F286576
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 186 | 159 | 142 | 222 |
Family's Representative Sequence
| Representative Sequence | 3300047317|Ga0495604_0019706|Ga0495604_0019706_1112_1831 |
| Length | 239 |
| Sequence | MLDKLLYRPPVRILAVQAAAPIVTYIRVSTSSQGRSGLGIEAQRHALAHFATSGGYEVVREFVEVETGKGSDALDRRPQLKAALTAARKLRCHVGVAKLDRLSRDVHFISGLMAHKVPFLVAELGPDVDPFVLHLFAALAEKERALISTRTRQALSAAKARGVALGNPKLHVARKNAVEAVKTEADRYAANVLPIIREAQKAGANTLRQLADALNARGIPTARGGQWYAQSVANILERA |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2508501128 | Bradyrhizobium sp. ARR65 | Isolate | Nodule |
| 2 | 2513237095 | Bradyrhizobium diazoefficiens USDA 122 | Isolate | Nodule |
| 3 | 2513237102 | Bradyrhizobium japonicum USDA 135 | Isolate | Nodule |
| 4 | 2513237104 | Bradyrhizobium sp. EC3.3 | Isolate | Nodule |
| 5 | 2513237146 | Rhizobium mongolense USDA 1844 (Illumina) | Isolate | Nodule |
| 6 | 2517093001 | Bradyrhizobium japonicum USDA 124 | Isolate | Nodule |
| 7 | 2528768022 | Bradyrhizobium japonicum USDA 123 | Isolate | Nodule |
| 8 | 2599185170 | Rhizobium mongolense USDA 1844 (PacBio) | Isolate | Nodule |
| 9 | 2617270735 | Bradyrhizobium shewense ERR11 | Isolate | Nodule |
| 10 | 2791355266 | Rhizobium sp. L43 | Isolate | Nodule |
| 11 | 2824661429 | Bradyrhizobium sp. HAMBI 2115 | Isolate | Unclassified |
| 12 | 2824746037 | Bradyrhizobium sp. HAMBI 2299 | Isolate | Unclassified |
| 13 | 2838035591 | Rhizobium mongolense SEMIA 4087 | Isolate | Nodule |
| 14 | 2874645413 | Bradyrhizobium canariense UBMA122 | Isolate | Nodule |
| 15 | 2881364244 | Bradyrhizobium sp. RP6 | Isolate | Unclassified |
| 16 | 2903748898 | Bradyrhizobium uaiense UFLA 03-164 | Isolate | Nodule |
| 17 | 2903768456 | Bradyrhizobium sp. Leo121 | Isolate | Unclassified |
| 18 | 2932809354 | Bradyrhizobium sp. S3.5.5 | Isolate | Nodule |
| 19 | 2932818245 | Bradyrhizobium sp. S3.9.1 | Isolate | Nodule |
| 20 | 2935616580 | Bradyrhizobium sp. RT7a | Isolate | Nodule |
| 21 | 2935648319 | Bradyrhizobium sp. JR4.3 | Isolate | Nodule |
| 22 | 2935656913 | Bradyrhizobium sp. JR5.3 | Isolate | Nodule |
| 23 | 2935760218 | Bradyrhizobium sp. LA7.1 | Isolate | Nodule |
| 24 | 2935810662 | Bradyrhizobium sp. RT3a | Isolate | Nodule |
| 25 | 2935855204 | Bradyrhizobium sp. RT7b | Isolate | Nodule |
| 26 | 2935864058 | Bradyrhizobium sp. RT9a | Isolate | Nodule |
| 27 | 2935873716 | Bradyrhizobium sp. RT9b | Isolate | Nodule |
| 28 | 2935908558 | Bradyrhizobium sp. F1.1.1 | Isolate | Nodule |
| 29 | 2935926038 | Bradyrhizobium sp. F1.2.1 | Isolate | Nodule |
| 30 | 2935934488 | Bradyrhizobium sp. F1.2.2 | Isolate | Nodule |
| 31 | 2935942939 | Bradyrhizobium sp. F1.2.6 | Isolate | Nodule |
| 32 | 2935951376 | Bradyrhizobium sp. F1.2.8 | Isolate | Nodule |
| 33 | 2935967501 | Bradyrhizobium sp. F1.6.2 | Isolate | Nodule |
| 34 | 2935984226 | Bradyrhizobium sp. i1.15.2 | Isolate | Nodule |
| 35 | 2936011229 | Bradyrhizobium sp. JR1.1 | Isolate | Nodule |
| 36 | 2936019824 | Bradyrhizobium sp. JR1.5 | Isolate | Nodule |
| 37 | 2936028420 | Bradyrhizobium sp. JR1.7 | Isolate | Nodule |
| 38 | 2936046547 | Bradyrhizobium sp. JR3.12 | Isolate | Nodule |
| 39 | 3300003320 | Sugarcane root Sample H2 | Metagenome | Unclassified |
| 40 | 3300003659 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 | Metagenome | Rhizosphere |
| 41 | 3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Metagenome | Rhizosphere |
| 42 | 3300005339 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG | Metagenome | Rhizosphere |
| 43 | 3300005340 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG | Metagenome | Rhizosphere |
| 44 | 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Metagenome | Rhizosphere |
| 45 | 3300005356 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG | Metagenome | Rhizosphere |
| 46 | 3300005364 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG | Metagenome | Rhizosphere |
| 47 | 3300005365 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG | Metagenome | Rhizosphere |
| 48 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 49 | 3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Metagenome | Rhizosphere |
| 50 | 3300005440 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG | Metagenome | Rhizosphere |
| 51 | 3300005441 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG | Metagenome | Rhizosphere |
| 52 | 3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Metagenome | Rhizosphere |
| 53 | 3300005459 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 | Metagenome | Rhizosphere |
