga0265314_10006592 Ga0265314_100065926 535
134 3300031712 Ga0265342_10038829 Ga0265342_100388292 535
135 3300031728 Ga0316578_10006427 Ga0316578_100064271 535
136 3300031733 Ga0316577_10003047 Ga0316577_100030474 535
137 3300031852 Ga0307410_10042122 Ga0307410_100421222 535
138 3300032002 Ga0307416_100219916 Ga0307416_1002199161 535
139 3300033180 Ga0307510_10000187 Ga0307510_1000018734 535
140 3300036647 Ga0316582_0007651 Ga0316582_0007651_3487_5094 535
141 3300036647 Ga0316582_0010065 Ga0316582_0010065_326_1933 535
142 3300036712 Ga0316584_0008022 Ga0316584_0008022_2936_4543 535
143 3300037312 Ga0395899_0018615 Ga0395899_0018615_1743_3350 535
144 3300037312 Ga0395899_0040220 Ga0395899_0040220_1250_2857 535
145 3300037418 Ga0395900_0006691 Ga0395900_0006691_3042_4649 535
146 3300037466 Ga0395898_0101325 Ga0395898_0101325_435_2042 535
147 3300037471 Ga0395905_0001996 Ga0395905_0001996_7677_9284 535
148 3300037853 Ga0436364_0388279 Ga0436364_0388279_2579_4186 535
149 3300037853 Ga0436364_0593153 Ga0436364_0593153_2821_4428 535
150 3300037853 Ga0436364_1396310 Ga0436364_1396310_4983_6590 535
151 3300038443 Ga0395901_0003649 Ga0395901_0003649_23_1630 535
152 3300038443 Ga0395901_0011479 Ga0395901_0011479_125_1732 535
153 3300038443 Ga0395901_0013967 Ga0395901_0013967_3089_4696 535
154 3300038443 Ga0395901_0105086 Ga0395901_0105086_1109_2716 535
155 3300039062 Ga0400483_131403 Ga0400483_131403_2077_3684 535
156 3300039437 Ga0436365_1371307 Ga0436365_1371307_2989_4614 535
157 3300039438 Ga0436360_0122074 Ga0436360_0122074_1368_2975 535
158 3300039438 Ga0436360_1112371 Ga0436360_1112371_135_1742 535
159 3300042876 Ga0451577_0000629 Ga0451577_0000629_53697_55304 535
160 3300044706 Ga0466964_0025999 Ga0466964_0025999_508_2115 535
161 3300044712 Ga0453684_0000242 Ga0453684_0000242_228102_229709 535
162 3300044712 Ga0453684_0001380 Ga0453684_0001380_58118_59725 535
163 3300045051 Ga0451576_0000857 Ga0451576_0000857_32646_34253 535
164 3300045976 Ga0466967_0028414 Ga0466967_0028414_2509_4116 535
165 3300046523 Ga0495644_0026852 Ga0495644_0026852_367_1974 535
166 3300046664 Ga0495659_0003113 Ga0495659_0003113_1537_3144 535
167 3300047321 Ga0495676_0054339 Ga0495676_0054339_616_2223 535
168 3300048907 Ga0496104_0000999 Ga0496104_0000999_13438_15045 535
169 3300048908 Ga0496105_0000290 Ga0496105_0000290_21418_23025 535
170 3300048911 Ga0496108_0006831 Ga0496108_0006831_7047_8654 535
171 3300048912 Ga0496109_0003712 Ga0496109_0003712_2026_3633 535
172 3300048913 Ga0496110_0009510 Ga0496110_0009510_709_2316 535
173 3300048913 Ga0496110_0025951 Ga0496110_0025951_197_1804 535
174 3300048914 Ga0496111_0030695 Ga0496111_0030695_1994_3601 535
175 3300048916 Ga0496113_0001509 Ga0496113_0001509_11211_12818 535
176 3300049571 Ga0501034_0006395 Ga0501034_0006395_494_2101 535
177 3300049576 Ga0501040_0000035 Ga0501040_0000035_14707_16314 535
178 3300049579 Ga0501043_0000049 Ga0501043_0000049_68027_69634 535
179 3300049580 Ga0501046_0000120 Ga0501046_0000120_13469_15076 535
180 3300049581 Ga0501047_0000106 Ga0501047_0000106_62095_63702 535
181 3300049593 Ga0501077_0019250 Ga0501077_0019250_1828_3435 535
182 3300049649 Ga0501198_000016 Ga0501198_000016_82564_84171 535
183 3300050492 nmdc:mga0yw44_29177_c1 nmdc:mga0yw44_29177_c1_1396_3003 535
184 3300050516 nmdc:mga0sz30_964_c1 nmdc:mga0sz30_964_c1_1282_2889 535
185 3300053087 Ga0500643_001577 Ga0500643_001577_11185_12792 535
186 3300053096 Ga0500641_0002870 Ga0500641_0002870_2080_3687 535
187 3300061734 Ga0530510_0036021 Ga0530510_0036021_1887_3494 535

