F284857

General Info

Members Datasets Scaffolds Average Seq Length
185 148 370 151

Family's Representative Sequence

Representative Sequence 3300046460|Ga0495638_0451066|Ga0495638_0451066_16_555
Length 179
Sequence MTDSTIKVRLVRLAHARGLDLPAYQSAAAAGLDLVAAVERKKPMVLKPGERALVPTGLIMELPSGYEGQVRPRSGLAFKHGVTVLNSPGTIDSDYRGEVKVLLVNLGSEPFEIVRGERIAQLVVAPVSQATLVGARALSSTERGAGGFGSTRMTASPARKKIPSKRASSLRGSRGRGVQ

Samples

Sample ID Description Type Environment
1 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
2 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
3 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
4 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
5 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
6 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
7 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
8 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
9 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
10 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
11 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
12 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
13 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
14 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
15 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
16 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
17 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
18 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
19 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
20 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
21 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
22 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
23 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
24 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
25 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
26 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
27 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
28 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
29 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
30 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
31 3300012513 Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.2.old.250510 Metagenome Rhizosphere
32 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
33 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
34 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
35 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
36 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
37 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
38 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300027695 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes) (version 2) Metagenome Rhizosphere
55 3300027717 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes) (version 2) Metagenome Rhizosphere
56 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
57 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
58 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
59 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
60 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
61 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
62 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
63 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
64 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
65 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
66 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
67 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
68 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
69 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
70 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
71 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
72 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
73 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
74 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
75 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
76 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
77 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
78 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
79 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
80 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
81 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
82 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
83 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
84 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
85 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
86 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
87 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
88 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
89 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
90 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
91 3300042126 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0218F_E14_070516_87 Metagenome Rhizosphere
92 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
93 3300042532 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0126L_E14_070516_92 Metagenome Rhizosphere
94 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
95 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
96 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
97 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
98 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
99 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
100 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
101 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
102 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
103 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
104 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
105 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
106 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
107 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
108 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
109 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
110 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
111 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
112 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
113 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
114 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
115 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
116 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
117 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
118 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
119 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
120 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
121 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
122 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
123 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
124 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
125 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
126 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
127 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
128 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
129 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
130 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
131 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
132 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
133 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
134 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
135 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
136 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
137 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
138 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
139 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
140 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
141 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
142 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
143 2508501114 Microvirga lotononidis WSM3557 Isolate Nodule
144 2775506901 Microvirga ossetica V5/3m Isolate Unclassified
145 2835312727 Microvirga calopogonii CCBAU 65841 Isolate Nodule
146 2882806704 Pelagerythrobacter rhizovicinus AY-3R Isolate Rhizosphere
147 2894232714 Microvirga tunisiensis Lmie10 Isolate Nodule
148 8001845381 Ancylobacter sonchi VKM B-3145 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 96.76
Metatranscriptomes 0
Isolates 3.24

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 1.62
Rhizoplane 8.65
Rhizosphere 85.95
Stem 0
Stem Tuber 0
Unclassified 0.54

