F285703

General Info

Members Datasets Scaffolds Average Seq Length
186 136 372 317

Family's Representative Sequence

Representative Sequence 3300005615|Ga0070702_100066282|Ga0070702_1000662822
Length 335
Sequence MRAVIAPDPGGPDALVVADLPDPKPGPGELVIDMAATAVNRADTLQRQGFYPPPPGASDVLGLECSGVVSAVGEGVEAWSVGDEVCALLAGGGYGEKVLVPAGQVMPVPDGLDLVTAGALPEVACTVWSNVFMIAGLREDETLLVHGGGGGIGTFAIQLAHALGARVLTTAGSEEKLEVCRSLGADVAINYREQDFVEEVAKATDGKGADVILDNMGAKYLPRNVDALATEGRLVVIGMQGGTKAELDLGVLMRKRGAVIATSLRARPVDEKAAICASVVEHVWPIVADGAIRVLVHTSLPLEEAGEAHRIMEASDHVGKIVLTSGGTAPRKVGA

Samples

Sample ID Description Type Environment
1 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
2 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
5 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
6 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
7 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
8 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
9 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
10 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
11 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
12 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
13 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
14 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
15 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
16 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
17 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
18 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
19 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
20 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
21 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
22 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
23 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
24 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
25 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
26 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
27 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
28 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
29 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
30 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
31 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
32 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
33 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
34 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
35 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
36 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
37 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
38 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
39 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
40 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
41 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
42 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
43 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
44 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
45 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
67 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
69 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
70 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
71 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
72 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
73 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
74 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
75 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
76 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
77 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
78 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
79 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
80 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
81 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
82 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
83 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
84 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
85 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
86 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
87 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
88 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
89 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
90 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
91 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
92 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
93 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
94 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
95 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
96 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
97 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
98 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
99 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
100 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
101 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
102 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
103 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
104 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
105 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
106 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
107 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
108 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
109 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
110 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
111 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
112 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
113 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
114 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
115 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
116 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
117 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
118 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
119 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
120 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
121 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
122 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
123 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
124 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
125 2643221561 Nocardioides sp. Root151 Isolate Unclassified
126 2643221617 Nocardioides sp. Root79 Isolate Unclassified
127 2643221620 Nocardioides sp. Root240 Isolate Unclassified
128 2643221696 Nocardioides sp. Root140 Isolate Unclassified
129 2675903058 Actinopolymorpha cephalotaxi CPCC 202808 Isolate Rhizosphere
130 2738541305 Nocardioides sp. CF167 Isolate Unclassified
131 2739367898 Nocardioides sp. CF479 Isolate Unclassified
132 2827628540 Actinopolymorpha cephalotaxi DSM 45117 Isolate Rhizosphere
133 2855386786 Nocardioides ferulae EGI 63112 Isolate Unclassified
134 2984576629 Nocardioides zeae SORGH_AS913 Isolate Aerial Root
135 2990256926 Nocardioides zeae SORGH_AS885 Isolate Aerial Root
136 8054609563 Nocardioides astragali CGMCC 4.7327 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 93.01
Metatranscriptomes 0.54
Isolates 6.45

