F285832

General Info

Members Datasets Scaffolds Average Seq Length
186 115 372 379

Family's Representative Sequence

Representative Sequence 3300006852|Ga0075433_10044011|Ga0075433_100440114
Length 406
Sequence MAKCCSKNELSNNTLGNEIVHPHAIIPRKTMTAAGLYVHVPFCSSRCSYCDFATGLYQRELAEAYVCALVSEIRSSRYQGQPADTIYFGGGTPSLLTPQQLDRILATLHDHFAIDHAAEITLEINPGSVDQEKLRAFRSLGVNRASFGAQTFDDAELAKLGRSHSSADTLRTFADLRDAGFTNVSFDLIAGLPGQTLAGWQRNIKQALELRPEHLSFYLLEVHQGTPLAEHIRRGIQPEPDDDLAGVMYQWMLEQASKAGYEHYEISNLCRPGFHARHNVKYWTATPYYGFGCSAHSYDGHAARWSNHRDVLKYVQTIEAGVSPIVEEQLLSETDVRAEALFLGMRLMRGVDLRHYRESFGVDLRDEHAEDLDRFCKAGLLEFDGDLIRLTRNGALLSNEVFAAFV

Samples

Sample ID Description Type Environment
1 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
2 2162886011 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v2 (version 2) Metagenome Rhizosphere
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
5 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
6 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
7 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
8 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
9 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
10 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
11 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
12 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
13 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
14 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
15 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
16 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
17 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
18 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
19 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
20 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
21 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
22 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
23 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
24 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
25 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
26 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
27 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
28 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
29 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
30 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
31 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
32 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
33 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
34 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
35 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
36 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
37 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
38 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
39 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
40 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
41 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
42 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
43 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
44 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
45 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
46 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
47 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
48 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
49 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
50 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
51 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
52 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
53 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
54 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
55 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
56 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
57 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
58 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
59 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
60 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
61 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
62 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
63 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
64 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
65 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
66 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
92 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
94 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
95 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
96 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
97 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
98 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
99 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
100 3300038996 Genetically engineered switchgrass root microbial communities from Knoxville, USA - plot19 Metagenome Rhizosphere
101 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
102 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
103 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
104 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
105 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
106 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
107 3300049707 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_B_2_drought Metagenome Rhizosphere
108 3300049765 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F14_B_4_drought Metagenome Rhizosphere
109 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
110 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
111 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
112 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
113 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
114 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
115 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 1.08
Rhizosphere 98.39
Stem 0
Stem Tuber 0
Unclassified 13.44

