F285149

General Info

Members Datasets Scaffolds Average Seq Length
185 119 172 290

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2643221632|2644182428
Length 319
Sequence NEREARSNGEAMDAVTESSSTDTLTRFRLDIAYDGGGFNGWAVQPQQRTVQGEIENALGMVFRRDPPTPRLVVAGRTDAGVHAAGQVAHLDLTPAQLKTLRRRRSVPAEEREDGAMLARRINGIQGAHPDLVVTKAALAPAGFDARFSALWRRYQYRVADSVSRRDPLQRHRTTWHPAHLDVDAMDAAAVSLVGLHDFASYCKPREGATTIRTLQEFRWSRDEHGVLIARLQADAFCHSMVRALVGACVAVGEGKLAVGDVVLLRDLGDKTADAFKVMQARGLTLMEVGYPDAAELAVRAQQTRARRSADAEPALRLTP

Samples

Sample ID Description Type Environment
1 2643221553 Microbacterium sp. Root553 Isolate Unclassified
2 2643221632 Leifsonia sp. Root112D2 Isolate Unclassified
3 2643221635 Yonghaparkia sp. Root332 Isolate Unclassified
4 2643221724 Microbacterium sp. Root280D1 Isolate Unclassified
5 2751185788 Curtobacterium pusillum AA3 Isolate Unclassified
6 2844841374 Leifsonia soli DSM 23871 Isolate Rhizosphere
7 2884763398 Leifsonia sp. PS1209 Isolate Stem Tuber
8 2919042368 Curtobacterium sp. 320 Isolate Rhizosphere
9 2919055335 Leifsonia sp. 1010 Isolate Rhizosphere
10 2919523602 Leifsonia shinshuensis 3821 Isolate Unclassified
11 2928104781 Curtobacterium sp. 1544 Isolate Rhizosphere
12 2928153084 Leifsonia sp. 563 Isolate Unclassified
13 2984551494 Curtobacterium sp. SORGH_AS776 Isolate Aerial Root
14 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
15 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
16 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
17 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
18 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
19 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
20 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
21 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
22 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
23 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
24 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
25 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
26 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
27 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
28 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
29 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
30 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
31 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
32 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
33 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
34 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
35 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
36 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
37 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
38 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
39 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
40 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
41 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
42 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
43 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
44 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
45 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
46 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
47 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
48 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
49 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
50 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
57 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
58 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
59 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
60 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
61 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
62 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
63 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
64 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
65 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
66 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
67 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
68 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
69 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
70 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
71 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
72 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
73 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
74 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
75 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
76 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
77 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
78 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
79 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
80 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
81 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
82 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
83 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
84 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
85 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
86 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
87 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
88 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
89 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
90 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
91 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
92 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
93 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
94 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
95 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
96 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
97 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
98 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
99 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
100 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
101 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
102 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
103 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
104 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
105 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
106 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
107 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
108 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
109 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
110 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
111 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
112 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
113 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
114 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
115 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
116 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
117 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
118 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
119 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 91.35
Metatranscriptomes 1.62
Isolates 7.03

Biome Distribution

Category Percentage (%)
Aerial Root 0.54
Bulb 0
Endosphere 16.22
Nodule 0
Rhizoplane 6.49
Rhizosphere 55.68
Stem 0
Stem Tuber 0.54
Unclassified 20.54

