F284603

General Info

Members Datasets Scaffolds Average Seq Length
185 109 185 696

Family's Representative Sequence

Representative Sequence 3300031995|Ga0307409_100036113|Ga0307409_1000361132
Length 731
Sequence MQWSWRGDDGSSRVAIRQSPDNHLRHVRRPATGDRRLTMSAFTTQHENGIAVIAFDLPGEPVNKLSAAARVELEALLIGLRDDPATRAVVLISGKADNFIAGADIEEFTALTSQDAAERLSFEGQETVSRVETFHKPIVAAIHGACLGGGLELALACHYRIATDHPKTQLGLPEVQLGLIPGAGGCQRLPRLVGARAALDMILTGKSERASKALRLGLVDEVVPRSILRQVAVVAADRLIREGMPKRVSKGGLQGLVLDRTAAGRRLVYRAARKQVLKKTGGHYPAPLAALEAVRVGLEQGVTAGLAEEHRAFGELAVGDVSRKLVQIFFATTALKKDDGVPPGTASPRQIRRLGIVGSEVDTRLKDSDLTRVGKGLKAATRLLADRLEKRRLTRSQYERLFALLSGSADYSGFNRADLVIEAVFEDLETKRKVLAEVEAVLRPEAILATNTSTIPIRQIAEHARRPERILGMHFFSPVERMPLLEVIPTEVTSPDTLVTAVRFGRRMGKTVIVVADRPGFWVNRILSPYLNEAGHLLQEGVPIELIDQVMTRIGFPVGPVALLDEVGLDVAEKAGGVMHEAFGERMKPAGALSRMLGATRLGRKNGRGFYRYKQGHKSGVDTSVYPLLGVRPTEADPDLVQRRLLYAMLNEAAMGCAENVVRSPRDADIGAIFGIGFPAFRGGPLRMIDDLGPGRVVETLYQLQEVFGERFRPAPSLLEMTRRSGRYYPA