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075433_10044011 3300006852 Bacteria 3878
2 MRS1b_contig_7258428 2162886011 Bacteria 1860
3 rootL2_10048966 3300003322 Bacteria 9404
4 Ga0065704_10088680 3300005289 Bacteria 2919
5 Ga0065712_10011135 3300005290 Bacteria 3196
6 Ga0065712_10067727 3300005290 Bacteria 189643
7 Ga0065715_10089003 3300005293 Bacteria 17308
8 Ga0065715_10089238 3300005293 Bacteria 12055
9 Ga0065707_10021734 3300005295 Bacteria 2487
10 Ga0065707_10121281 3300005295 Bacteria 2112
11 Ga0070690_100132959 3300005330 Unclassified 1682
12 Ga0070670_100000167 3300005331 Bacteria 59452
13 Ga0070670_100000223 3300005331 Bacteria 52272
14 Ga0070677_10038468 3300005333 Unclassified 1872
15 Ga0070680_100004682 3300005336 Bacteria 10291
16 Ga0070680_100141033 3300005336 Bacteria 2021
17 Ga0070682_100000210 3300005337 Bacteria 42814
18 Ga0070682_100062801 3300005337 Bacteria 2353
19 Ga0070689_100001149 3300005340 Bacteria 16720
20 Ga0070687_100027753 3300005343 Bacteria 2738
21 Ga0070692_10018915 3300005345 Bacteria 3319
22 Ga0070692_10030868 3300005345 Bacteria 2683
23 Ga0070692_10080641 3300005345 Bacteria 1752
24 Ga0070669_100001057 3300005353 Bacteria 20127
25 Ga0070669_100115583 3300005353 Bacteria 2041
26 Ga0070705_100002007 3300005440 Bacteria 10412
27 Ga0070700_100000228 3300005441 Bacteria 30994
28 Ga0070700_100040892 3300005441 Bacteria 2840
29 Ga0070700_100072992 3300005441 Bacteria 2195
30 Ga0070700_100130427 3300005441 Bacteria 1696
31 Ga0070694_100018866 3300005444 Bacteria 4382
32 Ga0070694_100118396 3300005444 Bacteria 1897
33 Ga0070694_100154801 3300005444 Bacteria 1677
34 Ga0070681_10000402 3300005458 Bacteria 35169
35 Ga0068867_100018547 3300005459 Bacteria 4945
36 Ga0070706_100000053 3300005467 Bacteria 139565
37 Ga0070706_100167904 3300005467 Bacteria 2049
38 Ga0070698_100013379 3300005471 Bacteria 8686
39 Ga0070698_100177800 3300005471 Bacteria 2067
40 Ga0070699_100005181 3300005518 Bacteria 11468
41 Ga0070699_100011481 3300005518 Bacteria 7648
42 Ga0070679_100000918 3300005530 Bacteria 25600
43 Ga0070697_100163665 3300005536 Bacteria 1880
44 Ga0068853_100041242 3300005539 Bacteria 3941
45 Ga0070672_100141602 3300005543 Bacteria 1984
46 Ga0070686_100009060 3300005544 Bacteria 5582
47 Ga0070695_100139805 3300005545 Bacteria 1678
48 Ga0070693_100001441 3300005547 Bacteria 10717
49 Ga0070693_100038117 3300005547 Bacteria 2684
50 Ga0070704_100032817 3300005549 Unclassified 3506
51 Ga0070704_100055737 3300005549 Unclassified 2804
52 Ga0070704_100151834 3300005549 Bacteria 1822
53 Ga0068855_100246057 3300005563 Bacteria 1996
54 Ga0068857_100062969 3300005577 Bacteria 3297
55 Ga0068857_100120577 3300005577 Bacteria 2361
56 Ga0070702_100038195 3300005615 Unclassified 2672
57 Ga0068859_100029656 3300005617 Bacteria 5490
58 Ga0068859_100029940 3300005617 Bacteria 5461
59 Ga0068859_100030846 3300005617 Bacteria 5380
60 Ga0068859_100035102 3300005617 Bacteria 5031
61 Ga0068859_100120735 3300005617 Bacteria 2687
62 Ga0068864_100001837 3300005618 Bacteria 17465
63 Ga0068861_100021206 3300005719 Bacteria 4669
64 Ga0068861_100051813 3300005719 Bacteria 3118
65 Ga0068851_10004077 3300005834 Bacteria 6561
66 Ga0068863_100013945 3300005841 Bacteria 7747
67 Ga0068863_100040467 3300005841 Unclassified 4432
68 Ga0068863_100281959 3300005841 Bacteria 1610
69 Ga0068858_100038123 3300005842 Bacteria 4457
