F286378

General Info

Members Datasets Scaffolds Average Seq Length
186 145 372 129

Family's Representative Sequence

Representative Sequence 3300041408|Ga0439453_0009315|Ga0439453_0009315_757_1176
Length 139
Sequence VIVVVAAVIERDGAFLVTRRQKGVHLAGLWEFPGGKIDEGETHAAALTREIHEELDADVDVGDLVFEVTHTYDDLAPPKPSAKAGRTVTLYFYRCTLRGTPRPLLGQEMRWVPRAELAALGFPPADEELIKRLTESPAR

Samples

Sample ID Description Type Environment
1 3300041408 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z062817_5195 Metagenome Rhizosphere
2 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
10 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
11 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
12 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
13 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
14 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
15 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
16 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
17 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
18 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
19 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
20 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
21 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
22 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
23 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
24 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
25 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
26 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
27 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
28 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
29 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
30 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
31 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
32 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
33 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
34 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
35 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
36 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
37 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
38 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
39 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
40 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
41 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
42 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
43 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
44 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
45 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
46 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
47 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
48 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
49 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
50 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
51 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
52 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
53 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
54 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
55 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
56 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
57 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
58 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
59 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
60 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
61 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
62 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
82 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
85 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
86 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
87 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
88 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
89 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
90 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
91 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
92 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
93 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
94 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
95 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
96 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
97 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
98 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
99 3300042008 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z062817_5219 Metagenome Rhizosphere
100 3300042013 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z071817_5339 Metagenome Rhizosphere
101 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
102 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
103 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
104 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
105 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
106 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
107 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
108 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
109 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
110 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
111 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
112 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
113 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
114 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
115 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
116 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
117 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
118 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
119 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
120 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
121 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
122 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
123 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
124 3300049688 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_A_4_drought Metagenome Rhizosphere
125 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
126 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
127 3300049760 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F12_A_4_control Metagenome Rhizosphere
128 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
129 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
130 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
131 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
132 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
133 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
134 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
135 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
136 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
137 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
138 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
139 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
140 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
141 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
142 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
143 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
144 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
145 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.99
Nodule 0
Rhizoplane 0
Rhizosphere 93.01
Stem 0
Stem Tuber 0
Unclassified 10.22