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495638_0451066 3300046460 Bacteria 657
2 rootL2_10184101 3300003322 Bacteria 4739
3 Ga0070674_101019090 3300005356 Bacteria 727
4 Ga0070659_100016971 3300005366 Bacteria 5473
5 Ga0070700_100148024 3300005441 Bacteria 1603
6 Ga0070708_100002973 3300005445 Bacteria 13171
7 Ga0070708_100503199 3300005445 Bacteria 1143
8 Ga0070706_100117834 3300005467 Bacteria 2473
9 Ga0070699_100016279 3300005518 Bacteria 6386
10 Ga0070679_100013672 3300005530 Bacteria 7774
11 Ga0070684_100132353 3300005535 Bacteria 2250
12 Ga0070697_100057417 3300005536 Bacteria 3166
13 Ga0068853_100021693 3300005539 Bacteria 5358
14 Ga0070672_100997513 3300005543 Bacteria 742
15 Ga0070704_100471801 3300005549 Bacteria 1084
16 Ga0068855_100060599 3300005563 Bacteria 4425
17 Ga0068855_101663844 3300005563 Unclassified 652
18 Ga0068857_100154790 3300005577 Bacteria 2078
19 Ga0068857_101097412 3300005577 Bacteria 768
20 Ga0070702_101092867 3300005615 Bacteria 637
21 Ga0068852_100989755 3300005616 Bacteria 859
22 Ga0081455_10000431 3300005937 Bacteria 55069
23 Ga0068871_101730138 3300006358 Bacteria 593
24 Ga0075431_100584501 3300006847 Bacteria 1102
25 Ga0075433_10430255 3300006852 Bacteria 1164
26 Ga0099794_10007210 3300007265 Bacteria 4551
27 Ga0099794_10098640 3300007265 Bacteria 1456
28 Ga0105251_10202534 3300009011 Bacteria 894
29 Ga0105240_10206883 3300009093 Bacteria 2296
30 Ga0111539_10153189 3300009094 Bacteria 2698
31 Ga0105243_10505232 3300009148 Bacteria 1146
32 Ga0105237_10270293 3300009545 Bacteria 1703
33 Ga0105238_10065729 3300009551 Bacteria 3628
34 Ga0105238_10743315 3300009551 Bacteria 994
35 Ga0105239_10029774 3300010375 Bacteria 6003
36 Ga0105239_10048218 3300010375 Bacteria 4671
37 Ga0105239_10099524 3300010375 Bacteria 3215
38 Ga0157326_1001434 3300012513 Bacteria 2639
39 Ga0157374_10000291 3300013296 Bacteria 46237
40 Ga0157372_10113458 3300013307 Bacteria 3106
41 Ga0163163_10008985 3300014325 Bacteria 8904
42 Ga0157380_10167439 3300014326 Bacteria 1916
43 Ga0157376_10634066 3300014969 Bacteria 1067
44 Ga0213875_10016567 3300021388 Bacteria 3572
45 Ga0207688_10099045 3300025901 Bacteria 1681
46 Ga0207647_10016831 3300025904 Bacteria 4981
47 Ga0207684_10592280 3300025910 Bacteria 947
48 Ga0207695_10745205 3300025913 Bacteria 860
49 Ga0207671_10238008 3300025914 Bacteria 1429
50 Ga0207694_10161259 3300025924 Bacteria 1811
51 Ga0207706_10313229 3300025933 Bacteria 1366
52 Ga0207706_10427460 3300025933 Bacteria 1147
53 Ga0207709_10486875 3300025935 Bacteria 960
54 Ga0207669_10596492 3300025937 Bacteria 897
55 Ga0207667_10084035 3300025949 Bacteria 3296
56 Ga0207668_10292889 3300025972 Bacteria 1340
57 Ga0207658_10048725 3300025986 Bacteria 3108
58 Ga0207703_10243219 3300026035 Bacteria 1619
59 Ga0207674_10178049 3300026116 Bacteria 2078
60 Ga0207698_10059340 3300026142 Bacteria 2970
61 Ga0209588_1138095 3300027671 Bacteria 776
62 Ga0209966_1050294 3300027695 Bacteria 885
63 Ga0209998_10096789 3300027717 Bacteria 728
64 Ga0207428_11235504 3300027907 Bacteria 519
65 Ga0265319_1088301 3300028563 Bacteria 980
66 Ga0265334_10244273 3300028573 Bacteria 619
67 Ga0265339_10343079 3300031249 Bacteria 705
68 Ga0265327_10038365 3300031251 Bacteria 2614