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01039

Carboxyl_trans

Carboxyl transferase domain

66

552

0.95

PF03255

ACCA

Acetyl co-enzyme A carboxylase carboxyltransferase-like

100

242

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
3u9t-assembly1.cif.gz_B crystal structure of p. aeruginosa 3-methylcrotonyl-coa carboxylase (mcc) 750 kd holoenzyme, free enzyme 0.9804 2 535
3u9t-assembly1.cif.gz_B crystal structure of p. aeruginosa 3-methylcrotonyl-coa carboxylase (mcc) 750 kd holoenzyme, free enzyme 0.9782 2 535
4q0g-assembly1.cif.gz_B-2 crystal structure of beta subunit of acyl-coa carboxylase accd1 from mycobacterium tuberculosis 0.9722 18 535
3u9s-assembly1.cif.gz_L crystal structure of p. aeruginosa 3-methylcrotonyl-coa carboxylase (mcc) 750 kd holoenzyme, coa complex 0.9697 3 535
4q0g-assembly1.cif.gz_B-2 crystal structure of beta subunit of acyl-coa carboxylase accd1 from mycobacterium tuberculosis 0.9685 18 535
ID Description Score Start End Superfamily
3u9tB02 Alpha Beta;Alpha-Beta Complex;2-enoyl-CoA Hydratase; Chain A, domain 1;2-enoyl-CoA Hydratase; Chain A, domain 1 0.9652 38 269 3.90.226.10
af_Q9XUC3_1361_1542_3.90.226.10 Alpha Beta;Alpha-Beta Complex;2-enoyl-CoA Hydratase; Chain A, domain 1;2-enoyl-CoA Hydratase; Chain A, domain 1 0.9591 309 412 3.90.226.10
af_O86318_1_265_3.90.226.10 Alpha Beta;Alpha-Beta Complex;2-enoyl-CoA Hydratase; Chain A, domain 1;2-enoyl-CoA Hydratase; Chain A, domain 1 0.9572 4 271 3.90.226.10
3u9tB02 Alpha Beta;Alpha-Beta Complex;2-enoyl-CoA Hydratase; Chain A, domain 1;2-enoyl-CoA Hydratase; Chain A, domain 1 0.9556 38 269 3.90.226.10
af_A4HUX0_21_275_3.90.226.10 Alpha Beta;Alpha-Beta Complex;2-enoyl-CoA Hydratase; Chain A, domain 1;2-enoyl-CoA Hydratase; Chain A, domain 1 0.9548 44 267 3.90.226.10
ID Description Score Start End GO Terms
AF-A0A3B9BPN7-F1-model_v4 Methylcrotonoyl-CoA carboxylase 1.004 36 138 GO:0004485
GO:0006552
GO:1905202
AF-A0A7S3K813-F1-model_v4 methylcrotonoyl-CoA carboxylase (EC 6.4.1.4) (3-methylcrotonyl-CoA carboxylase 2) (3-methylcrotonyl-CoA:carbon dioxide ligase subunit beta) 0.9957 86 196 GO:0004485
GO:0005739
GO:0006552
GO:1905202
AF-A0A7J4T1D6-F1-model_v4 Methylcrotonoyl-CoA carboxylase 0.9946 278 418 GO:0004485
GO:0006552
GO:1905202
AF-A0A2W5PZL7-F1-model_v4 deleted 0.994 1 139
AF-A0A6V8CZJ5-F1-model_v4 Methylcrotonoyl-CoA carboxylase 0.9937 1 202 GO:0004485
GO:0006552
GO:1905202

Feature Viewer

pLDDT pTM Quality
89.82 0.91 High
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Predicted Structure (AlphaFold2)

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