F284139
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 185 | 142 | 145 | 772 |
Family's Representative Sequence
| Representative Sequence | 3300006175|Ga0070712_100048463|Ga0070712_1000484631 |
| Length | 825 |
| Sequence | MTREPGDLPRHITSPGGWPVGRTFAAMDESPLRDGRAAGCCLAIHWLEAAAMTVTVATLGFPRIGPRRELKTALESYWSGKSDQVALLAVAADLRSKTWALQRDLGADIIPANDFSLYDHVLDTTAMVGAIPPAYGWSRGEVGLETYFAMARGAQGEAAPEGCAHGHAHDGDGVPAAEMTKWFDTNYHYLVPEFTADQLFRLASTKAVQEYREAKAQGIETRPVLLGPVSYLLLGKTRGADFEPLSLLPRLLPVYAETLKLLSEAGASWVQIDEPCLVLDLSDTARAAFGDAYAALTSGARSPKIMLATYFGSLADNLPTALALPVHGLHVDLVRAPEQLDAVLAAARADLVLSLGVIDGRNVWAADLNAILDRIEPVVASGRDVVIAPSCSLLHTPIDLGRETDLDPEVRSWLSFAVQKVAELVVLARGLNKGRDNVRASLDAASTVIASRRTSPRINNPAVKTRIAASDPSLSRRISGFETRRQVQRGKLKLPPYPTTTIGSFPQTPEVRKARADYGKKLINGAAYEAFLREETARAVRWQEEVGLDVLVHGEFERNDMVQYFGEQLSGFAFTKHAWVQSYGSRCVRPPIIYGDVSRPKPMTVEWWRYAQSLTERPMKGMLTGPVTILNWSFVRDDQPRSTTCRQVAFAIRDEVLDLERAGAAMIQIDEPALREGLPLRQDEWQTYLNWAVECFRITSSGVGDATQIHTHMCYSEFNDIIASIAAMDADVISIETARSQMELLDAFAGFRYPAEIGPGVYDIHSPRVPAVDEMALLLKAAAKRLPADQLWVNPDCGLKTRKWPEVRLAVENMVAAAQAVRAYA |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2558860280 | Kutzneria sp. 744 | Isolate | Unclassified |
| 2 | 2582581279 | Caulobacter henricii OK261 | Isolate | Rhizosphere |
| 3 | 2599185353 | Staphylococcus sp. NFPP34 | Isolate | Rhizoplane |
| 4 | 2600254943 | Staphylococcus pasteuri NFIX07 | Isolate | Rhizoplane |
| 5 | 2600255318 | Pseudomonas putida NFIX47 | Isolate | Rhizoplane |
| 6 | 2603880185 | Pseudomonas sp. NFIX46 | Isolate | Rhizoplane |
| 7 | 2603880199 | Pseudomonas sp. NFIX49 | Isolate | Rhizoplane |
| 8 | 2643221583 | Caulobacter sp. Root655 | Isolate | Unclassified |
| 9 | 2643221628 | Variovorax sp. Root318D1 | Isolate | Unclassified |
| 10 | 2808606373 | Pseudomonas sp. SLBN-2 | Isolate | Unclassified |
| 11 | 2818991446 | Variovorax sp. 1180 | Isolate | Unclassified |
| 12 | 2831265667 | Variovorax guangxiensis DSM 27352 | Isolate | Rhizosphere |
| 13 | 2838054893 | Variovorax guangxiensis 34/80 | Isolate | Nodule |
| 14 | 2842677519 | Variovorax sp. R-72495 | Isolate | Unclassified |
| 15 | 2849560528 | Caulobacter zeae 410 | Isolate | Unclassified |
| 16 | 2851153111 | Caulobacter radicis 736 | Isolate | Unclassified |
| 17 | 2878029506 | Pseudomonas fluorescens DR397 | Isolate | Rhizosphere |
| 18 | 2891048133 | Martelella lutilitoris GH2-6 | Isolate | Rhizosphere |
| 19 | 2896109856 | Chitinophaga sp. SYP-B3965 | Isolate | Rhizosphere |
| 20 | 2899924645 | Variovorax sp. 369 | Isolate | Unclassified |
| 21 | 2904449895 | Variovorax sp. 1763 | Isolate | Rhizosphere |
| 22 | 2904456579 | Variovorax sp. 2002 | Isolate | Unclassified |
| 23 | 2919462493 | Variovorax sp. 3319 | Isolate | Rhizosphere |
| 24 | 2928037797 | Variovorax sp. 1126 | Isolate | Unclassified |
| 25 | 2928044640 | Variovorax sp. 1128 | Isolate | Unclassified |
| 26 | 2928051484 | Variovorax sp. 1133 | Isolate | Unclassified |
| 27 | 2928064002 | Variovorax sp. 1140 | Isolate | Rhizosphere |
| 28 | 2929199973 | Roseomonas sp. R-73070 Hybrid assembly | Isolate | Unclassified |
| 29 | 2929520902 | Variovorax beijingensis 502 | Isolate | Unclassified |
| 30 | 2945909444 | Variovorax sp. CRF3-Va-1 W1I1 | Isolate | Rhizosphere |
| 31 | 2945945610 | Variovorax paradoxus W1I18 | Isolate | Rhizosphere |
| 32 | 2945972063 | Variovorax paradoxus W2I8 | Isolate | Rhizosphere |
| 33 | 2945984333 | Variovorax sp. W2I14 | Isolate | Rhizosphere |
| 34 | 2954767861 | Variovorax sp. TBS-050B | Isolate | Rhizosphere |