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10002201 3300001979 Bacteria 8914
2 JGI24735J21928_10002028 3300002067 Bacteria 7132
3 JGI25164J39214_1000679 3300002772 Bacteria 13579
4 JGI25165J46597_1000061 3300003214 Bacteria 208362
5 Ga0006562J51391_1009826 3300003578 Bacteria 13327
6 Ga0006562J51391_1009829 3300003578 Bacteria 8400
7 Ga0055539_1000005 3300003752 Bacteria 609598
8 Ga0055533_1000001 3300003756 Bacteria 1863437
9 Ga0055525_1001001 3300003759 Bacteria 7536
10 Ga0055527_1000017 3300003760 Bacteria 242362
11 Ga0055542_1000044 3300003762 Bacteria 206982
12 Ga0055529_1000279 3300003763 Bacteria 60946
13 Ga0055541_1002453 3300003841 Bacteria 3704
14 Ga0070667_100002229 3300005367 Bacteria 17056
15 Ga0070667_100108413 3300005367 Bacteria 2406
16 Ga0070714_100066820 3300005435 Bacteria 3099
17 Ga0068856_100042794 3300005614 Bacteria 4457
18 Ga0068852_100039176 3300005616 Bacteria 3989
19 Ga0068859_100017732 3300005617 Bacteria 7158
20 Ga0097620_100017732 3300006931 Bacteria 7158
21 Ga0105240_10040781 3300009093 Bacteria 5932
22 Ga0105241_10048747 3300009174 Bacteria 3224
23 Ga0105239_10160068 3300010375 Bacteria 2515
24 Ga0157369_10071408 3300013105 Bacteria 3727
25 Ga0157369_10079113 3300013105 Bacteria 3521
26 Ga0157369_10252609 3300013105 Bacteria 1840
27 Ga0157369_10265750 3300013105 Bacteria 1789
28 Ga0157372_10180071 3300013307 Bacteria 2446
29 Ga0157372_10553849 3300013307 Bacteria 1341
30 Ga0206353_11557860 3300020082 Bacteria 1830
31 Ga0209566_100066 3300025225 Bacteria 186951
32 Ga0209674_100001 3300025226 Bacteria 4013750
33 Ga0209674_109722 3300025226 Bacteria 1060
34 Ga0209672_100039 3300025228 Bacteria 283064
35 Ga0209147_101001 3300025229 Bacteria 12243
36 Ga0209563_100001 3300025230 Bacteria 4013775
37 Ga0209563_101275 3300025230 Bacteria 6884
38 Ga0207427_100042 3300025231 Bacteria 254170
39 Ga0209437_100538 3300025233 Bacteria 26230
40 Ga0209646_1000088 3300025246 Bacteria 192345
41 Ga0209677_100001 3300025253 Bacteria 4013787
42 Ga0209677_102161 3300025253 Bacteria 7674
43 Ga0209148_1000004 3300025254 Bacteria 1844481
44 Ga0209233_1000001 3300025261 Bacteria 2992747
45 Ga0209455_1000117 3300025272 Bacteria 176940
46 Ga0209455_1002598 3300025272 Bacteria 6871
47 Ga0207654_10067567 3300025911 Bacteria 2112
48 Ga0207695_10010059 3300025913 Bacteria 11616
49 Ga0207687_10017331 3300025927 Bacteria 4740
50 Ga0207658_10013327 3300025986 Bacteria 5615
51 Ga0207658_10090617 3300025986 Bacteria 2370
52 Ga0207702_10062697 3300026078 Bacteria 3176
53 Ga0207698_10040268 3300026142 Bacteria 3470
54 Ga0307406_10002332 3300031901 Bacteria 10314
55 Ga0307414_10405291 3300032004 Bacteria 1185
56 Ga0373927_0057278 3300035695 Bacteria 2520
57 Ga0395899_0004990 3300037312 Bacteria 10325
58 Ga0395898_0000381 3300037466 Bacteria 97274
59 Ga0395898_0056717 3300037466 Bacteria 3818
60 Ga0395901_0014665 3300038443 Bacteria 7964
61 Ga0395901_0092334 3300038443 Bacteria 3169
62 Ga0451793_1605551 3300041452 Bacteria 1778
63 Ga0451853_3313103 3300041512 Bacteria 1720
64 Ga0466972_0034657 3300044658 Bacteria 2472
65 Ga0466972_0070768 3300044658 Bacteria 1664
66 Ga0466965_0074435 3300044683 Bacteria 1711
67 Ga0466965_0121827 3300044683 Bacteria 1347
68 Ga0466961_0023400 3300044693 Bacteria 3974
69 Ga0466961_0023760 3300044693 Bacteria 3945
70 Ga0466961_0293686 3300044693 Bacteria 993
71 Ga0466971_0020684 3300044719 Bacteria 2926
72 Ga0466970_0000027 3300044765 Bacteria 56103
73 Ga0466970_0028156 3300044765 Bacteria 2951
74 Ga0466970_0062539 3300044765 Bacteria 1995
75 Ga0466970_0150295 3300044765 Bacteria 1285
76 Ga0466957_0170750 3300044842 Bacteria 1416
77 Ga0466960_0274150 3300044901 Bacteria 943
78 Ga0466959_0024916 3300045049 Bacteria 4431
79 Ga0495627_001168 3300046453 Bacteria 16769
80 Ga0495686_0108147 3300047472 Bacteria 1671
81 Ga0495626_0022434 3300048091 Bacteria 3118
82 Ga0496101_0063061 3300048904 Bacteria 2696
83 Ga0496102_0047674 3300048905 Bacteria 3895
84 Ga0496104_0240720 3300048907 Bacteria 1722
85 Ga0496105_0157105 3300048908 Bacteria 1867
86 Ga0496107_0174354 3300048910 Bacteria 1596