| 54 | 3300005466 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG | Metagenome | Rhizosphere |
| 55 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 56 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 57 | 3300005543 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG | Metagenome | Rhizosphere |
| 58 | 3300005545 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG | Metagenome | Rhizosphere |
| 59 | 3300005547 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG | Metagenome | Rhizosphere |
| 60 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 61 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 62 | 3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Metagenome | Rhizosphere |
| 63 | 3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Metagenome | Rhizosphere |
| 64 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 65 | 3300005615 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG | Metagenome | Rhizosphere |
| 66 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 67 | 3300005718 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 | Metagenome | Rhizosphere |
| 68 | 3300005719 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 | Metagenome | Rhizosphere |
| 69 | 3300005983 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 | Metagenome | Rhizosphere |
| 70 | 3300006175 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG | Metagenome | Rhizosphere |
| 71 | 3300006358 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 | Metagenome | Rhizosphere |
| 72 | 3300006881 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 | Metagenome | Rhizosphere |
| 73 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 74 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 76 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 77 | 3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Metagenome | Rhizosphere |
| 78 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 79 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 80 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 81 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 82 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 83 | 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Metagenome | Rhizosphere |
| 84 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 85 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 86 | 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Metagenome | Rhizosphere |
| 87 | 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Metagenome | Rhizosphere |
| 88 | 3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Metagenome | Rhizosphere |
| 89 | 3300021361 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 | Metagenome | Rhizosphere |
| 90 | 3300025294 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) | Metagenome | Endosphere |
| 91 | 3300025899 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 92 | 3300025911 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 93 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 94 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 95 | 3300025915 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 96 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 97 | 3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 98 | 3300025927 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 99 | 3300025928 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 100 | 3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 101 | 3300025935 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 102 | 3300025936 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 103 | 3300025937 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 104 | 3300025940 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 105 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 106 | 3300025960 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 107 | 3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 108 | 3300025981 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 109 | 3300025986 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 110 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 111 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 112 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 113 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 114 | 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 115 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 116 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 117 | 3300031090 | Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 118 | 3300031239 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG | Metagenome | Rhizosphere |