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0439453_0009315 3300041408 Bacteria 1598
2 Ga0065707_10088701 3300005295 Bacteria 4577
3 Ga0070658_10116517 3300005327 Bacteria 2217
4 Ga0070683_100163888 3300005329 Bacteria 2109
5 Ga0070683_100439654 3300005329 Bacteria 1244
6 Ga0070670_100118400 3300005331 Bacteria 2284
7 Ga0070670_101748877 3300005331 Unclassified 572
8 Ga0068869_100468634 3300005334 Bacteria 1047
9 Ga0070680_100197783 3300005336 Bacteria 1695
10 Ga0068868_100126791 3300005338 Bacteria 2086
11 Ga0070689_100700824 3300005340 Bacteria 884
12 Ga0070692_11017373 3300005345 Bacteria 580
13 Ga0070668_101588750 3300005347 Unclassified 599
14 Ga0070669_101687927 3300005353 Unclassified 552
15 Ga0070675_100072672 3300005354 Bacteria 2855
16 Ga0070673_100053972 3300005364 Bacteria 3160
17 Ga0070688_100159685 3300005365 Bacteria 1548
18 Ga0070713_100042801 3300005436 Bacteria 3699
19 Ga0070711_100403288 3300005439 Bacteria 1110
20 Ga0070705_100135412 3300005440 Bacteria 1613
21 Ga0070705_100358807 3300005440 Bacteria 1065
22 Ga0070700_100157894 3300005441 Bacteria 1558
23 Ga0070708_100218079 3300005445 Bacteria 1789
24 Ga0068867_101099676 3300005459 Bacteria 726
25 Ga0068867_101329881 3300005459 Bacteria 664
26 Ga0068867_101425813 3300005459 Bacteria 643
27 Ga0070698_100823234 3300005471 Bacteria 873
28 Ga0070699_100702550 3300005518 Unclassified 924
29 Ga0070684_100549841 3300005535 Bacteria 1071
30 Ga0070695_100224513 3300005545 Bacteria 1355
31 Ga0070664_100011241 3300005564 Bacteria 7261
32 Ga0070664_100142683 3300005564 Unclassified 2110
33 Ga0068854_100795717 3300005578 Bacteria 824
34 Ga0070702_100979023 3300005615 Bacteria 668
35 Ga0068864_101327134 3300005618 Unclassified 720
36 Ga0068861_100640484 3300005719 Bacteria 981
37 Ga0068861_100643032 3300005719 Bacteria 979
38 Ga0068863_100532277 3300005841 Bacteria 1159
39 Ga0068858_100005453 3300005842 Bacteria 12454
40 Ga0068858_100034247 3300005842 Bacteria 4711
41 Ga0068858_100215215 3300005842 Bacteria 1819
42 Ga0068860_100099725 3300005843 Bacteria 2770
43 Ga0068860_101041208 3300005843 Bacteria 837
44 Ga0068862_102198890 3300005844 Unclassified 563
45 Ga0081538_10138199 3300005981 Bacteria 1129
46 Ga0081539_10004921 3300005985 Bacteria 14226
47 Ga0075365_10319736 3300006038 Bacteria 1093
48 Ga0075363_100074271 3300006048 Bacteria 1851
49 Ga0075364_10003086 3300006051 Bacteria 9416
50 Ga0075362_10000421 3300006177 Bacteria 12191
51 Ga0075367_10003356 3300006178 Bacteria 7615
52 Ga0075366_10088303 3300006195 Bacteria 1856
53 Ga0068871_100226016 3300006358 Bacteria 1623
54 Ga0068871_100827081 3300006358 Bacteria 855
55 Ga0075428_100000786 3300006844 Bacteria 33072
56 Ga0075428_100050595 3300006844 Bacteria 4556
57 Ga0075430_100001331 3300006846 Bacteria 19957
58 Ga0075430_100019839 3300006846 Bacteria 5719
59 Ga0075431_100001181 3300006847 Bacteria 23559
60 Ga0075431_100031609 3300006847 Bacteria 5452
61 Ga0075433_11579177 3300006852 Unclassified 566
62 Ga0075434_100021488 3300006871 Bacteria 6272
63 Ga0075434_100045953 3300006871 Bacteria 4333
64 Ga0075429_100000181 3300006880 Bacteria 41066
65 Ga0097620_102110437 3300006931 Unclassified 622
66 Ga0075435_100014584 3300007076 Bacteria 5881
67 Ga0075435_100017166 3300007076 Bacteria 5471
68 Ga0075435_100169834 3300007076 Bacteria 1839
69 Ga0105247_10021259 3300009101 Bacteria 3904
