F287387

General Info

Members Datasets Scaffolds Average Seq Length
187 118 374 698

Family's Representative Sequence

Representative Sequence 3300005840|Ga0068870_10015462|Ga0068870_100154622
Length 768
Sequence VTRSLGLTCGIACLVLVSVPCAAEQDHKKWSDYGGGPDSSHFSALTQITRSNVNQLEVAWTYPTQDQNSYLFNPLIVDNVMYVLARNHSLVALDAQSGKEVWIHENLAGITTRGIAYWESRDRKDRRLIFALNDYLQQIDARTGKSILNFGEQGLVDLRDGLGRDPNTVTRIQSNAPGRVFEDLIILGSAPGESYFAAPGDIRAYNVITGKMAWVFHTIPRPGEEFYETWAKDAWKYVGGANTWGEMTIDVKRGIVYLPTGSPTYDYFGADRSGDNLFGNCLLALDARTGKRLWHFQMVHHDLWDYDMTAAPQLVTVRHDGRLVDAVSQSSKQGFLYVFDRVTGKPLWPIEERKVPASDMPGERASPTQPFPAAPPPFARQKMTAEDINPYILTAEERATWRDRLASARNEGLFTPPGLTESISLPGGRGGNNWGTGAANADKGTVYLTSQDWPTLYRLRLEDPLAARPNNRASQGSGIYQQRCQGCHRLDGPGGGPRPLSGINTRFTAAEFGALVHTGRGEMPGFADLDDAATTALYSYLGDRNAAGRNTASGSGDAARPAPGPVVASGGAPGGREPRQVMGPRYTPLGGPPYPEGVNAPTVRYYTDWGLFPDKPYIINPPWSSLVAYDLNRGTIKWKVPLGQDPKAAAEGAKDTGAFGAEHHGMVVTATGLIFAGASDGKLRAYDEETGRVLWTATLPAGSEGIPSMYEVSGRQYLAVPASSDLNPGGGHLSPGEVASRSSVTRGYVVYALPRASQKARSNTAESK

Samples

Sample ID Description Type Environment
1 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
2 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
3 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
4 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
5 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
6 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
7 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
8 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
9 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
10 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
11 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
12 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
13 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
14 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
15 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
16 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
17 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
18 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
19 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
20 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
21 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
22 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
23 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
24 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
25 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
26 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
27 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
28 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
29 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
30 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
31 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
32 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
33 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
34 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
35 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
36 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
37 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
38 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
39 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
40 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
41 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
42 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
43 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
44 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
45 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
46 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
47 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
48 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
49 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
50 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
51 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
52 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
53 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
54 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
67 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
69 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
70 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
71 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
72 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
73 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
74 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
75 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
76 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
77 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
78 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
79 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
80 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
81 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
82 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
83 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
84 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
85 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
86 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
87 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
88 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
89 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
90 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
91 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
92 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
93 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
94 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
95 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
96 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
97 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
98 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
99 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
100 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
101 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
102 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
103 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
104 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
105 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
106 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
107 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
108 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
109 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
110 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
111 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
112 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
113 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
114 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
115 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
116 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
117 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
118 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.6
Nodule 0
Rhizoplane 1.6
Rhizosphere 96.79
Stem 0
Stem Tuber 0
Unclassified 10.7

