F287083

General Info

Members Datasets Scaffolds Average Seq Length
187 157 374 115

Family's Representative Sequence

Representative Sequence 3300005329|Ga0070683_100358805|Ga0070683_1003588052
Length 136
Sequence VKAAPIIGYRFKATARREARVKLARTIYKISPQKLWREAEKAGVFTGAPVDLADGFIHFSTAGQVAETAARHFAGQSDLVLAAIDAAALGDALRYEPSRGGALFPHLYGTLPLTAVRWVKPLPLTAQGHEFPELEP

Samples

Sample ID Description Type Environment
1 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
4 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
5 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
6 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
7 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
8 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
9 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
10 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
11 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
12 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
13 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
14 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
15 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
16 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
17 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
18 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
19 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
20 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
21 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
22 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
23 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
24 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
25 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
26 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
27 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
28 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
29 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
30 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
31 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
32 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
33 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
34 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
35 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
53 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
54 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
55 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
56 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
57 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
58 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
59 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
60 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
61 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
62 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
63 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
64 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
65 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
66 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
67 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
68 3300034819 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1 Metagenome Rhizosphere
69 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
70 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
71 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
72 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
73 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
74 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
75 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
76 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
77 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
78 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
79 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
80 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
81 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
82 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
83 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
84 3300041460 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG Metagenome Rhizoplane
85 3300041491 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG Metagenome Unclassified
86 3300042438 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311FE14Z081617_5533 Metagenome Rhizosphere
87 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
88 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
89 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
90 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
91 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
92 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
93 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
94 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
95 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
96 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
97 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
98 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
99 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
100 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
101 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
102 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
103 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
104 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
105 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
106 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
107 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
108 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
109 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
110 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
111 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
112 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
113 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
114 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
115 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
116 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
117 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
118 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
119 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
120 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
121 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
122 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
123 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
124 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
125 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
126 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
127 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
128 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
129 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
130 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
131 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
132 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
133 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
134 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
135 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
136 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
137 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
138 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
139 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
140 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
141 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
142 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
143 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
144 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
145 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
146 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
147 3300053116 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 endosphere Metagenome Endosphere
148 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
149 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
150 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
151 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
152 2508501114 Microvirga lotononidis WSM3557 Isolate Nodule
153 2757320392 Phyllobacterium leguminum ORS 1419 Isolate Nodule
154 2837651117 Pseudohoeflea suaedae YC6898 Isolate Unclassified
155 2917554339 Chthonobacter rhizosphaerae yh7-1 Isolate Rhizosphere
156 2941485952 Brevundimonas faecalis 2814 Isolate Rhizosphere
157 2996310559 Mesorhizobium zhangyense CGMCC 1.15528 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 96.26
Metatranscriptomes 0.53
Isolates 3.21

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.49
Nodule 1.07
Rhizoplane 10.7
Rhizosphere 73.8
Stem 0
Stem Tuber 0
Unclassified 0.53