70 Ga0068858_100049059 3300005842 Bacteria 3910
71 Ga0068858_100111751 3300005842 Bacteria 2552
72 Ga0068860_100007491 3300005843 Bacteria 10917
73 Ga0068860_100085115 3300005843 Bacteria 3008
74 Ga0068860_100135478 3300005843 Bacteria 2365
75 Ga0081539_10067384 3300005985 Bacteria 1936
76 Ga0097621_100009368 3300006237 Bacteria 7106
77 Ga0075430_100138487 3300006846 Unclassified 2027
78 Ga0075433_10006431 3300006852 Bacteria 9293
79 Ga0075433_10029773 3300006852 Bacteria 4654
80 Ga0075436_100003178 3300006914 Bacteria 11268
81 Ga0097620_100029655 3300006931 Bacteria 5490
82 Ga0097620_100029940 3300006931 Bacteria 5461
83 Ga0097620_100030845 3300006931 Bacteria 5380
84 Ga0097620_100035100 3300006931 Bacteria 5031
85 Ga0097620_100120732 3300006931 Bacteria 2687
86 Ga0075435_100003844 3300007076 Bacteria 10243
87 Ga0105240_10031657 3300009093 Bacteria 6854
88 Ga0111539_10002973 3300009094 Bacteria 22481
89 Ga0114129_10024237 3300009147 Bacteria 8598
90 Ga0114129_10055846 3300009147 Bacteria 5534
91 Ga0114129_10186349 3300009147 Unclassified 2820
92 Ga0114129_10428422 3300009147 Bacteria 1739
93 Ga0105243_10350437 3300009148 Bacteria 1355
94 Ga0105241_10084328 3300009174 Bacteria 2495
95 Ga0105241_10100084 3300009174 Bacteria 2303
96 Ga0105248_10002794 3300009177 Bacteria 19403
97 Ga0105248_10207915 3300009177 Bacteria 2205
98 Ga0105248_10539813 3300009177 Bacteria 1315
99 Ga0105237_10001338 3300009545 Bacteria 32668
100 Ga0105238_10051451 3300009551 Bacteria 4143
101 Ga0105249_10001434 3300009553 Bacteria 20879
102 Ga0105249_10048210 3300009553 Unclassified 3884
103 Ga0105246_10083478 3300011119 Unclassified 2283
104 Ga0157373_10021382 3300013100 Bacteria 4700
105 Ga0163162_10003942 3300013306 Bacteria 14234
106 Ga0163162_10338310 3300013306 Bacteria 1637
107 Ga0157372_10019979 3300013307 Bacteria 7221
108 Ga0157375_10035454 3300013308 Bacteria 4762
109 Ga0157375_10053481 3300013308 Bacteria 3973
110 Ga0157375_10194681 3300013308 Unclassified 2182
111 Ga0157375_10337744 3300013308 Bacteria 1672
112 Ga0157375_10399289 3300013308 Bacteria 1541
113 Ga0163163_10046064 3300014325 Bacteria 4283
114 Ga0157380_10067281 3300014326 Unclassified 2884
115 Ga0157379_10066299 3300014968 Bacteria 3227
116 Ga0157379_10071230 3300014968 Bacteria 3110
117 Ga0157379_10075217 3300014968 Unclassified 3023
118 Ga0207656_10002296 3300025321 Bacteria 6423
119 Ga0207643_10001390 3300025908 Bacteria 13893
120 Ga0207643_10025668 3300025908 Bacteria 3258
121 Ga0207684_10000053 3300025910 Bacteria 225260
122 Ga0207654_10039540 3300025911 Bacteria 2653
123 Ga0207707_10000033 3300025912 Bacteria 158362
124 Ga0207671_10025362 3300025914 Bacteria 4454
125 Ga0207660_10007253 3300025917 Bacteria 7175
126 Ga0207660_10021583 3300025917 Bacteria 4332
127 Ga0207662_10012641 3300025918 Bacteria 4705
128 Ga0207662_10024267 3300025918 Bacteria 3488
129 Ga0207652_10000032 3300025921 Bacteria 143319
130 Ga0207681_10000486 3300025923 Bacteria 27828
131 Ga0207681_10087752 3300025923 Unclassified 2214
132 Ga0207694_10021193 3300025924 Bacteria 4923
133 Ga0207650_10000007 3300025925 Bacteria 530810
134 Ga0207650_10000486 3300025925 Bacteria 33106
135 Ga0207650_10104869 3300025925 Bacteria 2181
136 Ga0207644_10046652 3300025931 Bacteria 3088
137 Ga0207706_10035605 3300025933 Unclassified 4425
138 Ga0207706_10083359 3300025933 Bacteria 2811