Samples

Sample ID Description Type Environment
1 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
2 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
3 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
4 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
5 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
6 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
7 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
8 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
9 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
10 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
11 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
12 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
13 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
14 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
15 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
16 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
17 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
18 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
19 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
20 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
21 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
22 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
23 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
24 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
25 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
26 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
27 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
28 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
29 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
30 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
31 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
32 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
33 3300009987 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_213 metaG Metagenome Rhizosphere
34 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
35 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
36 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
37 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
38 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
39 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
40 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
52 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
53 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
54 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
55 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
56 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
57 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
58 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
59 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
60 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
61 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
62 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
63 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
64 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
65 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
66 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
67 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
68 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
69 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
70 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
71 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
72 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
73 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
74 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
75 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
76 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
77 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
78 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
79 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
80 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
81 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
82 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
83 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
84 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
85 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
86 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
87 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
88 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
89 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
90 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
91 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
92 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
93 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
94 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
95 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
96 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
97 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
98 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
99 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
100 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
101 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
102 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
103 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
104 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
105 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
106 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
107 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
108 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
109 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 10.81
Rhizosphere 89.19
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070680_100006364 3300005336 Bacteria 8969
2 Ga0070680_100010631 3300005336 Bacteria 7100
3 Ga0070680_100065753 3300005336 Bacteria 2972
4 Ga0070680_100104909 3300005336 Bacteria 2349
5 Ga0070668_100007948 3300005347 Bacteria 7877
6 Ga0070671_100004680 3300005355 Bacteria 10858
7 Ga0070659_100019590 3300005366 Bacteria 5130
8 Ga0070711_100001175 3300005439 Bacteria 14084
9 Ga0070705_100019551 3300005440 Bacteria 3565
10 Ga0070708_100003342 3300005445 Bacteria 12558
11 Ga0070706_100009444 3300005467 Bacteria 9077
12 Ga0070706_100018829 3300005467 Bacteria 6367
13 Ga0070707_100001461 3300005468 Bacteria 23139
14 Ga0070707_100005620 3300005468 Bacteria 11721
15 Ga0070698_100000315 3300005471 Bacteria 49156
16 Ga0070698_100004916 3300005471 Bacteria 14659
17 Ga0070699_100000959 3300005518 Bacteria 26914
18 Ga0070699_100002689 3300005518 Bacteria 15898
19 Ga0070699_100003283 3300005518 Bacteria 14301
20 Ga0070699_100010355 3300005518 Bacteria 8063
21 Ga0070699_100011940 3300005518 Bacteria 7497
22 Ga0070679_100006118 3300005530 Bacteria 11195
23 Ga0070679_100081738 3300005530 Bacteria 3220
24 Ga0070697_100005794 3300005536 Bacteria 9526
25 Ga0070672_100020123 3300005543 Bacteria 4863
26 Ga0070696_100010082 3300005546 Bacteria 6323
27 Ga0070696_100056687 3300005546 Bacteria 2733
28 Ga0070665_100034011 3300005548 Bacteria 5126
29 Ga0070704_100001105 3300005549 Bacteria 14008
30 Ga0070704_100003803 3300005549 Bacteria 8694
31 Ga0070704_100014409 3300005549 Bacteria 4938
32 Ga0068857_100013663 3300005577 Bacteria 7074
33 Ga0068859_100026324 3300005617 Bacteria 5831
34 Ga0068859_100074877 3300005617 Bacteria 3425
35 Ga0068864_100004008 3300005618 Bacteria 12122
36 Ga0068863_100006295 3300005841 Bacteria 11649
37 Ga0068863_100020357 3300005841 Bacteria 6344
38 Ga0068860_100001521 3300005843 Bacteria 24972
39 Ga0081455_10031690 3300005937 Bacteria 4777
40 Ga0075428_100006694 3300006844 Bacteria 12820
41 Ga0075428_100040089 3300006844 Bacteria 5154
42 Ga0075428_100064569 3300006844 Bacteria 4009
43 Ga0075431_100004819 3300006847 Bacteria 13288
44 Ga0075431_100044592 3300006847 Bacteria 4574
45 Ga0075434_100026308 3300006871 Bacteria 5699
46 Ga0075429_100001714 3300006880 Bacteria 18138
47 Ga0075429_100056663 3300006880 Bacteria 3412
48 Ga0097620_100026323 3300006931 Bacteria 5831
49 Ga0097620_100074877 3300006931 Bacteria 3425
50 Ga0075435_100033123 3300007076 Bacteria 4084
51 Ga0111539_10046589 3300009094 Bacteria 5186
52 Ga0114129_10000384 3300009147 Bacteria 51412
53 Ga0114129_10018169 3300009147 Bacteria 10013
54 Ga0114129_10038706 3300009147 Bacteria 6724
55 Ga0114129_10056822 3300009147 Bacteria 5479
56 Ga0114129_10058498 3300009147 Bacteria 5391
57 Ga0105248_10012883 3300009177 Bacteria 9221
58 Ga0105248_10015364 3300009177 Bacteria 8444
59 Ga0105248_10048660 3300009177 Bacteria 4756
60 Ga0105030_101016 3300009987 Bacteria 2498
61 Ga0105239_10021895 3300010375 Bacteria 7047
62 Ga0105246_10011034 3300011119 Bacteria 5599
63 Ga0163162_10067461 3300013306 Bacteria 3628
64 Ga0157375_10023870 3300013308 Bacteria 5649
65 Ga0163163_10014982 3300014325 Bacteria 7146
66 Ga0163163_10048842 3300014325 Bacteria 4162
67 Ga0163163_10155846 3300014325 Bacteria 2329
68 Ga0157379_10069024 3300014968 Bacteria 3160
69 Ga0207643_10003069 3300025908 Bacteria 8978
70 Ga0207684_10016327 3300025910 Bacteria 6375
71 Ga0207684_10063461 3300025910 Bacteria 3136
72 Ga0207707_10009370 3300025912 Bacteria 8495
73 Ga0207660_10006767 3300025917 Bacteria 7422
74 Ga0207646_10011179 3300025922 Bacteria 8715
75 Ga0207711_10016407 3300025941 Bacteria 6157
76 Ga0207641_10011228 3300026088 Bacteria 7348
77 Ga0207641_10117492 3300026088 Bacteria 2368
78 Ga0207676_10010925 3300026095 Bacteria 6478
79 Ga0207674_10000802 3300026116 Bacteria 40845
80 Ga0268266_10017578 3300028379 Bacteria 6100
81 Ga0268264_10001170 3300028381 Bacteria 25490
82 Ga0307408_100010222 3300031548 Bacteria 6192
83 Ga0307408_100023873 3300031548 Bacteria 4169