| 119 | 3300031251 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG | Metagenome | Rhizosphere |
| 120 | 3300034816 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_3 | Metagenome | Rhizosphere |
| 121 | 3300034957 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_2 | Metagenome | Rhizosphere |
| 122 | 3300035112 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 | Metagenome | Rhizosphere |
| 123 | 3300035114 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 | Metagenome | Rhizosphere |
| 124 | 3300035691 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 | Metagenome | Rhizosphere |
| 125 | 3300036401 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 126 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 127 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 128 | 3300039437 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 | Metagenome | Unclassified |
| 129 | 3300039447 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 | Metagenome | Rhizosphere |
| 130 | 3300046455 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere | Metagenome | Rhizosphere |
| 131 | 3300046522 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere | Metagenome | Rhizosphere |
| 132 | 3300046674 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere | Metagenome | Rhizosphere |
| 133 | 3300046680 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere | Metagenome | Rhizosphere |
| 134 | 3300046684 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere | Metagenome | Rhizosphere |
| 135 | 3300047317 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere | Metagenome | Rhizosphere |
| 136 | 3300047321 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere | Metagenome | Rhizosphere |
| 137 | 3300047673 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere | Metagenome | Rhizosphere |
| 138 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 139 | 3300048909 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 | Metagenome | Rhizoplane |
| 140 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 141 | 3300048915 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 | Metagenome | Rhizoplane |
| 142 | 3300048926 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled | Metagenome | Unclassified |
| 143 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 144 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 145 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 146 | 3300050511 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation | Metagenome | Rhizosphere |
| 147 | 3300053087 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere | Metagenome | Endosphere |
| 148 | 3300053119 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere | Metagenome | Endosphere |
| 149 | 3300053131 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere | Metagenome | Endosphere |
| 150 | 3300053136 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere | Metagenome | Endosphere |
| 151 | 3300053158 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere | Metagenome | Endosphere |
| 152 | 3300053161 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere | Metagenome | Endosphere |
| 153 | 3300060353 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 | Metagenome | Rhizosphere |
| 154 | 8019576017 | Bradyrhizobium sp. i1.7.7 | Isolate | Nodule |
| 155 | 8019597564 | Bradyrhizobium sp. i1.3.6 | Isolate | Nodule |
| 156 | 8019608314 | Bradyrhizobium sp. i1.3.1 | Isolate | Nodule |
| 157 | 8019648815 | Bradyrhizobium sp. GM24.11 | Isolate | Nodule |
| 158 | 8019687851 | Bradyrhizobium sp. F1.13.4 | Isolate | Nodule |
| 159 | 8056673599 | Bradyrhizobium hereditatis WSM 1738 | Isolate | Nodule |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 75.81 |
| Metatranscriptomes | 0.54 |
| Isolates | 23.66 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 4.3 |
| Nodule | 21.51 |
| Rhizoplane | 2.15 |
| Rhizosphere | 68.28 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 3.76 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | rootH2_10060596 | 3300003320 | Bacteria | 11566 |
| 2 | JGI25404J52841_10001734 | 3300003659 | Bacteria | 3942 |
| 3 | Ga0068868_100250809 | 3300005338 | Bacteria | 1490 |
| 4 | Ga0070660_100256432 | 3300005339 | Bacteria | 1427 |
| 5 | Ga0070689_100116294 | 3300005340 | Bacteria | 2132 |
| 6 | Ga0070668_100026594 | 3300005347 | Bacteria | 4392 |