69 Ga0307408_100000059 3300031548 Bacteria 134620
70 Ga0316575_10038654 3300031665 Bacteria 1882
71 Ga0316579_10296888 3300031691 Bacteria 781
72 Ga0316579_10355171 3300031691 Bacteria 709
73 Ga0316576_10155214 3300031727 Bacteria 1725
74 Ga0316578_10002115 3300031728 Bacteria 8524
75 Ga0307405_10079761 3300031731 Bacteria 2135
76 Ga0307405_10686465 3300031731 Bacteria 846
77 Ga0307410_10121632 3300031852 Bacteria 1904
78 Ga0307410_11521404 3300031852 Bacteria 590
79 Ga0307406_10101323 3300031901 Bacteria 1962
80 Ga0307406_10674332 3300031901 Bacteria 860
81 Ga0307407_10076810 3300031903 Bacteria 2006
82 Ga0307407_10885254 3300031903 Bacteria 684
83 Ga0307409_100114092 3300031995 Bacteria 2272
84 Ga0307416_100041038 3300032002 Bacteria 3601
85 Ga0307416_100783042 3300032002 Bacteria 1048
86 Ga0307416_103114545 3300032002 Bacteria 555
87 Ga0307414_10112238 3300032004 Bacteria 2077
88 Ga0307414_10217717 3300032004 Bacteria 1565
89 Ga0307411_10051369 3300032005 Bacteria 2689
90 Ga0307411_10260566 3300032005 Bacteria 1369
91 Ga0307415_100084386 3300032126 Bacteria 2279
92 Ga0316583_10002806 3300032133 Bacteria 6092
93 Ga0316583_10024721 3300032133 Bacteria 2145
94 Ga0373943_0486657 3300035170 Bacteria 720
95 Ga0373946_0057418 3300035171 Bacteria 1646
96 Ga0316574_0003955 3300035398 Bacteria 7711
97 Ga0373947_0502492 3300035725 Bacteria 824
98 Ga0316582_0080367 3300036647 Bacteria 2128
99 Ga0316584_0025417 3300036712 Bacteria 4342
100 Ga0373925_0250909 3300037068 Bacteria 1419
101 Ga0395900_0068649 3300037418 Bacteria 3643
102 Ga0395898_0344663 3300037466 Bacteria 1421
103 Ga0436364_0532105 3300037853 Bacteria 12945
104 Ga0436364_0855013 3300037853 Bacteria 702
105 Ga0395901_0357381 3300038443 Bacteria 1507
106 Ga0400487_36956 3300039110 Bacteria 2849
107 Ga0451807_1153026 3300041486 Bacteria 1212
108 Ga0439432_051374 3300042006 Bacteria 1285
109 Ga0439449_0122463 3300042007 Bacteria 966
110 Ga0450888_025035 3300042126 Bacteria 778
111 Ga0439434_0003420 3300042435 Bacteria 4638
112 Ga0439434_0024911 3300042435 Bacteria 1805
113 Ga0450893_0028067 3300042532 Bacteria 994
114 Ga0451577_0620996 3300042876 Bacteria 980
115 Ga0466972_0051927 3300044658 Bacteria 1977
116 Ga0453684_0038496 3300044712 Bacteria 6537
117 Ga0466960_0396100 3300044901 Bacteria 795
118 Ga0495641_0271714 3300046461 Bacteria 763
119 Ga0495639_0028721 3300046475 Bacteria 2465
120 Ga0495588_0069621 3300046674 Bacteria 1829
121 Ga0495588_0327065 3300046674 Bacteria 806
122 Ga0495581_0164954 3300047315 Bacteria 1295
123 Ga0495676_0069177 3300047321 Bacteria 2725
124 Ga0496100_0107223 3300048903 Bacteria 1935
125 Ga0496102_0068719 3300048905 Bacteria 3251
126 Ga0496104_0074141 3300048907 Bacteria 3239
127 Ga0496105_0051908 3300048908 Bacteria 3385
128 Ga0496106_0317130 3300048909 Bacteria 1251
129 Ga0496108_0005402 3300048911 Bacteria 10329
130 Ga0496109_0010281 3300048912 Bacteria 7988
131 Ga0496110_0009864 3300048913 Bacteria 7739
132 Ga0496110_0046322 3300048913 Bacteria 3804
133 Ga0496111_0004181 3300048914 Bacteria 9082
134 Ga0496112_0034046 3300048915 Bacteria 4956
135 Ga0496113_0004011 3300048916 Bacteria 8954
136 Ga0496114_0000045 3300048917 Bacteria 126886
