F286886

General Info

Members Datasets Scaffolds Average Seq Length
186 153 372 712

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|8025478263|8025480280
Length 793
Sequence EAIVHPFFCENVPNPAAWLPMAGVSPRQPPAAPNDGAATKRPQPPPPRGLLGRLGHWCARHFVVVIVLWLAAIGGVQVLERSFGGEYSDDFALPSAQSQDGLDVLKAHDPAAGGYSGQVVLHDAAKPLTAFSGQINQTVAELRKLPHVLSVQNPLPPPGTPPARPPGTPNTGPLSDDGKTAYITVRFDSPPATLGAPYLDGVDDAVKPLRTAGVQVEYGGPLGELARPEPDDRSSELIGFGVAIVVLLVGFGSVIAAGVPLVTALAGVVIGLGVLSLLAAAFTFATVSPTLATMIGLGVGIDYALFLITRHRQHLMDGMDPAAGAARAVATSGRAVLVSGCTVIIALGGLTVSGVSFMGKLGAAAAVTVVSAVVGALTLVPALLGLIGSRIDKLRVRTPVAEGTTGEGTDGAQEAHGTWHRYAQRVERRPWWFLAAGVVTVAVLAIPVFSIQLGHIGDGADPTSFTDRRAYDLTAEAFGPGANGPLTLVIDQSGVPAADRPALASNAAKALTNVPGAATVTPLKPTPDGDVLVATAFSATAPQDASTTGLVNRLKDETLPEAVSGTAAHGYVTGTTAAQVDFLDILSARLPLIIATVVALAFLIILIVFRGILVALKAAALNVLSITASYGVVVAVFQWGWGGPALGVSGTVPIESYVPMMMFAIVFGLSMDYEIFLLSRVHEAWLRTADAKGSVAHALEITARVITCAALIMVSVFAAFIASNNIVVKMLGLGLAVSVLIDATVVRLLLVPAVMTLLGHRAWWTPRWLDRILPHLDVEGEDTPDSGRRSGAP

Samples

Sample ID Description Type Environment
1 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
2 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
3 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
4 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
5 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
6 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
7 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
8 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
9 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
10 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
11 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
12 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
13 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
14 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
15 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
16 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
17 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
18 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
19 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
20 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
21 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
22 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
23 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
24 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
25 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
26 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
27 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
28 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
29 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
30 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
31 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
32 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
33 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
34 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
35 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
36 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
37 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
38 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
39 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
40 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
41 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
42 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
43 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
44 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
45 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
46 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
47 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
48 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
49 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
50 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
51 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
52 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
53 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
54 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
55 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
56 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
57 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
58 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
59 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
60 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
61 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
62 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
63 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
64 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
65 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
66 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
67 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
68 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
69 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
70 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
71 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
72 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
73 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
74 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
75 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
76 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
77 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
78 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
79 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
80 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
81 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
82 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
83 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
84 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
85 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
86 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
87 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
88 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
89 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
90 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
91 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
92 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
93 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
94 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
95 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
96 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
97 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
98 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
99 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
100 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
101 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
102 3300053739 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 endosphere Metagenome Endosphere
103 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
104 8025478263 Streptomyces telluris AA8 Isolate Rhizosphere
105 2508501039 Frankia saprophytica CN3 Isolate Nodule
106 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
107 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
108 2643221548 Streptomyces sp. Root55 Isolate Unclassified
109 2643221578 Streptomyces sp. Root63 Isolate Unclassified
110 2643221587 Streptomyces sp. Root66D1 Isolate Unclassified
111 2643221647 Streptomyces sp. Root369 Isolate Unclassified
112 2643221670 Streptomyces sp. Root431 Isolate Unclassified
113 2643221673 Streptomyces sp. Root1295 Isolate Unclassified
114 2643221677 Streptomyces sp. Root1304 Isolate Unclassified
115 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
116 2643221682 Streptomyces sp. Root1319 Isolate Unclassified
117 2643221714 Streptomyces sp. Root264 Isolate Unclassified
118 2687453737 Frankia sp. BMG5.36 Isolate Nodule
119 2784746763 Streptomyces ossamyceticus SAI-001 Isolate Unclassified
120 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
121 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
122 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
123 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
124 2808606982 Streptomyces sp. SLBN-118 Isolate Unclassified
125 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
126 2818991472 Kitasatospora viridis DSM 44826 Isolate Rhizosphere
127 2852635781 Streptomyces sp. AK010 Isolate Rhizosphere
128 2862382967 Streptomyces scabiei NRRL B-2795 Isolate Nodule
129 2863404153 Streptomyces scabiei SAI-025 (Annotation) (version 2) Isolate Unclassified
130 2867428634 Streptomyces sp. RP5T Isolate Unclassified
131 2867475112 Streptomyces sp. TM32 Isolate Unclassified
132 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
133 2918501144 Streptomyces sp. PvR006 Isolate Rhizosphere
134 2919468124 Streptomyces sp. 3330 Isolate Rhizosphere
135 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
136 2946072368 Streptomyces achromogenes W4I19-2 Isolate Rhizosphere
137 2947224130 Streptomyces afghaniensis W1I20 Isolate Rhizosphere
138 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
139 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
140 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
141 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
142 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
143 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
144 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
145 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
146 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
147 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
148 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
149 2966598605 Kitasatospora papulosa SLBN-177 Isolate Rhizosphere
150 2990059506 Streptomyces sp. CAP261 Isolate Unclassified
151 2995463766 Streptacidiphilus fuscans NEAU-YB345 Isolate Unclassified
152 2997451912 Streptomyces piniterrae jys28 Isolate Rhizosphere
153 8008558824 Streptomyces scabiei NRRL B-2795 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 72.58
Metatranscriptomes 0
Isolates 27.42