| 35 | 2990196909 | Pseudomonas mangrovi TC-11 | Isolate | Unclassified |
| 36 | 3300002737 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA | Metagenome | Endosphere |
| 37 | 3300003187 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB | Metagenome | Endosphere |
| 38 | 3300003354 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS | Metagenome | Endosphere |
| 39 | 3300003374 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF | Metagenome | Endosphere |
| 40 | 3300003773 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 | Metagenome | Endosphere |
| 41 | 3300003784 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 | Metagenome | Endosphere |
| 42 | 3300003790 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 | Metagenome | Endosphere |
| 43 | 3300003792 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 | Metagenome | Endosphere |
| 44 | 3300003794 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 | Metagenome | Endosphere |
| 45 | 3300005262 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) | Metagenome | Endosphere |
| 46 | 3300005288 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) | Metagenome | Rhizosphere |
| 47 | 3300005354 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG | Metagenome | Rhizosphere |
| 48 | 3300005445 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG | Metagenome | Rhizosphere |
| 49 | 3300005467 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG | Metagenome | Rhizosphere |
| 50 | 3300005536 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG | Metagenome | Rhizosphere |
| 51 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 52 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 53 | 3300006038 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 | Metagenome | Endosphere |
| 54 | 3300006051 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 | Metagenome | Endosphere |
| 55 | 3300006175 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG | Metagenome | Rhizosphere |
| 56 | 3300006177 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 | Metagenome | Endosphere |
| 57 | 3300006186 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 | Metagenome | Endosphere |
| 58 | 3300006353 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 | Metagenome | Endosphere |
| 59 | 3300006948 | Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 | Metagenome | Nodule |
| 60 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 61 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 62 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 63 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 64 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 65 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 66 | 3300014497 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG | Metagenome | Rhizosphere |
| 67 | 3300015684 | Plant tissue microbial consortia from sugarcane, Campinas, Sao Paulo, Brazil - 002.2_F02 | Metagenome | Unclassified |
| 68 | 3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Metagenome | Rhizosphere |
| 69 | 3300021388 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 | Metagenome | Unclassified |
| 70 | 3300025208 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) | Metagenome | Endosphere |
| 71 | 3300025233 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) | Metagenome | Endosphere |
| 72 | 3300025245 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) | Metagenome | Endosphere |
