F286252

General Info

Members Datasets Scaffolds Average Seq Length
186 125 372 357

Family's Representative Sequence

Representative Sequence 3300031824|Ga0307413_10002468|Ga0307413_100024686
Length 395
Sequence MSAPARDRRTAESAAAGTPSDVQHRRPRQLWGRPELYTSYAQSTRMLNTRPKLFGVLALIALAVYLPFGVEDQYLHIGALAFAAAVGAIGLNLVTGFAGQVSLGHAFFLAVGAYTAAALSGDPDGRTLGFGITFMPVWLLAAGLVAGVIGIIVAPIATRLRGLYLAIVTLGLVFLGEHIFKEWQDLTGGPGVGRAGPVPDLFGNRLNESGDVLTADQKLYLTMLVLLIIFAIFAKNLVRSKVGRAFSAVRDRDIAAEIIGVSLTRYKVIAFGVSSFYAGCAGAMVYTVVGFFDPTSFTLVLSINYVAMVLIGGAGTISGSIMGAIFITALPRLTQELPTVVPFISTDPTASVNTLNAAVVLYGLLIIVFLIFEPRGLFGIWLRIRNYFKAWPFSY

Samples

Sample ID Description Type Environment
1 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
2 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
3 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
4 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
5 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
6 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
7 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
8 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
9 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
10 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
11 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
12 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
13 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
14 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
15 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
16 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
17 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
18 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
19 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
20 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
21 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
22 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
23 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
24 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
25 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
26 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
27 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
28 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
29 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
30 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
31 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
32 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
33 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
34 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
35 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
36 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
37 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
38 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
49 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
50 3300030732 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 Metagenome Rhizosphere
51 3300030733 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 2 Metagenome Rhizosphere
52 3300030736 Rhizosphere soil microbial communities in healthy wheat plant from Wellcamp field in Toowoomba, Australia - sample 6 Metagenome Rhizosphere
53 3300030745 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 8 Metagenome Rhizosphere
54 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
55 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
56 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
57 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
58 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
59 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
60 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
61 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
62 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
63 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
64 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
65 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
66 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
67 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
68 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
69 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
70 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
71 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
72 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
73 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
74 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
75 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
76 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
77 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
78 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
79 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
80 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
81 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
82 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
83 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
84 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
85 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
86 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
87 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
88 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
89 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
90 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
91 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
92 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
93 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
94 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
95 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
96 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
97 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
98 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
99 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
100 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
101 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
102 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
103 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
104 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
105 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
106 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
107 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
108 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
109 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
110 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
111 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
112 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
113 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
114 2643221576 Nocardioides sp. Root614 Isolate Unclassified
115 2643221590 Nocardioides sp. Root682 Isolate Unclassified
116 2643221604 Nocardioides sp. Root190 Isolate Unclassified
117 2643221696 Nocardioides sp. Root140 Isolate Unclassified
118 2675903059 Asanoa hainanensis CGMCC 4.5593 Isolate Rhizosphere
119 2751185734 Saccharothrix sp. NRRL B-16314 Isolate Rhizosphere
120 2837183177 Egibacter rhizosphaerae EGI 80759 Isolate Unclassified
121 2868088558 Phytoactinopolyspora endophytica EGI 60009 Isolate Unclassified
122 2870721527 Saccharothrix ecbatanensis DSM 45486 Isolate Rhizosphere
123 2895427314 Nonomuraea sp. PA05 Isolate Unclassified
124 3001119090 Lolliginicoccus lacisalsi G463 Isolate Rhizosphere
125 8055412473 Micromonospora phytophila DSM 105363 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 93.55
Metatranscriptomes 0
Isolates 6.45

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.84
Nodule 0.54
Rhizoplane 2.15
Rhizosphere 87.1
Stem 0
Stem Tuber 0
Unclassified 0.54