70 Ga0114129_10117255 3300009147 Bacteria 3669
71 Ga0105243_10898733 3300009148 Bacteria 881
72 Ga0105242_11309846 3300009176 Bacteria 748
73 Ga0105238_12093145 3300009551 Bacteria 600
74 Ga0157375_10367022 3300013308 Bacteria 1606
75 Ga0157380_13038041 3300014326 Bacteria 535
76 Ga0157377_10706328 3300014745 Bacteria 733
77 Ga0157379_10009679 3300014968 Bacteria 8390
78 Ga0157376_10022902 3300014969 Bacteria 4878
79 Ga0207710_10008249 3300025900 Bacteria 4399
80 Ga0207645_10232960 3300025907 Bacteria 1216
81 Ga0207681_10674898 3300025923 Bacteria 858
82 Ga0207650_10153155 3300025925 Bacteria 1821
83 Ga0207691_10536315 3300025940 Bacteria 993
84 Ga0207711_10181870 3300025941 Bacteria 1912
85 Ga0207689_10041392 3300025942 Bacteria 3812
86 Ga0207689_10299153 3300025942 Bacteria 1334
87 Ga0207689_11224878 3300025942 Bacteria 632
88 Ga0207661_10799034 3300025944 Bacteria 868
89 Ga0207679_10093713 3300025945 Bacteria 2330
90 Ga0207679_10112549 3300025945 Bacteria 2151
91 Ga0207651_10323745 3300025960 Bacteria 1289
92 Ga0207712_11348958 3300025961 Bacteria 638
93 Ga0207658_10353813 3300025986 Bacteria 1280
94 Ga0207677_10557163 3300026023 Bacteria 1000
95 Ga0207703_10091839 3300026035 Bacteria 2554
96 Ga0207703_10243097 3300026035 Bacteria 1619
97 Ga0207708_10370181 3300026075 Bacteria 1179
98 Ga0207641_10048100 3300026088 Bacteria 3599
99 Ga0207641_10631712 3300026088 Bacteria 1051
100 Ga0207641_10881739 3300026088 Bacteria 888
101 Ga0207648_10340507 3300026089 Bacteria 1350
102 Ga0207648_10948555 3300026089 Bacteria 805
103 Ga0207648_11250155 3300026089 Bacteria 697
104 Ga0207676_11443336 3300026095 Bacteria 684
105 Ga0207674_10190099 3300026116 Bacteria 2003
106 Ga0209813_10005965 3300027866 Bacteria 2990
107 Ga0268265_11736759 3300028380 Bacteria 630
108 Ga0268264_10115822 3300028381 Bacteria 2355
109 Ga0265338_10049013 3300028800 Bacteria 3834
110 Ga0307408_101726904 3300031548 Unclassified 597
111 Ga0307413_11335072 3300031824 Bacteria 628
112 Ga0307410_10051728 3300031852 Bacteria 2770
113 Ga0307410_11215380 3300031852 Bacteria 657
114 Ga0307407_10006519 3300031903 Bacteria 5199
115 Ga0307412_10919387 3300031911 Unclassified 768
116 Ga0307409_100191117 3300031995 Bacteria 1822
117 Ga0307416_100455258 3300032002 Bacteria 1333
118 Ga0307414_10141698 3300032004 Bacteria 1883
119 Ga0307411_11892412 3300032005 Bacteria 555
120 Ga0373940_0215060 3300035088 Bacteria 637
121 Ga0373924_0348259 3300035410 Unclassified 660
122 Ga0373925_0850165 3300037068 Bacteria 752
123 Ga0439431_0107967 3300041997 Unclassified 769
124 Ga0439449_0149784 3300042007 Unclassified 870
125 Ga0439450_006597 3300042008 Bacteria 2095
126 Ga0439456_023796 3300042013 Bacteria 1299
127 Ga0439446_0018698 3300042156 Bacteria 1944
128 Ga0439435_0029725 3300042436 Bacteria 1477
129 Ga0451577_0954810 3300042876 Bacteria 771
130 Ga0466957_0763956 3300044842 Unclassified 685
131 Ga0451576_0477172 3300045051 Bacteria 1310
132 Ga0466967_1687302 3300045976 Bacteria 631
133 Ga0495592_0371244 3300046454 Bacteria 913
134 Ga0495639_0518829 3300046475 Bacteria 609
135 Ga0495586_0227594 3300046535 Bacteria 1061
136 Ga0495635_0467981 3300046663 Bacteria 832
137 Ga0495658_0025504 3300046683 Bacteria 3160
138 Ga0501036_0383340 3300049572 Bacteria 1173
139 Ga0501038_0137523 3300049574 Bacteria 2001
140 Ga0501040_0028655 3300049576 Bacteria 3755