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.38
Nodule 2.69
Rhizoplane 0.54
Rhizosphere 63.98
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068856_100056606 3300005614 Bacteria 3870
2 Ga0068859_100000027 3300005617 Bacteria 182371
3 Ga0068859_100002749 3300005617 Bacteria 17839
4 Ga0068863_100026085 3300005841 Bacteria 5576
5 Ga0068858_100018529 3300005842 Bacteria 6518
6 Ga0068862_100000186 3300005844 Bacteria 68544
7 Ga0081455_10000480 3300005937 Bacteria 51756
8 Ga0070717_10003879 3300006028 Bacteria 10749
9 Ga0075363_100027376 3300006048 Bacteria 2922
10 Ga0075367_10002772 3300006178 Bacteria 8117
11 Ga0097620_100000027 3300006931 Bacteria 182371
12 Ga0097620_100002749 3300006931 Bacteria 17839
13 Ga0099826_10033056 3300006948 Bacteria 3718
14 Ga0105247_10001653 3300009101 Bacteria 15769
15 Ga0105248_10002589 3300009177 Bacteria 20118
16 Ga0182008_10000508 3300014497 Bacteria 29268
17 Ga0183367_1004 3300015688 Bacteria 716880
18 Ga0207426_1001133 3300025302 Bacteria 24068
19 Ga0207692_10014377 3300025898 Bacteria 3457
20 Ga0207710_10000916 3300025900 Bacteria 15779
21 Ga0207664_10002515 3300025929 Bacteria 12125
22 Ga0207664_10005577 3300025929 Bacteria 8614
23 Ga0207665_10021395 3300025939 Bacteria 4253
24 Ga0207711_10020717 3300025941 Bacteria 5487
25 Ga0207641_10025867 3300026088 Bacteria 4840
26 Ga0268265_10000206 3300028380 Bacteria 68565
27 Ga0307517_10004488 3300028786 Bacteria 21422
28 Ga0307517_10005922 3300028786 Bacteria 18243
29 Ga0307515_10000050 3300028794 Bacteria 275624
30 Ga0307511_10003725 3300030521 Bacteria 15585
31 Ga0307511_10011907 3300030521 Bacteria 8556
32 Ga0307512_10000766 3300030522 Bacteria 47681
33 Ga0265327_10006048 3300031251 Bacteria 9818
34 Ga0307513_10011364 3300031456 Bacteria 11071
35 Ga0307513_10032411 3300031456 Bacteria 5893
36 Ga0307509_10017788 3300031507 Bacteria 8167
37 Ga0307509_10021082 3300031507 Bacteria 7377
38 Ga0307508_10007850 3300031616 Bacteria 9907
39 Ga0307508_10008642 3300031616 Bacteria 9401
40 Ga0307514_10002314 3300031649 Bacteria 20060
41 Ga0307516_10002791 3300031730 Bacteria 23053
42 Ga0307516_10024985 3300031730 Bacteria 6091
43 Ga0307507_10000003 3300033179 Bacteria 371707
44 Ga0307507_10022845 3300033179 Bacteria 6890
45 Ga0307507_10052637 3300033179 Bacteria 3899
46 Ga0307510_10001630 3300033180 Bacteria 24885
47 Ga0307510_10003092 3300033180 Bacteria 19240
48 Ga0316584_0010644 3300036712 Bacteria 6437
49 Ga0373925_0003067 3300037068 Bacteria 13130
50 Ga0395898_0089668 3300037466 Bacteria 2959
51 Ga0451853_2185812 3300041512 Bacteria 11039
52 Ga0439448_0004056 3300042005 Bacteria 4114
53 Ga0439455_0002448 3300042012 Bacteria 3377
54 Ga0450903_000063 3300042138 Bacteria 21886
55 Ga0439458_0000505 3300042157 Bacteria 9982
56 Ga0466969_0005150 3300044656 Bacteria 6951
57 Ga0466969_0015852 3300044656 Bacteria 3950
58 Ga0466969_0020627 3300044656 Bacteria 3411
59 Ga0466972_0010147 3300044658 Bacteria 4731
60 Ga0466966_0006747 3300044684 Bacteria 7602
61 Ga0466961_0030857 3300044693 Bacteria 3444
62 Ga0466971_0001964 3300044719 Bacteria 8708
63 Ga0466971_0013206 3300044719 Bacteria 3625