84 Ga0316575_10016531 3300031665 Bacteria 2795
85 Ga0316578_10004378 3300031728 Bacteria 6660
86 Ga0307405_10009743 3300031731 Bacteria 4940
87 Ga0307413_10004361 3300031824 Bacteria 6146
88 Ga0307413_10038153 3300031824 Bacteria 2782
89 Ga0307410_10000387 3300031852 Bacteria 17314
90 Ga0307410_10027499 3300031852 Bacteria 3596
91 Ga0307410_10040919 3300031852 Bacteria 3053
92 Ga0307406_10002766 3300031901 Bacteria 9574
93 Ga0307406_10021803 3300031901 Bacteria 3794
94 Ga0307406_10055055 3300031901 Bacteria 2541
95 Ga0307409_100001140 3300031995 Bacteria 12624
96 Ga0307409_100013441 3300031995 Bacteria 5270
97 Ga0307409_100016921 3300031995 Bacteria 4843
98 Ga0307409_100036113 3300031995 Bacteria 3628
99 Ga0307416_100003333 3300032002 Bacteria 9394
100 Ga0307416_100005247 3300032002 Bacteria 7926
101 Ga0307416_100046679 3300032002 Bacteria 3421
102 Ga0307416_100084917 3300032002 Bacteria 2692
103 Ga0307416_100086216 3300032002 Bacteria 2676
104 Ga0307416_100087361 3300032002 Bacteria 2661
105 Ga0307414_10002476 3300032004 Bacteria 9678
106 Ga0307415_100000565 3300032126 Bacteria 16225
107 Ga0307415_100004669 3300032126 Bacteria 7162
108 Ga0307415_100044430 3300032126 Bacteria 2970
109 Ga0307415_100051619 3300032126 Bacteria 2792
110 Ga0316582_0007535 3300036647 Bacteria 5799
111 Ga0451577_0005343 3300042876 Bacteria 13193
112 Ga0495582_0003590 3300046473 Bacteria 8745
113 Ga0495664_0002976 3300046477 Bacteria 9154
114 Ga0495594_0012113 3300046499 Bacteria 4490
115 Ga0495594_0012339 3300046499 Bacteria 4451
116 Ga0495618_0002602 3300046514 Bacteria 11565
117 Ga0495630_0039794 3300046517 Bacteria 3514
118 Ga0495666_0001423 3300046526 Bacteria 11604
119 Ga0495586_0013232 3300046535 Bacteria 4374
120 Ga0495634_0020182 3300046642 Bacteria 4727
121 Ga0495659_0006110 3300046664 Bacteria 3807
122 Ga0495647_0001418 3300046681 Bacteria 7404
123 Ga0495658_0005377 3300046683 Bacteria 6296
124 Ga0496103_0002776 3300048906 Bacteria 10896
125 Ga0496104_0010345 3300048907 Bacteria 8332
126 Ga0496104_0019514 3300048907 Bacteria 6205
127 Ga0496104_0019587 3300048907 Bacteria 6194
128 Ga0496108_0000356 3300048911 Bacteria 38683
129 Ga0496108_0048172 3300048911 Bacteria 3563
130 Ga0496109_0003596 3300048912 Bacteria 12943
131 Ga0496109_0003686 3300048912 Bacteria 12803
132 Ga0496109_0009208 3300048912 Bacteria 8411
133 Ga0496110_0002714 3300048913 Bacteria 13377
134 Ga0496110_0008743 3300048913 Bacteria 8156
135 Ga0496110_0127393 3300048913 Bacteria 2297
136 Ga0496111_0007072 3300048914 Bacteria 7334
137 Ga0496111_0035578 3300048914 Bacteria 3560
138 Ga0496112_0018078 3300048915 Bacteria 6633
139 Ga0496113_0000582 3300048916 Bacteria 18169
140 Ga0496113_0001879 3300048916 Bacteria 11973
141 Ga0496113_0009486 3300048916 Bacteria 6385
142 Ga0496113_0026592 3300048916 Bacteria 4139
143 Ga0496114_0070823 3300048917 Bacteria 2930
144 Ga0501033_0056677 3300049570 Bacteria 2896
145 Ga0501036_0041570 3300049572 Bacteria 3889
146 Ga0501040_0010174 3300049576 Bacteria 6150
147 Ga0501047_0096581 3300049581 Bacteria 2834
148 Ga0501068_0001530 3300049584 Bacteria 12288
149 Ga0501068_0050120 3300049584 Bacteria 2523
150 Ga0501069_0002857 3300049585 Bacteria 8849
151 Ga0501069_0009555 3300049585 Bacteria 5120
152 Ga0501070_0061755 3300049586 Bacteria 3104
153 Ga0501071_0000356 3300049587 Bacteria 22412
154 Ga0501072_0002252 3300049588 Bacteria 14410
155 Ga0501072_0031151 3300049588 Bacteria 4173
156 Ga0501073_0007472 3300049589 Bacteria 8123
157 Ga0501073_0022022 3300049589 Bacteria 4592
158 Ga0501074_0000230 3300049590 Bacteria 31160
159 Ga0501076_0004350 3300049592 Bacteria 10054
160 Ga0501077_0001789 3300049593 Bacteria 12990
161 Ga0501079_0013133 3300049741 Bacteria 6313
162 Ga0501079_0047750 3300049741 Bacteria 3303
163 Ga0501080_0002876 3300049742 Bacteria 15141
164 Ga0501080_0005247 3300049742 Bacteria 11543
165 Ga0501080_0045292 3300049742 Bacteria 4095
166 Ga0501080_0105828 3300049742 Bacteria 2608
167 Ga0501081_0005194 3300049743 Bacteria 8383
168 Ga0501081_0006382 3300049743 Bacteria 7650
169 Ga0501083_0011870 3300049744 Bacteria 6105
170 Ga0501083_0017194 3300049744 Bacteria 5044
171 nmdc:mga05p37_17036_c1 3300050507 Bacteria 8764
172 nmdc:mga05p37_6583_c1 3300050507 Bacteria 13696
173 nmdc:mga09592_461_c1 3300050508 Bacteria 30383
174 nmdc:mga06r32_18911_c1 3300050510 Bacteria 6316
175 nmdc:mga0n895_5827_c1 3300050512 Bacteria 10355
176 nmdc:mga0a205_129126_c1 3300050515 Bacteria 2428
177 nmdc:mga0a205_50583_c1 3300050515 Bacteria 4012
178 nmdc:mga0a205_87181_c1 3300050515 Bacteria 3016
179 Ga0501084_0000498 3300054114 Bacteria 30065
180 Ga0501084_0012217 3300054114 Bacteria 7107
181 Ga0501084_0029427 3300054114 Bacteria 4594
182 Ga0501084_0105501 3300054114 Bacteria 2367
183 Ga0590071_002044 3300059421 Bacteria 5160
184 Ga0590077_003299 3300059426 Bacteria 3358
185 Ga0501082_0068148 3300060353 Bacteria 3064