141 Ga0501041_0049793 3300049577 Bacteria 2552
142 Ga0501043_0238237 3300049579 Bacteria 1404
143 Ga0501048_0021040 3300049582 Bacteria 4779
144 Ga0501072_0376499 3300049588 Bacteria 1126
145 Ga0501073_0758119 3300049589 Bacteria 669
146 Ga0501075_0124034 3300049591 Bacteria 1966
147 Ga0501076_0787509 3300049592 Bacteria 785
148 Ga0501076_0983878 3300049592 Bacteria 695
149 Ga0501249_055091 3300049679 Bacteria 916
150 Ga0501257_173819 3300049686 Bacteria 606
151 Ga0501259_102883 3300049688 Bacteria 657
152 Ga0501079_0011523 3300049741 Bacteria 6750
153 Ga0501079_0851349 3300049741 Bacteria 718
154 Ga0501080_0178563 3300049742 Bacteria 1955
155 Ga0501263_055616 3300049760 Bacteria 610
156 Ga0501035_0454916 3300049822 Bacteria 1059
157 Ga0501045_0166362 3300049824 Bacteria 1642
158 nmdc:mga00v17_18443_c1 3300050491 Bacteria 3964
159 nmdc:mga0k408_270175_c1 3300050493 Bacteria 1015
160 nmdc:mga0k408_28696_c1 3300050493 Bacteria 3164
161 nmdc:mga06z11_125986_c1 3300050494 Bacteria 1433
162 nmdc:mga06z11_440349_c1 3300050494 Bacteria 787
163 nmdc:mga04h51_135330_c1 3300050495 Bacteria 930
164 nmdc:mga05p37_25576_c1 3300050507 Bacteria 6139
165 nmdc:mga05p37_553292_c1 3300050507 Bacteria 1309
166 nmdc:mga09592_3046_c1 3300050508 Bacteria 13599
167 nmdc:mga0qj67_384944_c1 3300050509 Bacteria 1132
168 nmdc:mga0qj67_648195_c1 3300050509 Bacteria 843
169 nmdc:mga06r32_198049_c1 3300050510 Bacteria 1996
170 nmdc:mga06r32_222782_c1 3300050510 Bacteria 1874
171 nmdc:mga06r32_6086_c1 3300050510 Bacteria 10838
172 nmdc:mga0n895_403_c1 3300050512 Bacteria 29107
173 nmdc:mga0n895_4796_c1 3300050512 Bacteria 11195
174 nmdc:mga0rr50_14931_c1 3300050513 Bacteria 5112
175 nmdc:mga0rr50_46761_c1 3300050513 Bacteria 3187
176 nmdc:mga0rr50_627181_c1 3300050513 Unclassified 917
177 nmdc:mga0rr50_6397_c1 3300050513 Bacteria 7165
178 nmdc:mga08x19_167775_c1 3300050514 Bacteria 1494
179 nmdc:mga0a205_1059097_c1 3300050515 Unclassified 658
180 nmdc:mga0a205_14782_c1 3300050515 Bacteria 7284
181 Ga0495619_0272959 3300053085 Bacteria 1172
182 Ga0501084_0025570 3300054114 Bacteria 4925
183 Ga0501084_0886901 3300054114 Unclassified 750
184 Ga0501082_0023787 3300060353 Bacteria 5283
185 Ga0501082_0518586 3300060353 Unclassified 1042
186 Ga0530510_0390371 3300061734 Bacteria 1048
187 Ga0439453_0009315
188 Ga0065707_10088701
189 Ga0070658_10116517
190 Ga0070683_100163888
191 Ga0070683_100439654
192 Ga0070670_100118400
193 Ga0070670_101748877
194 Ga0068869_100468634
195 Ga0070680_100197783
196 Ga0068868_100126791
197 Ga0070689_100700824
198 Ga0070692_11017373
199 Ga0070668_101588750
200 Ga0070669_101687927
201 Ga0070675_100072672
202 Ga0070673_100053972
203 Ga0070688_100159685
204 Ga0070713_100042801
205 Ga0070711_100403288
206 Ga0070705_100135412
207 Ga0070705_100358807
208 Ga0070700_100157894
209 Ga0070708_100218079
210 Ga0068867_101099676
211 Ga0068867_101329881
212 Ga0068867_101425813
213 Ga0070698_100823234
214 Ga0070699_100702550
215 Ga0070684_100549841
216 Ga0070695_100224513
217 Ga0070664_100011241
218 Ga0070664_100142683
219 Ga0068854_100795717
220 Ga0070702_100979023
221 Ga0068864_101327134
222 Ga0068861_100640484
223 Ga0068861_100643032
224 Ga0068863_100532277
225 Ga0068858_100005453
226 Ga0068858_100034247
227 Ga0068858_100215215
228 Ga0068860_100099725
229 Ga0068860_101041208
230 Ga0068862_102198890
