F285135

General Info

Members Datasets Scaffolds Average Seq Length
185 127 370 253

Family's Representative Sequence

Representative Sequence 3300061734|Ga0530510_0156237|Ga0530510_0156237_239_1126
Length 295
Sequence MGRKSGAQSMRRGIGLPVEEGGPFRVAAMEGRPLVTEHTTARRAAARVQDLTKTYGTGQARVVALDEVTLDLYAGEFTAVMGPSGSGKSTLMHCCAALDSATSGSVFIGDTDLSGLKDKELTRLRRDQVGFVFQSFNLVPTLTAEENILLPLSIAGRKPDQDWYDSVIATVGLGDRLDHRPNALSGGQQQRVAVARALVSRPSIVFADEPTGNLDSRSGAEVLSLLRRSVDDFGQTIVMVTHDPVAAAYTDRVVFLADGKVVDELRHPDRETVLERMTHMDARQLEAIRTGAADA

Samples

Sample ID Description Type Environment
1 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
2 3300000549 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJQ_Illumina_Assembled Metagenome Rhizosphere
3 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
4 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
9 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
10 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
11 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
12 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
13 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
14 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
15 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
16 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
17 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
18 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
19 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
20 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
21 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
22 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
23 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
24 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
25 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
26 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
27 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
28 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
29 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
30 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
31 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
32 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
33 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
34 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
35 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
36 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
37 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
38 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
39 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
40 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
41 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
42 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
43 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
44 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
45 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
46 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
47 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
48 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
70 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
71 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
72 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
73 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
74 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
75 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
76 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
77 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
78 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
79 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
80 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
81 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
82 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
83 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
84 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
85 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
86 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
87 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
88 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
89 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
90 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
91 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
92 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
93 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
94 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
95 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
96 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
97 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
98 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
99 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
100 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
101 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
102 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
103 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
104 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
105 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
106 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
107 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
108 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
109 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
110 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
111 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
112 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
113 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
114 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
115 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
116 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
117 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
118 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
119 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
120 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
121 2626541554 Frankia sp. AvcI.1 Isolate Nodule
122 2643221561 Nocardioides sp. Root151 Isolate Unclassified
123 2643221615 Nocardioides sp. Root224 Isolate Unclassified
124 2643221657 Nocardioides sp. Root1257 Isolate Unclassified
125 2643221696 Nocardioides sp. Root140 Isolate Unclassified
126 2811994874 Nocardioides sp. SLBN-35 Isolate Unclassified
127 2855386786 Nocardioides ferulae EGI 63112 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 96.22
Metatranscriptomes 0
Isolates 3.78