64 Ga0466960_0000484 3300044901 Bacteria 13571
65 Ga0466959_0003323 3300045049 Bacteria 10502
66 Ga0466959_0004881 3300045049 Bacteria 9078
67 Ga0466958_0024102 3300045836 Bacteria 3578
68 Ga0495592_0004035 3300046454 Bacteria 10668
69 Ga0495629_0002673 3300046459 Bacteria 13640
70 Ga0495629_0006031 3300046459 Bacteria 9009
71 Ga0495629_0045566 3300046459 Bacteria 3077
72 Ga0495638_0016911 3300046460 Bacteria 4876
73 Ga0495651_0002583 3300046462 Bacteria 14000
74 Ga0495651_0064565 3300046462 Bacteria 2798
75 Ga0495662_0004704 3300046476 Bacteria 6835
76 Ga0495664_0004244 3300046477 Bacteria 7820
77 Ga0495628_0023563 3300046516 Bacteria 5051
78 Ga0495645_0015107 3300046543 Bacteria 5488
79 Ga0495634_0002610 3300046642 Bacteria 14829
80 Ga0495625_0005464 3300046660 Bacteria 11580
81 Ga0495635_0009165 3300046663 Bacteria 6909
82 Ga0495657_0001323 3300046675 Bacteria 21588
83 Ga0495657_0025874 3300046675 Bacteria 4163
84 Ga0495623_0005844 3300046679 Bacteria 8021
85 Ga0495646_0003372 3300046680 Bacteria 9934
86 Ga0495658_0011922 3300046683 Bacteria 4387
87 Ga0495613_0000273 3300046689 Bacteria 48007
88 Ga0495613_0016793 3300046689 Bacteria 5451
89 Ga0495670_0010851 3300046691 Bacteria 4477
90 Ga0495600_0008902 3300046809 Bacteria 6184
91 Ga0495600_0010375 3300046809 Bacteria 5781
92 Ga0495581_0001816 3300047315 Bacteria 11947
93 Ga0495604_0000551 3300047317 Bacteria 32966
94 Ga0495604_0014049 3300047317 Bacteria 6384
95 Ga0495687_008386 3300047443 Bacteria 5920
96 Ga0495675_0025148 3300047444 Bacteria 3797
97 Ga0495681_0001152 3300047470 Bacteria 20018
98 Ga0495614_0004950 3300048089 Bacteria 6009
99 Ga0496112_0012932 3300048915 Bacteria 7689
100 Ga0496116_0000344 3300048919 Bacteria 73966
101 Ga0496117_0005433 3300048920 Bacteria 13389
102 Ga0496118_0003432 3300048921 Bacteria 19955
103 Ga0496119_0001854 3300048922 Bacteria 24393
104 Ga0496119_0002047 3300048922 Bacteria 22827
105 Ga0496120_0000742 3300048923 Bacteria 47550
106 Ga0501031_0005537 3300049568 Bacteria 8221
107 Ga0501032_0031942 3300049569 Bacteria 3609
108 Ga0501033_0013770 3300049570 Bacteria 6152
109 Ga0501034_0015539 3300049571 Bacteria 7819
110 Ga0501034_0143366 3300049571 Bacteria 2367
111 Ga0501036_0024303 3300049572 Bacteria 5108
112 Ga0501037_0004120 3300049573 Bacteria 10541
113 Ga0501038_0012432 3300049574 Bacteria 7779
114 Ga0501038_0051979 3300049574 Bacteria 3533
115 Ga0501043_0032197 3300049579 Bacteria 4121
116 Ga0501043_0060350 3300049579 Bacteria 2977
117 Ga0501046_0010668 3300049580 Bacteria 7879
118 Ga0501047_0012200 3300049581 Bacteria 8135
119 Ga0501047_0036105 3300049581 Bacteria 4775
120 Ga0501047_0044882 3300049581 Bacteria 4272
121 Ga0501048_0023457 3300049582 Bacteria 4507
122 Ga0501035_0013111 3300049822 Bacteria 7649
123 Ga0501035_0019217 3300049822 Bacteria 6290
124 Ga0501044_0054187 3300049823 Bacteria 4124
125 Ga0501044_0055565 3300049823 Bacteria 4066
126 nmdc:mga06z11_14403_c1 3300050494 Bacteria 3502
127 Ga0495601_0005928 3300053077 Bacteria 7127
128 Ga0500578_0019986 3300053086 Bacteria 4302
129 Ga0500583_0005493 3300053092 Bacteria 4255
130 Ga0500569_001470 3300053109 Bacteria 4458