Biome Distribution

Category Percentage (%)
Aerial Root 1.08
Bulb 0
Endosphere 6.45
Nodule 0.54
Rhizoplane 6.99
Rhizosphere 79.57
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070702_100066282 3300005615 Bacteria 2117
2 Ga0006562J51391_1075868 3300003578 Bacteria 3669
3 Ga0070683_100019723 3300005329 Bacteria 5992
4 Ga0070683_100060348 3300005329 Bacteria 3525
5 Ga0070683_100082159 3300005329 Bacteria 3017
6 Ga0070683_100103529 3300005329 Bacteria 2683
7 Ga0068868_100477014 3300005338 Bacteria 1089
8 Ga0070691_10038943 3300005341 Bacteria 2245
9 Ga0070692_10106941 3300005345 Bacteria 1542
10 Ga0070668_100148835 3300005347 Bacteria 1891
11 Ga0070675_100340685 3300005354 Bacteria 1328
12 Ga0070674_100036047 3300005356 Bacteria 3318
13 Ga0070673_100029895 3300005364 Bacteria 4068
14 Ga0070714_100012348 3300005435 Bacteria 6818
15 Ga0070701_10143522 3300005438 Bacteria 1368
16 Ga0070700_100022170 3300005441 Bacteria 3700
17 Ga0070708_100333564 3300005445 Bacteria 1429
18 Ga0068867_100023756 3300005459 Bacteria 4390
19 Ga0070685_10039304 3300005466 Bacteria 2687
20 Ga0070698_100001974 3300005471 Bacteria 22807
21 Ga0070679_100305588 3300005530 Bacteria 1541
22 Ga0070672_100018408 3300005543 Bacteria 5051
23 Ga0068852_100056535 3300005616 Bacteria 3391
24 Ga0068861_100011139 3300005719 Bacteria 6243
25 Ga0068860_100000253 3300005843 Bacteria 79802
26 Ga0068862_100200079 3300005844 Bacteria 1801
27 Ga0075365_10000516 3300006038 Bacteria 14767
28 Ga0075365_10064960 3300006038 Bacteria 2445
29 Ga0075363_100005425 3300006048 Bacteria 5668
30 Ga0075363_100054851 3300006048 Bacteria 2133
31 Ga0075367_10042837 3300006178 Bacteria 2650
32 Ga0075370_10076876 3300006353 Bacteria 1915
33 Ga0075430_100041589 3300006846 Bacteria 3888
34 Ga0075429_100055184 3300006880 Bacteria 3457
35 Ga0068865_100009738 3300006881 Bacteria 5960
36 Ga0111539_10047528 3300009094 Bacteria 5128
37 Ga0105245_10021270 3300009098 Bacteria 5688
38 Ga0105245_10470589 3300009098 Bacteria 1268
39 Ga0114129_10005624 3300009147 Bacteria 17733
40 Ga0105243_10026734 3300009148 Bacteria 4419
41 Ga0105243_10061708 3300009148 Bacteria 2999
42 Ga0105248_10204031 3300009177 Bacteria 2228
43 Ga0105238_10127336 3300009551 Bacteria 2525
44 Ga0105239_10134984 3300010375 Bacteria 2747
45 Ga0105239_10183847 3300010375 Bacteria 2339
46 Ga0163162_10645978 3300013306 Bacteria 1182
47 Ga0157372_10211184 3300013307 Bacteria 2249
48 Ga0157375_10104816 3300013308 Bacteria 2917
49 Ga0163163_10011558 3300014325 Bacteria 8017
50 Ga0163163_10255628 3300014325 Bacteria 1803
51 Ga0157380_10015490 3300014326 Bacteria 5605
52 Ga0157377_10077413 3300014745 Bacteria 1937
53 Ga0163161_10002659 3300017792 Bacteria 12700
54 Ga0207688_10014814 3300025901 Bacteria 4232
55 Ga0207643_10006949 3300025908 Bacteria 6071
56 Ga0207707_10226716 3300025912 Bacteria 1626
57 Ga0207652_10276622 3300025921 Bacteria 1514
58 Ga0207681_10151807 3300025923 Bacteria 1737
59 Ga0207694_10166854 3300025924 Bacteria 1781
60 Ga0207687_10164095 3300025927 Bacteria 1708
61 Ga0207664_10012888 3300025929 Bacteria 5991
62 Ga0207709_10120551 3300025935 Bacteria 1770
63 Ga0207669_10050574 3300025937 Bacteria 2485
64 Ga0207691_10007188 3300025940 Bacteria 10741
65 Ga0207691_10127768 3300025940 Bacteria 2248
66 Ga0207711_10466312 3300025941 Bacteria 1176