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070683_100358805 3300005329 Bacteria 1388
2 rootH2_10007475 3300003320 Bacteria 1201
3 Ga0070670_100195108 3300005331 Bacteria 1759
4 Ga0068869_100378977 3300005334 Bacteria 1159
5 Ga0068868_101132227 3300005338 Bacteria 721
6 Ga0070689_100056003 3300005340 Bacteria 3056
7 Ga0070689_100383526 3300005340 Bacteria 1185
8 Ga0070689_100611085 3300005340 Bacteria 945
9 Ga0070688_100104304 3300005365 Bacteria 1875
10 Ga0070709_11764134 3300005434 Bacteria 506
11 Ga0070678_100424320 3300005456 Bacteria 1160
12 Ga0070681_11009381 3300005458 Bacteria 752
13 Ga0070684_100033320 3300005535 Bacteria 4397
14 Ga0068853_101087422 3300005539 Bacteria 771
15 Ga0070693_100510981 3300005547 Bacteria 854
16 Ga0070665_100152238 3300005548 Bacteria 2316
17 Ga0068855_100299810 3300005563 Bacteria 1780
18 Ga0068864_100727608 3300005618 Bacteria 971
19 Ga0068866_10367385 3300005718 Bacteria 919
20 Ga0068858_100011385 3300005842 Bacteria 8399
21 Ga0068860_100206904 3300005843 Bacteria 1903
22 Ga0068860_102525549 3300005843 Bacteria 533
23 Ga0075363_100047078 3300006048 Bacteria 2289
24 Ga0070716_100244344 3300006173 Bacteria 1219
25 Ga0070712_100347012 3300006175 Bacteria 1214
26 Ga0075362_10016037 3300006177 Bacteria 3061
27 Ga0075362_10170935 3300006177 Bacteria 1050
28 Ga0075362_10228951 3300006177 Bacteria 910
29 Ga0075366_10017469 3300006195 Bacteria 4128
30 Ga0068865_100428410 3300006881 Bacteria 1089
31 Ga0105240_10840200 3300009093 Bacteria 992
32 Ga0105240_11865910 3300009093 Bacteria 626
33 Ga0105247_10370389 3300009101 Bacteria 1013
34 Ga0105247_11768546 3300009101 Bacteria 513
35 Ga0114129_11006773 3300009147 Bacteria 1049
36 Ga0114129_11172638 3300009147 Bacteria 958
37 Ga0105243_11130214 3300009148 Bacteria 793
38 Ga0105241_10003575 3300009174 Bacteria 11561
39 Ga0105238_10029023 3300009551 Bacteria 5635
40 Ga0157378_10659413 3300013297 Bacteria 1063
41 Ga0157378_11393708 3300013297 Bacteria 744
42 Ga0157380_10218101 3300014326 Bacteria 1705
43 Ga0209025_1000037 3300025294 Bacteria 383429
44 Ga0207710_10449108 3300025900 Bacteria 665
45 Ga0207654_10016431 3300025911 Bacteria 3854
46 Ga0207663_10065224 3300025916 Bacteria 2327
47 Ga0207662_10040258 3300025918 Bacteria 2746
48 Ga0207652_10513575 3300025921 Bacteria 1078
49 Ga0207652_11184903 3300025921 Bacteria 665
50 Ga0207694_10107839 3300025924 Bacteria 2213
51 Ga0207694_10301438 3300025924 Bacteria 1319
52 Ga0207700_10544004 3300025928 Bacteria 1030
53 Ga0207664_10150796 3300025929 Bacteria 1975
54 Ga0207664_10529951 3300025929 Bacteria 1056
55 Ga0207709_10249578 3300025935 Bacteria 1295
56 Ga0207670_10092701 3300025936 Bacteria 2138
57 Ga0207704_11424329 3300025938 Bacteria 594
58 Ga0207661_10449130 3300025944 Bacteria 1174
59 Ga0207703_10011974 3300026035 Bacteria 6756
60 Ga0207639_11086744 3300026041 Bacteria 750
61 Ga0207676_10427452 3300026095 Bacteria 1244
62 Ga0207683_11242486 3300026121 Bacteria 690
63 Ga0268264_10427845 3300028381 Bacteria 1278
64 Ga0265338_10008293 3300028800 Bacteria 12644
65 Ga0265760_10064978 3300031090 Bacteria 1113
66 Ga0265328_10000028 3300031239 Bacteria 112296
67 Ga0265325_10037969 3300031241 Bacteria 2543
68 Ga0265329_10040628 3300031242 Bacteria 1493
69 Ga0265340_10195554 3300031247 Bacteria 911