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068870_10015462 3300005840 Unclassified 3621
2 Ga0065707_10003013 3300005295 Bacteria 4063
3 Ga0070670_100005380 3300005331 Bacteria 10809
4 Ga0070670_100033930 3300005331 Bacteria 4394
5 Ga0070689_100007388 3300005340 Bacteria 7677
6 Ga0070689_100007592 3300005340 Bacteria 7597
7 Ga0070689_100027490 3300005340 Bacteria 4289
8 Ga0070675_100000277 3300005354 Bacteria 33950
9 Ga0070688_100033239 3300005365 Bacteria 3116
10 Ga0070714_100025943 3300005435 Bacteria 4840
11 Ga0070713_100006668 3300005436 Bacteria 8034
12 Ga0070701_10023559 3300005438 Bacteria 2967
13 Ga0070700_100021608 3300005441 Bacteria 3742
14 Ga0068867_100072191 3300005459 Bacteria 2583
15 Ga0070685_10016218 3300005466 Bacteria 3967
16 Ga0070699_100059136 3300005518 Bacteria 3321
17 Ga0068853_100003580 3300005539 Bacteria 11896
18 Ga0070704_100012587 3300005549 Bacteria 5228
19 Ga0068855_100012090 3300005563 Bacteria 10433
20 Ga0068855_100043914 3300005563 Bacteria 5292
21 Ga0070664_100011096 3300005564 Bacteria 7304
22 Ga0068856_100005852 3300005614 Bacteria 12119
23 Ga0068856_100007250 3300005614 Bacteria 10817
24 Ga0070702_100006757 3300005615 Bacteria 5451
25 Ga0068859_100053482 3300005617 Bacteria 4061
26 Ga0068864_100083560 3300005618 Bacteria 2804
27 Ga0068861_100007873 3300005719 Bacteria 7332
28 Ga0068861_100024925 3300005719 Bacteria 4331
29 Ga0068861_100056278 3300005719 Bacteria 3002
30 Ga0068863_100025395 3300005841 Bacteria 5649
31 Ga0068863_100103448 3300005841 Bacteria 2709
32 Ga0068858_100050299 3300005842 Bacteria 3857
33 Ga0068860_100051098 3300005843 Unclassified 3934
34 Ga0068862_100005980 3300005844 Bacteria 10130
35 Ga0075363_100011867 3300006048 Bacteria 4184
36 Ga0075367_10009864 3300006178 Bacteria 5002
37 Ga0097621_100003123 3300006237 Bacteria 11365
38 Ga0097621_100029934 3300006237 Unclassified 4304
39 Ga0097621_100126158 3300006237 Bacteria 2174
40 Ga0068871_100019080 3300006358 Bacteria 5229
41 Ga0075428_100000056 3300006844 Bacteria 89990
42 Ga0075428_100000840 3300006844 Bacteria 32170
43 Ga0075428_100001028 3300006844 Bacteria 29562
44 Ga0075428_100003113 3300006844 Bacteria 18114
45 Ga0075430_100079654 3300006846 Bacteria 2745
46 Ga0075431_100003720 3300006847 Bacteria 14823
47 Ga0075431_100015919 3300006847 Bacteria 7629
48 Ga0075431_100120668 3300006847 Unclassified 2705
49 Ga0097620_100053483 3300006931 Bacteria 4061
50 Ga0105240_10025341 3300009093 Bacteria 7796
51 Ga0105240_10128211 3300009093 Unclassified 3046
52 Ga0111539_10000002 3300009094 Bacteria 983359
53 Ga0111539_10000009 3300009094 Bacteria 375223
54 Ga0111539_10000015 3300009094 Bacteria 296576
55 Ga0111539_10002561 3300009094 Bacteria 24068
56 Ga0111539_10002574 3300009094 Bacteria 24010
57 Ga0111539_10005469 3300009094 Bacteria 16436
58 Ga0111539_10043193 3300009094 Bacteria 5405
59 Ga0111539_10121421 3300009094 Bacteria 3061
60 Ga0105245_10005131 3300009098 Bacteria 11507
61 Ga0105245_10097979 3300009098 Bacteria 2709
62 Ga0114129_10001460 3300009147 Bacteria 31941
63 Ga0114129_10020594 3300009147 Bacteria 9379
64 Ga0114129_10043141 3300009147 Bacteria 6347
65 Ga0114129_10124019 3300009147 Unclassified 3553
66 Ga0114129_10192891 3300009147 Bacteria 2765
67 Ga0105243_10026799 3300009148 Bacteria 4414
68 Ga0105242_10095331 3300009176 Unclassified 2512
69 Ga0105248_10131623 3300009177 Bacteria 2822