| 73 | 3300025258 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) | Metagenome | Endosphere |
| 74 | 3300025263 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 75 | 3300025273 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 76 | 3300025284 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) | Metagenome | Endosphere |
| 77 | 3300025291 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 78 | 3300025292 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 79 | 3300025294 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) | Metagenome | Endosphere |
| 80 | 3300025295 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 81 | 3300025297 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) | Metagenome | Endosphere |
| 82 | 3300025298 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 83 | 3300025299 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 84 | 3300025302 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) | Metagenome | Endosphere |
| 85 | 3300025303 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 86 | 3300025304 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 87 | 3300025910 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 88 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 89 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 90 | 3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 91 | 3300025927 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 92 | 3300025940 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 93 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 94 | 3300027666 | Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) | Metagenome | Nodule |
| 95 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 96 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 97 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 98 | 3300031456 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM | Metagenome | Unclassified |
| 99 | 3300031548 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 | Metagenome | Rhizosphere |
| 100 | 3300031901 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 | Metagenome | Rhizosphere |
| 101 | 3300031911 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 | Metagenome | Rhizosphere |
| 102 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 103 | 3300032004 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 | Metagenome | Rhizosphere |
| 104 | 3300032005 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 | Metagenome | Rhizosphere |
| 105 | 3300033180 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM | Metagenome | Unclassified |
| 106 | 3300037853 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 | Metagenome | Unclassified |
| 107 | 3300039437 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 | Metagenome | Unclassified |
| 108 | 3300041505 | White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_9 MetaG | Metagenome | Unclassified |
| 109 | 3300042156 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 | Metagenome | Rhizosphere |
| 110 | 3300044901 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R | Metagenome | Rhizosphere |
| 111 | 3300046457 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere | Metagenome | Rhizosphere |
| 112 | 3300046501 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere | Metagenome | Rhizosphere |
| 113 | 3300046507 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere | Metagenome | Rhizosphere |