87 Ga0496108_0245729 3300048911 Bacteria 1557
88 Ga0496112_0213400 3300048915 Bacteria 1887
89 Ga0496113_0161975 3300048916 Bacteria 1769
90 Ga0496114_0047888 3300048917 Bacteria 3555
91 Ga0496114_0558204 3300048917 Bacteria 1011
92 Ga0496115_0082419 3300048918 Bacteria 2621
93 Ga0496117_0003265 3300048920 Bacteria 19059
94 Ga0496117_0012518 3300048920 Bacteria 7468
95 Ga0496117_0014520 3300048920 Bacteria 6779
96 Ga0496117_0049801 3300048920 Bacteria 2975
97 Ga0496117_0111306 3300048920 Bacteria 1705
98 Ga0496118_0005764 3300048921 Bacteria 13915
99 Ga0496118_0120000 3300048921 Bacteria 1717
100 Ga0496119_0004896 3300048922 Bacteria 13098
101 Ga0496119_0008499 3300048922 Bacteria 9007
102 Ga0496119_0162787 3300048922 Bacteria 1184
103 Ga0496120_0011369 3300048923 Bacteria 6124
104 Ga0496120_0058814 3300048923 Bacteria 2157
105 Ga0496121_0000025 3300048924 Bacteria 453467
106 Ga0496122_0000799 3300048925 Bacteria 60347
107 Ga0496122_0040465 3300048925 Bacteria 3703
108 Ga0496122_0072842 3300048925 Bacteria 2440
109 Ga0496122_0112085 3300048925 Bacteria 1787
110 Ga0496123_0000009 3300048926 Bacteria 509486
111 Ga0496124_0000135 3300048927 Bacteria 152458
112 Ga0496124_0002798 3300048927 Bacteria 22099
113 Ga0496124_0121877 3300048927 Bacteria 2082
114 Ga0496124_0165126 3300048927 Bacteria 1721
115 Ga0496125_0072729 3300048928 Bacteria 2677
116 Ga0496125_0079321 3300048928 Bacteria 2519
117 Ga0496125_0143632 3300048928 Bacteria 1654
118 Ga0496126_0066762 3300048929 Bacteria 3215
119 Ga0496126_0148803 3300048929 Bacteria 2008
120 Ga0501031_0017383 3300049568 Bacteria 4672
121 Ga0501031_0063855 3300049568 Bacteria 2398
122 Ga0501032_0070142 3300049569 Bacteria 2337
123 Ga0501032_0081104 3300049569 Bacteria 2159
124 Ga0501033_0005826 3300049570 Bacteria 9691
125 Ga0501033_0015040 3300049570 Bacteria 5873
126 Ga0501033_0086385 3300049570 Bacteria 2296
127 Ga0501033_0324503 3300049570 Bacteria 1081
128 Ga0501034_0050668 3300049571 Bacteria 4187
129 Ga0501034_0151078 3300049571 Bacteria 2298
130 Ga0501034_0153659 3300049571 Bacteria 2276
131 Ga0501034_0157732 3300049571 Bacteria 2242
132 Ga0501034_0264460 3300049571 Bacteria 1662
133 Ga0501034_0382034 3300049571 Bacteria 1333
134 Ga0501034_0550851 3300049571 Bacteria 1063
135 Ga0501034_0711144 3300049571 Bacteria 902
136 Ga0501036_0057703 3300049572 Bacteria 3288
137 Ga0501037_0209876 3300049573 Bacteria 1374
138 Ga0501038_0029858 3300049574 Bacteria 4829
139 Ga0501038_0061486 3300049574 Bacteria 3211
140 Ga0501038_0422411 3300049574 Bacteria 1028
141 Ga0501039_0090681 3300049575 Bacteria 2382
142 Ga0501042_0183290 3300049578 Bacteria 1510
143 Ga0501043_0045735 3300049579 Bacteria 3442
144 Ga0501043_0051375 3300049579 Bacteria 3239
145 Ga0501043_0120594 3300049579 Bacteria 2056
146 Ga0501043_0273181 3300049579 Bacteria 1297
147 Ga0501046_0126332 3300049580 Bacteria 1942
148 Ga0501047_0001782 3300049581 Bacteria 20821
149 Ga0501047_0003840 3300049581 Bacteria 14126
150 Ga0501048_0000389 3300049582 Bacteria 30494
151 Ga0501048_0022750 3300049582 Bacteria 4582
152 Ga0501068_0272472 3300049584 Bacteria 1081
153 Ga0501070_0002297 3300049586 Bacteria 16784
154 Ga0501070_0136600 3300049586 Bacteria 2024
155 Ga0501070_0240278 3300049586 Bacteria 1483
156 Ga0501073_0155388 3300049589 Bacteria 1585
157 Ga0501080_0121764 3300049742 Bacteria 2417
158 Ga0501083_0094810 3300049744 Bacteria 1970
159 Ga0501035_0001567 3300049822 Bacteria 23257
160 Ga0501035_0045557 3300049822 Bacteria 3946
161 Ga0501035_0055648 3300049822 Bacteria 3531
162 Ga0501035_0164044 3300049822 Bacteria 1922
163 Ga0501044_0003686 3300049823 Bacteria 17221
164 Ga0501044_0078997 3300049823 Bacteria 3334
165 Ga0501044_0154284 3300049823 Bacteria 2276
166 Ga0501045_0032936 3300049824 Bacteria 3756
167 nmdc:mga00v17_73271_c1 3300050491 Bacteria 2126
168 Ga0500568_0000117 3300053139 Bacteria 71510
169 Ga0500573_0001962 3300053140 Bacteria 10057
170 Ga0500573_0014309 3300053140 Bacteria 4486
171 Ga0500616_0000117 3300053153 Bacteria 145655
172 Ga0500616_0001615 3300053153 Bacteria 20973