70 Ga0105248_10161181 3300009177 Bacteria 2530
71 Ga0105238_10091929 3300009551 Unclassified 3022
72 Ga0157371_10073300 3300013102 Unclassified 2425
73 Ga0157370_10028344 3300013104 Bacteria 5510
74 Ga0157369_10000399 3300013105 Bacteria 57828
75 Ga0157369_10003508 3300013105 Bacteria 18633
76 Ga0157369_10012296 3300013105 Bacteria 9722
77 Ga0157369_10027062 3300013105 Bacteria 6358
78 Ga0157374_10041539 3300013296 Unclassified 4239
79 Ga0157378_10005174 3300013297 Bacteria 11454
80 Ga0163162_10029009 3300013306 Bacteria 5476
81 Ga0157372_10047415 3300013307 Unclassified 4775
82 Ga0157375_10007222 3300013308 Bacteria 9715
83 Ga0163163_10000719 3300014325 Bacteria 28058
84 Ga0163163_10009745 3300014325 Bacteria 8602
85 Ga0163163_10063928 3300014325 Unclassified 3651
86 Ga0163163_10121562 3300014325 Unclassified 2645
87 Ga0157380_10036012 3300014326 Unclassified 3827
88 Ga0157379_10059408 3300014968 Unclassified 3418
89 Ga0207650_10008865 3300025925 Bacteria 6873
90 Ga0207700_10018271 3300025928 Bacteria 4707
91 Ga0207664_10011844 3300025929 Bacteria 6220
92 Ga0207709_10011979 3300025935 Bacteria 4780
93 Ga0207670_10006187 3300025936 Bacteria 6622
94 Ga0207667_10024109 3300025949 Bacteria 6687
95 Ga0207667_10036558 3300025949 Bacteria 5262
96 Ga0207658_10020145 3300025986 Unclassified 4619
97 Ga0207703_10037060 3300026035 Bacteria 3885
98 Ga0207708_10011521 3300026075 Bacteria 6588
99 Ga0207708_10030315 3300026075 Bacteria 4100
100 Ga0207641_10006531 3300026088 Bacteria 9809
101 Ga0207641_10105401 3300026088 Bacteria 2490
102 Ga0207648_10120523 3300026089 Bacteria 2306
103 Ga0207675_100001730 3300026118 Bacteria 21862
104 Ga0207675_100024534 3300026118 Bacteria 5606
105 Ga0207675_100029080 3300026118 Bacteria 5150
106 Ga0207675_100043271 3300026118 Bacteria 4206
107 Ga0207428_10000004 3300027907 Bacteria 727800
108 Ga0207428_10000005 3300027907 Bacteria 520045
109 Ga0207428_10000048 3300027907 Bacteria 180760
110 Ga0207428_10004785 3300027907 Bacteria 12788
111 Ga0207428_10010136 3300027907 Bacteria 8428
112 Ga0268264_10050916 3300028381 Bacteria 3450
113 Ga0307413_10012345 3300031824 Bacteria 4249
114 Ga0307410_10007732 3300031852 Bacteria 5903
115 Ga0307406_10022789 3300031901 Bacteria 3718
116 Ga0307407_10001342 3300031903 Bacteria 8833
117 Ga0307412_10003949 3300031911 Bacteria 8266
118 Ga0307409_100001759 3300031995 Bacteria 10943
119 Ga0307409_100033662 3300031995 Unclassified 3732
120 Ga0307416_100002025 3300032002 Bacteria 11394
121 Ga0307416_100023990 3300032002 Bacteria 4441
122 Ga0307416_100035587 3300032002 Unclassified 3805
123 Ga0307411_10008554 3300032005 Bacteria 5312
124 Ga0307415_100002569 3300032126 Bacteria 9076
125 Ga0373937_0053392 3300036401 Bacteria 3707
126 Ga0395899_0001915 3300037312 Bacteria 17168
127 Ga0395900_0000942 3300037418 Bacteria 37967
128 Ga0395898_0000169 3300037466 Bacteria 168667
129 Ga0395905_0000109 3300037471 Bacteria 137754
130 Ga0395901_0024787 3300038443 Bacteria 6157
131 Ga0495590_0019440 3300046457 Bacteria 2421
132 Ga0495643_0007214 3300046522 Bacteria 7203
133 Ga0495667_0002449 3300046559 Bacteria 12391
134 Ga0495625_0010957 3300046660 Bacteria 7442
135 Ga0495657_0001577 3300046675 Bacteria 19597
136 Ga0495674_0003814 3300047319 Bacteria 14647
137 Ga0495674_0022672 3300047319 Bacteria 5788
138 Ga0495674_0036752 3300047319 Bacteria 4406