| 7 | Ga0070674_100018021 | 3300005356 | Bacteria | 4454 |
| 8 | Ga0070674_100027827 | 3300005356 | Bacteria | 3707 |
| 9 | Ga0070673_100417451 | 3300005364 | Bacteria | 1202 |
| 10 | Ga0070688_100033098 | 3300005365 | Bacteria | 3123 |
| 11 | Ga0070667_100029752 | 3300005367 | Bacteria | 4553 |
| 12 | Ga0070714_100542146 | 3300005435 | Bacteria | 1113 |
| 13 | Ga0070705_100642348 | 3300005440 | Unclassified | 826 |
| 14 | Ga0070700_100602232 | 3300005441 | Unclassified | 861 |
| 15 | Ga0070663_100020063 | 3300005455 | Bacteria | 4419 |
| 16 | Ga0070663_100130665 | 3300005455 | Bacteria | 1906 |
| 17 | Ga0068867_100054420 | 3300005459 | Bacteria | 2957 |
| 18 | Ga0070685_10030687 | 3300005466 | Bacteria | 2997 |
| 19 | Ga0070684_100153021 | 3300005535 | Bacteria | 2090 |
| 20 | Ga0068853_100018055 | 3300005539 | Bacteria | 5832 |
| 21 | Ga0068853_100434167 | 3300005539 | Unclassified | 1233 |
| 22 | Ga0070672_100550802 | 3300005543 | Bacteria | 1001 |
| 23 | Ga0070672_100743701 | 3300005543 | Bacteria | 860 |
| 24 | Ga0070695_100307270 | 3300005545 | Unclassified | 1174 |
| 25 | Ga0070693_100129428 | 3300005547 | Bacteria | 1576 |
| 26 | Ga0070665_100069007 | 3300005548 | Bacteria | 3543 |
| 27 | Ga0068855_100141973 | 3300005563 | Bacteria | 2736 |
| 28 | Ga0068855_100921619 | 3300005563 | Unclassified | 922 |
| 29 | Ga0070664_100145575 | 3300005564 | Bacteria | 2089 |
| 30 | Ga0070664_100566344 | 3300005564 | Unclassified | 1051 |
| 31 | Ga0068854_101038733 | 3300005578 | Bacteria | 727 |
| 32 | Ga0068856_100012470 | 3300005614 | Bacteria | 8230 |
| 33 | Ga0068856_100785727 | 3300005614 | Bacteria | 972 |
| 34 | Ga0070702_100317017 | 3300005615 | Bacteria | 1085 |
| 35 | Ga0068852_100188318 | 3300005616 | Bacteria | 1945 |
| 36 | Ga0068852_100364997 | 3300005616 | Bacteria | 1413 |
| 37 | Ga0068866_10123292 | 3300005718 | Bacteria | 1463 |
| 38 | Ga0068861_100041260 | 3300005719 | Bacteria | 3456 |
| 39 | Ga0081540_1001135 | 3300005983 | Bacteria | 23512 |
| 40 | Ga0081540_1004078 | 3300005983 | Bacteria | 11307 |
| 41 | Ga0070712_100159235 | 3300006175 | Bacteria | 1742 |
| 42 | Ga0070712_100674762 | 3300006175 | Bacteria | 879 |
| 43 | Ga0068871_100642673 | 3300006358 | Bacteria | 968 |
| 44 | Ga0068865_100181915 | 3300006881 | Bacteria | 1619 |
| 45 | Ga0105240_10002281 | 3300009093 | Bacteria | 31075 |
| 46 | Ga0111539_10678500 | 3300009094 | Unclassified | 1199 |
| 47 | Ga0105245_10159825 | 3300009098 | Bacteria | 2137 |
| 48 | Ga0105243_10017605 | 3300009148 | Bacteria | 5404 |
| 49 | Ga0105241_10000387 | 3300009174 | Bacteria | 33305 |
| 50 | Ga0105237_10025797 | 3300009545 | Bacteria | 6009 |
| 51 | Ga0105238_10007458 | 3300009551 | Bacteria | 10959 |
| 52 | Ga0105238_10030911 | 3300009551 | Bacteria | 5450 |
| 53 | Ga0105238_10102000 | 3300009551 | Unclassified | 2851 |
| 54 | Ga0105249_10187014 | 3300009553 | Bacteria | 2019 |
| 55 | Ga0105239_10016238 | 3300010375 | Bacteria | 8236 |
| 56 | Ga0105239_10395634 | 3300010375 | Bacteria | 1563 |
| 57 | Ga0105239_10414775 | 3300010375 | Bacteria | 1525 |
| 58 | Ga0157370_10052257 | 3300013104 | Bacteria | 3901 |
| 59 | Ga0157378_10074320 | 3300013297 | Bacteria | 3058 |
| 60 | Ga0163162_10108481 | 3300013306 | Bacteria | 2872 |
| 61 | Ga0163162_10646248 | 3300013306 | Bacteria | 1182 |
| 62 | Ga0163163_10317635 | 3300014325 | Unclassified | 1611 |
| 63 | Ga0163163_10446616 | 3300014325 | Bacteria | 1353 |
| 64 | Ga0157380_10108828 | 3300014326 | Bacteria | 2324 |
| 65 | Ga0157376_10027295 | 3300014969 | Bacteria | 4523 |
| 66 | Ga0157376_10090449 | 3300014969 | Bacteria | 2649 |
| 67 | Ga0163161_10056393 | 3300017792 | Bacteria | 2853 |
| 68 | Ga0213872_10080972 | 3300021361 | Unclassified | 1459 |
| 69 | Ga0209025_1063088 | 3300025294 | Bacteria | 1370 |
| 70 | Ga0207642_10002762 | 3300025899 | Bacteria | 5480 |
| 71 | Ga0207654_10000216 | 3300025911 | Bacteria | 35426 |
| 72 | Ga0207695_10000430 | 3300025913 | Bacteria | 92372 |
| 73 | Ga0207671_10014531 | 3300025914 | Bacteria | 6217 |
| 74 | Ga0207693_10107565 | 3300025915 | Bacteria | 2188 |
| 75 | Ga0207693_10336554 | 3300025915 | Bacteria | 1181 |
| 76 | Ga0207693_10404789 | 3300025915 | Bacteria | 1067 |
| 77 | Ga0207657_10239797 | 3300025919 | Bacteria | 1448 |
| 78 | Ga0207694_10002824 | 3300025924 | Bacteria | 14013 |
| 79 | Ga0207694_10138205 | 3300025924 | Unclassified | 1958 |
| 80 | Ga0207687_10670375 | 3300025927 | Bacteria | 878 |
| 81 | Ga0207700_10543749 | 3300025928 | Bacteria | 1030 |
| 82 | Ga0207700_10857033 | 3300025928 | Bacteria | 813 |
| 83 | Ga0207690_10557768 | 3300025932 | Bacteria | 932 |