70 Ga0265339_10003094 3300031249 Bacteria 11708
71 Ga0265339_10118566 3300031249 Bacteria 1362
72 Ga0265331_10000437 3300031250 Bacteria 40997
73 Ga0265327_10104966 3300031251 Bacteria 1358
74 Ga0265316_10001886 3300031344 Bacteria 22017
75 Ga0265313_10000020 3300031595 Bacteria 145873
76 Ga0316579_10097389 3300031691 Bacteria 1407
77 Ga0307516_10009180 3300031730 Bacteria 11072
78 Ga0307412_10654696 3300031911 Bacteria 896
79 Ga0307409_100251654 3300031995 Bacteria 1616
80 Ga0307416_100419591 3300032002 Bacteria 1382
81 Ga0373958_0209598 3300034819 Bacteria 514
82 Ga0373923_0029628 3300035111 Bacteria 2196
83 Ga0373936_0135677 3300035113 Bacteria 1060
84 Ga0373954_0156548 3300035118 Bacteria 1114
85 Ga0373924_0010962 3300035410 Bacteria 3356
86 Ga0373935_0428293 3300035692 Bacteria 953
87 Ga0316584_0629993 3300036712 Bacteria 741
88 Ga0395900_0079493 3300037418 Bacteria 3370
89 Ga0395898_0133558 3300037466 Bacteria 2376
90 Ga0395905_0343088 3300037471 Bacteria 1385
91 Ga0395905_0699136 3300037471 Bacteria 916
92 Ga0436364_1065036 3300037853 Bacteria 666
93 Ga0436364_1121854 3300037853 Bacteria 564
94 Ga0395901_0064786 3300038443 Bacteria 3804
95 Ga0436365_1044397 3300039437 Bacteria 2118
96 Ga0436360_1362443 3300039438 Bacteria 522
97 Ga0436363_0983651 3300039450 Bacteria 1100
98 Ga0436362_0493454 3300039453 Bacteria 672
99 Ga0451802_0586197 3300041460 Bacteria 961
100 Ga0451833_0750509 3300041491 Bacteria 705
101 Ga0439459_0189397 3300042438 Bacteria 557
102 Ga0466971_0326356 3300044719 Bacteria 740
103 Ga0466959_0006598 3300045049 Bacteria 8058
104 Ga0495638_0007062 3300046460 Bacteria 8100
105 Ga0495638_0128617 3300046460 Bacteria 1490
106 Ga0495638_0423036 3300046460 Bacteria 686
107 Ga0495651_0090498 3300046462 Bacteria 2295
108 Ga0495608_0099434 3300046511 Bacteria 1876
109 Ga0495630_0226103 3300046517 Bacteria 1429
110 Ga0495652_0188664 3300046529 Bacteria 1575
111 Ga0495657_0093920 3300046675 Bacteria 1919
112 Ga0495599_0021538 3300046678 Bacteria 4022
113 Ga0495649_0551056 3300046694 Bacteria 571
114 Ga0495600_0178402 3300046809 Bacteria 1369
115 Ga0495581_0281704 3300047315 Bacteria 972
116 Ga0495604_0974396 3300047317 Bacteria 526
117 Ga0495672_0121750 3300047320 Bacteria 1386
118 Ga0495680_0152665 3300047322 Bacteria 1682
119 Ga0495684_0126739 3300047471 Bacteria 1920
120 Ga0496101_0062398 3300048904 Bacteria 2709
121 Ga0496102_0074943 3300048905 Bacteria 3110
122 Ga0496103_0003370 3300048906 Bacteria 9767
123 Ga0496104_0001438 3300048907 Bacteria 20578
124 Ga0496104_0932351 3300048907 Bacteria 773
125 Ga0496105_0005611 3300048908 Bacteria 9542
126 Ga0496106_0005692 3300048909 Bacteria 9216
127 Ga0496107_0004396 3300048910 Bacteria 9543
128 Ga0496108_0003226 3300048911 Bacteria 13110
129 Ga0496109_0000577 3300048912 Bacteria 30719
130 Ga0496109_0300820 3300048912 Bacteria 1513
131 Ga0496110_0004425 3300048913 Bacteria 10885
132 Ga0496110_1003184 3300048913 Bacteria 742
133 Ga0496111_0003641 3300048914 Bacteria 9560
134 Ga0496112_0002710 3300048915 Bacteria 14331
135 Ga0496112_0541007 3300048915 Bacteria 1099
136 Ga0496112_1177287 3300048915 Bacteria 684
137 Ga0496113_0000024 3300048916 Bacteria 66142
138 Ga0496115_0354991 3300048918 Bacteria 1195