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0307413_10002468 3300031824 Bacteria 7526
2 rootH1_10181183 3300003323 Bacteria 1946
3 Ga0070680_100117289 3300005336 Bacteria 2220
4 Ga0068868_100089464 3300005338 Bacteria 2479
5 Ga0070671_100049266 3300005355 Bacteria 3505
6 Ga0070674_100137227 3300005356 Bacteria 1831
7 Ga0070667_100032063 3300005367 Bacteria 4382
8 Ga0070667_100187779 3300005367 Bacteria 1830
9 Ga0070714_100049702 3300005435 Bacteria 3570
10 Ga0070694_100105292 3300005444 Bacteria 2002
11 Ga0070662_100142223 3300005457 Bacteria 1861
12 Ga0070707_100121466 3300005468 Bacteria 2536
13 Ga0070696_100210887 3300005546 Bacteria 1454
14 Ga0070704_100006089 3300005549 Bacteria 7080
15 Ga0070664_100168433 3300005564 Bacteria 1942
16 Ga0068859_100124667 3300005617 Bacteria 2644
17 Ga0068861_100070684 3300005719 Bacteria 2704
18 Ga0068863_100118016 3300005841 Bacteria 2528
19 Ga0068858_100438807 3300005842 Bacteria 1257
20 Ga0081538_10000265 3300005981 Bacteria 59857
21 Ga0075365_10000629 3300006038 Bacteria 13925
22 Ga0075363_100000603 3300006048 Bacteria 11864
23 Ga0075364_10007267 3300006051 Bacteria 6569
24 Ga0075362_10008066 3300006177 Bacteria 4013
25 Ga0075428_100000509 3300006844 Bacteria 39431
26 Ga0075428_100006142 3300006844 Bacteria 13369
27 Ga0075428_100026444 3300006844 Bacteria 6423
28 Ga0075428_100063671 3300006844 Bacteria 4038
29 Ga0075430_100003590 3300006846 Bacteria 13001
30 Ga0075430_100010182 3300006846 Bacteria 7962
31 Ga0075430_100110676 3300006846 Bacteria 2290
32 Ga0075430_100240268 3300006846 Bacteria 1501
33 Ga0075430_100247557 3300006846 Bacteria 1477
34 Ga0075430_100281363 3300006846 Bacteria 1376
35 Ga0075431_100000714 3300006847 Bacteria 28614
36 Ga0075431_100012029 3300006847 Bacteria 8732
37 Ga0075431_100024194 3300006847 Bacteria 6219
38 Ga0075431_100084610 3300006847 Bacteria 3274
39 Ga0075431_100104607 3300006847 Bacteria 2921
40 Ga0075431_100138326 3300006847 Bacteria 2510
41 Ga0075431_100151907 3300006847 Bacteria 2384
42 Ga0075433_10027779 3300006852 Bacteria 4803
43 Ga0075434_100129675 3300006871 Bacteria 2540
44 Ga0075429_100005140 3300006880 Bacteria 11251
45 Ga0075429_100014044 3300006880 Bacteria 6941
46 Ga0097620_100124665 3300006931 Bacteria 2644
47 Ga0111539_10026718 3300009094 Bacteria 7054
48 Ga0111539_10160616 3300009094 Bacteria 2628
49 Ga0105245_10033118 3300009098 Bacteria 4577
50 Ga0114129_10001516 3300009147 Bacteria 31421
51 Ga0114129_10003019 3300009147 Bacteria 23602
52 Ga0114129_10003188 3300009147 Bacteria 23002
53 Ga0114129_10169099 3300009147 Bacteria 2981
54 Ga0114129_10303773 3300009147 Bacteria 2126
55 Ga0114129_10362068 3300009147 Bacteria 1919
56 Ga0105249_10020657 3300009553 Bacteria 5887
57 Ga0105249_10043986 3300009553 Bacteria 4062
58 Ga0105239_10065684 3300010375 Bacteria 3985
59 Ga0163162_10017939 3300013306 Bacteria 6926
60 Ga0163162_10266245 3300013306 Bacteria 1845
61 Ga0163161_10060218 3300017792 Bacteria 2763
62 Ga0207693_10001346 3300025915 Bacteria 21707
63 Ga0207663_10031912 3300025916 Bacteria 3122
64 Ga0207662_10175668 3300025918 Bacteria 1376
65 Ga0207687_10009318 3300025927 Bacteria 6421
66 Ga0207706_10144180 3300025933 Bacteria 2095
67 Ga0207669_10171692 3300025937 Bacteria 1544
68 Ga0207712_10154615 3300025961 Bacteria 1775