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300048917 Ga0496114_0070823 Ga0496114_0070823_1194_2915 557
2 3300048913 Ga0496110_0127393 Ga0496110_0127393_37_1803 573
3 3300014325 Ga0163163_10048842 Ga0163163_100488423 583
4 3300005937 Ga0081455_10031690 Ga0081455_100316902 640
5 3300046664 Ga0495659_0006110 Ga0495659_0006110_1443_3548 651
6 3300026088 Ga0207641_10117492 Ga0207641_101174921 661
7 3300049581 Ga0501047_0096581 Ga0501047_0096581_288_2426 661
8 3300049584 Ga0501068_0050120 Ga0501068_0050120_255_2393 661
9 3300049586 Ga0501070_0061755 Ga0501070_0061755_794_2932 661
10 3300049588 Ga0501072_0002252 Ga0501072_0002252_12122_14260 661
11 3300049589 Ga0501073_0022022 Ga0501073_0022022_675_2813 661
12 3300049741 Ga0501079_0013133 Ga0501079_0013133_2069_4207 661
13 3300054114 Ga0501084_0029427 Ga0501084_0029427_1936_4074 661
14 3300009177 Ga0105248_10012883 Ga0105248_100128835 668
15 3300005548 Ga0070665_100034011 Ga0070665_1000340112 677
16 3300025941 Ga0207711_10016407 Ga0207711_100164075 677
17 3300028379 Ga0268266_10017578 Ga0268266_100175784 677
18 3300005445 Ga0070708_100003342 Ga0070708_1000033425 678
19 3300005467 Ga0070706_100018829 Ga0070706_1000188291 678
20 3300005468 Ga0070707_100001461 Ga0070707_1000014616 678
21 3300005518 Ga0070699_100002689 Ga0070699_1000026894 678
22 3300025910 Ga0207684_10016327 Ga0207684_100163272 678
23 3300005467 Ga0070706_100009444 Ga0070706_1000094442 679
24 3300005471 Ga0070698_100000315 Ga0070698_10000031532 679
25 3300005518 Ga0070699_100010355 Ga0070699_1000103553 679
26 3300049585 Ga0501069_0009555 Ga0501069_0009555_1633_3768 680
27 3300005577 Ga0068857_100013663 Ga0068857_1000136633 681
28 3300005618 Ga0068864_100004008 Ga0068864_1000040089 681
29 3300011119 Ga0105246_10011034 Ga0105246_100110344 681
30 3300013308 Ga0157375_10023870 Ga0157375_100238702 681
31 3300025908 Ga0207643_10003069 Ga0207643_100030694 681
32 3300026095 Ga0207676_10010925 Ga0207676_100109254 681
33 3300031665 Ga0316575_10016531 Ga0316575_100165312 682
34 3300031728 Ga0316578_10004378 Ga0316578_100043784 682
35 3300036647 Ga0316582_0007535 Ga0316582_0007535_1747_3882 682
36 3300042876 Ga0451577_0005343 Ga0451577_0005343_8604_10742 682
37 3300005843 Ga0068860_100001521 Ga0068860_1000015218 683
38 3300028381 Ga0268264_10001170 Ga0268264_100011709 683
39 3300046499 Ga0495594_0012113 Ga0495594_0012113_1952_4081 683
40 3300005336 Ga0070680_100104909 Ga0070680_1001049091 684
41 3300005530 Ga0070679_100006118 Ga0070679_1000061182 684
42 3300005546 Ga0070696_100056687 Ga0070696_1000566872 686
43 3300005617 Ga0068859_100026324 Ga0068859_1000263244 686
44 3300005841 Ga0068863_100006295 Ga0068863_1000062951 686
45 3300006844 Ga0075428_100064569 Ga0075428_1000645692 686
46 3300006931 Ga0097620_100026323 Ga0097620_1000263234 686
47 3300009147 Ga0114129_10018169 Ga0114129_100181694 686
48 3300014325 Ga0163163_10014982 Ga0163163_100149822 686
49 3300005439 Ga0070711_100001175 Ga0070711_1000011758 687
50 3300005468 Ga0070707_100005620 Ga0070707_1000056204 687
51 3300005549 Ga0070704_100001105 Ga0070704_1000011053 687
52 3300005617 Ga0068859_100074877 Ga0068859_1000748772 687
53 3300006931 Ga0097620_100074877 Ga0097620_1000748772 687
54 3300025922 Ga0207646_10011179 Ga0207646_100111794 687
55 3300005518 Ga0070699_100000959 Ga0070699_1000009597 688
56 3300005355 Ga0070671_100004680 Ga0070671_1000046802 689
57 3300006880 Ga0075429_100056663 Ga0075429_1000566632 689
58 3300009987 Ga0105030_101016 Ga0105030_1010162 690
59 3300014325 Ga0163163_10155846 Ga0163163_101558462 690
60 3300006844 Ga0075428_100006694 Ga0075428_1000066945 691
61 3300006880 Ga0075429_100001714 Ga0075429_1000017142 691
62 3300009147 Ga0114129_10058498 Ga0114129_100584982 691
63 3300013306 Ga0163162_10067461 Ga0163162_100674612 691