139 Ga0496117_0007129 3300048920 Bacteria 11047
140 Ga0496119_0278351 3300048922 Bacteria 833
141 Ga0496122_0000147 3300048925 Bacteria 165589
142 Ga0496123_0000339 3300048926 Bacteria 88118
143 Ga0501034_0417624 3300049571 Bacteria 1263
144 Ga0501034_1363567 3300049571 Bacteria 585
145 Ga0501036_0758636 3300049572 Bacteria 800
146 Ga0501039_0780183 3300049575 Bacteria 746
147 Ga0501040_0345362 3300049576 Bacteria 1066
148 Ga0501047_1211122 3300049581 Bacteria 569
149 Ga0501048_0595400 3300049582 Bacteria 794
150 Ga0501068_0730808 3300049584 Bacteria 648
151 Ga0501070_0068649 3300049586 Bacteria 2934
152 Ga0501071_0687393 3300049587 Bacteria 788
153 Ga0501073_0177244 3300049589 Bacteria 1475
154 Ga0501073_0226410 3300049589 Bacteria 1292
155 Ga0501074_0036242 3300049590 Bacteria 3574
156 Ga0501074_1111161 3300049590 Bacteria 555
157 Ga0501077_0083321 3300049593 Bacteria 2026
158 Ga0501077_0440969 3300049593 Bacteria 834
159 Ga0501079_0540096 3300049741 Bacteria 917
160 Ga0501081_0362272 3300049743 Bacteria 1070
161 Ga0501083_0039372 3300049744 Bacteria 3211
162 Ga0501083_0680783 3300049744 Bacteria 669
163 Ga0501035_0465981 3300049822 Bacteria 1044
164 Ga0501044_0706119 3300049823 Bacteria 893
165 nmdc:mga03683_128205_c1 3300050489 Bacteria 1133
166 nmdc:mga03683_353366_c1 3300050489 Bacteria 696
167 nmdc:mga03n38_43272_c1 3300050490 Bacteria 1973
168 nmdc:mga0k408_58920_c1 3300050493 Bacteria 2231
169 nmdc:mga06z11_241759_c1 3300050494 Bacteria 1060
170 nmdc:mga05p37_214221_c1 3300050507 Bacteria 2327
171 nmdc:mga05p37_692700_c1 3300050507 Bacteria 1133
172 nmdc:mga0n895_1089511_c1 3300050512 Bacteria 777
173 nmdc:mga0rr50_234804_c1 3300050513 Bacteria 1518
174 Ga0495595_0100330 3300053084 Bacteria 1396
175 Ga0495619_0049464 3300053085 Bacteria 2772
176 Ga0500592_008494 3300053116 Bacteria 1629
177 Ga0500658_0153664 3300053134 Bacteria 1039
178 Ga0500658_0344723 3300053134 Unclassified 684
179 Ga0590075_005010 3300059424 Bacteria 3131
180 Ga0501082_0132929 3300060353 Bacteria 2159
181 Ga0466962_0145695 3300061719 Bacteria 1148
182 2509075742 2508501114 Bacteria 7082538
183 2757572422 2757320392 Bacteria 3737298
184 2837651838 2837651117 Bacteria 3772164
185 2917558358 2917554339 Bacteria 4987857
186 2941489250 2941485952 Bacteria 3591484
187 2996312774 2996310559 Bacteria 6357320
188 Ga0070683_100358805
189 rootH2_10007475
190 Ga0070670_100195108
191 Ga0068869_100378977
192 Ga0068868_101132227
193 Ga0070689_100056003
194 Ga0070689_100383526
195 Ga0070689_100611085
196 Ga0070688_100104304
197 Ga0070709_11764134
198 Ga0070678_100424320
199 Ga0070681_11009381
200 Ga0070684_100033320
201 Ga0068853_101087422
202 Ga0070693_100510981
203 Ga0070665_100152238
204 Ga0068855_100299810
205 Ga0068864_100727608
206 Ga0068866_10367385
207 Ga0068858_100011385
208 Ga0068860_100206904
209 Ga0068860_102525549
210 Ga0075363_100047078
211 Ga0070716_100244344
212 Ga0070712_100347012
213 Ga0075362_10016037
214 Ga0075362_10170935
215 Ga0075362_10228951
216 Ga0075366_10017469
217 Ga0068865_100428410
218 Ga0105240_10840200
219 Ga0105240_11865910
220 Ga0105247_10370389
221 Ga0105247_11768546
222 Ga0114129_11006773
223 Ga0114129_11172638
224 Ga0105243_11130214
225 Ga0105241_10003575
226 Ga0105238_10029023
227 Ga0157378_10659413
228 Ga0157378_11393708