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300044901 Ga0466960_0274150 Ga0466960_0274150_15_722 234
2 3300048921 Ga0496118_0120000 Ga0496118_0120000_26_793 255
3 3300005617 Ga0068859_100017732 Ga0068859_1000177326 258
4 3300006931 Ga0097620_100017732 Ga0097620_1000177323 258
5 3300048907 Ga0496104_0240720 Ga0496104_0240720_650_1447 259
6 3300048911 Ga0496108_0245729 Ga0496108_0245729_452_1249 259
7 3300048917 Ga0496114_0558204 Ga0496114_0558204_36_836 260
8 3300048918 Ga0496115_0082419 Ga0496115_0082419_1672_2472 260
9 3300053140 Ga0500573_0014309 Ga0500573_0014309_2887_3819 261
10 3300049568 Ga0501031_0063855 Ga0501031_0063855_1496_2293 262
11 3300049570 Ga0501033_0324503 Ga0501033_0324503_82_879 262
12 3300049571 Ga0501034_0550851 Ga0501034_0550851_223_1020 262
13 3300049574 Ga0501038_0029858 Ga0501038_0029858_352_1149 262
14 3300049581 Ga0501047_0003840 Ga0501047_0003840_1763_2560 262
15 3300049582 Ga0501048_0000389 Ga0501048_0000389_295_1092 262
16 3300049822 Ga0501035_0164044 Ga0501035_0164044_104_901 262
17 3300005614 Ga0068856_100042794 Ga0068856_1000427944 264
18 3300009174 Ga0105241_10048747 Ga0105241_100487474 264
19 3300025911 Ga0207654_10067567 Ga0207654_100675672 264
20 3300026078 Ga0207702_10062697 Ga0207702_100626972 264
21 3300048915 Ga0496112_0213400 Ga0496112_0213400_588_1394 264
22 3300005616 Ga0068852_100039176 Ga0068852_1000391763 265
23 3300026142 Ga0207698_10040268 Ga0207698_100402683 265
24 3300025927 Ga0207687_10017331 Ga0207687_100173314 266
25 3300044693 Ga0466961_0023400 Ga0466961_0023400_1077_1898 266
26 3300049579 Ga0501043_0120594 Ga0501043_0120594_268_1125 266
27 3300013105 Ga0157369_10079113 Ga0157369_100791133 267
28 3300049571 Ga0501034_0711144 Ga0501034_0711144_59_892 267
29 3300035695 Ga0373927_0057278 Ga0373927_0057278_1444_2301 268
30 3300049571 Ga0501034_0151078 Ga0501034_0151078_1303_2151 269
31 3300049571 Ga0501034_0157732 Ga0501034_0157732_314_1162 269
32 3300005367 Ga0070667_100002229 Ga0070667_10000222922 270
33 3300025986 Ga0207658_10013327 Ga0207658_100133272 270
34 3300048927 Ga0496124_0000135 Ga0496124_0000135_22004_22852 274
35 3300048925 Ga0496122_0040465 Ga0496122_0040465_1256_2110 276
36 3300053139 Ga0500568_0000117 Ga0500568_0000117_49526_50404 277
37 iso_pu_bacteria 2643221553 2643783569 277
38 iso_pu_bacteria 2643221724 2644679188 277
39 3300049584 Ga0501068_0272472 Ga0501068_0272472_58_963 278
40 iso_pu_bacteria 2751185788 2753303663 278
41 iso_pu_bacteria 2928104781 2928105505 278
42 3300048091 Ga0495626_0022434 Ga0495626_0022434_284_1138 279
43 3300048925 Ga0496122_0072842 Ga0496122_0072842_1444_2298 279
44 iso_pu_bacteria 2919042368 2919043207 279
45 3300048920 Ga0496117_0049801 Ga0496117_0049801_918_1760 280
46 3300048920 Ga0496117_0111306 Ga0496117_0111306_41_883 280
47 3300048925 Ga0496122_0112085 Ga0496122_0112085_870_1712 280