137 Ga0496114_0254803 3300048917 Bacteria 1544
138 Ga0496115_0012057 3300048918 Bacteria 6499
139 Ga0501031_0210760 3300049568 Bacteria 1266
140 Ga0501032_0163169 3300049569 Bacteria 1463
141 Ga0501033_0092041 3300049570 Bacteria 2218
142 Ga0501036_0088619 3300049572 Bacteria 2615
143 Ga0501037_0211670 3300049573 Bacteria 1367
144 Ga0501038_0411847 3300049574 Bacteria 1044
145 Ga0501039_0147133 3300049575 Bacteria 1851
146 Ga0501039_0278309 3300049575 Bacteria 1315
147 Ga0501040_0168692 3300049576 Bacteria 1549
148 Ga0501040_0491765 3300049576 Bacteria 884
149 Ga0501040_0722285 3300049576 Bacteria 720
150 Ga0501042_0066700 3300049578 Bacteria 2573
151 Ga0501042_0069429 3300049578 Bacteria 2520
152 Ga0501046_0177988 3300049580 Bacteria 1592
153 Ga0501046_0809081 3300049580 Bacteria 656
154 Ga0501048_0384645 3300049582 Bacteria 1002
155 Ga0501048_1019667 3300049582 Bacteria 595
156 Ga0501071_0021646 3300049587 Bacteria 4480
157 Ga0501071_0198387 3300049587 Bacteria 1507
158 Ga0501072_0299920 3300049588 Bacteria 1277
159 Ga0501073_0403536 3300049589 Bacteria 944
160 Ga0501074_0058992 3300049590 Bacteria 2765
161 Ga0501075_0384378 3300049591 Bacteria 1070
162 Ga0501077_0003542 3300049593 Bacteria 9381
163 Ga0501077_0022371 3300049593 Bacteria 4004
164 Ga0501077_0699457 3300049593 Bacteria 651
165 Ga0501079_0381231 3300049741 Bacteria 1105
166 Ga0501080_0035058 3300049742 Bacteria 4685
167 Ga0501081_0002512 3300049743 Bacteria 11565
168 Ga0501045_0019564 3300049824 Bacteria 4829
169 Ga0501045_0057054 3300049824 Bacteria 2857
170 Ga0501045_0410486 3300049824 Bacteria 1007
171 nmdc:mga08y16_180145_c1 3300050511 Bacteria 2194
172 nmdc:mga0n895_353590_c1 3300050512 Bacteria 1488
173 nmdc:mga0a205_392940_c1 3300050515 Bacteria 1251
174 Ga0501084_0032583 3300054114 Bacteria 4359
175 Ga0501082_0074675 3300060353 Bacteria 2920
176 Ga0501082_0342046 3300060353 Bacteria 1304
177 Ga0530510_0057610 3300061734 Bacteria 2808
178 Ga0530510_0326594 3300061734 Bacteria 1150
179 Ga0530510_0902246 3300061734 Bacteria 675
180 2509074912 2508501114 Bacteria 7082538
181 2776262793 2775506901 Bacteria 9631051
182 2835317561 2835312727 Bacteria 7413381
183 2882808965 2882806704 Bacteria 3007728
184 2894241311 2894232714 Bacteria 8834183
185 8001848097 8001845381 Bacteria 5804942
186 Ga0495638_0451066
187 rootL2_10184101
188 Ga0070674_101019090
189 Ga0070659_100016971
190 Ga0070700_100148024
191 Ga0070708_100002973
192 Ga0070708_100503199
193 Ga0070706_100117834
194 Ga0070699_100016279
195 Ga0070679_100013672
196 Ga0070684_100132353
197 Ga0070697_100057417
198 Ga0068853_100021693
199 Ga0070672_100997513
200 Ga0070704_100471801
201 Ga0068855_100060599
202 Ga0068855_101663844
203 Ga0068857_100154790
204 Ga0068857_101097412
205 Ga0070702_101092867
206 Ga0068852_100989755
207 Ga0081455_10000431
208 Ga0068871_101730138
209 Ga0075431_100584501
210 Ga0075433_10430255
211 Ga0099794_10007210
212 Ga0099794_10098640
213 Ga0105251_10202534
214 Ga0105240_10206883
215 Ga0111539_10153189
216 Ga0105243_10505232
217 Ga0105237_10270293
218 Ga0105238_10065729
219 Ga0105238_10743315
220 Ga0105239_10029774
221 Ga0105239_10048218
222 Ga0105239_10099524
223 Ga0157326_1001434
224 Ga0157374_10000291
225 Ga0157372_10113458