| 84 | Ga0207709_10007106 | 3300025935 | Bacteria | 6253 |
| 85 | Ga0207670_10061057 | 3300025936 | Bacteria | 2571 |
| 86 | Ga0207669_10380771 | 3300025937 | Bacteria | 1099 |
| 87 | Ga0207691_10690956 | 3300025940 | Bacteria | 861 |
| 88 | Ga0207691_10819803 | 3300025940 | Bacteria | 781 |
| 89 | Ga0207667_10064975 | 3300025949 | Bacteria | 3807 |
| 90 | Ga0207651_10074861 | 3300025960 | Bacteria | 2413 |
| 91 | Ga0207668_10082436 | 3300025972 | Bacteria | 2336 |
| 92 | Ga0207640_11025117 | 3300025981 | Bacteria | 727 |
| 93 | Ga0207658_10245420 | 3300025986 | Bacteria | 1519 |
| 94 | Ga0207639_10011643 | 3300026041 | Bacteria | 6112 |
| 95 | Ga0207678_10022951 | 3300026067 | Bacteria | 5460 |
| 96 | Ga0207702_10000006 | 3300026078 | Bacteria | 346370 |
| 97 | Ga0207702_10486931 | 3300026078 | Bacteria | 1201 |
| 98 | Ga0207641_10512326 | 3300026088 | Bacteria | 1166 |
| 99 | Ga0207648_10016699 | 3300026089 | Bacteria | 6698 |
| 100 | Ga0207698_10382790 | 3300026142 | Bacteria | 1339 |
| 101 | Ga0268266_10074100 | 3300028379 | Bacteria | 2955 |
| 102 | Ga0268266_10094931 | 3300028379 | Bacteria | 2619 |
| 103 | Ga0265760_10102674 | 3300031090 | Unclassified | 905 |
| 104 | Ga0265328_10002276 | 3300031239 | Bacteria | 8644 |
| 105 | Ga0265328_10004177 | 3300031239 | Bacteria | 6297 |
| 106 | Ga0265327_10007208 | 3300031251 | Bacteria | 8638 |
| 107 | Ga0373930_0030381 | 3300034816 | Unclassified | 1109 |
| 108 | Ga0373938_0071216 | 3300034957 | Unclassified | 831 |
| 109 | Ga0373932_0009098 | 3300035112 | Bacteria | 2383 |
| 110 | Ga0373939_0042861 | 3300035114 | Bacteria | 1370 |
| 111 | Ga0373931_0494098 | 3300035691 | Bacteria | 788 |
| 112 | Ga0373937_0279067 | 3300036401 | Unclassified | 1578 |
| 113 | Ga0395900_0101449 | 3300037418 | Bacteria | 2956 |
| 114 | Ga0395901_0549821 | 3300038443 | Bacteria | 1170 |
| 115 | Ga0436365_1305953 | 3300039437 | Bacteria | 4326 |
| 116 | Ga0436361_0439775 | 3300039447 | Unclassified | 2782 |
| 117 | Ga0495603_0067832 | 3300046455 | Bacteria | 2099 |
| 118 | Ga0495643_0012435 | 3300046522 | Bacteria | 5135 |
| 119 | Ga0495588_0057438 | 3300046674 | Bacteria | 2010 |
| 120 | Ga0495646_0000601 | 3300046680 | Bacteria | 19579 |
| 121 | Ga0495669_0011881 | 3300046684 | Bacteria | 3703 |
| 122 | Ga0495604_0019706 | 3300047317 | Bacteria | 5398 |
| 123 | Ga0495676_0241637 | 3300047321 | Bacteria | 1236 |
| 124 | Ga0495593_0093146 | 3300047673 | Bacteria | 1551 |
| 125 | Ga0496104_0592448 | 3300048907 | Bacteria | 1019 |
| 126 | Ga0496106_0518536 | 3300048909 | Unclassified | 957 |
| 127 | Ga0496109_0177673 | 3300048912 | Bacteria | 1999 |
| 128 | Ga0496112_0008018 | 3300048915 | Bacteria | 9421 |
| 129 | Ga0496123_0118353 | 3300048926 | Bacteria | 1496 |
| 130 | Ga0501036_0630331 | 3300049572 | Bacteria | 888 |
| 131 | Ga0501047_0029770 | 3300049581 | Bacteria | 5263 |
| 132 | Ga0501044_0004456 | 3300049823 | Bacteria | 15667 |
| 133 | Ga0501044_0414828 | 3300049823 | Bacteria | 1257 |
| 134 | nmdc:mga08y16_517868_c1 | 3300050511 | Bacteria | 1210 |
| 135 | Ga0500643_000098 | 3300053087 | Bacteria | 91878 |
| 136 | Ga0500595_041736 | 3300053119 | Unclassified | 1473 |
| 137 | Ga0500652_000148 | 3300053131 | Bacteria | 26520 |
| 138 | Ga0500559_0003745 | 3300053136 | Bacteria | 7388 |
| 139 | Ga0500559_0141373 | 3300053136 | Bacteria | 1127 |
| 140 | Ga0500627_0045139 | 3300053158 | Bacteria | 1906 |
| 141 | Ga0500634_0003574 | 3300053161 | Bacteria | 6956 |
| 142 | Ga0501082_0192513 | 3300060353 | Bacteria | 1774 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | iso_pu_bacteria | 2528768022 | 2528858853 | 187 |
| 2 | 3300031090 | Ga0265760_10102674 | Ga0265760_101026741 | 189 |
| 3 | 3300003659 | JGI25404J52841_10001734 | JGI25404J52841_100017343 | 190 |
| 4 | 3300005614 | Ga0068856_100785727 | Ga0068856_1007857271 | 190 |
| 5 | 3300005616 | Ga0068852_100364997 | Ga0068852_1003649972 | 190 |
| 6 | 3300005983 | Ga0081540_1004078 | Ga0081540_100407813 | 190 |
| 7 | 3300026078 | Ga0207702_10486931 | Ga0207702_104869312 | 190 |
| 8 | 3300026142 | Ga0207698_10382790 | Ga0207698_103827901 | 190 |
| 9 | iso_pu_bacteria | 2824746037 | 2824750602 | 193 |
| 10 | 3300025915 | Ga0207693_10336554 | Ga0207693_103365541 | 195 |
| 11 | 3300005435 | Ga0070714_100542146 | Ga0070714_1005421461 | 196 |
| 12 | 3300037418 | Ga0395900_0101449 | Ga0395900_0101449_1615_2223 | 197 |
| 13 | 3300046674 | Ga0495588_0057438 | Ga0495588_0057438_674_1282 | 197 |
| 14 | 3300047321 | Ga0495676_0241637 | Ga0495676_0241637_524_1132 | 197 |