231 Ga0081538_10138199
232 Ga0081539_10004921
233 Ga0075365_10319736
234 Ga0075363_100074271
235 Ga0075364_10003086
236 Ga0075362_10000421
237 Ga0075367_10003356
238 Ga0075366_10088303
239 Ga0068871_100226016
240 Ga0068871_100827081
241 Ga0075428_100000786
242 Ga0075428_100050595
243 Ga0075430_100001331
244 Ga0075430_100019839
245 Ga0075431_100001181
246 Ga0075431_100031609
247 Ga0075433_11579177
248 Ga0075434_100021488
249 Ga0075434_100045953
250 Ga0075429_100000181
251 Ga0097620_102110437
252 Ga0075435_100014584
253 Ga0075435_100017166
254 Ga0075435_100169834
255 Ga0105247_10021259
256 Ga0114129_10117255
257 Ga0105243_10898733
258 Ga0105242_11309846
259 Ga0105238_12093145
260 Ga0157375_10367022
261 Ga0157380_13038041
262 Ga0157377_10706328
263 Ga0157379_10009679
264 Ga0157376_10022902
265 Ga0207710_10008249
266 Ga0207645_10232960
267 Ga0207681_10674898
268 Ga0207650_10153155
269 Ga0207691_10536315
270 Ga0207711_10181870
271 Ga0207689_10041392
272 Ga0207689_10299153
273 Ga0207689_11224878
274 Ga0207661_10799034
275 Ga0207679_10093713
276 Ga0207679_10112549
277 Ga0207651_10323745
278 Ga0207712_11348958
279 Ga0207658_10353813
280 Ga0207677_10557163
281 Ga0207703_10091839
282 Ga0207703_10243097
283 Ga0207708_10370181
284 Ga0207641_10048100
285 Ga0207641_10631712
286 Ga0207641_10881739
287 Ga0207648_10340507
288 Ga0207648_10948555
289 Ga0207648_11250155
290 Ga0207676_11443336
291 Ga0207674_10190099
292 Ga0209813_10005965
293 Ga0268265_11736759
294 Ga0268264_10115822
295 Ga0265338_10049013
296 Ga0307408_101726904
297 Ga0307413_11335072
298 Ga0307410_10051728
299 Ga0307410_11215380
300 Ga0307407_10006519
301 Ga0307412_10919387
302 Ga0307409_100191117
303 Ga0307416_100455258
304 Ga0307414_10141698
305 Ga0307411_11892412
306 Ga0373940_0215060
307 Ga0373924_0348259
308 Ga0373925_0850165
309 Ga0439431_0107967
310 Ga0439449_0149784
311 Ga0439450_006597
312 Ga0439456_023796
313 Ga0439446_0018698
314 Ga0439435_0029725
315 Ga0451577_0954810
316 Ga0466957_0763956
317 Ga0451576_0477172
318 Ga0466967_1687302
319 Ga0495592_0371244
320 Ga0495639_0518829
321 Ga0495586_0227594
322 Ga0495635_0467981
323 Ga0495658_0025504
324 Ga0501036_0383340
325 Ga0501038_0137523
326 Ga0501040_0028655
327 Ga0501041_0049793
328 Ga0501043_0238237
329 Ga0501048_0021040
330 Ga0501072_0376499
331 Ga0501073_0758119
332 Ga0501075_0124034
333 Ga0501076_0787509
334 Ga0501076_0983878
335 Ga0501249_055091
336 Ga0501257_173819
337 Ga0501259_102883
338 Ga0501079_0011523
339 Ga0501079_0851349
340 Ga0501080_0178563
341 Ga0501263_055616
342 Ga0501035_0454916
343 Ga0501045_0166362
344 nmdc:mga00v17_18443_c1
345 nmdc:mga0k408_270175_c1
346 nmdc:mga0k408_28696_c1
347 nmdc:mga06z11_125986_c1
348 nmdc:mga06z11_440349_c1
349 nmdc:mga04h51_135330_c1
350 nmdc:mga05p37_25576_c1
351 nmdc:mga05p37_553292_c1
352 nmdc:mga09592_3046_c1
353 nmdc:mga0qj67_384944_c1
354 nmdc:mga0qj67_648195_c1
355 nmdc:mga06r32_198049_c1
356 nmdc:mga06r32_222782_c1
357 nmdc:mga06r32_6086_c1
358 nmdc:mga0n895_403_c1
359 nmdc:mga0n895_4796_c1
360 nmdc:mga0rr50_14931_c1
361 nmdc:mga0rr50_46761_c1
362 nmdc:mga0rr50_627181_c1
363 nmdc:mga0rr50_6397_c1
364 nmdc:mga08x19_167775_c1
365 nmdc:mga0a205_1059097_c1
366 nmdc:mga0a205_14782_c1
367 Ga0495619_0272959
368 Ga0501084_0025570
369 Ga0501084_0886901
370 Ga0501082_0023787
371 Ga0501082_0518586
372 Ga0530510_0390371