139 Ga0495672_0013790 3300047320 Bacteria 5560
140 Ga0496106_0037535 3300048909 Bacteria 3625
141 Ga0496115_0010520 3300048918 Bacteria 6916
142 Ga0496115_0049926 3300048918 Unclassified 3350
143 Ga0501036_0022456 3300049572 Bacteria 5308
144 Ga0501038_0053361 3300049574 Bacteria 3481
145 Ga0501039_0024857 3300049575 Bacteria 4602
146 Ga0501040_0062412 3300049576 Bacteria 2564
147 Ga0501048_0041526 3300049582 Bacteria 3294
148 Ga0501067_0033990 3300049583 Bacteria 2829
149 Ga0501068_0000340 3300049584 Bacteria 23508
150 Ga0501068_0002059 3300049584 Bacteria 10721
151 Ga0501070_0006971 3300049586 Bacteria 9613
152 Ga0501070_0015273 3300049586 Bacteria 6462
153 Ga0501071_0001254 3300049587 Bacteria 14381
154 Ga0501071_0012464 3300049587 Bacteria 5767
155 Ga0501073_0000076 3300049589 Bacteria 61536
156 Ga0501073_0001286 3300049589 Bacteria 18435
157 Ga0501074_0001510 3300049590 Bacteria 15706
158 Ga0501076_0014950 3300049592 Bacteria 5858
159 Ga0501076_0018901 3300049592 Bacteria 5258
160 Ga0501079_0000458 3300049741 Bacteria 26792
161 Ga0501079_0000501 3300049741 Bacteria 25528
162 Ga0501080_0001658 3300049742 Bacteria 18945
163 Ga0501080_0002470 3300049742 Bacteria 16188
164 Ga0501080_0043202 3300049742 Bacteria 4197
165 Ga0501083_0021934 3300049744 Bacteria 4434
166 Ga0501045_0015064 3300049824 Bacteria 5488
167 Ga0501045_0055053 3300049824 Bacteria 2909
168 nmdc:mga05p37_12050_c1 3300050507 Bacteria 10320
169 nmdc:mga05p37_4189_c1 3300050507 Bacteria 16859
170 nmdc:mga05p37_42707_c1 3300050507 Bacteria 5573
171 nmdc:mga09592_6583_c1 3300050508 Bacteria 9462
172 nmdc:mga06r32_20644_c1 3300050510 Bacteria 6068
173 nmdc:mga06r32_97319_c1 3300050510 Unclassified 2883
174 nmdc:mga08y16_26327_c1 3300050511 Bacteria 6132
175 nmdc:mga08y16_2835_c1 3300050511 Bacteria 17814
176 nmdc:mga08y16_2_c1 3300050511 Bacteria 983367
177 nmdc:mga08y16_3683_c1 3300050511 Bacteria 15953
178 nmdc:mga08y16_8_c1 3300050511 Bacteria 571177
179 nmdc:mga08y16_9_c1 3300050511 Bacteria 566088
180 nmdc:mga0a205_18236_c1 3300050515 Bacteria 6594
181 Ga0500568_0000827 3300053139 Bacteria 21776
182 Ga0501084_0006310 3300054114 Bacteria 9743
183 Ga0590071_006849 3300059421 Bacteria 2700
184 Ga0590075_000054 3300059424 Bacteria 29574
185 Ga0590077_000125 3300059426 Bacteria 20828
186 Ga0501082_0000024 3300060353 Bacteria 103908
187 Ga0501082_0007307 3300060353 Bacteria 9531
188 Ga0068870_10015462
189 Ga0065707_10003013
190 Ga0070670_100005380
191 Ga0070670_100033930
192 Ga0070689_100007388
193 Ga0070689_100007592
194 Ga0070689_100027490
195 Ga0070675_100000277
196 Ga0070688_100033239
197 Ga0070714_100025943
198 Ga0070713_100006668
199 Ga0070701_10023559
200 Ga0070700_100021608
201 Ga0068867_100072191
202 Ga0070685_10016218
203 Ga0070699_100059136
204 Ga0068853_100003580
205 Ga0070704_100012587
206 Ga0068855_100012090
207 Ga0068855_100043914
208 Ga0070664_100011096
209 Ga0068856_100005852
210 Ga0068856_100007250
211 Ga0070702_100006757
212 Ga0068859_100053482
213 Ga0068864_100083560
214 Ga0068861_100007873
215 Ga0068861_100024925
216 Ga0068861_100056278
217 Ga0068863_100025395
218 Ga0068863_100103448
219 Ga0068858_100050299
220 Ga0068860_100051098
221 Ga0068862_100005980
222 Ga0075363_100011867
223 Ga0075367_10009864
224 Ga0097621_100003123
225 Ga0097621_100029934
226 Ga0097621_100126158
227 Ga0068871_100019080
228 Ga0075428_100000056