139 Ga0207670_10000302 3300025936 Bacteria 29606
140 Ga0207711_10026070 3300025941 Unclassified 4903
141 Ga0207651_10204855 3300025960 Bacteria 1584
142 Ga0207703_10186892 3300026035 Unclassified 1832
143 Ga0207639_10007176 3300026041 Bacteria 7592
144 Ga0207708_10000096 3300026075 Bacteria 67574
145 Ga0207708_10046501 3300026075 Bacteria 3305
146 Ga0207708_10056808 3300026075 Bacteria 2986
147 Ga0207641_10027638 3300026088 Unclassified 4686
148 Ga0207641_10087165 3300026088 Bacteria 2723
149 Ga0207648_10055036 3300026089 Bacteria 3474
150 Ga0207676_10000399 3300026095 Bacteria 36665
151 Ga0207676_10018210 3300026095 Bacteria 5102
152 Ga0207676_10185462 3300026095 Unclassified 1825
153 Ga0207676_10250215 3300026095 Bacteria 1595
154 Ga0207674_10169092 3300026116 Bacteria 2140
155 Ga0207674_10232466 3300026116 Bacteria 1791
156 Ga0207675_100001820 3300026118 Bacteria 21377
157 Ga0207675_100045176 3300026118 Bacteria 4115
158 Ga0207675_100047815 3300026118 Bacteria 3993
159 Ga0207428_10031530 3300027907 Bacteria 4370
160 Ga0268264_10018392 3300028381 Bacteria 5714
161 Ga0268264_10119687 3300028381 Bacteria 2319
162 Ga0268264_10172024 3300028381 Bacteria 1960
163 Ga0307408_100329855 3300031548 Bacteria 1288
164 Ga0307405_10058997 3300031731 Unclassified 2417
165 Ga0307412_10143278 3300031911 Unclassified 1753
166 Ga0307411_10087053 3300032005 Bacteria 2169
167 Ga0307415_100147722 3300032126 Unclassified 1805
168 Ga0373951_0001569 3300035091 Bacteria 5984
169 Ga0373942_0005081 3300035207 Bacteria 3051
170 Ga0242420_004927 3300038996 Bacteria 2043
171 Ga0495610_0039579 3300046512 Unclassified 2383
172 Ga0496108_0372738 3300048911 Unclassified 1246
173 Ga0496112_0203078 3300048915 Bacteria 1941
174 Ga0501038_0000633 3300049574 Bacteria 31307
175 Ga0501217_006318 3300049661 Bacteria 2513
176 Ga0501227_011159 3300049665 Bacteria 1955
177 Ga0501227_025708 3300049665 Bacteria 1383
178 Ga0501234_011250 3300049707 Bacteria 1399
179 Ga0501268_004751 3300049765 Unclassified 1926
180 Ga0501045_0220511 3300049824 Bacteria 1412
181 nmdc:mga05p37_22194_c1 3300050507 Bacteria 7695
182 nmdc:mga09592_60191_c1 3300050508 Bacteria 3210
183 nmdc:mga08y16_15988_c1 3300050511 Bacteria 7888
184 nmdc:mga0rr50_146277_c1 3300050513 Bacteria 1906
185 nmdc:mga08x19_856_c1 3300050514 Bacteria 19311
186 nmdc:mga0a205_243110_c1 3300050515 Bacteria 1681
187 Ga0075433_10044011
188 MRS1b_contig_7258428
189 rootL2_10048966
190 Ga0065704_10088680
191 Ga0065712_10011135
192 Ga0065712_10067727
193 Ga0065715_10089003
194 Ga0065715_10089238
195 Ga0065707_10021734
196 Ga0065707_10121281
197 Ga0070690_100132959
198 Ga0070670_100000167
199 Ga0070670_100000223
200 Ga0070677_10038468
201 Ga0070680_100004682
202 Ga0070680_100141033
203 Ga0070682_100000210
204 Ga0070682_100062801
205 Ga0070689_100001149
206 Ga0070687_100027753
207 Ga0070692_10018915
208 Ga0070692_10030868
209 Ga0070692_10080641
210 Ga0070669_100001057
211 Ga0070669_100115583
212 Ga0070705_100002007
213 Ga0070700_100000228
214 Ga0070700_100040892
215 Ga0070700_100072992
216 Ga0070700_100130427
217 Ga0070694_100018866
218 Ga0070694_100118396
219 Ga0070694_100154801
220 Ga0070681_10000402
221 Ga0068867_100018547
222 Ga0070706_100000053
223 Ga0070706_100167904
224 Ga0070698_100013379
225 Ga0070698_100177800
226 Ga0070699_100005181
227 Ga0070699_100011481
228 Ga0070679_100000918