64 3300026116 Ga0207674_10000802 Ga0207674_1000080233 691
65 3300031548 Ga0307408_100010222 Ga0307408_1000102222 691
66 3300031824 Ga0307413_10004361 Ga0307413_100043613 691
67 3300031852 Ga0307410_10000387 Ga0307410_1000038711 691
68 3300031995 Ga0307409_100001140 Ga0307409_1000011404 691
69 3300032002 Ga0307416_100005247 Ga0307416_1000052474 691
70 3300032002 Ga0307416_100086216 Ga0307416_1000862161 691
71 3300032004 Ga0307414_10002476 Ga0307414_100024766 691
72 3300032126 Ga0307415_100000565 Ga0307415_10000056511 691
73 3300032126 Ga0307415_100004669 Ga0307415_1000046692 691
74 3300049744 Ga0501083_0017194 Ga0501083_0017194_1269_3407 691
75 3300050507 nmdc:mga05p37_6583_c1 nmdc:mga05p37_6583_c1_10654_12774 691
76 3300050508 nmdc:mga09592_461_c1 nmdc:mga09592_461_c1_13059_15176 691
77 3300005841 Ga0068863_100020357 Ga0068863_1000203573 692
78 3300026088 Ga0207641_10011228 Ga0207641_100112283 692
79 3300032126 Ga0307415_100051619 Ga0307415_1000516192 692
80 3300048907 Ga0496104_0019514 Ga0496104_0019514_1750_3879 692
81 3300048911 Ga0496108_0000356 Ga0496108_0000356_15717_17846 692
82 3300048912 Ga0496109_0003686 Ga0496109_0003686_1554_3683 692
83 3300048912 Ga0496109_0009208 Ga0496109_0009208_6093_8222 692
84 3300048913 Ga0496110_0002714 Ga0496110_0002714_7812_9941 692
85 3300048914 Ga0496111_0035578 Ga0496111_0035578_817_2946 692
86 3300048916 Ga0496113_0000582 Ga0496113_0000582_15742_17871 692
87 3300050515 nmdc:mga0a205_87181_c1 nmdc:mga0a205_87181_c1_577_2706 692
88 3300005336 Ga0070680_100065753 Ga0070680_1000657531 693
89 3300005366 Ga0070659_100019590 Ga0070659_1000195903 693
90 3300006847 Ga0075431_100004819 Ga0075431_1000048192 693
91 3300009094 Ga0111539_10046589 Ga0111539_100465893 693
92 3300031548 Ga0307408_100023873 Ga0307408_1000238731 693
93 3300032002 Ga0307416_100046679 Ga0307416_1000466791 693
94 3300032002 Ga0307416_100084917 Ga0307416_1000849172 693
95 3300032126 Ga0307415_100044430 Ga0307415_1000444302 693
96 3300050510 nmdc:mga06r32_18911_c1 nmdc:mga06r32_18911_c1_2889_5015 693
97 3300006844 Ga0075428_100040089 Ga0075428_1000400893 694
98 3300006847 Ga0075431_100044592 Ga0075431_1000445923 694
99 3300006871 Ga0075434_100026308 Ga0075434_1000263083 694
100 3300009147 Ga0114129_10000384 Ga0114129_1000038436 694
101 3300048907 Ga0496104_0010345 Ga0496104_0010345_4181_6307 694
102 3300048913 Ga0496110_0008743 Ga0496110_0008743_4705_6831 694
103 3300048916 Ga0496113_0009486 Ga0496113_0009486_885_3011 694
104 3300049576 Ga0501040_0010174 Ga0501040_0010174_1711_3840 694
105 3300049592 Ga0501076_0004350 Ga0501076_0004350_6022_8151 694
106 3300049741 Ga0501079_0047750 Ga0501079_0047750_42_2171 694
107 3300049742 Ga0501080_0005247 Ga0501080_0005247_9387_11513 694
108 3300049742 Ga0501080_0105828 Ga0501080_0105828_62_2191 694
109 3300049743 Ga0501081_0006382 Ga0501081_0006382_2413_4542 694
110 3300050507 nmdc:mga05p37_17036_c1 nmdc:mga05p37_17036_c1_1633_3765 694
111 3300050512 nmdc:mga0n895_5827_c1 nmdc:mga0n895_5827_c1_3809_5941 694
112 3300050515 nmdc:mga0a205_50583_c1 nmdc:mga0a205_50583_c1_1670_3802 694
113 3300054114 Ga0501084_0012217 Ga0501084_0012217_1995_4124 694
114 3300054114 Ga0501084_0105501 Ga0501084_0105501_78_2204 694
115 3300060353 Ga0501082_0068148 Ga0501082_0068148_82_2211 694
116 3300005336 Ga0070680_100010631 Ga0070680_1000106312 695
117 3300005347 Ga0070668_100007948 Ga0070668_1000079484 695
118 3300005471 Ga0070698_100004916 Ga0070698_1000049164 695
119 3300005518 Ga0070699_100003283 Ga0070699_1000032839 695
120 3300005518 Ga0070699_100011940 Ga0070699_1000119404 695
121 3300005530 Ga0070679_100081738 Ga0070679_1000817382 695
122 3300005536 Ga0070697_100005794 Ga0070697_1000057945 695
123 3300005543 Ga0070672_100020123 Ga0070672_1000201232 695
124 3300005546 Ga0070696_100010082 Ga0070696_1000100824 695