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.49
Nodule 0.54
Rhizoplane 8.11
Rhizosphere 79.46
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0530510_0156237 3300061734 Bacteria 1686
2 LJQas_1001382 3300000549 Bacteria 3640
3 JGI25406J46586_10012714 3300003203 Bacteria 3638
4 JGI25407J50210_10046315 3300003373 Bacteria 1107
5 Ga0070683_100052508 3300005329 Bacteria 3777
6 Ga0070682_100040495 3300005337 Bacteria 2868
7 Ga0070682_100399578 3300005337 Bacteria 1039
8 Ga0068868_100133358 3300005338 Bacteria 2034
9 Ga0068868_100566444 3300005338 Bacteria 1003
10 Ga0070691_10030965 3300005341 Bacteria 2507
11 Ga0070692_10002077 3300005345 Bacteria 7631
12 Ga0070692_10015182 3300005345 Bacteria 3637
13 Ga0070692_10169916 3300005345 Bacteria 1256
14 Ga0070669_100080093 3300005353 Bacteria 2430
15 Ga0070673_100074275 3300005364 Bacteria 2740
16 Ga0070688_100321194 3300005365 Bacteria 1125
17 Ga0070659_100112858 3300005366 Bacteria 2195
18 Ga0070700_100010748 3300005441 Bacteria 5058
19 Ga0070700_100139251 3300005441 Bacteria 1647
20 Ga0070694_100433135 3300005444 Bacteria 1035
21 Ga0070708_100106855 3300005445 Bacteria 2569
22 Ga0070678_100264959 3300005456 Bacteria 1447
23 Ga0068867_100007292 3300005459 Bacteria 7824
24 Ga0070679_100587860 3300005530 Bacteria 1057
25 Ga0070686_100347988 3300005544 Bacteria 1113
26 Ga0068854_100012725 3300005578 Bacteria 5511
27 Ga0070702_100033598 3300005615 Bacteria 2821
28 Ga0070702_100147850 3300005615 Bacteria 1504
29 Ga0068852_100016376 3300005616 Bacteria 5778
30 Ga0068861_100286623 3300005719 Bacteria 1420
31 Ga0068851_10204641 3300005834 Bacteria 1103
32 Ga0068870_10009397 3300005840 Bacteria 4446
33 Ga0081455_10076002 3300005937 Bacteria 2769
34 Ga0081455_10133345 3300005937 Bacteria 1939
35 Ga0081538_10005756 3300005981 Bacteria 11065
36 Ga0081538_10045058 3300005981 Bacteria 2739
37 Ga0081540_1013146 3300005983 Bacteria 5402
38 Ga0081539_10000895 3300005985 Bacteria 56919
39 Ga0081539_10061127 3300005985 Bacteria 2065
40 Ga0075363_100016100 3300006048 Bacteria 3689
41 Ga0075364_10024460 3300006051 Bacteria 3836
42 Ga0075370_10024518 3300006353 Bacteria 3333
43 Ga0075370_10082872 3300006353 Bacteria 1845
44 Ga0075431_100018190 3300006847 Bacteria 7151
45 Ga0068865_100078431 3300006881 Bacteria 2363
46 Ga0111539_10478244 3300009094 Bacteria 1451
47 Ga0105245_10149780 3300009098 Bacteria 2205
48 Ga0105245_10159267 3300009098 Bacteria 2141
49 Ga0105245_10495597 3300009098 Bacteria 1237
50 Ga0105243_10008980 3300009148 Bacteria 7639
51 Ga0105243_10146100 3300009148 Bacteria 2023
52 Ga0105243_10211160 3300009148 Bacteria 1709
53 Ga0105243_10211711 3300009148 Bacteria 1707
54 Ga0105243_10703839 3300009148 Bacteria 985
55 Ga0105249_10033597 3300009553 Bacteria 4645
56 Ga0105249_10177786 3300009553 Bacteria 2068
57 Ga0105246_10028663 3300011119 Bacteria 3660
58 Ga0157372_10071910 3300013307 Bacteria 3897
59 Ga0157372_10296538 3300013307 Bacteria 1880
60 Ga0157375_10048133 3300013308 Bacteria 4168
61 Ga0157375_10425250 3300013308 Bacteria 1494
62 Ga0163163_10144522 3300014325 Bacteria 2422
63 Ga0157380_10060199 3300014326 Bacteria 3033
64 Ga0157377_10097820 3300014745 Bacteria 1743
65 Ga0157379_10260861 3300014968 Bacteria 1574
66 Ga0157379_10614132 3300014968 Bacteria 1016