| 114 | 3300046513 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere | Metagenome | Rhizosphere |
| 115 | 3300046558 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere | Metagenome | Rhizosphere |
| 116 | 3300046616 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere | Metagenome | Rhizosphere |
| 117 | 3300046660 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere | Metagenome | Rhizosphere |
| 118 | 3300047323 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere | Metagenome | Rhizosphere |
| 119 | 3300047472 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere | Metagenome | Rhizosphere |
| 120 | 3300048918 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 | Metagenome | Rhizoplane |
| 121 | 3300049570 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 122 | 3300049574 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 123 | 3300049578 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 124 | 3300049584 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 | Metagenome | Rhizosphere |
| 125 | 3300049591 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 | Metagenome | Rhizosphere |
| 126 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 127 | 3300050491 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation | Metagenome | Endosphere |
| 128 | 3300050492 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation | Metagenome | Endosphere |
| 129 | 3300050493 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation | Metagenome | Endosphere |
| 130 | 3300053079 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere | Metagenome | Endosphere |
| 131 | 3300053119 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere | Metagenome | Endosphere |
| 132 | 3300053121 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere | Metagenome | Endosphere |
| 133 | 3300053122 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere | Metagenome | Endosphere |
| 134 | 3300053131 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere | Metagenome | Endosphere |
| 135 | 3300053136 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere | Metagenome | Endosphere |
| 136 | 3300053156 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere | Metagenome | Endosphere |
| 137 | 3300053177 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere | Metagenome | Endosphere |
| 138 | 640427133 | Stutzerimonas stutzeri A1501 | Isolate | Rhizosphere |
| 139 | 641228493 | Gluconacetobacter diazotrophicus PA1 5 | Isolate | Unclassified |
| 140 | 643348555 | Gluconacetobacter diazotrophicus PA1 5 | Isolate | Unclassified |
| 141 | 651053060 | Stutzerimonas stutzeri CMT.A.9 | Isolate | Rhizosphere |
| 142 | 8055909800 | Plastoroseomonas hellenica LMG 31523 | Isolate | Unclassified |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 78.38 |
| Metatranscriptomes | 0 |
| Isolates | 21.62 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 40 |
| Nodule | 1.62 |
| Rhizoplane | 3.24 |
| Rhizosphere | 40 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 15.14 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | JGI25162J39368_1000110 | 3300002737 | Bacteria | 89871 |
| 2 | JGI25151J46595_10000490 | 3300003187 | Bacteria | 37505 |
| 3 | JGI25160J50197_1002481 | 3300003354 | Bacteria | 8565 |
| 4 | JGI25161J50226_1001358 | 3300003374 | Bacteria | 7527 |
| 5 | Ga0055537_1000168 | 3300003773 | Bacteria | 48729 |
| 6 | Ga0055534_1000024 | 3300003784 | Bacteria | 131674 |