48 3300048928 Ga0496125_0072729 Ga0496125_0072729_815_1657 280
49 3300048928 Ga0496125_0079321 Ga0496125_0079321_1317_2159 280
50 3300048929 Ga0496126_0066762 Ga0496126_0066762_1004_1846 280
51 3300050491 nmdc:mga00v17_73271_c1 nmdc:mga00v17_73271_c1_364_1206 280
52 3300025246 Ga0209646_1000088 Ga0209646_100008830 281
53 3300031901 Ga0307406_10002332 Ga0307406_1000233211 281
54 3300032004 Ga0307414_10405291 Ga0307414_104052911 281
55 3300041512 Ga0451853_3313103 Ga0451853_3313103_855_1703 281
56 3300046453 Ga0495627_001168 Ga0495627_001168_3457_4305 281
57 3300048922 Ga0496119_0162787 Ga0496119_0162787_49_972 281
58 3300048923 Ga0496120_0058814 Ga0496120_0058814_216_1139 281
59 3300048927 Ga0496124_0165126 Ga0496124_0165126_46_921 281
60 3300049571 Ga0501034_0264460 Ga0501034_0264460_63_911 281
61 3300053153 Ga0500616_0001615 Ga0500616_0001615_9226_10137 281
62 3300002067 JGI24735J21928_10002028 JGI24735J21928_100020284 282
63 3300002772 JGI25164J39214_1000679 JGI25164J39214_10006796 282
64 3300003214 JGI25165J46597_1000061 JGI25165J46597_100006160 282
65 3300003578 Ga0006562J51391_1009826 Ga0006562J51391_10098269 282
66 3300003578 Ga0006562J51391_1009829 Ga0006562J51391_10098295 282
67 3300003752 Ga0055539_1000005 Ga0055539_1000005593 282
68 3300003756 Ga0055533_1000001 Ga0055533_10000011662 282
69 3300003759 Ga0055525_1001001 Ga0055525_10010016 282
70 3300003760 Ga0055527_1000017 Ga0055527_100001770 282
71 3300003762 Ga0055542_1000044 Ga0055542_100004470 282
72 3300003763 Ga0055529_1000279 Ga0055529_100027925 282
73 3300003841 Ga0055541_1002453 Ga0055541_10024531 282
74 3300005435 Ga0070714_100066820 Ga0070714_1000668201 282
75 3300013105 Ga0157369_10071408 Ga0157369_100714082 282
76 3300013105 Ga0157369_10252609 Ga0157369_102526093 282
77 3300013105 Ga0157369_10265750 Ga0157369_102657501 282
78 3300013307 Ga0157372_10553849 Ga0157372_105538492 282
79 3300020082 Ga0206353_11557860 Ga0206353_115578601 282
80 3300025225 Ga0209566_100066 Ga0209566_100066167 282
81 3300025226 Ga0209674_100001 Ga0209674_1000011663 282
82 3300025226 Ga0209674_109722 Ga0209674_1097221 282
83 3300025228 Ga0209672_100039 Ga0209672_10003971 282
84 3300025229 Ga0209147_101001 Ga0209147_1010015 282
85 3300025230 Ga0209563_100001 Ga0209563_1000011663 282
86 3300025230 Ga0209563_101275 Ga0209563_1012755 282
87 3300025231 Ga0207427_100042 Ga0207427_10004254 282
88 3300025233 Ga0209437_100538 Ga0209437_10053818 282
89 3300025253 Ga0209677_100001 Ga0209677_1000011663 282
90 3300025253 Ga0209677_102161 Ga0209677_10216111 282
91 3300025254 Ga0209148_1000004 Ga0209148_100000471 282
92 3300025261 Ga0209233_1000001 Ga0209233_10000011140 282
93 3300025272 Ga0209455_1000117 Ga0209455_1000117162 282
94 3300025272 Ga0209455_1002598 Ga0209455_10025984 282
95 3300037312 Ga0395899_0004990 Ga0395899_0004990_5942_6811 282