229 Ga0075428_100000840
230 Ga0075428_100001028
231 Ga0075428_100003113
232 Ga0075430_100079654
233 Ga0075431_100003720
234 Ga0075431_100015919
235 Ga0075431_100120668
236 Ga0097620_100053483
237 Ga0105240_10025341
238 Ga0105240_10128211
239 Ga0111539_10000002
240 Ga0111539_10000009
241 Ga0111539_10000015
242 Ga0111539_10002561
243 Ga0111539_10002574
244 Ga0111539_10005469
245 Ga0111539_10043193
246 Ga0111539_10121421
247 Ga0105245_10005131
248 Ga0105245_10097979
249 Ga0114129_10001460
250 Ga0114129_10020594
251 Ga0114129_10043141
252 Ga0114129_10124019
253 Ga0114129_10192891
254 Ga0105243_10026799
255 Ga0105242_10095331
256 Ga0105248_10131623
257 Ga0105248_10161181
258 Ga0105238_10091929
259 Ga0157371_10073300
260 Ga0157370_10028344
261 Ga0157369_10000399
262 Ga0157369_10003508
263 Ga0157369_10012296
264 Ga0157369_10027062
265 Ga0157374_10041539
266 Ga0157378_10005174
267 Ga0163162_10029009
268 Ga0157372_10047415
269 Ga0157375_10007222
270 Ga0163163_10000719
271 Ga0163163_10009745
272 Ga0163163_10063928
273 Ga0163163_10121562
274 Ga0157380_10036012
275 Ga0157379_10059408
276 Ga0207650_10008865
277 Ga0207700_10018271
278 Ga0207664_10011844
279 Ga0207709_10011979
280 Ga0207670_10006187
281 Ga0207667_10024109
282 Ga0207667_10036558
283 Ga0207658_10020145
284 Ga0207703_10037060
285 Ga0207708_10011521
286 Ga0207708_10030315
287 Ga0207641_10006531
288 Ga0207641_10105401
289 Ga0207648_10120523
290 Ga0207675_100001730
291 Ga0207675_100024534
292 Ga0207675_100029080
293 Ga0207675_100043271
294 Ga0207428_10000004
295 Ga0207428_10000005
296 Ga0207428_10000048
297 Ga0207428_10004785
298 Ga0207428_10010136
299 Ga0268264_10050916
300 Ga0307413_10012345
301 Ga0307410_10007732
302 Ga0307406_10022789
303 Ga0307407_10001342
304 Ga0307412_10003949
305 Ga0307409_100001759
306 Ga0307409_100033662
307 Ga0307416_100002025
308 Ga0307416_100023990
309 Ga0307416_100035587
310 Ga0307411_10008554
311 Ga0307415_100002569
312 Ga0373937_0053392
313 Ga0395899_0001915
314 Ga0395900_0000942
315 Ga0395898_0000169
316 Ga0395905_0000109
317 Ga0395901_0024787
318 Ga0495590_0019440
319 Ga0495643_0007214
320 Ga0495667_0002449
321 Ga0495625_0010957
322 Ga0495657_0001577
323 Ga0495674_0003814
324 Ga0495674_0022672
325 Ga0495674_0036752
326 Ga0495672_0013790
327 Ga0496106_0037535
328 Ga0496115_0010520
329 Ga0496115_0049926
330 Ga0501036_0022456
331 Ga0501038_0053361
332 Ga0501039_0024857
333 Ga0501040_0062412
334 Ga0501048_0041526
335 Ga0501067_0033990
336 Ga0501068_0000340
337 Ga0501068_0002059
338 Ga0501070_0006971
339 Ga0501070_0015273
340 Ga0501071_0001254
341 Ga0501071_0012464
342 Ga0501073_0000076
343 Ga0501073_0001286
344 Ga0501074_0001510
345 Ga0501076_0014950
346 Ga0501076_0018901
347 Ga0501079_0000458
348 Ga0501079_0000501
349 Ga0501080_0001658
350 Ga0501080_0002470
351 Ga0501080_0043202
352 Ga0501083_0021934
353 Ga0501045_0015064
354 Ga0501045_0055053
355 nmdc:mga05p37_12050_c1
356 nmdc:mga05p37_4189_c1
357 nmdc:mga05p37_42707_c1
358 nmdc:mga09592_6583_c1
359 nmdc:mga06r32_20644_c1
360 nmdc:mga06r32_97319_c1
361 nmdc:mga08y16_26327_c1
362 nmdc:mga08y16_2835_c1
363 nmdc:mga08y16_2_c1
364 nmdc:mga08y16_3683_c1
365 nmdc:mga08y16_8_c1
366 nmdc:mga08y16_9_c1
367 nmdc:mga0a205_18236_c1
368 Ga0500568_0000827
369 Ga0501084_0006310
370 Ga0590071_006849
371 Ga0590075_000054
372 Ga0590077_000125
373 Ga0501082_0000024
374 Ga0501082_0007307