67 Ga0163161_10013070 3300017792 Bacteria 5769
68 Ga0207710_10047325 3300025900 Bacteria 1922
69 Ga0207688_10033063 3300025901 Bacteria 2859
70 Ga0207662_10022783 3300025918 Bacteria 3595
71 Ga0207662_10071619 3300025918 Bacteria 2099
72 Ga0207652_10464170 3300025921 Bacteria 1141
73 Ga0207681_10676571 3300025923 Bacteria 857
74 Ga0207690_10072478 3300025932 Bacteria 2379
75 Ga0207709_10054567 3300025935 Bacteria 2465
76 Ga0207709_10191082 3300025935 Bacteria 1454
77 Ga0207669_10640076 3300025937 Bacteria 868
78 Ga0207704_10251293 3300025938 Bacteria 1327
79 Ga0207691_10028468 3300025940 Bacteria 5233
80 Ga0207661_10153972 3300025944 Bacteria 1989
81 Ga0207679_10568489 3300025945 Bacteria 1019
82 Ga0207668_10098062 3300025972 Bacteria 2171
83 Ga0207640_10077233 3300025981 Bacteria 2263
84 Ga0207640_10442311 3300025981 Bacteria 1069
85 Ga0207677_10097610 3300026023 Bacteria 2153
86 Ga0207703_10176997 3300026035 Bacteria 1880
87 Ga0207708_10021866 3300026075 Bacteria 4827
88 Ga0207708_10120648 3300026075 Bacteria 2042
89 Ga0207648_10004668 3300026089 Bacteria 14016
90 Ga0207648_10180380 3300026089 Bacteria 1869
91 Ga0207648_10697598 3300026089 Bacteria 940
92 Ga0207675_100006537 3300026118 Bacteria 11033
93 Ga0207675_100131393 3300026118 Bacteria 2374
94 Ga0207683_10256343 3300026121 Bacteria 1597
95 Ga0207683_10526249 3300026121 Bacteria 1093
96 Ga0207698_10134599 3300026142 Bacteria 2118
97 Ga0307405_10440492 3300031731 Bacteria 1030
98 Ga0307413_10092772 3300031824 Bacteria 1972
99 Ga0307410_10144641 3300031852 Bacteria 1763
100 Ga0307406_10148943 3300031901 Bacteria 1667
101 Ga0307406_10214908 3300031901 Bacteria 1425
102 Ga0307407_10023088 3300031903 Bacteria 3240
103 Ga0307407_10170483 3300031903 Bacteria 1433
104 Ga0307407_10257228 3300031903 Bacteria 1199
105 Ga0307412_10200631 3300031911 Bacteria 1514
106 Ga0307409_100048124 3300031995 Bacteria 3242
107 Ga0307409_100255951 3300031995 Bacteria 1603
108 Ga0307409_100431334 3300031995 Bacteria 1267
109 Ga0307416_100021445 3300032002 Bacteria 4638
110 Ga0307416_100062155 3300032002 Bacteria 3052
111 Ga0307416_100107846 3300032002 Bacteria 2445
112 Ga0307414_10047433 3300032004 Bacteria 2956
113 Ga0307414_10417124 3300032004 Bacteria 1170
114 Ga0307411_10265601 3300032005 Bacteria 1358
115 Ga0307411_10320333 3300032005 Bacteria 1252
116 Ga0307411_10593894 3300032005 Bacteria 951
117 Ga0307415_100022917 3300032126 Bacteria 3865
118 Ga0307415_100432929 3300032126 Bacteria 1132
119 Ga0316574_0078218 3300035398 Bacteria 2097
120 Ga0316574_0247131 3300035398 Bacteria 1140
121 Ga0395898_0827119 3300037466 Bacteria 866
122 Ga0395905_0169634 3300037471 Bacteria 2050
123 Ga0400483_128338 3300039062 Bacteria 3106
124 Ga0439433_0011818 3300041999 Bacteria 1914
125 Ga0439457_000737 3300042014 Bacteria 9733
126 Ga0466965_0073472 3300044683 Bacteria 1722
127 Ga0466965_0086380 3300044683 Bacteria 1591
128 Ga0466963_0047924 3300044694 Bacteria 2822
129 Ga0466963_0366484 3300044694 Bacteria 1015
130 Ga0466957_0066789 3300044842 Bacteria 2218
131 Ga0466960_0000697 3300044901 Bacteria 11723
132 Ga0466960_0034578 3300044901 Bacteria 2356
133 Ga0466960_0128420 3300044901 Bacteria 1335
134 Ga0466960_0146079 3300044901 Bacteria 1260
135 Ga0466960_0146631 3300044901 Bacteria 1257