226 Ga0163163_10008985
227 Ga0157380_10167439
228 Ga0157376_10634066
229 Ga0213875_10016567
230 Ga0207688_10099045
231 Ga0207647_10016831
232 Ga0207684_10592280
233 Ga0207695_10745205
234 Ga0207671_10238008
235 Ga0207694_10161259
236 Ga0207706_10313229
237 Ga0207706_10427460
238 Ga0207709_10486875
239 Ga0207669_10596492
240 Ga0207667_10084035
241 Ga0207668_10292889
242 Ga0207658_10048725
243 Ga0207703_10243219
244 Ga0207674_10178049
245 Ga0207698_10059340
246 Ga0209588_1138095
247 Ga0209966_1050294
248 Ga0209998_10096789
249 Ga0207428_11235504
250 Ga0265319_1088301
251 Ga0265334_10244273
252 Ga0265339_10343079
253 Ga0265327_10038365
254 Ga0307408_100000059
255 Ga0316575_10038654
256 Ga0316579_10296888
257 Ga0316579_10355171
258 Ga0316576_10155214
259 Ga0316578_10002115
260 Ga0307405_10079761
261 Ga0307405_10686465
262 Ga0307410_10121632
263 Ga0307410_11521404
264 Ga0307406_10101323
265 Ga0307406_10674332
266 Ga0307407_10076810
267 Ga0307407_10885254
268 Ga0307409_100114092
269 Ga0307416_100041038
270 Ga0307416_100783042
271 Ga0307416_103114545
272 Ga0307414_10112238
273 Ga0307414_10217717
274 Ga0307411_10051369
275 Ga0307411_10260566
276 Ga0307415_100084386
277 Ga0316583_10002806
278 Ga0316583_10024721
279 Ga0373943_0486657
280 Ga0373946_0057418
281 Ga0316574_0003955
282 Ga0373947_0502492
283 Ga0316582_0080367
284 Ga0316584_0025417
285 Ga0373925_0250909
286 Ga0395900_0068649
287 Ga0395898_0344663
288 Ga0436364_0532105
289 Ga0436364_0855013
290 Ga0395901_0357381
291 Ga0400487_36956
292 Ga0451807_1153026
293 Ga0439432_051374
294 Ga0439449_0122463
295 Ga0450888_025035
296 Ga0439434_0003420
297 Ga0439434_0024911
298 Ga0450893_0028067
299 Ga0451577_0620996
300 Ga0466972_0051927
301 Ga0453684_0038496
302 Ga0466960_0396100
303 Ga0495641_0271714
304 Ga0495639_0028721
305 Ga0495588_0069621
306 Ga0495588_0327065
307 Ga0495581_0164954
308 Ga0495676_0069177
309 Ga0496100_0107223
310 Ga0496102_0068719
311 Ga0496104_0074141
312 Ga0496105_0051908
313 Ga0496106_0317130
314 Ga0496108_0005402
315 Ga0496109_0010281
316 Ga0496110_0009864
317 Ga0496110_0046322
318 Ga0496111_0004181
319 Ga0496112_0034046
320 Ga0496113_0004011
321 Ga0496114_0000045
322 Ga0496114_0254803
323 Ga0496115_0012057
324 Ga0501031_0210760
325 Ga0501032_0163169
326 Ga0501033_0092041
327 Ga0501036_0088619
328 Ga0501037_0211670
329 Ga0501038_0411847
330 Ga0501039_0147133
331 Ga0501039_0278309
332 Ga0501040_0168692
333 Ga0501040_0491765
334 Ga0501040_0722285
335 Ga0501042_0066700
336 Ga0501042_0069429
337 Ga0501046_0177988
338 Ga0501046_0809081
339 Ga0501048_0384645
340 Ga0501048_1019667
341 Ga0501071_0021646
342 Ga0501071_0198387
343 Ga0501072_0299920
344 Ga0501073_0403536
345 Ga0501074_0058992
346 Ga0501075_0384378
347 Ga0501077_0003542
348 Ga0501077_0022371
349 Ga0501077_0699457
350 Ga0501079_0381231
351 Ga0501080_0035058
352 Ga0501081_0002512
353 Ga0501045_0019564
354 Ga0501045_0057054
355 Ga0501045_0410486
356 nmdc:mga08y16_180145_c1
357 nmdc:mga0n895_353590_c1
358 nmdc:mga0a205_392940_c1
359 Ga0501084_0032583
360 Ga0501082_0074675
361 Ga0501082_0342046
362 Ga0530510_0057610
363 Ga0530510_0326594
364 Ga0530510_0902246
365 2509074912
366 2776262793
367 2835317561
368 2882808965
369 2894241311
370 8001848097