229 Ga0157380_10218101
230 Ga0209025_1000037
231 Ga0207710_10449108
232 Ga0207654_10016431
233 Ga0207663_10065224
234 Ga0207662_10040258
235 Ga0207652_10513575
236 Ga0207652_11184903
237 Ga0207694_10107839
238 Ga0207694_10301438
239 Ga0207700_10544004
240 Ga0207664_10150796
241 Ga0207664_10529951
242 Ga0207709_10249578
243 Ga0207670_10092701
244 Ga0207704_11424329
245 Ga0207661_10449130
246 Ga0207703_10011974
247 Ga0207639_11086744
248 Ga0207676_10427452
249 Ga0207683_11242486
250 Ga0268264_10427845
251 Ga0265338_10008293
252 Ga0265760_10064978
253 Ga0265328_10000028
254 Ga0265325_10037969
255 Ga0265329_10040628
256 Ga0265340_10195554
257 Ga0265339_10003094
258 Ga0265339_10118566
259 Ga0265331_10000437
260 Ga0265327_10104966
261 Ga0265316_10001886
262 Ga0265313_10000020
263 Ga0316579_10097389
264 Ga0307516_10009180
265 Ga0307412_10654696
266 Ga0307409_100251654
267 Ga0307416_100419591
268 Ga0373958_0209598
269 Ga0373923_0029628
270 Ga0373936_0135677
271 Ga0373954_0156548
272 Ga0373924_0010962
273 Ga0373935_0428293
274 Ga0316584_0629993
275 Ga0395900_0079493
276 Ga0395898_0133558
277 Ga0395905_0343088
278 Ga0395905_0699136
279 Ga0436364_1065036
280 Ga0436364_1121854
281 Ga0395901_0064786
282 Ga0436365_1044397
283 Ga0436360_1362443
284 Ga0436363_0983651
285 Ga0436362_0493454
286 Ga0451802_0586197
287 Ga0451833_0750509
288 Ga0439459_0189397
289 Ga0466971_0326356
290 Ga0466959_0006598
291 Ga0495638_0007062
292 Ga0495638_0128617
293 Ga0495638_0423036
294 Ga0495651_0090498
295 Ga0495608_0099434
296 Ga0495630_0226103
297 Ga0495652_0188664
298 Ga0495657_0093920
299 Ga0495599_0021538
300 Ga0495649_0551056
301 Ga0495600_0178402
302 Ga0495581_0281704
303 Ga0495604_0974396
304 Ga0495672_0121750
305 Ga0495680_0152665
306 Ga0495684_0126739
307 Ga0496101_0062398
308 Ga0496102_0074943
309 Ga0496103_0003370
310 Ga0496104_0001438
311 Ga0496104_0932351
312 Ga0496105_0005611
313 Ga0496106_0005692
314 Ga0496107_0004396
315 Ga0496108_0003226
316 Ga0496109_0000577
317 Ga0496109_0300820
318 Ga0496110_0004425
319 Ga0496110_1003184
320 Ga0496111_0003641
321 Ga0496112_0002710
322 Ga0496112_0541007
323 Ga0496112_1177287
324 Ga0496113_0000024
325 Ga0496115_0354991
326 Ga0496117_0007129
327 Ga0496119_0278351
328 Ga0496122_0000147
329 Ga0496123_0000339
330 Ga0501034_0417624
331 Ga0501034_1363567
332 Ga0501036_0758636
333 Ga0501039_0780183
334 Ga0501040_0345362
335 Ga0501047_1211122
336 Ga0501048_0595400
337 Ga0501068_0730808
338 Ga0501070_0068649
339 Ga0501071_0687393
340 Ga0501073_0177244
341 Ga0501073_0226410
342 Ga0501074_0036242
343 Ga0501074_1111161
344 Ga0501077_0083321
345 Ga0501077_0440969
346 Ga0501079_0540096
347 Ga0501081_0362272
348 Ga0501083_0039372
349 Ga0501083_0680783
350 Ga0501035_0465981
351 Ga0501044_0706119
352 nmdc:mga03683_128205_c1
353 nmdc:mga03683_353366_c1
354 nmdc:mga03n38_43272_c1
355 nmdc:mga0k408_58920_c1
356 nmdc:mga06z11_241759_c1
357 nmdc:mga05p37_214221_c1
358 nmdc:mga05p37_692700_c1
359 nmdc:mga0n895_1089511_c1
360 nmdc:mga0rr50_234804_c1
361 Ga0495595_0100330
362 Ga0495619_0049464
363 Ga0500592_008494
364 Ga0500658_0153664
365 Ga0500658_0344723
366 Ga0590075_005010
367 Ga0501082_0132929
368 Ga0466962_0145695
369 2509075742
370 2757572422
371 2837651838
372 2917558358
373 2941489250
374 2996312774