| 15 | iso_pu_bacteria | 2791355266 | 2793363002 | 199 |
| 16 | iso_pu_bacteria | 2513237146 | 2513929016 | 203 |
| 17 | iso_pu_bacteria | 2599185170 | 2599414772 | 203 |
| 18 | iso_pu_bacteria | 2838035591 | 2838039508 | 203 |
| 19 | 3300025294 | Ga0209025_1063088 | Ga0209025_10630882 | 204 |
| 20 | 3300053136 | Ga0500559_0003745 | Ga0500559_0003745_2216_2830 | 204 |
| 21 | 3300005543 | Ga0070672_100743701 | Ga0070672_1007437011 | 205 |
| 22 | 3300025940 | Ga0207691_10690956 | Ga0207691_106909561 | 205 |
| 23 | 3300046455 | Ga0495603_0067832 | Ga0495603_0067832_1095_1736 | 205 |
| 24 | 3300047673 | Ga0495593_0093146 | Ga0495593_0093146_475_1116 | 205 |
| 25 | 3300053087 | Ga0500643_000098 | Ga0500643_000098_6718_7446 | 206 |
| 26 | 3300005539 | Ga0068853_100434167 | Ga0068853_1004341672 | 207 |
| 27 | 3300009551 | Ga0105238_10030911 | Ga0105238_100309114 | 207 |
| 28 | 3300013104 | Ga0157370_10052257 | Ga0157370_100522571 | 207 |
| 29 | 3300025924 | Ga0207694_10138205 | Ga0207694_101382052 | 207 |
| 30 | 3300053119 | Ga0500595_041736 | Ga0500595_041736_446_1120 | 207 |
| 31 | 3300005339 | Ga0070660_100256432 | Ga0070660_1002564321 | 208 |
| 32 | 3300005340 | Ga0070689_100116294 | Ga0070689_1001162942 | 208 |
| 33 | 3300005364 | Ga0070673_100417451 | Ga0070673_1004174511 | 208 |
| 34 | 3300005441 | Ga0070700_100602232 | Ga0070700_1006022321 | 208 |
| 35 | 3300005543 | Ga0070672_100550802 | Ga0070672_1005508021 | 208 |
| 36 | 3300005564 | Ga0070664_100145575 | Ga0070664_1001455753 | 208 |
| 37 | 3300005578 | Ga0068854_101038733 | Ga0068854_1010387331 | 208 |
| 38 | 3300014325 | Ga0163163_10446616 | Ga0163163_104466161 | 208 |
| 39 | 3300025919 | Ga0207657_10239797 | Ga0207657_102397972 | 208 |
| 40 | 3300025927 | Ga0207687_10670375 | Ga0207687_106703752 | 208 |
| 41 | 3300025936 | Ga0207670_10061057 | Ga0207670_100610573 | 208 |
| 42 | 3300025960 | Ga0207651_10074861 | Ga0207651_100748613 | 208 |
| 43 | 3300025981 | Ga0207640_11025117 | Ga0207640_110251171 | 208 |
| 44 | 3300028379 | Ga0268266_10094931 | Ga0268266_100949314 | 208 |
| 45 | 3300014325 | Ga0163163_10317635 | Ga0163163_103176353 | 210 |
| 46 | 3300039437 | Ga0436365_1305953 | Ga0436365_1305953_685_1317 | 210 |
| 47 | 3300048907 | Ga0496104_0592448 | Ga0496104_0592448_208_855 | 210 |
| 48 | 3300048912 | Ga0496109_0177673 | Ga0496109_0177673_1138_1785 | 210 |
| 49 | 3300048915 | Ga0496112_0008018 | Ga0496112_0008018_3035_3682 | 210 |
| 50 | 3300038443 | Ga0395901_0549821 | Ga0395901_0549821_28_687 | 212 |
| 51 | 3300049823 | Ga0501044_0004456 | Ga0501044_0004456_1819_2493 | 212 |
| 52 | iso_pu_bacteria | 2508501128 | 2509150330 | 212 |
| 53 | 3300060353 | Ga0501082_0192513 | Ga0501082_0192513_788_1495 | 213 |
| 54 | iso_pu_bacteria | 2513237095 | 2513651125 | 214 |
| 55 | iso_pu_bacteria | 2513237102 | 2513705933 | 214 |
| 56 | iso_pu_bacteria | 2513237104 | 2513716849 | 214 |
| 57 | iso_pu_bacteria | 2517093001 | 2517108982 | 214 |
| 58 | iso_pu_bacteria | 2617270735 | 2617349542 | 214 |
| 59 | iso_pu_bacteria | 2874645413 | 2874651237 | 214 |
| 60 | iso_pu_bacteria | 2881364244 | 2881371220 | 214 |
| 61 | iso_pu_bacteria | 2932809354 | 2932816771 | 214 |
| 62 | iso_pu_bacteria | 2935648319 | 2935655792 | 214 |
| 63 | iso_pu_bacteria | 2935656913 | 2935664671 | 214 |
| 64 | iso_pu_bacteria | 2935760218 | 2935769120 | 214 |
| 65 | iso_pu_bacteria | 2935810662 | 2935818790 | 214 |
| 66 | iso_pu_bacteria | 2935908558 | 2935911959 | 214 |
| 67 | iso_pu_bacteria | 2935926038 | 2935928988 | 214 |
| 68 | iso_pu_bacteria | 2935934488 | 2935938633 | 214 |
| 69 | iso_pu_bacteria | 2935942939 | 2935945475 | 214 |
| 70 | iso_pu_bacteria | 2935951376 | 2935954918 | 214 |
| 71 | iso_pu_bacteria | 2935967501 | 2935970805 | 214 |
| 72 | iso_pu_bacteria | 2936011229 | 2936018741 | 214 |
| 73 | iso_pu_bacteria | 2936019824 | 2936027231 | 214 |
| 74 | iso_pu_bacteria | 2936028420 | 2936036111 | 214 |
| 75 | iso_pu_bacteria | 2936046547 | 2936054220 | 214 |
| 76 | iso_pu_bacteria | 8019576017 | 8019578626 | 214 |
| 77 | iso_pu_bacteria | 8019597564 | 8019605025 | 214 |
| 78 | iso_pu_bacteria | 8019608314 | 8019613508 | 214 |
| 79 | iso_pu_bacteria | 8019687851 | 8019688619 | 214 |
| 80 | iso_pu_bacteria | 8056673599 | 8056675474 | 214 |
| 81 | iso_pu_bacteria | 2903748898 | 2903753576 | 215 |
| 82 | iso_pu_bacteria | 2903768456 | 2903771482 | 215 |
| 83 | iso_pu_bacteria | 8019648815 | 8019653701 | 215 |
| 84 | 3300031239 | Ga0265328_10004177 | Ga0265328_100041776 | 216 |
| 85 | 3300046680 | Ga0495646_0000601 | Ga0495646_0000601_17485_18153 | 216 |