67 Ga0207689_10061486 3300025942 Bacteria 3088
68 Ga0207661_10036729 3300025944 Bacteria 3827
69 Ga0207661_10093929 3300025944 Bacteria 2504
70 Ga0207661_10094823 3300025944 Bacteria 2493
71 Ga0207651_10108595 3300025960 Bacteria 2077
72 Ga0207712_10115207 3300025961 Bacteria 2023
73 Ga0207677_10401604 3300026023 Bacteria 1162
74 Ga0207677_10450335 3300026023 Bacteria 1103
75 Ga0207708_10009539 3300026075 Bacteria 7196
76 Ga0207708_10116078 3300026075 Bacteria 2082
77 Ga0207708_10143633 3300026075 Bacteria 1874
78 Ga0207702_10122357 3300026078 Bacteria 2330
79 Ga0207648_10006602 3300026089 Bacteria 11518
80 Ga0207648_10119057 3300026089 Bacteria 2321
81 Ga0207675_100006766 3300026118 Bacteria 10843
82 Ga0207675_100034560 3300026118 Bacteria 4713
83 Ga0207675_100373605 3300026118 Bacteria 1401
84 Ga0207428_10073519 3300027907 Bacteria 2682
85 Ga0268265_10145844 3300028380 Bacteria 1989
86 Ga0307408_100054691 3300031548 Bacteria 2887
87 Ga0307413_10034304 3300031824 Bacteria 2899
88 Ga0307410_10015684 3300031852 Bacteria 4502
89 Ga0307410_10039803 3300031852 Bacteria 3089
90 Ga0307406_10410292 3300031901 Bacteria 1076
91 Ga0307407_10033566 3300031903 Bacteria 2802
92 Ga0307407_10074241 3300031903 Bacteria 2034
93 Ga0307407_10115244 3300031903 Bacteria 1694
94 Ga0307412_10049464 3300031911 Bacteria 2770
95 Ga0307412_10112175 3300031911 Bacteria 1949
96 Ga0307409_100042175 3300031995 Bacteria 3415
97 Ga0307416_100056781 3300032002 Bacteria 3162
98 Ga0307411_10023400 3300032005 Bacteria 3659
99 Ga0307510_10223152 3300033180 Bacteria 1394
100 Ga0373931_0138630 3300035691 Bacteria 1407
101 Ga0395899_0027146 3300037312 Bacteria 4319
102 Ga0395900_0139082 3300037418 Bacteria 2487
103 Ga0395898_0038960 3300037466 Bacteria 4706
104 Ga0395898_0186744 3300037466 Bacteria 1981
105 Ga0395901_0070199 3300038443 Bacteria 3649
106 Ga0395901_0114080 3300038443 Bacteria 2838
107 Ga0466969_0014900 3300044656 Bacteria 4080
108 Ga0466972_0014528 3300044658 Bacteria 3943
109 Ga0466972_0118519 3300044658 Bacteria 1249
110 Ga0466966_0158928 3300044684 Bacteria 1376
111 Ga0466961_0004768 3300044693 Bacteria 8536
112 Ga0466961_0016834 3300044693 Bacteria 4699
113 Ga0466961_0029443 3300044693 Bacteria 3530
114 Ga0466961_0040348 3300044693 Bacteria 2993
115 Ga0466963_0012309 3300044694 Bacteria 5231
116 Ga0466963_0061453 3300044694 Bacteria 2511
117 Ga0466964_0036085 3300044706 Bacteria 1980
118 Ga0466971_0008559 3300044719 Bacteria 4464
119 Ga0466970_0046051 3300044765 Bacteria 2323
120 Ga0466970_0103716 3300044765 Bacteria 1550
121 Ga0466957_0035328 3300044842 Bacteria 2999
122 Ga0466960_0004406 3300044901 Bacteria 5502
123 Ga0466960_0029168 3300044901 Bacteria 2531
124 Ga0466959_0016435 3300045049 Bacteria 5407
125 Ga0466967_0051839 3300045976 Bacteria 3598
126 Ga0466967_0269203 3300045976 Bacteria 1632
127 Ga0466967_0319038 3300045976 Bacteria 1498
128 Ga0496100_0348329 3300048903 Bacteria 1118
129 Ga0496102_0004983 3300048905 Bacteria 11245
130 Ga0496102_0139600 3300048905 Bacteria 2272
131 Ga0496103_0012177 3300048906 Bacteria 5111
132 Ga0496103_0023492 3300048906 Bacteria 3718
133 Ga0496106_0014929 3300048909 Bacteria 5745
134 Ga0496107_0104723 3300048910 Bacteria 2076
135 Ga0496108_0512647 3300048911 Bacteria 1047