69 Ga0207658_10036485 3300025986 Bacteria 3525
70 Ga0207658_10169337 3300025986 Bacteria 1798
71 Ga0207677_10068877 3300026023 Bacteria 2486
72 Ga0207675_100198289 3300026118 Bacteria 1927
73 Ga0307512_10053315 3300030522 Bacteria 3218
74 Ga0316177_1026947 3300030731 Bacteria 3811
75 Ga0316176_1014256 3300030732 Bacteria 8668
76 Ga0314311_1127719 3300030733 Bacteria 5170
77 Ga0316180_1144830 3300030736 Bacteria 2033
78 Ga0316182_1130581 3300030745 Bacteria 1340
79 Ga0307408_100014334 3300031548 Bacteria 5266
80 Ga0316576_10000400 3300031727 Bacteria 19993
81 Ga0316576_10003796 3300031727 Bacteria 8936
82 Ga0316578_10163028 3300031728 Bacteria 1343
83 Ga0307405_10022361 3300031731 Bacteria 3574
84 Ga0307413_10136601 3300031824 Bacteria 1687
85 Ga0307410_10019890 3300031852 Bacteria 4095
86 Ga0307407_10014898 3300031903 Bacteria 3822
87 Ga0307412_10011989 3300031911 Bacteria 5035
88 Ga0307409_100000266 3300031995 Bacteria 21213
89 Ga0307416_100012387 3300032002 Bacteria 5743
90 Ga0307416_100165415 3300032002 Bacteria 2051
91 Ga0307411_10139455 3300032005 Bacteria 1786
92 Ga0307415_100001319 3300032126 Bacteria 11746
93 Ga0307415_100016983 3300032126 Bacteria 4354
94 Ga0316585_10050627 3300032137 Bacteria 1333
95 Ga0316580_10005539 3300032139 Bacteria 3690
96 Ga0316574_0006053 3300035398 Bacteria 6502
97 Ga0316574_0025108 3300035398 Bacteria 3575
98 Ga0316574_0111592 3300035398 Unclassified 1753
99 Ga0316582_0025472 3300036647 Bacteria 3552
100 Ga0316582_0202769 3300036647 Bacteria 1353
101 Ga0316584_0001932 3300036712 Bacteria 12915
102 Ga0316584_0285346 3300036712 Bacteria 1198
103 Ga0395899_0024562 3300037312 Bacteria 4556
104 Ga0395900_0104543 3300037418 Bacteria 2909
105 Ga0395898_0067394 3300037466 Bacteria 3465
106 Ga0395898_0160324 3300037466 Bacteria 2151
107 Ga0395905_0056401 3300037471 Bacteria 3675
108 Ga0395905_0099429 3300037471 Bacteria 2732
109 Ga0316581_0000754 3300037588 Bacteria 6658
110 Ga0395901_0101979 3300038443 Bacteria 3011
111 Ga0436365_0500557 3300039437 Bacteria 1679
112 Ga0439466_0003982 3300041411 Bacteria 5698
113 Ga0439465_0010356 3300041413 Bacteria 2931
114 Ga0439442_002447 3300042002 Bacteria 3645
115 Ga0439445_0027691 3300042004 Bacteria 1457
116 Ga0439434_0026179 3300042435 Bacteria 1761
117 Ga0466972_0069310 3300044658 Bacteria 1684
118 Ga0466957_0067629 3300044842 Bacteria 2204
119 Ga0466960_0064326 3300044901 Bacteria 1808
120 Ga0496108_0041155 3300048911 Bacteria 3856
121 Ga0496109_0048985 3300048912 Bacteria 3845
122 Ga0496112_0015785 3300048915 Bacteria 7057
123 Ga0496112_0133059 3300048915 Bacteria 2458
124 Ga0501038_0342479 3300049574 Bacteria 1166
125 Ga0501040_0010398 3300049576 Bacteria 6083
126 Ga0501042_0013014 3300049578 Bacteria 5653
127 Ga0501046_0000340 3300049580 Bacteria 47112
128 Ga0501046_0238773 3300049580 Bacteria 1341
129 Ga0501047_0059370 3300049581 Bacteria 3693
130 Ga0501048_0004505 3300049582 Bacteria 10612
131 Ga0501074_0016039 3300049590 Bacteria 5445
132 Ga0501075_0059332 3300049591 Bacteria 2882
133 Ga0501076_0000873 3300049592 Bacteria 19565
134 Ga0501079_0000054 3300049741 Bacteria 51028
135 Ga0501081_0041469 3300049743 Bacteria 3152
136 Ga0501081_0107990 3300049743 Bacteria 1974
137 Ga0501045_0000589 3300049824 Bacteria 22827
138 Ga0501045_0152844 3300049824 Bacteria 1717
139 nmdc:mga00v17_3258_c1 3300050491 Bacteria 8365