136 Ga0466967_0016948 3300045976 Bacteria 5763
137 Ga0466967_0089323 3300045976 Bacteria 2798
138 Ga0466967_1072241 3300045976 Bacteria 802
139 Ga0495664_0021425 3300046477 Bacteria 3734
140 Ga0496101_0011331 3300048904 Bacteria 5913
141 Ga0496102_0000044 3300048905 Bacteria 187834
142 Ga0496102_0132505 3300048905 Bacteria 2334
143 Ga0496103_0000123 3300048906 Bacteria 83794
144 Ga0496103_0247633 3300048906 Bacteria 1147
145 Ga0496106_0020088 3300048909 Bacteria 4955
146 Ga0496108_0086641 3300048911 Bacteria 2659
147 Ga0496110_0046158 3300048913 Bacteria 3811
148 Ga0496110_0072049 3300048913 Bacteria 3065
149 Ga0496110_0125487 3300048913 Bacteria 2316
150 Ga0496111_0149664 3300048914 Bacteria 1731
151 Ga0496114_0040521 3300048917 Bacteria 3857
152 Ga0496114_0707347 3300048917 Bacteria 883
153 Ga0496115_0014927 3300048918 Bacteria 5890
154 Ga0496115_0145680 3300048918 Bacteria 1955
155 Ga0496117_0039228 3300048920 Bacteria 3498
156 Ga0496118_0007809 3300048921 Bacteria 11226
157 Ga0496119_0005652 3300048922 Bacteria 11869
158 Ga0501034_0024356 3300049571 Bacteria 6156
159 Ga0501039_0081478 3300049575 Bacteria 2520
160 Ga0501039_0140123 3300049575 Bacteria 1900
161 Ga0501068_0083324 3300049584 Bacteria 1965
162 Ga0501069_0041789 3300049585 Bacteria 2535
163 Ga0501070_0359326 3300049586 Bacteria 1181
164 Ga0501070_0429648 3300049586 Bacteria 1066
165 Ga0501075_0512533 3300049591 Bacteria 915
166 Ga0501075_0638192 3300049591 Bacteria 812
167 Ga0501080_0034410 3300049742 Bacteria 4730
168 Ga0501044_0779128 3300049823 Bacteria 837
169 Ga0501045_0274554 3300049824 Bacteria 1255
170 nmdc:mga03n38_34682_c1 3300050490 Bacteria 2157
171 nmdc:mga00v17_18673_c1 3300050491 Bacteria 3944
172 nmdc:mga0yw44_10946_c1 3300050492 Bacteria 4654
173 nmdc:mga0yw44_135139_c1 3300050492 Bacteria 1599
174 nmdc:mga06z11_79471_c1 3300050494 Bacteria 1756
175 nmdc:mga07m45_35181_c2 3300050496 Bacteria 2384
176 Ga0495601_0049150 3300053077 Bacteria 2659
177 Ga0500556_0008224 3300053104 Bacteria 3005
178 Ga0500593_000188 3300053117 Bacteria 25071
179 2626636915 2626541554 Bacteria 7741902
180 2643824274 2643221561 Bacteria 4984412
181 2644091023 2643221615 Bacteria 5487866
182 2644320826 2643221657 Bacteria 5490246
183 2644533578 2643221696 Bacteria 5431823
184 2812332720 2811994874 Bacteria 5367947
185 2855390842 2855386786 Bacteria 4752232
186 Ga0530510_0156237
187 LJQas_1001382
188 JGI25406J46586_10012714
189 JGI25407J50210_10046315
190 Ga0070683_100052508
191 Ga0070682_100040495
192 Ga0070682_100399578
193 Ga0068868_100133358
194 Ga0068868_100566444
195 Ga0070691_10030965
196 Ga0070692_10002077
197 Ga0070692_10015182
198 Ga0070692_10169916
199 Ga0070669_100080093
200 Ga0070673_100074275
201 Ga0070688_100321194
202 Ga0070659_100112858
203 Ga0070700_100010748
204 Ga0070700_100139251
205 Ga0070694_100433135
206 Ga0070708_100106855
207 Ga0070678_100264959
208 Ga0068867_100007292
209 Ga0070679_100587860
210 Ga0070686_100347988
211 Ga0068854_100012725
212 Ga0070702_100033598
213 Ga0070702_100147850
214 Ga0068852_100016376
215 Ga0068861_100286623
216 Ga0068851_10204641
217 Ga0068870_10009397
218 Ga0081455_10076002
219 Ga0081455_10133345
220 Ga0081538_10005756
221 Ga0081538_10045058
222 Ga0081540_1013146
223 Ga0081539_10000895
224 Ga0081539_10061127