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13570

PQQ_3

PQQ-like domain

634

690

0.95

PF01011

PQQ

PQQ enzyme repeat

277

308

0.92

PF13570

PQQ_3

PQQ-like domain

57

97

0.91

PF01011

PQQ

PQQ enzyme repeat

672

709

0.89

PF13442

Cytochrome_CBB3

Cytochrome C oxidase, cbb3-type, subunit III

471

541

0.84

PF13360

PQQ_2

PQQ-like domain

623

723

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
6onq-assembly1.cif.gz_A crystal structure of c-type cytochrome xoxg from methylobacterium extorquens am1 0.8292 449 522
7o38-assembly1.cif.gz_A cytochrome c kustc0562 from kuenenia stuttgartiensis 0.819 452 520
2zbo-assembly1.cif.gz_A crystal structure of low-redox-potential cytochrom c6 from brown alga hizikia fusiformis at 1.6 a resolution 0.8013 447 519
1c75-assembly1.cif.gz_A "0.97 a ""ab initio"" crystal structure of cytochrome c-553 from bacillus pasteurii" 0.786 452 520
1cyi-assembly1.cif.gz_A cytochrome c6 0.7786 447 517
ID Description Score Start End Superfamily
af_A0A1D6NWT6_948_1096_2.40.128.630 Mainly Beta;Beta Barrel;Lipocalin; 0.8016 217 330 2.40.128.630
af_Q9VLL0_923_1012_2.40.10.480 Mainly Beta;Beta Barrel;Thrombin, subunit H; 0.7964 59 121 2.40.10.480
af_Q60282_716_812_2.40.128.630 Mainly Beta;Beta Barrel;Lipocalin; 0.7945 165 322 2.40.128.630
af_Q60259_9_76_2.40.10.480 Mainly Beta;Beta Barrel;Thrombin, subunit H; 0.7915 162 278 2.40.10.480
af_Q60259_9_76_2.40.10.480 Mainly Beta;Beta Barrel;Thrombin, subunit H; 0.781 162 278 2.40.10.480
ID Description Score Start End GO Terms
AF-A0A2G5K9W6-F1-model_v4 Uncharacterized protein 0.967 25 126
AF-A0A4Q5YGN6-F1-model_v4 Quinoprotein glucose dehydrogenase 0.9668 28 309 GO:0016491
AF-A0A2V9GSX5-F1-model_v4 Pyrroloquinoline quinone-dependent dehydrogenase 0.9596 28 347 GO:0016491
AF-A0A3D1AQA2-F1-model_v4 Pyrroloquinoline quinone-dependent dehydrogenase 0.9507 25 301 GO:0016491
AF-A0A2U3LQ72-F1-model_v4 Quinoprotein glucose dehydrogenase 0.9442 25 387 GO:0016491

Map