140 nmdc:mga05p37_126115_c1 3300050507 Bacteria 3144
141 nmdc:mga05p37_149375_c1 3300050507 Bacteria 2859
142 nmdc:mga05p37_2429_c1 3300050507 Bacteria 21673
143 nmdc:mga05p37_249409_c1 3300050507 Bacteria 2130
144 nmdc:mga05p37_42799_c1 3300050507 Bacteria 5567
145 nmdc:mga05p37_65119_c1 3300050507 Bacteria 4485
146 nmdc:mga05p37_74511_c1 3300050507 Bacteria 4177
147 nmdc:mga09592_1978_c1 3300050508 Bacteria 16530
148 nmdc:mga09592_254_c1 3300050508 Bacteria 21587
149 nmdc:mga09592_56693_c1 3300050508 Bacteria 3311
150 nmdc:mga09592_68532_c1 3300050508 Bacteria 3009
151 nmdc:mga0qj67_238270_c1 3300050509 Bacteria 1476
152 nmdc:mga0qj67_3714_c1 3300050509 Bacteria 11015
153 nmdc:mga0qj67_45052_c1 3300050509 Bacteria 3480
154 nmdc:mga0qj67_86794_c1 3300050509 Bacteria 2511
155 nmdc:mga0qj67_9_c3 3300050509 Bacteria 22504
156 nmdc:mga06r32_115914_c1 3300050510 Bacteria 2639
157 nmdc:mga06r32_143189_c1 3300050510 Bacteria 2368
158 nmdc:mga06r32_1757_c1 3300050510 Bacteria 19452
159 nmdc:mga06r32_25078_c1 3300050510 Bacteria 5541
160 nmdc:mga06r32_3035_c1 3300050510 Bacteria 15034
161 nmdc:mga06r32_35097_c1 3300050510 Bacteria 4732
162 nmdc:mga06r32_353698_c1 3300050510 Bacteria 1453
163 nmdc:mga08y16_113308_c1 3300050511 Bacteria 2823
164 nmdc:mga0n895_138917_c1 3300050512 Bacteria 2457
165 nmdc:mga0n895_9734_c1 3300050512 Bacteria 8429
166 nmdc:mga0a205_15732_c1 3300050515 Bacteria 7072
167 nmdc:mga0a205_17096_c1 3300050515 Bacteria 6792
168 Ga0500646_0000381 3300053090 Bacteria 13327
169 Ga0500641_0001004 3300053096 Bacteria 10049
170 Ga0500588_0012668 3300053146 Bacteria 2097
171 Ga0500616_0014988 3300053153 Bacteria 4442
172 Ga0501082_0003903 3300060353 Bacteria 13024
173 Ga0530510_0008649 3300061734 Bacteria 7114
174 Ga0530510_0050865 3300061734 Bacteria 2993
175 2643890495 2643221576 Bacteria 5214352
176 2643959551 2643221590 Bacteria 5214697
177 2644032995 2643221604 Bacteria 5014917
178 2644530979 2643221696 Bacteria 5431823
179 2676486321 2675903059 Bacteria 8644972
180 2753074900 2751185734 Bacteria 8863695
181 2837187338 2837183177 Bacteria 4637169
182 2868094649 2868088558 Bacteria 7609351
183 2870726090 2870721527 Bacteria 9689237
184 2895436239 2895427314 Bacteria 13147766
185 3001121142 3001119090 Bacteria 3449530
186 8055413379 8055412473 Bacteria 6257500
187 Ga0307413_10002468
188 rootH1_10181183
189 Ga0070680_100117289
190 Ga0068868_100089464
191 Ga0070671_100049266
192 Ga0070674_100137227
193 Ga0070667_100032063
194 Ga0070667_100187779
195 Ga0070714_100049702
196 Ga0070694_100105292
197 Ga0070662_100142223
198 Ga0070707_100121466
199 Ga0070696_100210887
200 Ga0070704_100006089
201 Ga0070664_100168433
202 Ga0068859_100124667
203 Ga0068861_100070684
204 Ga0068863_100118016
205 Ga0068858_100438807
206 Ga0081538_10000265
207 Ga0075365_10000629
208 Ga0075363_100000603
209 Ga0075364_10007267
210 Ga0075362_10008066
211 Ga0075428_100000509
212 Ga0075428_100006142
213 Ga0075428_100026444
214 Ga0075428_100063671
215 Ga0075430_100003590
216 Ga0075430_100010182
217 Ga0075430_100110676
218 Ga0075430_100240268
219 Ga0075430_100247557
220 Ga0075430_100281363
221 Ga0075431_100000714
222 Ga0075431_100012029
223 Ga0075431_100024194
224 Ga0075431_100084610
225 Ga0075431_100104607
226 Ga0075431_100138326
227 Ga0075431_100151907