| 7 | Ga0055528_1000348 | 3300003790 | Bacteria | 38126 |
| 8 | Ga0055540_1000408 | 3300003792 | Bacteria | 34822 |
| 9 | Ga0055531_10001976 | 3300003794 | Bacteria | 14301 |
| 10 | Ga0055531_10004896 | 3300003794 | Bacteria | 7973 |
| 11 | Ga0065165_1001071 | 3300005262 | Bacteria | 32650 |
| 12 | Ga0065165_1002437 | 3300005262 | Bacteria | 15751 |
| 13 | Ga0065714_10068724 | 3300005288 | Bacteria | 4525 |
| 14 | Ga0070675_100064474 | 3300005354 | Bacteria | 3029 |
| 15 | Ga0070708_100006232 | 3300005445 | Bacteria | 9480 |
| 16 | Ga0070706_100006629 | 3300005467 | Bacteria | 10921 |
| 17 | Ga0070697_100010589 | 3300005536 | Bacteria | 7199 |
| 18 | Ga0070665_100000147 | 3300005548 | Bacteria | 129683 |
| 19 | Ga0068855_100029814 | 3300005563 | Bacteria | 6524 |
| 20 | Ga0075365_10000302 | 3300006038 | Bacteria | 17227 |
| 21 | Ga0075364_10003442 | 3300006051 | Bacteria | 9002 |
| 22 | Ga0070712_100048463 | 3300006175 | Bacteria | 2945 |
| 23 | Ga0075362_10002124 | 3300006177 | Bacteria | 6548 |
| 24 | Ga0075369_10016659 | 3300006186 | Bacteria | 2969 |
| 25 | Ga0075370_10011237 | 3300006353 | Bacteria | 4699 |
| 26 | Ga0099826_10000132 | 3300006948 | Bacteria | 31946 |
| 27 | Ga0105245_10000721 | 3300009098 | Bacteria | 29771 |
| 28 | Ga0105237_10000228 | 3300009545 | Bacteria | 79622 |
| 29 | Ga0105237_10000996 | 3300009545 | Bacteria | 38129 |
| 30 | Ga0105239_10004850 | 3300010375 | Bacteria | 15914 |
| 31 | Ga0105239_10126335 | 3300010375 | Bacteria | 2842 |
| 32 | Ga0157370_10000372 | 3300013104 | Bacteria | 56499 |
| 33 | Ga0157369_10014496 | 3300013105 | Bacteria | 8895 |
| 34 | Ga0163162_10001087 | 3300013306 | Bacteria | 25189 |
| 35 | Ga0182008_10021395 | 3300014497 | Bacteria | 3320 |
| 36 | Ga0183365_10001 | 3300015684 | Bacteria | 2090444 |
| 37 | Ga0163161_10000060 | 3300017792 | Bacteria | 112916 |
| 38 | Ga0213875_10002484 | 3300021388 | Bacteria | 11008 |
| 39 | Ga0209436_101334 | 3300025208 | Bacteria | 8739 |
| 40 | Ga0209437_100077 | 3300025233 | Bacteria | 286656 |
| 41 | Ga0207425_1000180 | 3300025245 | Bacteria | 52117 |
| 42 | Ga0209129_1000111 | 3300025258 | Bacteria | 148853 |
| 43 | Ga0209129_1000366 | 3300025258 | Bacteria | 36901 |
| 44 | Ga0209565_1000040 | 3300025263 | Bacteria | 266543 |
| 45 | Ga0209565_1000110 | 3300025263 | Bacteria | 119879 |
| 46 | Ga0209673_1000109 | 3300025273 | Bacteria | 183000 |
| 47 | Ga0209673_1000175 | 3300025273 | Bacteria | 131239 |
| 48 | Ga0209673_1000944 | 3300025273 | Bacteria | 36333 |
| 49 | Ga0209673_1000992 | 3300025273 | Bacteria | 34667 |
| 50 | Ga0209673_1001347 | 3300025273 | Bacteria | 24544 |
| 51 | Ga0209130_1000205 | 3300025284 | Bacteria | 79260 |
| 52 | Ga0209130_1000332 | 3300025284 | Bacteria | 54263 |
| 53 | Ga0209675_1000024 | 3300025291 | Bacteria | 312615 |
| 54 | Ga0209675_1000192 | 3300025291 | Bacteria | 66905 |
| 55 | Ga0209676_1000005 | 3300025292 | Bacteria | 1076001 |
| 56 | Ga0209676_1000038 | 3300025292 | Bacteria | 449305 |
| 57 | Ga0209025_1000116 | 3300025294 | Bacteria | 218293 |
| 58 | Ga0209025_1000493 | 3300025294 | Bacteria | 75884 |
| 59 | Ga0209025_1003978 | 3300025294 | Bacteria | 13266 |
| 60 | Ga0209025_1015069 | 3300025294 | Bacteria | 4693 |
| 61 | Ga0209564_1000155 | 3300025295 | Bacteria | 165859 |
| 62 | Ga0209564_1000298 | 3300025295 | Bacteria | 99805 |
| 63 | Ga0209564_1007702 | 3300025295 | Bacteria | 5490 |
| 64 | Ga0209758_1000107 | 3300025297 | Bacteria | 218293 |