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF06108

DUF952

Protein of unknown function (DUF952)

30

119

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
2o0q-assembly1.cif.gz_A x-ray crystal structure of protein cc0527 from caulobacter crescentus. northeast structural genomics consortium target ccr55 0.9694 4 109
2o0p-assembly1.cif.gz_A x-ray crystal structure of protein cc0527 (v27m / l66m double mutant) from caulobacter crescentus. northeast structural genomics consortium target ccr55. 0.9662 4 109
2jqn-assembly1.cif.gz_A solution nmr structure of cc0527 from caulobacter crescentus. northeast structural genomics target ccr55 0.8982 4 109
2o0q-assembly1.cif.gz_A x-ray crystal structure of protein cc0527 from caulobacter crescentus. northeast structural genomics consortium target ccr55 0.8952 4 109
2o0p-assembly1.cif.gz_A x-ray crystal structure of protein cc0527 (v27m / l66m double mutant) from caulobacter crescentus. northeast structural genomics consortium target ccr55. 0.8925 4 109
ID Description Score Start End Superfamily
2o0pA00 Alpha Beta;Alpha-Beta Barrel;ADP-ribosylation fold;Protein of unknown function DUF952 0.9658 4 109 3.20.170.20
af_Q0DQS8_1_107_3.20.170.20 Alpha Beta;Alpha-Beta Barrel;ADP-ribosylation fold;Protein of unknown function DUF952 0.9452 10 106 3.20.170.20
2jqnA00 Alpha Beta;Alpha-Beta Barrel;ADP-ribosylation fold;Protein of unknown function DUF952 0.8982 4 109 3.20.170.20
2o0pA00 Alpha Beta;Alpha-Beta Barrel;ADP-ribosylation fold;Protein of unknown function DUF952 0.8908 4 109 3.20.170.20
af_O07206_8_119_3.20.170.20 Alpha Beta;Alpha-Beta Barrel;ADP-ribosylation fold;Protein of unknown function DUF952 0.8777 4 108 3.20.170.20
ID Description Score Start End GO Terms
AF-A0A537SCE3-F1-model_v4 DUF952 domain-containing protein 1.003 3 95
AF-A0A529ZHU9-F1-model_v4 DUF952 domain-containing protein 1 1 94
AF-A0A0S3PT68-F1-model_v4 Dihydroorotate dehydrogenase 1 3 101
AF-A0A1H3TDG2-F1-model_v4 Predicted acetyltransferase 0.9999 4 100 GO:0016747
AF-A0A1H1JQE9-F1-model_v4 Uncharacterized conserved protein, DUF952 family 0.9989 3 112

Map