96 3300037466 Ga0395898_0000381 Ga0395898_0000381_84924_85790 282
97 3300037466 Ga0395898_0056717 Ga0395898_0056717_1487_2356 282
98 3300038443 Ga0395901_0014665 Ga0395901_0014665_6213_7133 282
99 3300038443 Ga0395901_0092334 Ga0395901_0092334_1154_2023 282
100 3300044658 Ga0466972_0034657 Ga0466972_0034657_1434_2300 282
101 3300044658 Ga0466972_0070768 Ga0466972_0070768_307_1173 282
102 3300044683 Ga0466965_0074435 Ga0466965_0074435_254_1123 282
103 3300044683 Ga0466965_0121827 Ga0466965_0121827_38_907 282
104 3300044693 Ga0466961_0023760 Ga0466961_0023760_1161_2027 282
105 3300044693 Ga0466961_0293686 Ga0466961_0293686_79_957 282
106 3300044719 Ga0466971_0020684 Ga0466971_0020684_503_1372 282
107 3300044765 Ga0466970_0028156 Ga0466970_0028156_504_1370 282
108 3300044765 Ga0466970_0062539 Ga0466970_0062539_778_1647 282
109 3300044765 Ga0466970_0150295 Ga0466970_0150295_166_1035 282
110 3300044842 Ga0466957_0170750 Ga0466957_0170750_104_973 282
111 3300045049 Ga0466959_0024916 Ga0466959_0024916_1885_2751 282
112 3300048904 Ga0496101_0063061 Ga0496101_0063061_1248_2114 282
113 3300048905 Ga0496102_0047674 Ga0496102_0047674_2025_2891 282
114 3300048908 Ga0496105_0157105 Ga0496105_0157105_893_1759 282
115 3300048910 Ga0496107_0174354 Ga0496107_0174354_217_1083 282
116 3300048916 Ga0496113_0161975 Ga0496113_0161975_88_957 282
117 3300048917 Ga0496114_0047888 Ga0496114_0047888_208_1074 282
118 3300048920 Ga0496117_0012518 Ga0496117_0012518_3858_4727 282
119 3300048920 Ga0496117_0014520 Ga0496117_0014520_405_1271 282
120 3300048921 Ga0496118_0005764 Ga0496118_0005764_9296_10162 282
121 3300048927 Ga0496124_0121877 Ga0496124_0121877_962_1879 282
122 3300049568 Ga0501031_0017383 Ga0501031_0017383_287_1204 282
123 3300049569 Ga0501032_0070142 Ga0501032_0070142_1155_2072 282
124 3300049570 Ga0501033_0005826 Ga0501033_0005826_8164_9081 282
125 3300049570 Ga0501033_0015040 Ga0501033_0015040_3994_4878 282
126 3300049570 Ga0501033_0086385 Ga0501033_0086385_860_1777 282
127 3300049571 Ga0501034_0050668 Ga0501034_0050668_1864_2766 282
128 3300049571 Ga0501034_0153659 Ga0501034_0153659_687_1604 282
129 3300049571 Ga0501034_0382034 Ga0501034_0382034_356_1273 282
130 3300049572 Ga0501036_0057703 Ga0501036_0057703_216_1133 282
131 3300049573 Ga0501037_0209876 Ga0501037_0209876_286_1188 282
132 3300049574 Ga0501038_0061486 Ga0501038_0061486_611_1528 282
133 3300049575 Ga0501039_0090681 Ga0501039_0090681_874_1791 282
134 3300049578 Ga0501042_0183290 Ga0501042_0183290_89_1006 282
135 3300049579 Ga0501043_0051375 Ga0501043_0051375_1000_1902 282
136 3300049579 Ga0501043_0273181 Ga0501043_0273181_379_1263 282
137 3300049580 Ga0501046_0126332 Ga0501046_0126332_611_1528 282
138 3300049582 Ga0501048_0022750 Ga0501048_0022750_1874_2791 282
139 3300049586 Ga0501070_0002297 Ga0501070_0002297_15458_16324 282