125 3300007076 Ga0075435_100033123 Ga0075435_1000331232 695
126 3300009147 Ga0114129_10038706 Ga0114129_100387063 695
127 3300009147 Ga0114129_10056822 Ga0114129_100568223 695
128 3300009177 Ga0105248_10015364 Ga0105248_100153644 695
129 3300009177 Ga0105248_10048660 Ga0105248_100486604 695
130 3300010375 Ga0105239_10021895 Ga0105239_100218954 695
131 3300014968 Ga0157379_10069024 Ga0157379_100690242 695
132 3300025910 Ga0207684_10063461 Ga0207684_100634611 695
133 3300025912 Ga0207707_10009370 Ga0207707_100093703 695
134 3300025917 Ga0207660_10006767 Ga0207660_100067672 695
135 3300031824 Ga0307413_10038153 Ga0307413_100381532 695
136 3300031852 Ga0307410_10040919 Ga0307410_100409192 695
137 3300031901 Ga0307406_10021803 Ga0307406_100218032 695
138 3300046473 Ga0495582_0003590 Ga0495582_0003590_6304_8436 695
139 3300046477 Ga0495664_0002976 Ga0495664_0002976_1242_3374 695
140 3300046499 Ga0495594_0012339 Ga0495594_0012339_495_2627 695
141 3300046514 Ga0495618_0002602 Ga0495618_0002602_1585_3717 695
142 3300046517 Ga0495630_0039794 Ga0495630_0039794_163_2295 695
143 3300046526 Ga0495666_0001423 Ga0495666_0001423_7890_10022 695
144 3300046535 Ga0495586_0013232 Ga0495586_0013232_1747_3879 695
145 3300046642 Ga0495634_0020182 Ga0495634_0020182_1311_3443 695
146 3300046681 Ga0495647_0001418 Ga0495647_0001418_3939_6071 695
147 3300046683 Ga0495658_0005377 Ga0495658_0005377_981_3113 695
148 3300048906 Ga0496103_0002776 Ga0496103_0002776_8544_10676 695
149 3300048907 Ga0496104_0019587 Ga0496104_0019587_3639_5771 695
150 3300048911 Ga0496108_0048172 Ga0496108_0048172_321_2450 695
151 3300048912 Ga0496109_0003596 Ga0496109_0003596_245_2377 695
152 3300048914 Ga0496111_0007072 Ga0496111_0007072_579_2711 695
153 3300048915 Ga0496112_0018078 Ga0496112_0018078_4335_6467 695
154 3300048916 Ga0496113_0001879 Ga0496113_0001879_9429_11561 695
155 3300048916 Ga0496113_0026592 Ga0496113_0026592_1749_3878 695
156 3300049570 Ga0501033_0056677 Ga0501033_0056677_657_2786 695
157 3300049572 Ga0501036_0041570 Ga0501036_0041570_1311_3440 695
158 3300049584 Ga0501068_0001530 Ga0501068_0001530_1224_3362 695
159 3300049585 Ga0501069_0002857 Ga0501069_0002857_1040_3178 695
160 3300049587 Ga0501071_0000356 Ga0501071_0000356_11149_13287 695
161 3300049588 Ga0501072_0031151 Ga0501072_0031151_120_2258 695
162 3300049589 Ga0501073_0007472 Ga0501073_0007472_4946_7084 695
163 3300049590 Ga0501074_0000230 Ga0501074_0000230_14180_16318 695
164 3300049593 Ga0501077_0001789 Ga0501077_0001789_6200_8329 695
165 3300049742 Ga0501080_0002876 Ga0501080_0002876_1040_3178 695
166 3300049742 Ga0501080_0045292 Ga0501080_0045292_1867_3996 695
167 3300049743 Ga0501081_0005194 Ga0501081_0005194_1441_3570 695
168 3300049744 Ga0501083_0011870 Ga0501083_0011870_349_2487 695
169 3300050515 nmdc:mga0a205_129126_c1 nmdc:mga0a205_129126_c1_120_2252 695
170 3300054114 Ga0501084_0000498 Ga0501084_0000498_10359_12497 695
171 3300059421 Ga0590071_002044 Ga0590071_002044_1390_3519 695
172 3300059426 Ga0590077_003299 Ga0590077_003299_1213_3342 695
173 3300031852 Ga0307410_10027499 Ga0307410_100274992 696
174 3300005440 Ga0070705_100019551 Ga0070705_1000195512 700
175 3300005549 Ga0070704_100014409 Ga0070704_1000144092 700
176 3300031901 Ga0307406_10002766 Ga0307406_100027662 701
177 3300031901 Ga0307406_10055055 Ga0307406_100550552 701
178 3300031995 Ga0307409_100036113 Ga0307409_1000361132 701
179 3300031731 Ga0307405_10009743 Ga0307405_100097432 704
180 3300031995 Ga0307409_100013441 Ga0307409_1000134413 704
181 3300031995 Ga0307409_100016921 Ga0307409_1000169213 704
182 3300032002 Ga0307416_100003333 Ga0307416_1000033338 704
183 3300032002 Ga0307416_100087361 Ga0307416_1000873611 704
184 3300005336 Ga0070680_100006364 Ga0070680_1000063646 707
185 3300005549 Ga0070704_100003803 Ga0070704_1000038036 707