131 Ga0500652_001185 3300053131 Bacteria 8310
132 Ga0500573_0005989 3300053140 Bacteria 6547
133 Ga0500587_001492 3300053739 Bacteria 3317
134 Ga0466962_0007253 3300061719 Bacteria 5311
135 Ga0466962_0026671 3300061719 Bacteria 2773
136 8025480280 8025478263 Bacteria 8209203
137 2508674657 2508501039 Bacteria 9978592
138 2585303166 2582581313 Bacteria 10042643
139 2585313872 2582581314 Bacteria 11452267
140 2643764997 2643221548 Bacteria 8053412
141 2643900363 2643221578 Bacteria 9213798
142 2643945928 2643221587 Bacteria 7586415
143 2644266889 2643221647 Bacteria 10741251
144 2644387185 2643221670 Bacteria 6497041
145 2644405413 2643221673 Bacteria 9196637
146 2644432717 2643221677 Bacteria 7584031
147 2644440520 2643221678 Bacteria 9540101
148 2644461163 2643221682 Bacteria 6743283
149 2644630911 2643221714 Bacteria 9015452
150 2689957723 2687453737 Bacteria 11203906
151 2785339122 2784746763 Bacteria 9783172
152 2785373992 2784746768 Bacteria 10036182
153 2786674235 2786546132 Bacteria 10419719
154 2808845817 2808606359 Bacteria 9866990
155 2808915655 2808606375 Bacteria 9466072
156 2808917052 2808606375 Bacteria 9466072
157 2811848819 2808606982 Bacteria 7791042
158 2812361721 2811994879 Bacteria 9313447
159 2819747656 2818991472 Bacteria 10089953
160 2852642980 2852635781 Bacteria 8251373
161 2862383969 2862382967 Bacteria 10317375
162 2863410799 2863404153 Bacteria 9672205
163 2867428933 2867428634 Bacteria 9590268
164 2867480027 2867475112 Bacteria 6909112
165 2877677172 2877676314 Bacteria 9512378
166 2918507810 2918501144 Bacteria 8668083
167 2919470688 2919468124 Bacteria 9133025
168 2946064444 2946064051 Bacteria 8957905
169 2946079637 2946072368 Bacteria 8999607
170 2947224385 2947224130 Bacteria 9938529
171 2954381880 2954380949 Bacteria 10050426
172 2954681178 2954673503 Bacteria 9685905
173 2954682979 2954682443 Bacteria 9862841
174 2954692704 2954691527 Bacteria 10720516
175 2954707777 2954701450 Bacteria 10834262
176 2954712359 2954711539 Bacteria 10867210
177 2954722305 2954721474 Bacteria 10456478
178 2954739544 2954731030 Bacteria 10243860
179 2954741193 2954740390 Bacteria 10229294
180 2954758371 2954749733 Bacteria 10366972
181 2954760204 2954759201 Bacteria 9358192
182 2966601689 2966598605 Bacteria 7676064
183 2990066906 2990059506 Bacteria 9321252
184 2995464585 2995463766 Bacteria 8577691
185 2997457471 2997451912 Bacteria 8492419
186 8008564851 8008558824 Bacteria 10610750
187 Ga0068856_100056606
188 Ga0068859_100000027
189 Ga0068859_100002749
190 Ga0068863_100026085
191 Ga0068858_100018529
192 Ga0068862_100000186
193 Ga0081455_10000480
194 Ga0070717_10003879
195 Ga0075363_100027376
196 Ga0075367_10002772
197 Ga0097620_100000027
198 Ga0097620_100002749
199 Ga0099826_10033056
200 Ga0105247_10001653
201 Ga0105248_10002589
202 Ga0182008_10000508
203 Ga0183367_1004
204 Ga0207426_1001133
205 Ga0207692_10014377
206 Ga0207710_10000916
207 Ga0207664_10002515
208 Ga0207664_10005577
209 Ga0207665_10021395
210 Ga0207711_10020717
211 Ga0207641_10025867
212 Ga0268265_10000206
213 Ga0307517_10004488
214 Ga0307517_10005922
215 Ga0307515_10000050