136 Ga0496111_0046173 3300048914 Bacteria 3135
137 Ga0496114_0116350 3300048917 Bacteria 2295
138 Ga0496114_0168578 3300048917 Bacteria 1907
139 Ga0496115_0002510 3300048918 Bacteria 13178
140 Ga0496115_0240433 3300048918 Bacteria 1492
141 Ga0496124_0079588 3300048927 Bacteria 2698
142 Ga0501031_0062431 3300049568 Bacteria 2428
143 Ga0501031_0139570 3300049568 Bacteria 1584
144 Ga0501036_0232675 3300049572 Bacteria 1546
145 Ga0501039_0087480 3300049575 Bacteria 2427
146 Ga0501039_0215695 3300049575 Bacteria 1509
147 Ga0501040_0095248 3300049576 Bacteria 2072
148 Ga0501040_0272714 3300049576 Bacteria 1208
149 Ga0501042_0087902 3300049578 Bacteria 2230
150 Ga0501046_0241287 3300049580 Bacteria 1333
151 Ga0501048_0083694 3300049582 Bacteria 2250
152 Ga0501048_0107804 3300049582 Bacteria 1967
153 Ga0501048_0114271 3300049582 Bacteria 1907
154 Ga0501067_0000474 3300049583 Bacteria 21854
155 Ga0501067_0008079 3300049583 Bacteria 5847
156 Ga0501067_0029691 3300049583 Bacteria 3030
157 Ga0501067_0062020 3300049583 Bacteria 2070
158 Ga0501068_0083114 3300049584 Bacteria 1968
159 Ga0501069_0004333 3300049585 Bacteria 7332
160 Ga0501069_0005771 3300049585 Bacteria 6449
161 Ga0501076_0159034 3300049592 Bacteria 1840
162 nmdc:mga03n38_142071_c1 3300050490 Bacteria 1200
163 nmdc:mga0yw44_146904_c1 3300050492 Bacteria 1536
164 nmdc:mga0yw44_265589_c1 3300050492 Bacteria 1145
165 nmdc:mga0yw44_31574_c1 3300050492 Bacteria 3081
166 nmdc:mga0yw44_76371_c1 3300050492 Bacteria 2091
167 nmdc:mga06z11_15428_c1 3300050494 Bacteria 3410
168 nmdc:mga05p37_178947_c1 3300050507 Bacteria 2582
169 nmdc:mga0qj67_8086_c1 3300050509 Bacteria 7784
170 nmdc:mga08y16_130909_c1 3300050511 Bacteria 2609
171 Ga0501084_0207379 3300054114 Bacteria 1654
172 Ga0466962_0010923 3300061719 Bacteria 4366
173 Ga0466962_0029109 3300061719 Bacteria 2643
174 Ga0530510_0031157 3300061734 Bacteria 3834
175 2643825077 2643221561 Bacteria 4984412
176 2644100884 2643221617 Bacteria 5139111
177 2644117293 2643221620 Bacteria 5134593
178 2644534617 2643221696 Bacteria 5431823
179 2676476323 2675903058 Bacteria 6822861
180 2738869113 2738541305 Bacteria 4910150
181 2740168743 2739367898 Bacteria 4367674
182 2827634154 2827628540 Bacteria 6858585
183 2855390413 2855386786 Bacteria 4752232
184 2984577925 2984576629 Bacteria 4248407
185 2990260105 2990256926 Bacteria 4252839
186 8054611661 8054609563 Bacteria 5170090
187 Ga0070702_100066282
188 Ga0006562J51391_1075868
189 Ga0070683_100019723
190 Ga0070683_100060348
191 Ga0070683_100082159
192 Ga0070683_100103529
193 Ga0068868_100477014
194 Ga0070691_10038943
195 Ga0070692_10106941
196 Ga0070668_100148835
197 Ga0070675_100340685
198 Ga0070674_100036047
199 Ga0070673_100029895
200 Ga0070714_100012348
201 Ga0070701_10143522
202 Ga0070700_100022170
203 Ga0070708_100333564
204 Ga0068867_100023756
205 Ga0070685_10039304
206 Ga0070698_100001974
207 Ga0070679_100305588
208 Ga0070672_100018408
209 Ga0068852_100056535
210 Ga0068861_100011139
211 Ga0068860_100000253
212 Ga0068862_100200079
213 Ga0075365_10000516
214 Ga0075365_10064960
215 Ga0075363_100005425
216 Ga0075363_100054851
217 Ga0075367_10042837
218 Ga0075370_10076876
219 Ga0075430_100041589
220 Ga0075429_100055184
221 Ga0068865_100009738
222 Ga0111539_10047528
223 Ga0105245_10021270
224 Ga0105245_10470589