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00692

dUTPase

dUTPase

18

152

0.93

PF22769

DCD

dCTP deaminase-like

11

127

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
7n56-assembly3.cif.gz_K crystal structure of deoxyuridine 5'-triphosphate nucleotidohydrolase from rickettsia prowazekii str. madrid e 0.9807 1 129
6hde-assembly1.cif.gz_C structure of escherichia coli dutpase q93h mutant 0.9701 1 128
1rnj-assembly1.cif.gz_A crystal structure of inactive mutant dutpase complexed with substrate analogue imido-dutp 0.9695 1 128
4lhr-assembly1.cif.gz_A crystal structure of a deoxyuridine 5'-triphosphate nucleotidohydrolase from burkholderia thailandensis 0.9656 1 128
1dup-assembly1.cif.gz_A deoxyuridine 5'-triphosphate nucleotido hydrolase (d-utpase) 0.9656 1 128
ID Description Score Start End Superfamily
3mbqA00 Mainly Beta;Distorted Sandwich;Deoxyuridine 5'-Triphosphate Nucleotidohydrolase; Chain A;Deoxyuridine triphosphatase (dUTPase) 0.9553 2 129 2.70.40.10
1snfC00 Mainly Beta;Distorted Sandwich;Deoxyuridine 5'-Triphosphate Nucleotidohydrolase; Chain A;Deoxyuridine triphosphatase (dUTPase) 0.9393 1 128 2.70.40.10
1sjnC00 Mainly Beta;Distorted Sandwich;Deoxyuridine 5'-Triphosphate Nucleotidohydrolase; Chain A;Deoxyuridine triphosphatase (dUTPase) 0.9322 1 138 2.70.40.10
1snfC00 Mainly Beta;Distorted Sandwich;Deoxyuridine 5'-Triphosphate Nucleotidohydrolase; Chain A;Deoxyuridine triphosphatase (dUTPase) 0.9253 1 128 2.70.40.10
2p9oA00 Mainly Beta;Distorted Sandwich;Deoxyuridine 5'-Triphosphate Nucleotidohydrolase; Chain A;Deoxyuridine triphosphatase (dUTPase) 0.9252 2 130 2.70.40.10
ID Description Score Start End GO Terms
AF-A0A656KD48-F1-model_v4 deleted 0.9998 25 117
AF-A0A7X9CIF6-F1-model_v4 dUTP diphosphatase (EC 3.6.1.23) 0.9961 1 113 GO:0000287
GO:0004170
GO:0006226
GO:0046081
AF-A0A359GZM5-F1-model_v4 dUTP diphosphatase (EC 3.6.1.23) 0.9896 1 125 GO:0000287
GO:0004170
GO:0006226
GO:0046081
AF-A0A136LCH2-F1-model_v4 deleted 0.988 1 133
AF-F8DS81-F1-model_v4 dUTP diphosphatase (EC 3.6.1.23) 0.9869 2 127 GO:0000287
GO:0004170
GO:0006226
GO:0046081

Map