216 Ga0307511_10003725
217 Ga0307511_10011907
218 Ga0307512_10000766
219 Ga0265327_10006048
220 Ga0307513_10011364
221 Ga0307513_10032411
222 Ga0307509_10017788
223 Ga0307509_10021082
224 Ga0307508_10007850
225 Ga0307508_10008642
226 Ga0307514_10002314
227 Ga0307516_10002791
228 Ga0307516_10024985
229 Ga0307507_10000003
230 Ga0307507_10022845
231 Ga0307507_10052637
232 Ga0307510_10001630
233 Ga0307510_10003092
234 Ga0316584_0010644
235 Ga0373925_0003067
236 Ga0395898_0089668
237 Ga0451853_2185812
238 Ga0439448_0004056
239 Ga0439455_0002448
240 Ga0450903_000063
241 Ga0439458_0000505
242 Ga0466969_0005150
243 Ga0466969_0015852
244 Ga0466969_0020627
245 Ga0466972_0010147
246 Ga0466966_0006747
247 Ga0466961_0030857
248 Ga0466971_0001964
249 Ga0466971_0013206
250 Ga0466960_0000484
251 Ga0466959_0003323
252 Ga0466959_0004881
253 Ga0466958_0024102
254 Ga0495592_0004035
255 Ga0495629_0002673
256 Ga0495629_0006031
257 Ga0495629_0045566
258 Ga0495638_0016911
259 Ga0495651_0002583
260 Ga0495651_0064565
261 Ga0495662_0004704
262 Ga0495664_0004244
263 Ga0495628_0023563
264 Ga0495645_0015107
265 Ga0495634_0002610
266 Ga0495625_0005464
267 Ga0495635_0009165
268 Ga0495657_0001323
269 Ga0495657_0025874
270 Ga0495623_0005844
271 Ga0495646_0003372
272 Ga0495658_0011922
273 Ga0495613_0000273
274 Ga0495613_0016793
275 Ga0495670_0010851
276 Ga0495600_0008902
277 Ga0495600_0010375
278 Ga0495581_0001816
279 Ga0495604_0000551
280 Ga0495604_0014049
281 Ga0495687_008386
282 Ga0495675_0025148
283 Ga0495681_0001152
284 Ga0495614_0004950
285 Ga0496112_0012932
286 Ga0496116_0000344
287 Ga0496117_0005433
288 Ga0496118_0003432
289 Ga0496119_0001854
290 Ga0496119_0002047
291 Ga0496120_0000742
292 Ga0501031_0005537
293 Ga0501032_0031942
294 Ga0501033_0013770
295 Ga0501034_0015539
296 Ga0501034_0143366
297 Ga0501036_0024303
298 Ga0501037_0004120
299 Ga0501038_0012432
300 Ga0501038_0051979
301 Ga0501043_0032197
302 Ga0501043_0060350
303 Ga0501046_0010668
304 Ga0501047_0012200
305 Ga0501047_0036105
306 Ga0501047_0044882
307 Ga0501048_0023457
308 Ga0501035_0013111
309 Ga0501035_0019217
310 Ga0501044_0054187
311 Ga0501044_0055565
312 nmdc:mga06z11_14403_c1
313 Ga0495601_0005928
314 Ga0500578_0019986
315 Ga0500583_0005493
316 Ga0500569_001470
317 Ga0500652_001185
318 Ga0500573_0005989
319 Ga0500587_001492
320 Ga0466962_0007253
321 Ga0466962_0026671
322 8025480280
323 2508674657
324 2585303166
325 2585313872
326 2643764997
327 2643900363
328 2643945928
329 2644266889
330 2644387185
331 2644405413
332 2644432717
333 2644440520
334 2644461163
335 2644630911
336 2689957723
337 2785339122
338 2785373992
339 2786674235
340 2808845817
341 2808915655
342 2808917052
343 2811848819
344 2812361721
345 2819747656
346 2852642980
347 2862383969
348 2863410799
349 2867428933
350 2867480027
351 2877677172
352 2918507810
353 2919470688
354 2946064444
355 2946079637
356 2947224385
357 2954381880
358 2954681178
359 2954682979
360 2954692704
361 2954707777
362 2954712359
363 2954722305
364 2954739544
365 2954741193
366 2954758371
367 2954760204
368 2966601689
369 2990066906
370 2995464585
371 2997457471
372 8008564851