225 Ga0114129_10005624
226 Ga0105243_10026734
227 Ga0105243_10061708
228 Ga0105248_10204031
229 Ga0105238_10127336
230 Ga0105239_10134984
231 Ga0105239_10183847
232 Ga0163162_10645978
233 Ga0157372_10211184
234 Ga0157375_10104816
235 Ga0163163_10011558
236 Ga0163163_10255628
237 Ga0157380_10015490
238 Ga0157377_10077413
239 Ga0163161_10002659
240 Ga0207688_10014814
241 Ga0207643_10006949
242 Ga0207707_10226716
243 Ga0207652_10276622
244 Ga0207681_10151807
245 Ga0207694_10166854
246 Ga0207687_10164095
247 Ga0207664_10012888
248 Ga0207709_10120551
249 Ga0207669_10050574
250 Ga0207691_10007188
251 Ga0207691_10127768
252 Ga0207711_10466312
253 Ga0207689_10061486
254 Ga0207661_10036729
255 Ga0207661_10093929
256 Ga0207661_10094823
257 Ga0207651_10108595
258 Ga0207712_10115207
259 Ga0207677_10401604
260 Ga0207677_10450335
261 Ga0207708_10009539
262 Ga0207708_10116078
263 Ga0207708_10143633
264 Ga0207702_10122357
265 Ga0207648_10006602
266 Ga0207648_10119057
267 Ga0207675_100006766
268 Ga0207675_100034560
269 Ga0207675_100373605
270 Ga0207428_10073519
271 Ga0268265_10145844
272 Ga0307408_100054691
273 Ga0307413_10034304
274 Ga0307410_10015684
275 Ga0307410_10039803
276 Ga0307406_10410292
277 Ga0307407_10033566
278 Ga0307407_10074241
279 Ga0307407_10115244
280 Ga0307412_10049464
281 Ga0307412_10112175
282 Ga0307409_100042175
283 Ga0307416_100056781
284 Ga0307411_10023400
285 Ga0307510_10223152
286 Ga0373931_0138630
287 Ga0395899_0027146
288 Ga0395900_0139082
289 Ga0395898_0038960
290 Ga0395898_0186744
291 Ga0395901_0070199
292 Ga0395901_0114080
293 Ga0466969_0014900
294 Ga0466972_0014528
295 Ga0466972_0118519
296 Ga0466966_0158928
297 Ga0466961_0004768
298 Ga0466961_0016834
299 Ga0466961_0029443
300 Ga0466961_0040348
301 Ga0466963_0012309
302 Ga0466963_0061453
303 Ga0466964_0036085
304 Ga0466971_0008559
305 Ga0466970_0046051
306 Ga0466970_0103716
307 Ga0466957_0035328
308 Ga0466960_0004406
309 Ga0466960_0029168
310 Ga0466959_0016435
311 Ga0466967_0051839
312 Ga0466967_0269203
313 Ga0466967_0319038
314 Ga0496100_0348329
315 Ga0496102_0004983
316 Ga0496102_0139600
317 Ga0496103_0012177
318 Ga0496103_0023492
319 Ga0496106_0014929
320 Ga0496107_0104723
321 Ga0496108_0512647
322 Ga0496111_0046173
323 Ga0496114_0116350
324 Ga0496114_0168578
325 Ga0496115_0002510
326 Ga0496115_0240433
327 Ga0496124_0079588
328 Ga0501031_0062431
329 Ga0501031_0139570
330 Ga0501036_0232675
331 Ga0501039_0087480
332 Ga0501039_0215695
333 Ga0501040_0095248
334 Ga0501040_0272714
335 Ga0501042_0087902
336 Ga0501046_0241287
337 Ga0501048_0083694
338 Ga0501048_0107804
339 Ga0501048_0114271
340 Ga0501067_0000474
341 Ga0501067_0008079
342 Ga0501067_0029691
343 Ga0501067_0062020
344 Ga0501068_0083114
345 Ga0501069_0004333
346 Ga0501069_0005771
347 Ga0501076_0159034
348 nmdc:mga03n38_142071_c1
349 nmdc:mga0yw44_146904_c1
350 nmdc:mga0yw44_265589_c1
351 nmdc:mga0yw44_31574_c1
352 nmdc:mga0yw44_76371_c1
353 nmdc:mga06z11_15428_c1
354 nmdc:mga05p37_178947_c1
355 nmdc:mga0qj67_8086_c1
356 nmdc:mga08y16_130909_c1
357 Ga0501084_0207379
358 Ga0466962_0010923
359 Ga0466962_0029109
360 Ga0530510_0031157
361 2643825077
362 2644100884
363 2644117293
364 2644534617
365 2676476323
366 2738869113
367 2740168743
368 2827634154
369 2855390413
370 2984577925
371 2990260105
372 8054611661