| 86 | iso_pu_bacteria | 2932818245 | 2932822413 | 216 |
| 87 | iso_pu_bacteria | 2935616580 | 2935619352 | 216 |
| 88 | iso_pu_bacteria | 2935855204 | 2935858333 | 216 |
| 89 | iso_pu_bacteria | 2935864058 | 2935873293 | 216 |
| 90 | iso_pu_bacteria | 2935873716 | 2935873740 | 216 |
| 91 | 3300006175 | Ga0070712_100674762 | Ga0070712_1006747621 | 217 |
| 92 | 3300021361 | Ga0213872_10080972 | Ga0213872_100809722 | 217 |
| 93 | 3300025915 | Ga0207693_10107565 | Ga0207693_101075652 | 217 |
| 94 | 3300031239 | Ga0265328_10002276 | Ga0265328_100022761 | 217 |
| 95 | 3300031251 | Ga0265327_10007208 | Ga0265327_100072082 | 217 |
| 96 | 3300036401 | Ga0373937_0279067 | Ga0373937_0279067_82_750 | 217 |
| 97 | 3300039447 | Ga0436361_0439775 | Ga0436361_0439775_615_1286 | 217 |
| 98 | 3300053161 | Ga0500634_0003574 | Ga0500634_0003574_2268_2936 | 217 |
| 99 | 3300005440 | Ga0070705_100642348 | Ga0070705_1006423481 | 218 |
| 100 | 3300005455 | Ga0070663_100020063 | Ga0070663_1000200634 | 218 |
| 101 | 3300005535 | Ga0070684_100153021 | Ga0070684_1001530211 | 218 |
| 102 | 3300005539 | Ga0068853_100018055 | Ga0068853_1000180558 | 218 |
| 103 | 3300005545 | Ga0070695_100307270 | Ga0070695_1003072701 | 218 |
| 104 | 3300005547 | Ga0070693_100129428 | Ga0070693_1001294282 | 218 |
| 105 | 3300005548 | Ga0070665_100069007 | Ga0070665_1000690072 | 218 |
| 106 | 3300005563 | Ga0068855_100141973 | Ga0068855_1001419734 | 218 |
| 107 | 3300005564 | Ga0070664_100566344 | Ga0070664_1005663441 | 218 |
| 108 | 3300005614 | Ga0068856_100012470 | Ga0068856_1000124706 | 218 |
| 109 | 3300005616 | Ga0068852_100188318 | Ga0068852_1001883183 | 218 |
| 110 | 3300009093 | Ga0105240_10002281 | Ga0105240_1000228116 | 218 |
| 111 | 3300009094 | Ga0111539_10678500 | Ga0111539_106785002 | 218 |
| 112 | 3300009174 | Ga0105241_10000387 | Ga0105241_1000038721 | 218 |
| 113 | 3300009545 | Ga0105237_10025797 | Ga0105237_100257974 | 218 |
| 114 | 3300009551 | Ga0105238_10007458 | Ga0105238_1000745810 | 218 |
| 115 | 3300009553 | Ga0105249_10187014 | Ga0105249_101870143 | 218 |
| 116 | 3300010375 | Ga0105239_10016238 | Ga0105239_100162388 | 218 |
| 117 | 3300010375 | Ga0105239_10395634 | Ga0105239_103956341 | 218 |
| 118 | 3300014969 | Ga0157376_10027295 | Ga0157376_100272953 | 218 |
| 119 | 3300025911 | Ga0207654_10000216 | Ga0207654_1000021619 | 218 |
| 120 | 3300025913 | Ga0207695_10000430 | Ga0207695_1000043075 | 218 |
| 121 | 3300025914 | Ga0207671_10014531 | Ga0207671_100145314 | 218 |
| 122 | 3300025915 | Ga0207693_10404789 | Ga0207693_104047891 | 218 |
| 123 | 3300025924 | Ga0207694_10002824 | Ga0207694_1000282413 | 218 |
| 124 | 3300025928 | Ga0207700_10857033 | Ga0207700_108570331 | 218 |
| 125 | 3300025940 | Ga0207691_10819803 | Ga0207691_108198031 | 218 |
| 126 | 3300025949 | Ga0207667_10064975 | Ga0207667_100649755 | 218 |
| 127 | 3300026041 | Ga0207639_10011643 | Ga0207639_100116434 | 218 |
| 128 | 3300026067 | Ga0207678_10022951 | Ga0207678_100229516 | 218 |
| 129 | 3300026078 | Ga0207702_10000006 | Ga0207702_1000000666 | 218 |
| 130 | 3300026088 | Ga0207641_10512326 | Ga0207641_105123262 | 218 |
| 131 | 3300028379 | Ga0268266_10074100 | Ga0268266_100741004 | 218 |
| 132 | 3300034816 | Ga0373930_0030381 | Ga0373930_0030381_150_830 | 218 |
| 133 | 3300034957 | Ga0373938_0071216 | Ga0373938_0071216_33_713 | 218 |
| 134 | 3300035112 | Ga0373932_0009098 | Ga0373932_0009098_1479_2159 | 218 |
| 135 | 3300035114 | Ga0373939_0042861 | Ga0373939_0042861_75_755 | 218 |
| 136 | 3300035691 | Ga0373931_0494098 | Ga0373931_0494098_51_737 | 218 |
| 137 | 3300046522 | Ga0495643_0012435 | Ga0495643_0012435_3991_4677 | 218 |
| 138 | 3300047317 | Ga0495604_0019706 | Ga0495604_0019706_1112_1831 | 218 |
| 139 | 3300048909 | Ga0496106_0518536 | Ga0496106_0518536_231_911 | 218 |
| 140 | 3300048926 | Ga0496123_0118353 | Ga0496123_0118353_146_820 | 218 |
| 141 | 3300049572 | Ga0501036_0630331 | Ga0501036_0630331_168_839 | 218 |
| 142 | 3300049581 | Ga0501047_0029770 | Ga0501047_0029770_3205_3876 | 218 |
| 143 | 3300049823 | Ga0501044_0414828 | Ga0501044_0414828_367_1038 | 218 |
| 144 | 3300050511 | nmdc:mga08y16_517868_c1 | nmdc:mga08y16_517868_c1_450_1130 | 218 |
| 145 | 3300053131 | Ga0500652_000148 | Ga0500652_000148_3466_4143 | 218 |
| 146 | 3300053158 | Ga0500627_0045139 | Ga0500627_0045139_818_1492 | 218 |
| 147 | iso_pu_bacteria | 2824661429 | 2824668753 | 218 |
| 148 | iso_pu_bacteria | 2935984226 | 2935991167 | 218 |
| 149 | 3300005338 | Ga0068868_100250809 | Ga0068868_1002508093 | 219 |