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03176

MMPL

MMPL family

90

432

0.89

PF03176

MMPL

MMPL family

498

774

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
7nvh-assembly1.cif.gz_A cryo-em structure of the mycolic acid transporter mmpl3 from m. tuberculosis 0.8188 19 708
7k8b-assembly1.cif.gz_A cryoem structure of a trehalose monomycolate transporter in lipid nanodiscs 0.8127 19 711
8qkk-assembly1.cif.gz_A cryo-em structure of mmpl3 from mycobacterium smegmatis reconstituted into peptidiscs 0.808 19 695
7n6b-assembly1.cif.gz_A structure of mmpl3 reconstituted into lipid nanodisc in the tmm bound state 0.8076 19 711
6n40-assembly1.cif.gz_A crystal structure of mmpl3 from mycobacterium smegmatis 0.8057 19 703
ID Description Score Start End Superfamily
af_P9WJV5_535_729_1.20.1640.10 Mainly Alpha;Up-down Bundle;Multidrug efflux transporter AcrB transmembrane fold;Multidrug efflux transporter AcrB transmembrane domain 0.9673 504 690 1.20.1640.10
af_Q4DFK7_607_812_1.20.1640.10 Mainly Alpha;Up-down Bundle;Multidrug efflux transporter AcrB transmembrane fold;Multidrug efflux transporter AcrB transmembrane domain 0.9595 504 687 1.20.1640.10
af_P9WJT9_505_699_1.20.1640.10 Mainly Alpha;Up-down Bundle;Multidrug efflux transporter AcrB transmembrane fold;Multidrug efflux transporter AcrB transmembrane domain 0.9591 504 694 1.20.1640.10
af_P9WJT9_146_343_1.20.1640.10 Mainly Alpha;Up-down Bundle;Multidrug efflux transporter AcrB transmembrane fold;Multidrug efflux transporter AcrB transmembrane domain 0.9454 190 333 1.20.1640.10
af_O06546_195_417_1.20.1640.10 Mainly Alpha;Up-down Bundle;Multidrug efflux transporter AcrB transmembrane fold;Multidrug efflux transporter AcrB transmembrane domain 0.9338 503 694 1.20.1640.10
ID Description Score Start End GO Terms
AF-A0A7Z1SBG8-F1-model_v4 SSD domain-containing protein 0.9687 528 710 GO:0005886
AF-A0A7Z1SBG8-F1-model_v4 SSD domain-containing protein 0.9584 528 710 GO:0005886
AF-A0A4V1FFE7-F1-model_v4 SSD domain-containing protein 0.9573 511 718 GO:0005886
AF-A0A6B2DKC1-F1-model_v4 MMPL family transporter 0.9431 188 334 GO:0005886
AF-A0A7X7IAG3-F1-model_v4 MMPL family transporter 0.9407 468 701 GO:0005886

Map