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF14815

NUDIX_4

NUDIX domain

4

132

0.9

PF00293

NUDIX

NUDIX domain

1

133

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
3r03-assembly1.cif.gz_A the crystal structure of nudix hydrolase from rhodospirillum rubrum 0.8889 2 125
3a6v-assembly3.cif.gz_A crystal structure of the mutt protein in mn(ii) bound holo form 0.8862 2 126
3gwy-assembly1.cif.gz_A crystal structure of putative ctp pyrophosphohydrolase from bacteroides fragilis 0.8819 2 124
3ees-assembly1.cif.gz_B structure of the rna pyrophosphohydrolase bdrpph 0.881 2 121
3hhj-assembly1.cif.gz_A crystal structure of mutator mutt from bartonella henselae 0.8753 2 126
ID Description Score Start End Superfamily
3gwyA00 Alpha Beta;Alpha-Beta Complex;Nucleoside Triphosphate Pyrophosphohydrolase;Nucleoside Triphosphate Pyrophosphohydrolase 0.8819 2 124 3.90.79.10
3eesB00 Alpha Beta;Alpha-Beta Complex;Nucleoside Triphosphate Pyrophosphohydrolase;Nucleoside Triphosphate Pyrophosphohydrolase 0.881 2 121 3.90.79.10
3a6uA00 Alpha Beta;Alpha-Beta Complex;Nucleoside Triphosphate Pyrophosphohydrolase;Nucleoside Triphosphate Pyrophosphohydrolase 0.8357 2 126 3.90.79.10
af_Q54BB8_1_159_3.90.79.10 Alpha Beta;Alpha-Beta Complex;Nucleoside Triphosphate Pyrophosphohydrolase;Nucleoside Triphosphate Pyrophosphohydrolase 0.8312 3 126 3.90.79.10
5zrcA00 Alpha Beta;Alpha-Beta Complex;Nucleoside Triphosphate Pyrophosphohydrolase;Nucleoside Triphosphate Pyrophosphohydrolase 0.8274 2 125 3.90.79.10
ID Description Score Start End GO Terms
AF-A0A381YZX4-F1-model_v4 8-oxo-dGTP diphosphatase (EC 3.6.1.55) 0.9485 18 129 GO:0006260
GO:0006281
GO:0008413
GO:0035539
GO:0044715
GO:0044716
AF-A0A3M1R4N2-F1-model_v4 8-oxo-dGTP diphosphatase (EC 3.6.1.55) 0.9473 19 102 GO:0006260
GO:0006281
GO:0008413
GO:0035539
GO:0044715
GO:0044716
AF-A0A2V8J0C8-F1-model_v4 8-oxo-dGTP diphosphatase (EC 3.6.1.55) 0.9464 2 126 GO:0006260
GO:0006281
GO:0008413
GO:0035539
GO:0044715
GO:0044716
AF-A0A2V8BVI3-F1-model_v4 8-oxo-dGTP diphosphatase (EC 3.6.1.55) 0.9403 2 126 GO:0006281
GO:0008413
GO:0035539
GO:0044715
GO:0044716
AF-A0A1C5X1J1-F1-model_v4 8-oxo-dGTP diphosphatase (EC 3.6.1.55) 0.9369 18 126 GO:0006260
GO:0006281
GO:0008413
GO:0035539
GO:0044715
GO:0044716

Map