140 3300049586 Ga0501070_0136600 Ga0501070_0136600_842_1759 282
141 3300049586 Ga0501070_0240278 Ga0501070_0240278_208_1110 282
142 3300049589 Ga0501073_0155388 Ga0501073_0155388_25_942 282
143 3300049742 Ga0501080_0121764 Ga0501080_0121764_602_1519 282
144 3300049744 Ga0501083_0094810 Ga0501083_0094810_691_1575 282
145 3300049822 Ga0501035_0045557 Ga0501035_0045557_2396_3298 282
146 3300049822 Ga0501035_0055648 Ga0501035_0055648_713_1579 282
147 3300049823 Ga0501044_0078997 Ga0501044_0078997_1341_2258 282
148 3300049823 Ga0501044_0154284 Ga0501044_0154284_673_1590 282
149 3300049824 Ga0501045_0032936 Ga0501045_0032936_1002_1919 282
150 iso_pu_bacteria 2844841374 2844843346 282
151 iso_pu_bacteria 2884763398 2884766372 282
152 iso_pu_bacteria 2919055335 2919058825 282
153 iso_pu_bacteria 2919523602 2919525400 282
154 iso_pu_bacteria 2928153084 2928153483 282
155 iso_pu_bacteria 2984551494 2984551961 282
156 3300005367 Ga0070667_100108413 Ga0070667_1001084133 284
157 3300009093 Ga0105240_10040781 Ga0105240_100407815 284
158 3300010375 Ga0105239_10160068 Ga0105239_101600682 284
159 3300013307 Ga0157372_10180071 Ga0157372_101800711 284
160 3300025913 Ga0207695_10010059 Ga0207695_100100593 284
161 3300025986 Ga0207658_10090617 Ga0207658_100906172 284
162 3300041452 Ga0451793_1605551 Ga0451793_1605551_94_990 284
163 3300047472 Ga0495686_0108147 Ga0495686_0108147_368_1264 284
164 3300048920 Ga0496117_0003265 Ga0496117_0003265_15103_15960 284
165 3300048922 Ga0496119_0004896 Ga0496119_0004896_669_1547 284
166 3300048922 Ga0496119_0008499 Ga0496119_0008499_3061_3918 284
167 3300048923 Ga0496120_0011369 Ga0496120_0011369_1973_2830 284
168 3300048924 Ga0496121_0000025 Ga0496121_0000025_447075_447983 284
169 3300048925 Ga0496122_0000799 Ga0496122_0000799_4614_5471 284
170 3300048926 Ga0496123_0000009 Ga0496123_0000009_399194_400051 284
171 3300048927 Ga0496124_0002798 Ga0496124_0002798_11441_12298 284
172 3300048928 Ga0496125_0143632 Ga0496125_0143632_442_1299 284
173 3300048929 Ga0496126_0148803 Ga0496126_0148803_558_1415 284
174 3300049569 Ga0501032_0081104 Ga0501032_0081104_417_1325 284
175 3300049574 Ga0501038_0422411 Ga0501038_0422411_109_1017 284
176 3300049579 Ga0501043_0045735 Ga0501043_0045735_2272_3180 284
177 3300049581 Ga0501047_0001782 Ga0501047_0001782_18795_19703 284
178 3300049822 Ga0501035_0001567 Ga0501035_0001567_21949_22857 284
179 3300049823 Ga0501044_0003686 Ga0501044_0003686_15040_15948 284
180 3300053140 Ga0500573_0001962 Ga0500573_0001962_8908_9843 284
181 3300053153 Ga0500616_0000117 Ga0500616_0000117_73818_74720 284
182 iso_pu_bacteria 2643221632 2644182428 284
183 iso_pu_bacteria 2643221635 2644197874 287
184 3300044765 Ga0466970_0000027 Ga0466970_0000027_27508_28389 292
185 3300001979 JGI24740J21852_10002201 JGI24740J21852_100022015 308