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00725

3HCDH

3-hydroxyacyl-CoA dehydrogenase, C-terminal domain

520

613

0.97

PF02737

3HCDH_N

3-hydroxyacyl-CoA dehydrogenase, NAD binding domain

355

518

0.97

PF00378

ECH_1

Enoyl-CoA hydratase/isomerase

45

280

0.95

PF16113

ECH_2

Enoyl-CoA hydratase/isomerase

50

247

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
6ysw-assembly1.cif.gz_B e. coli anaerobic trifunctional enzyme subunit-alpha in complex with coenzyme a 0.9436 13 707
6ysw-assembly2.cif.gz_A e. coli anaerobic trifunctional enzyme subunit-alpha in complex with coenzyme a 0.9411 13 706
6dv2-assembly1.cif.gz_H crystal structure of human mitochondrial trifunctional protein 0.9382 12 707
6ysw-assembly1.cif.gz_B e. coli anaerobic trifunctional enzyme subunit-alpha in complex with coenzyme a 0.9356 13 707
6dv2-assembly3.cif.gz_L crystal structure of human mitochondrial trifunctional protein 0.931 12 707
ID Description Score Start End Superfamily
af_P77399_3_303_3.90.226.10 Alpha Beta;Alpha-Beta Complex;2-enoyl-CoA Hydratase; Chain A, domain 1;2-enoyl-CoA Hydratase; Chain A, domain 1 0.9692 11 313 3.90.226.10
af_P77399_3_303_3.90.226.10 Alpha Beta;Alpha-Beta Complex;2-enoyl-CoA Hydratase; Chain A, domain 1;2-enoyl-CoA Hydratase; Chain A, domain 1 0.9566 11 313 3.90.226.10
3rsiB02 Alpha Beta;Alpha-Beta Complex;2-enoyl-CoA Hydratase; Chain A, domain 1; 0.9559 107 211 3.90.226.20
1zcjA04 Mainly Alpha;Orthogonal Bundle;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.9556 613 702 1.10.1040.10
af_Q9V397_48_369_3.90.226.10 Alpha Beta;Alpha-Beta Complex;2-enoyl-CoA Hydratase; Chain A, domain 1;2-enoyl-CoA Hydratase; Chain A, domain 1 0.9543 12 314 3.90.226.10
ID Description Score Start End GO Terms
AF-A0A7S2HKU4-F1-model_v4 3-hydroxyacyl-CoA dehydrogenase NAD binding domain-containing protein 0.9832 399 501 GO:0006635
GO:0016829
GO:0016853
GO:0070403
AF-A0A2V7KCB6-F1-model_v4 Fatty acid oxidation complex subunit alpha FadJ (EC 1.1.1.35, EC 4.2.1.17, EC 5.1.2.3) 0.9788 1 346 GO:0004300
GO:0006635
GO:0008692
GO:0016509
AF-A0A432Q3N3-F1-model_v4 3-hydroxyacyl-CoA dehydrogenase 0.9739 393 707 GO:0004300
GO:0006635
GO:0016509
GO:0070403
AF-A0A0R3QIZ5-F1-model_v4 Enoyl-CoA hydratase 0.9732 43 210 GO:0006635
AF-A0A2V9NB94-F1-model_v4 Enoyl-CoA hydratase 0.9722 13 210 GO:0006635

Feature Viewer

pLDDT pTM Quality
88.46 0.86 High
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Predicted Structure (AlphaFold2)

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