| 150 | 3300005347 | Ga0070668_100026594 | Ga0070668_1000265943 | 219 |
| 151 | 3300005356 | Ga0070674_100018021 | Ga0070674_1000180212 | 219 |
| 152 | 3300005356 | Ga0070674_100027827 | Ga0070674_1000278274 | 219 |
| 153 | 3300005365 | Ga0070688_100033098 | Ga0070688_1000330983 | 219 |
| 154 | 3300005367 | Ga0070667_100029752 | Ga0070667_1000297523 | 219 |
| 155 | 3300005455 | Ga0070663_100130665 | Ga0070663_1001306651 | 219 |
| 156 | 3300005459 | Ga0068867_100054420 | Ga0068867_1000544204 | 219 |
| 157 | 3300005466 | Ga0070685_10030687 | Ga0070685_100306872 | 219 |
| 158 | 3300005615 | Ga0070702_100317017 | Ga0070702_1003170171 | 219 |
| 159 | 3300005718 | Ga0068866_10123292 | Ga0068866_101232923 | 219 |
| 160 | 3300005719 | Ga0068861_100041260 | Ga0068861_1000412604 | 219 |
| 161 | 3300005983 | Ga0081540_1001135 | Ga0081540_100113517 | 219 |
| 162 | 3300006175 | Ga0070712_100159235 | Ga0070712_1001592352 | 219 |
| 163 | 3300006358 | Ga0068871_100642673 | Ga0068871_1006426731 | 219 |
| 164 | 3300006881 | Ga0068865_100181915 | Ga0068865_1001819152 | 219 |
| 165 | 3300009098 | Ga0105245_10159825 | Ga0105245_101598254 | 219 |
| 166 | 3300009148 | Ga0105243_10017605 | Ga0105243_100176055 | 219 |
| 167 | 3300010375 | Ga0105239_10414775 | Ga0105239_104147752 | 219 |
| 168 | 3300013297 | Ga0157378_10074320 | Ga0157378_100743204 | 219 |
| 169 | 3300013306 | Ga0163162_10108481 | Ga0163162_101084813 | 219 |
| 170 | 3300013306 | Ga0163162_10646248 | Ga0163162_106462481 | 219 |
| 171 | 3300014326 | Ga0157380_10108828 | Ga0157380_101088281 | 219 |
| 172 | 3300014969 | Ga0157376_10090449 | Ga0157376_100904494 | 219 |
| 173 | 3300017792 | Ga0163161_10056393 | Ga0163161_100563934 | 219 |
| 174 | 3300025899 | Ga0207642_10002762 | Ga0207642_100027624 | 219 |
| 175 | 3300025928 | Ga0207700_10543749 | Ga0207700_105437491 | 219 |
| 176 | 3300025932 | Ga0207690_10557768 | Ga0207690_105577681 | 219 |
| 177 | 3300025935 | Ga0207709_10007106 | Ga0207709_100071064 | 219 |
| 178 | 3300025937 | Ga0207669_10380771 | Ga0207669_103807711 | 219 |
| 179 | 3300025972 | Ga0207668_10082436 | Ga0207668_100824362 | 219 |
| 180 | 3300025986 | Ga0207658_10245420 | Ga0207658_102454203 | 219 |
| 181 | 3300026089 | Ga0207648_10016699 | Ga0207648_100166993 | 219 |
| 182 | 3300046684 | Ga0495669_0011881 | Ga0495669_0011881_1170_1877 | 219 |
| 183 | 3300053136 | Ga0500559_0141373 | Ga0500559_0141373_411_1094 | 219 |
| 184 | 3300005563 | Ga0068855_100921619 | Ga0068855_1009216192 | 220 |
| 185 | 3300009551 | Ga0105238_10102000 | Ga0105238_101020002 | 220 |
| 186 | 3300003320 | rootH2_10060596 | rootH2_100605969 | 225 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 3bvp-assembly1.cif.gz_A-2 | crystal structure of the n-terminal catalytic domain of tp901-1 integrase | 0.7294 | 5 | 125 |
| 1k78-assembly1.cif.gz_I | pax5(1-149)+ets-1(331-440)+dna | 0.6769 | 175 | 222 |
| 3bvp-assembly1.cif.gz_B-2 | crystal structure of the n-terminal catalytic domain of tp901-1 integrase | 0.6626 | 5 | 125 |
| 5c32-assembly1.cif.gz_A | constitutively active sin recombinase cataltyic domain - i100t | 0.6605 | 6 | 122 |
| 5c31-assembly2.cif.gz_F | constitutively active sin recombinase catalytic domain reveals two rotational intermediates | 0.6587 | 6 | 122 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 6dgcA01 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Resolvase, N-terminal catalytic domain | 0.746 | 5 | 102 | 3.40.50.1390 |
| af_O06604_4_138_3.40.50.1390 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Resolvase, N-terminal catalytic domain | 0.7444 | 5 | 124 | 3.40.50.1390 |
| 6dgcA01 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Resolvase, N-terminal catalytic domain | 0.7212 | 5 | 102 | 3.40.50.1390 |
| 1k78I00 | Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.6769 | 175 | 222 | 1.10.10.10 |
| af_M0R5U3_1_190_3.20.20.140 | Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases | 0.671 | 59 | 101 | 3.20.20.140 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-M5FHA0-F1-model_v4 | Resolvase-like | 0.9063 | 5 | 120 |
GO:0000150
GO:0003677 |
| AF-A0A177H732-F1-model_v4 | ResolvaseC N terminal domain | 0.8919 | 5 | 105 |
GO:0000150
GO:0003677 GO:0015074 |
| AF-A0A530M384-F1-model_v4 | Recombinase family protein | 0.891 | 5 | 119 |
GO:0000150
GO:0003677 |
| AF-A0A519PNX0-F1-model_v4 | deleted | 0.8854 | 1 | 143 |
|
| AF-Q07JX8-F1-model_v4 | Resolvase N-terminal domain protein | 0.8813 | 3 | 150 |
GO:0000150
GO:0003677 |
Predicted Structure (AlphaFold2)
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