| 65 | Ga0209758_1000261 | 3300025297 | Bacteria | 104423 |
| 66 | Ga0209758_1002637 | 3300025297 | Bacteria | 17799 |
| 67 | Ga0209758_1016014 | 3300025297 | Bacteria | 3834 |
| 68 | Ga0209050_1000007 | 3300025298 | Bacteria | 1187891 |
| 69 | Ga0209050_1000029 | 3300025298 | Bacteria | 465801 |
| 70 | Ga0209050_1006500 | 3300025298 | Bacteria | 6895 |
| 71 | Ga0209256_1000038 | 3300025299 | Bacteria | 375225 |
| 72 | Ga0209256_1000087 | 3300025299 | Bacteria | 218290 |
| 73 | Ga0207426_1000090 | 3300025302 | Bacteria | 280662 |
| 74 | Ga0207426_1000123 | 3300025302 | Bacteria | 218290 |
| 75 | Ga0209051_1000009 | 3300025303 | Bacteria | 706778 |
| 76 | Ga0209051_1000092 | 3300025303 | Bacteria | 170056 |
| 77 | Ga0209257_1000011 | 3300025304 | Bacteria | 1112630 |
| 78 | Ga0209257_1000036 | 3300025304 | Bacteria | 616006 |
| 79 | Ga0209257_1000060 | 3300025304 | Bacteria | 372267 |
| 80 | Ga0209257_1000152 | 3300025304 | Bacteria | 189432 |
| 81 | Ga0209257_1000576 | 3300025304 | Bacteria | 61751 |
| 82 | Ga0209257_1000870 | 3300025304 | Bacteria | 42856 |
| 83 | Ga0207684_10013425 | 3300025910 | Bacteria | 7087 |
| 84 | Ga0207695_10002019 | 3300025913 | Bacteria | 31240 |
| 85 | Ga0207695_10008280 | 3300025913 | Bacteria | 13043 |
| 86 | Ga0207671_10001312 | 3300025914 | Bacteria | 29145 |
| 87 | Ga0207671_10006387 | 3300025914 | Bacteria | 10508 |
| 88 | Ga0207671_10058618 | 3300025914 | Bacteria | 2855 |
| 89 | Ga0207694_10018830 | 3300025924 | Bacteria | 5218 |
| 90 | Ga0207687_10000467 | 3300025927 | Bacteria | 27625 |
| 91 | Ga0207691_10002766 | 3300025940 | Bacteria | 17098 |
| 92 | Ga0207667_10024732 | 3300025949 | Bacteria | 6586 |
| 93 | Ga0207667_10116515 | 3300025949 | Bacteria | 2753 |
| 94 | Ga0209282_1000127 | 3300027666 | Bacteria | 48767 |
| 95 | Ga0268266_10000603 | 3300028379 | Bacteria | 49111 |
| 96 | Ga0268264_10000484 | 3300028381 | Bacteria | 52947 |
| 97 | Ga0307515_10056803 | 3300028794 | Bacteria | 5679 |
| 98 | Ga0307513_10095519 | 3300031456 | Bacteria | 3013 |
| 99 | Ga0307408_100000195 | 3300031548 | Bacteria | 65727 |
| 100 | Ga0307408_100009161 | 3300031548 | Bacteria | 6525 |
| 101 | Ga0307408_100011094 | 3300031548 | Bacteria | 5951 |
| 102 | Ga0307408_100063842 | 3300031548 | Bacteria | 2695 |
| 103 | Ga0307406_10001953 | 3300031901 | Bacteria | 11263 |
| 104 | Ga0307412_10003261 | 3300031911 | Bacteria | 9011 |
| 105 | Ga0307416_100025653 | 3300032002 | Bacteria | 4326 |
| 106 | Ga0307414_10022471 | 3300032004 | Bacteria | 3979 |
| 107 | Ga0307411_10033652 | 3300032005 | Bacteria | 3181 |
| 108 | Ga0307510_10005458 | 3300033180 | Bacteria | 15148 |
| 109 | Ga0436364_0279754 | 3300037853 | Bacteria | 6859 |
| 110 | Ga0436364_0305473 | 3300037853 | Bacteria | 5564 |
| 111 | Ga0436365_0864627 | 3300039437 | Bacteria | 5383 |
| 112 | Ga0451849_0613887 | 3300041505 | Bacteria | 2586 |
| 113 | Ga0439446_0000255 | 3300042156 | Bacteria | 9904 |
| 114 | Ga0466960_0004223 | 3300044901 | Bacteria | 5589 |
| 115 | Ga0495590_0000850 | 3300046457 | Bacteria | 13815 |
| 116 | Ga0495607_0000100 | 3300046501 | Bacteria | 91570 |
| 117 | Ga0495606_0021898 | 3300046507 | Bacteria | 4674 |
| 118 | Ga0495606_0054949 | 3300046507 | Bacteria | 2577 |
| 119 | Ga0495616_0000222 | 3300046513 | Bacteria | 46999 |
| 120 | Ga0495633_0002895 | 3300046558 | Bacteria | 11769 |
| 121 | Ga0495668_0000061 | 3300046616 | Bacteria | 192499 |
| 122 | Ga0495625_0000624 | 3300046660 | Bacteria | 51214 |