225 Ga0075363_100016100
226 Ga0075364_10024460
227 Ga0075370_10024518
228 Ga0075370_10082872
229 Ga0075431_100018190
230 Ga0068865_100078431
231 Ga0111539_10478244
232 Ga0105245_10149780
233 Ga0105245_10159267
234 Ga0105245_10495597
235 Ga0105243_10008980
236 Ga0105243_10146100
237 Ga0105243_10211160
238 Ga0105243_10211711
239 Ga0105243_10703839
240 Ga0105249_10033597
241 Ga0105249_10177786
242 Ga0105246_10028663
243 Ga0157372_10071910
244 Ga0157372_10296538
245 Ga0157375_10048133
246 Ga0157375_10425250
247 Ga0163163_10144522
248 Ga0157380_10060199
249 Ga0157377_10097820
250 Ga0157379_10260861
251 Ga0157379_10614132
252 Ga0163161_10013070
253 Ga0207710_10047325
254 Ga0207688_10033063
255 Ga0207662_10022783
256 Ga0207662_10071619
257 Ga0207652_10464170
258 Ga0207681_10676571
259 Ga0207690_10072478
260 Ga0207709_10054567
261 Ga0207709_10191082
262 Ga0207669_10640076
263 Ga0207704_10251293
264 Ga0207691_10028468
265 Ga0207661_10153972
266 Ga0207679_10568489
267 Ga0207668_10098062
268 Ga0207640_10077233
269 Ga0207640_10442311
270 Ga0207677_10097610
271 Ga0207703_10176997
272 Ga0207708_10021866
273 Ga0207708_10120648
274 Ga0207648_10004668
275 Ga0207648_10180380
276 Ga0207648_10697598
277 Ga0207675_100006537
278 Ga0207675_100131393
279 Ga0207683_10256343
280 Ga0207683_10526249
281 Ga0207698_10134599
282 Ga0307405_10440492
283 Ga0307413_10092772
284 Ga0307410_10144641
285 Ga0307406_10148943
286 Ga0307406_10214908
287 Ga0307407_10023088
288 Ga0307407_10170483
289 Ga0307407_10257228
290 Ga0307412_10200631
291 Ga0307409_100048124
292 Ga0307409_100255951
293 Ga0307409_100431334
294 Ga0307416_100021445
295 Ga0307416_100062155
296 Ga0307416_100107846
297 Ga0307414_10047433
298 Ga0307414_10417124
299 Ga0307411_10265601
300 Ga0307411_10320333
301 Ga0307411_10593894
302 Ga0307415_100022917
303 Ga0307415_100432929
304 Ga0316574_0078218
305 Ga0316574_0247131
306 Ga0395898_0827119
307 Ga0395905_0169634
308 Ga0400483_128338
309 Ga0439433_0011818
310 Ga0439457_000737
311 Ga0466965_0073472
312 Ga0466965_0086380
313 Ga0466963_0047924
314 Ga0466963_0366484
315 Ga0466957_0066789
316 Ga0466960_0000697
317 Ga0466960_0034578
318 Ga0466960_0128420
319 Ga0466960_0146079
320 Ga0466960_0146631
321 Ga0466967_0016948
322 Ga0466967_0089323
323 Ga0466967_1072241
324 Ga0495664_0021425
325 Ga0496101_0011331
326 Ga0496102_0000044
327 Ga0496102_0132505
328 Ga0496103_0000123
329 Ga0496103_0247633
330 Ga0496106_0020088
331 Ga0496108_0086641
332 Ga0496110_0046158
333 Ga0496110_0072049
334 Ga0496110_0125487
335 Ga0496111_0149664
336 Ga0496114_0040521
337 Ga0496114_0707347
338 Ga0496115_0014927
339 Ga0496115_0145680
340 Ga0496117_0039228
341 Ga0496118_0007809
342 Ga0496119_0005652
343 Ga0501034_0024356
344 Ga0501039_0081478
345 Ga0501039_0140123
346 Ga0501068_0083324
347 Ga0501069_0041789
348 Ga0501070_0359326
349 Ga0501070_0429648
350 Ga0501075_0512533
351 Ga0501075_0638192
352 Ga0501080_0034410
353 Ga0501044_0779128
354 Ga0501045_0274554
355 nmdc:mga03n38_34682_c1
356 nmdc:mga00v17_18673_c1
357 nmdc:mga0yw44_10946_c1
358 nmdc:mga0yw44_135139_c1
359 nmdc:mga06z11_79471_c1
360 nmdc:mga07m45_35181_c2
361 Ga0495601_0049150
362 Ga0500556_0008224
363 Ga0500593_000188
364 2626636915
365 2643824274
366 2644091023
367 2644320826
368 2644533578
369 2812332720
370 2855390842