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00107

ADH_zinc_N

Zinc-binding dehydrogenase

151

278

0.91

PF08240

ADH_N

Alcohol dehydrogenase GroES-like domain

26

110

0.91

PF13602

ADH_zinc_N_2

Zinc-binding dehydrogenase

183

323

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
2j8z-assembly1.cif.gz_A-2 crystal structure of human p53 inducible oxidoreductase (tp53i3,pig3) 0.9842 1 324
4dup-assembly1.cif.gz_A crystal structure of a quinone oxidoreductase from rhizobium etli cfn 42 0.9821 1 325
4dup-assembly1.cif.gz_A crystal structure of a quinone oxidoreductase from rhizobium etli cfn 42 0.9791 1 325
2j8z-assembly1.cif.gz_A-2 crystal structure of human p53 inducible oxidoreductase (tp53i3,pig3) 0.9782 1 324
4dup-assembly1.cif.gz_B crystal structure of a quinone oxidoreductase from rhizobium etli cfn 42 0.9648 1 325
ID Description Score Start End Superfamily
af_C6TID4_1_124_3.90.180.10 Alpha Beta;Alpha-Beta Complex;Quinone Oxidoreductase; Chain A, domain 1;Medium-chain alcohol dehydrogenases, catalytic domain 0.9938 1 123 3.90.180.10
af_O65423_126_262_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9935 127 262 3.40.50.720
af_A0A1D6HNQ2_3_340_3.90.180.10 Alpha Beta;Alpha-Beta Complex;Quinone Oxidoreductase; Chain A, domain 1;Medium-chain alcohol dehydrogenases, catalytic domain 0.99 1 325 3.90.180.10
af_P72043_133_294_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.988 133 289 3.40.50.720
af_A0A1D6HNQ2_3_340_3.90.180.10 Alpha Beta;Alpha-Beta Complex;Quinone Oxidoreductase; Chain A, domain 1;Medium-chain alcohol dehydrogenases, catalytic domain 0.987 1 325 3.90.180.10
ID Description Score Start End GO Terms
AF-A0A445BBA4-F1-model_v4 Enoyl reductase (ER) domain-containing protein 0.9933 1 325 GO:0008270
GO:0016651
GO:0070402
AF-A0A354UX27-F1-model_v4 NAD(P)H-quinone oxidoreductase 0.9913 1 95 GO:0016651
GO:0070402
AF-A0A445BBA4-F1-model_v4 Enoyl reductase (ER) domain-containing protein 0.9903 1 325 GO:0008270
GO:0016651
GO:0070402
AF-B9JTA9-F1-model_v4 Quinone oxidoreductase 0.989 1 325 GO:0016651
GO:0070402
AF-A0A2E6BLH0-F1-model_v4 NAD(P)H-quinone oxidoreductase 0.9888 1 324 GO:0016651
GO:0070402

Map