228 Ga0075433_10027779
229 Ga0075434_100129675
230 Ga0075429_100005140
231 Ga0075429_100014044
232 Ga0097620_100124665
233 Ga0111539_10026718
234 Ga0111539_10160616
235 Ga0105245_10033118
236 Ga0114129_10001516
237 Ga0114129_10003019
238 Ga0114129_10003188
239 Ga0114129_10169099
240 Ga0114129_10303773
241 Ga0114129_10362068
242 Ga0105249_10020657
243 Ga0105249_10043986
244 Ga0105239_10065684
245 Ga0163162_10017939
246 Ga0163162_10266245
247 Ga0163161_10060218
248 Ga0207693_10001346
249 Ga0207663_10031912
250 Ga0207662_10175668
251 Ga0207687_10009318
252 Ga0207706_10144180
253 Ga0207669_10171692
254 Ga0207712_10154615
255 Ga0207658_10036485
256 Ga0207658_10169337
257 Ga0207677_10068877
258 Ga0207675_100198289
259 Ga0307512_10053315
260 Ga0316177_1026947
261 Ga0316176_1014256
262 Ga0314311_1127719
263 Ga0316180_1144830
264 Ga0316182_1130581
265 Ga0307408_100014334
266 Ga0316576_10000400
267 Ga0316576_10003796
268 Ga0316578_10163028
269 Ga0307405_10022361
270 Ga0307413_10136601
271 Ga0307410_10019890
272 Ga0307407_10014898
273 Ga0307412_10011989
274 Ga0307409_100000266
275 Ga0307416_100012387
276 Ga0307416_100165415
277 Ga0307411_10139455
278 Ga0307415_100001319
279 Ga0307415_100016983
280 Ga0316585_10050627
281 Ga0316580_10005539
282 Ga0316574_0006053
283 Ga0316574_0025108
284 Ga0316574_0111592
285 Ga0316582_0025472
286 Ga0316582_0202769
287 Ga0316584_0001932
288 Ga0316584_0285346
289 Ga0395899_0024562
290 Ga0395900_0104543
291 Ga0395898_0067394
292 Ga0395898_0160324
293 Ga0395905_0056401
294 Ga0395905_0099429
295 Ga0316581_0000754
296 Ga0395901_0101979
297 Ga0436365_0500557
298 Ga0439466_0003982
299 Ga0439465_0010356
300 Ga0439442_002447
301 Ga0439445_0027691
302 Ga0439434_0026179
303 Ga0466972_0069310
304 Ga0466957_0067629
305 Ga0466960_0064326
306 Ga0496108_0041155
307 Ga0496109_0048985
308 Ga0496112_0015785
309 Ga0496112_0133059
310 Ga0501038_0342479
311 Ga0501040_0010398
312 Ga0501042_0013014
313 Ga0501046_0000340
314 Ga0501046_0238773
315 Ga0501047_0059370
316 Ga0501048_0004505
317 Ga0501074_0016039
318 Ga0501075_0059332
319 Ga0501076_0000873
320 Ga0501079_0000054
321 Ga0501081_0041469
322 Ga0501081_0107990
323 Ga0501045_0000589
324 Ga0501045_0152844
325 nmdc:mga00v17_3258_c1
326 nmdc:mga05p37_126115_c1
327 nmdc:mga05p37_149375_c1
328 nmdc:mga05p37_2429_c1
329 nmdc:mga05p37_249409_c1
330 nmdc:mga05p37_42799_c1
331 nmdc:mga05p37_65119_c1
332 nmdc:mga05p37_74511_c1
333 nmdc:mga09592_1978_c1
334 nmdc:mga09592_254_c1
335 nmdc:mga09592_56693_c1
336 nmdc:mga09592_68532_c1
337 nmdc:mga0qj67_238270_c1
338 nmdc:mga0qj67_3714_c1
339 nmdc:mga0qj67_45052_c1
340 nmdc:mga0qj67_86794_c1
341 nmdc:mga0qj67_9_c3
342 nmdc:mga06r32_115914_c1
343 nmdc:mga06r32_143189_c1
344 nmdc:mga06r32_1757_c1
345 nmdc:mga06r32_25078_c1
346 nmdc:mga06r32_3035_c1
347 nmdc:mga06r32_35097_c1
348 nmdc:mga06r32_353698_c1
349 nmdc:mga08y16_113308_c1
350 nmdc:mga0n895_138917_c1
351 nmdc:mga0n895_9734_c1
352 nmdc:mga0a205_15732_c1
353 nmdc:mga0a205_17096_c1
354 Ga0500646_0000381
355 Ga0500641_0001004
356 Ga0500588_0012668
357 Ga0500616_0014988
358 Ga0501082_0003903
359 Ga0530510_0008649
360 Ga0530510_0050865
361 2643890495
362 2643959551
363 2644032995
364 2644530979
365 2676486321
366 2753074900
367 2837187338
368 2868094649
369 2870726090
370 2895436239
371 3001121142
372 8055413379