229 Ga0070697_100163665
230 Ga0068853_100041242
231 Ga0070672_100141602
232 Ga0070686_100009060
233 Ga0070695_100139805
234 Ga0070693_100001441
235 Ga0070693_100038117
236 Ga0070704_100032817
237 Ga0070704_100055737
238 Ga0070704_100151834
239 Ga0068855_100246057
240 Ga0068857_100062969
241 Ga0068857_100120577
242 Ga0070702_100038195
243 Ga0068859_100029656
244 Ga0068859_100029940
245 Ga0068859_100030846
246 Ga0068859_100035102
247 Ga0068859_100120735
248 Ga0068864_100001837
249 Ga0068861_100021206
250 Ga0068861_100051813
251 Ga0068851_10004077
252 Ga0068863_100013945
253 Ga0068863_100040467
254 Ga0068863_100281959
255 Ga0068858_100038123
256 Ga0068858_100049059
257 Ga0068858_100111751
258 Ga0068860_100007491
259 Ga0068860_100085115
260 Ga0068860_100135478
261 Ga0081539_10067384
262 Ga0097621_100009368
263 Ga0075430_100138487
264 Ga0075433_10006431
265 Ga0075433_10029773
266 Ga0075436_100003178
267 Ga0097620_100029655
268 Ga0097620_100029940
269 Ga0097620_100030845
270 Ga0097620_100035100
271 Ga0097620_100120732
272 Ga0075435_100003844
273 Ga0105240_10031657
274 Ga0111539_10002973
275 Ga0114129_10024237
276 Ga0114129_10055846
277 Ga0114129_10186349
278 Ga0114129_10428422
279 Ga0105243_10350437
280 Ga0105241_10084328
281 Ga0105241_10100084
282 Ga0105248_10002794
283 Ga0105248_10207915
284 Ga0105248_10539813
285 Ga0105237_10001338
286 Ga0105238_10051451
287 Ga0105249_10001434
288 Ga0105249_10048210
289 Ga0105246_10083478
290 Ga0157373_10021382
291 Ga0163162_10003942
292 Ga0163162_10338310
293 Ga0157372_10019979
294 Ga0157375_10035454
295 Ga0157375_10053481
296 Ga0157375_10194681
297 Ga0157375_10337744
298 Ga0157375_10399289
299 Ga0163163_10046064
300 Ga0157380_10067281
301 Ga0157379_10066299
302 Ga0157379_10071230
303 Ga0157379_10075217
304 Ga0207656_10002296
305 Ga0207643_10001390
306 Ga0207643_10025668
307 Ga0207684_10000053
308 Ga0207654_10039540
309 Ga0207707_10000033
310 Ga0207671_10025362
311 Ga0207660_10007253
312 Ga0207660_10021583
313 Ga0207662_10012641
314 Ga0207662_10024267
315 Ga0207652_10000032
316 Ga0207681_10000486
317 Ga0207681_10087752
318 Ga0207694_10021193
319 Ga0207650_10000007
320 Ga0207650_10000486
321 Ga0207650_10104869
322 Ga0207644_10046652
323 Ga0207706_10035605
324 Ga0207706_10083359
325 Ga0207670_10000302
326 Ga0207711_10026070
327 Ga0207651_10204855
328 Ga0207703_10186892
329 Ga0207639_10007176
330 Ga0207708_10000096
331 Ga0207708_10046501
332 Ga0207708_10056808
333 Ga0207641_10027638
334 Ga0207641_10087165
335 Ga0207648_10055036
336 Ga0207676_10000399
337 Ga0207676_10018210
338 Ga0207676_10185462
339 Ga0207676_10250215
340 Ga0207674_10169092
341 Ga0207674_10232466
342 Ga0207675_100001820
343 Ga0207675_100045176
344 Ga0207675_100047815
345 Ga0207428_10031530
346 Ga0268264_10018392
347 Ga0268264_10119687
348 Ga0268264_10172024
349 Ga0307408_100329855
350 Ga0307405_10058997
351 Ga0307412_10143278
352 Ga0307411_10087053
353 Ga0307415_100147722
354 Ga0373951_0001569
355 Ga0373942_0005081
356 Ga0242420_004927
357 Ga0495610_0039579
358 Ga0496108_0372738
359 Ga0496112_0203078
360 Ga0501038_0000633
361 Ga0501217_006318
362 Ga0501227_011159
363 Ga0501227_025708
364 Ga0501234_011250
365 Ga0501268_004751
366 Ga0501045_0220511
367 nmdc:mga05p37_22194_c1
368 nmdc:mga09592_60191_c1
369 nmdc:mga08y16_15988_c1
370 nmdc:mga0rr50_146277_c1
371 nmdc:mga08x19_856_c1
372 nmdc:mga0a205_243110_c1