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01416

PseudoU_synth_1

tRNA pseudouridine synthase

188

291

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
2nr0-assembly1.cif.gz_B crystal structure of pseudoudirinde synthase trua in complex with leucyl trna 0.9296 2 288
2nre-assembly1.cif.gz_A-2 crystal structure of pseudoudirinde synthase trua in complex with leucyl trna 0.9233 2 288
1vs3-assembly1.cif.gz_B crystal structure of the trna pseudouridine synthase trua from thermus thermophilus hb8 0.9015 2 289
1vs3-assembly1.cif.gz_B crystal structure of the trna pseudouridine synthase trua from thermus thermophilus hb8 0.8877 2 289
2nr0-assembly1.cif.gz_B crystal structure of pseudoudirinde synthase trua in complex with leucyl trna 0.8551 2 288
ID Description Score Start End Superfamily
af_P9WHP9_140_277_3.30.70.660 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Pseudouridine synthase I, catalytic domain, C-terminal subdomain 0.9457 148 286 3.30.70.660
af_P9WHP9_140_277_3.30.70.660 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Pseudouridine synthase I, catalytic domain, C-terminal subdomain 0.9392 148 286 3.30.70.660
af_Q2FW37_106_241_3.30.70.660 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Pseudouridine synthase I, catalytic domain, C-terminal subdomain 0.9228 150 284 3.30.70.660
2nreA02 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Pseudouridine synthase I, catalytic domain, C-terminal subdomain 0.913 149 286 3.30.70.660
af_A0A1D6HBJ9_162_299_3.30.70.660 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Pseudouridine synthase I, catalytic domain, C-terminal subdomain 0.9128 149 280 3.30.70.660
ID Description Score Start End GO Terms
AF-A0A3D5CJ38-F1-model_v4 tRNA pseudouridine synthase (EC 5.4.99.12) 0.9693 1 266 GO:0003723
GO:0031119
GO:0160147
AF-A0A3D5CJ38-F1-model_v4 tRNA pseudouridine synthase (EC 5.4.99.12) 0.9654 1 266 GO:0003723
GO:0031119
GO:0160147
AF-A0A399TPX0-F1-model_v4 deleted 0.9653 112 301
AF-A0A7Y5RLR5-F1-model_v4 tRNA pseudouridine synthase (EC 5.4.99.12) 0.9646 135 301 GO:0003723
GO:0009982
GO:0031119
GO:0140098
AF-A0A4Y8Y9S0-F1-model_v4 deleted 0.9505 137 252

Feature Viewer

pLDDT pTM Quality
89.38 0.85 High
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Predicted Structure (AlphaFold2)

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