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02653

BPD_transp_2

Branched-chain amino acid transport system / permease component

73

370

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
4dbl-assembly2.cif.gz_F crystal structure of e159q mutant of btucdf 0.4693 24 329
4dbl-assembly1.cif.gz_B crystal structure of e159q mutant of btucdf 0.4493 24 329
4dbl-assembly2.cif.gz_F crystal structure of e159q mutant of btucdf 0.4476 24 329
7kyp-assembly4.cif.gz_N psabc from streptococcus pneumoniae in complex with fab 0.4423 27 344
7kyp-assembly4.cif.gz_N psabc from streptococcus pneumoniae in complex with fab 0.4401 27 344
ID Description Score Start End Superfamily
af_Q58666_4_320_1.10.3470.10 Mainly Alpha;Orthogonal Bundle;ABC transporter involved in vitamin B12 uptake, BtuC;ABC transporter involved in vitamin B12 uptake, BtuC 0.7495 45 330 1.10.3470.10
af_P0AEX7_11_292_1.10.3470.10 Mainly Alpha;Orthogonal Bundle;ABC transporter involved in vitamin B12 uptake, BtuC;ABC transporter involved in vitamin B12 uptake, BtuC 0.7219 42 326 1.10.3470.10
af_P0AEX7_11_292_1.10.3470.10 Mainly Alpha;Orthogonal Bundle;ABC transporter involved in vitamin B12 uptake, BtuC;ABC transporter involved in vitamin B12 uptake, BtuC 0.715 42 326 1.10.3470.10
af_Q58665_14_295_1.10.3470.10 Mainly Alpha;Orthogonal Bundle;ABC transporter involved in vitamin B12 uptake, BtuC;ABC transporter involved in vitamin B12 uptake, BtuC 0.7027 46 330 1.10.3470.10
af_P0AFS1_34_305_1.10.3470.10 Mainly Alpha;Orthogonal Bundle;ABC transporter involved in vitamin B12 uptake, BtuC;ABC transporter involved in vitamin B12 uptake, BtuC 0.6968 47 326 1.10.3470.10
ID Description Score Start End GO Terms
AF-A0A2Z3UQ76-F1-model_v4 Branched-chain amino acid ABC transporter permease 0.9258 20 343 GO:0005886
GO:0015658
AF-A0A1V0AII9-F1-model_v4 Branched-chain amino acid ABC transporter permease 0.9227 16 353 GO:0005886
GO:0015658
AF-A0A0N0AX68-F1-model_v4 Branched-chain amino acid ABC transporter permease 0.9219 16 353 GO:0005886
GO:0015658
AF-A0A5B0AQ48-F1-model_v4 Branched-chain amino acid ABC transporter permease 0.9217 28 341 GO:0005886
GO:0015658
AF-A0A3A4BA66-F1-model_v4 Branched-chain amino acid ABC transporter permease 0.9204 1 353 GO:0005886
GO:0015658

Map