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00005

ABC_tran

ABC transporter

65

212

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
5xu1-assembly1.cif.gz_A structure of a non-canonical abc transporter from streptococcus pneumoniae r6 0.9457 4 223
1f3o-assembly1.cif.gz_A-2 crystal structure of mj0796 atp-binding cassette 0.9393 5 228
5xu1-assembly1.cif.gz_B structure of a non-canonical abc transporter from streptococcus pneumoniae r6 0.9382 4 223
7w7b-assembly2.cif.gz_G heme exporter hrtba in complex with protoporphyrin ix containing manganese(iii), high resolution data 0.9379 1 221
7w7a-assembly2.cif.gz_E heme exporter in complex with mn-containing protoporphyrin ix, mn-anomalous data 0.9352 3 219
ID Description Score Start End Superfamily
af_Q2G0D8_1_227_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9554 3 225 3.40.50.300
af_Q2G167_1_224_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9515 5 228 3.40.50.300
af_Q8T665_1_248_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9472 3 225 3.40.50.300
5xu1A00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9457 4 223 3.40.50.300
af_Q2G167_1_224_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9433 5 228 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A1V4DN81-F1-model_v4 Peptide ABC transporter ATP-binding protein 0.9839 2 228 GO:0005524
GO:0005886
GO:0016887
GO:0022857
AF-A0A4P8II76-F1-model_v4 ABC transporter ATP-binding protein 0.9691 1 222 GO:0005524
GO:0016887
AF-A0A2P9ANQ0-F1-model_v4 Lipoprotein-releasing system ATP-binding protein LolD (EC 3.6.3.-) 0.9621 1 221 GO:0005524
GO:0005886
GO:0016887
GO:0022857
AF-A0A7V9TM51-F1-model_v4 ABC transporter ATP-binding protein 0.9602 23 225 GO:0005524
GO:0005886
GO:0016887
GO:0022857
AF-A0A2D4VMT8-F1-model_v4 ABC transporter 0.9587 3 222 GO:0005524
GO:0005886
GO:0016887
GO:0022857
GO:0044874
GO:0089705

Map