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF06969

HemN_C

HemN C-terminal domain

331

397

0.98

PF04055

Radical_SAM

Radical SAM superfamily

37

207

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
1olt-assembly1.cif.gz_A coproporphyrinogen iii oxidase (hemn) from escherichia coli is a radical sam enzyme. 0.8623 3 378
1olt-assembly1.cif.gz_A coproporphyrinogen iii oxidase (hemn) from escherichia coli is a radical sam enzyme. 0.8538 3 378
8asw-assembly1.cif.gz_C cryo-em structure of yeast elp123 in complex with alanine trna 0.7738 3 226
6fd2-assembly1.cif.gz_B radical sam 1,2-diol dehydratase aprd4 in complex with its substrate paromamine 0.7499 36 208
5fep-assembly1.cif.gz_A hyde from t. maritima in complex with (2r,4r)-metda 0.7414 3 225
ID Description Score Start End Superfamily
af_Q5SUV1_33_283_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9383 2 248 3.20.20.70
af_A4IGH2_157_284_3.30.750.200 Alpha Beta;2-Layer Sandwich;Transcription Regulator spoIIAA; 0.9342 119 244 3.30.750.200
af_P9WP73_8_223_3.80.30.20 Alpha Beta;Alpha-Beta Horseshoe;pyruvate-formate lyase- activating enzyme;tm_1862 like domain 0.9258 7 218 3.80.30.20
af_Q2FXY9_297_360_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9231 305 367 1.10.10.10
af_Q2FXY9_7_216_3.80.30.20 Alpha Beta;Alpha-Beta Horseshoe;pyruvate-formate lyase- activating enzyme;tm_1862 like domain 0.9218 7 222 3.80.30.20
ID Description Score Start End GO Terms
AF-A0A4R5P274-F1-model_v4 Heme chaperone HemW 0.9725 3 378 GO:0004109
GO:0005737
GO:0006779
GO:0046872
GO:0051539
AF-A0A7C7WY80-F1-model_v4 deleted 0.9724 4 378
AF-A0A443YPK8-F1-model_v4 Heme chaperone HemW 0.9714 4 378 GO:0004109
GO:0005737
GO:0006779
GO:0046872
GO:0051539
AF-A0A3A4S0G9-F1-model_v4 Heme chaperone HemW 0.9702 2 378 GO:0004109
GO:0005737
GO:0006779
GO:0046872
GO:0051539
AF-A0A1H6Y3U6-F1-model_v4 Heme chaperone HemW 0.9698 4 378 GO:0004109
GO:0005737
GO:0006779
GO:0046872
GO:0051539

Map