| 123 | Ga0495625_0002470 | 3300046660 | Bacteria | 19971 |
| 124 | Ga0495683_0003175 | 3300047323 | Bacteria | 9604 |
| 125 | Ga0495686_0000434 | 3300047472 | Bacteria | 64552 |
| 126 | Ga0496115_0001362 | 3300048918 | Bacteria | 17441 |
| 127 | Ga0501033_0017257 | 3300049570 | Bacteria | 5454 |
| 128 | Ga0501038_0057958 | 3300049574 | Bacteria | 3323 |
| 129 | Ga0501042_0020300 | 3300049578 | Bacteria | 4623 |
| 130 | Ga0501068_0022212 | 3300049584 | Bacteria | 3708 |
| 131 | Ga0501075_0025164 | 3300049591 | Bacteria | 4373 |
| 132 | Ga0501044_0004771 | 3300049823 | Bacteria | 15164 |
| 133 | nmdc:mga00v17_1317_c1 | 3300050491 | Bacteria | 13006 |
| 134 | nmdc:mga0yw44_665_c1 | 3300050492 | Bacteria | 12536 |
| 135 | nmdc:mga0k408_1540_c1 | 3300050493 | Bacteria | 12454 |
| 136 | Ga0500610_0000289 | 3300053079 | Bacteria | 15137 |
| 137 | Ga0500595_002674 | 3300053119 | Bacteria | 8663 |
| 138 | Ga0500607_001987 | 3300053121 | Bacteria | 17343 |
| 139 | Ga0500608_000010 | 3300053122 | Bacteria | 94344 |
| 140 | Ga0500608_000747 | 3300053122 | Bacteria | 11885 |
| 141 | Ga0500652_000014 | 3300053131 | Bacteria | 147740 |
| 142 | Ga0500559_0000010 | 3300053136 | Bacteria | 165569 |
| 143 | Ga0500559_0003304 | 3300053136 | Bacteria | 8000 |
| 144 | Ga0500622_0000843 | 3300053156 | Bacteria | 26239 |
| 145 | Ga0500636_0006100 | 3300053177 | Bacteria | 6917 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300053136 | Ga0500559_0003304 | Ga0500559_0003304_6046_7983 | 641 |
| 2 | 3300049584 | Ga0501068_0022212 | Ga0501068_0022212_1618_3651 | 658 |
| 3 | 3300025297 | Ga0209758_1000261 | Ga0209758_100026184 | 717 |
| 4 | 3300048918 | Ga0496115_0001362 | Ga0496115_0001362_7021_9312 | 717 |
| 5 | 3300025297 | Ga0209758_1002637 | Ga0209758_100263711 | 725 |
| 6 | 3300049574 | Ga0501038_0057958 | Ga0501038_0057958_713_2911 | 726 |
| 7 | 3300049578 | Ga0501042_0020300 | Ga0501042_0020300_1462_3660 | 726 |
| 8 | 3300049591 | Ga0501075_0025164 | Ga0501075_0025164_1033_3231 | 726 |
| 9 | 3300003794 | Ga0055531_10004896 | Ga0055531_100048962 | 728 |
| 10 | 3300025304 | Ga0209257_1000036 | Ga0209257_1000036269 | 728 |
| 11 | 3300005262 | Ga0065165_1002437 | Ga0065165_10024372 | 734 |
| 12 | 3300025295 | Ga0209564_1007702 | Ga0209564_10077021 | 734 |
| 13 | 3300053177 | Ga0500636_0006100 | Ga0500636_0006100_2090_4435 | 734 |
| 14 | 3300046501 | Ga0495607_0000100 | Ga0495607_0000100_18164_20455 | 735 |
| 15 | iso_pu_bacteria | 2599185353 | 2600199169 | 738 |
| 16 | iso_pu_bacteria | 2600254943 | 2600402484 | 738 |
| 17 | 3300042156 | Ga0439446_0000255 | Ga0439446_0000255_2244_4580 | 741 |
| 18 | 3300005262 | Ga0065165_1001071 | Ga0065165_100107115 | 743 |
| 19 | 3300031548 | Ga0307408_100000195 | Ga0307408_1000001954 | 745 |
| 20 | iso_pu_bacteria | 2558860280 | 2559424792 | 745 |
| 21 | 3300025949 | Ga0207667_10116515 | Ga0207667_101165151 | 746 |
| 22 | iso_pu_bacteria | 2600255318 | 2601796820 | 748 |
| 23 | iso_pu_bacteria | 2603880185 | 2606073970 | 748 |
| 24 | iso_pu_bacteria | 2603880199 | 2606126385 | 748 |
| 25 | iso_pu_bacteria | 2878029506 | 2878034446 | 748 |
| 26 | iso_pu_bacteria | 640427133 | 640488794 | 748 |
| 27 | iso_pu_bacteria | 651053060 | 651176859 | 748 |
| 28 | 3300041505 | Ga0451849_0613887 | Ga0451849_0613887_90_2429 | 750 |
| 29 | 3300044901 | Ga0466960_0004223 | Ga0466960_0004223_3288_5564 | 751 |
| 30 | 3300046513 | Ga0495616_0000222 | Ga0495616_0000222_42859_45198 | 751 |
| 31 | 3300047323 | Ga0495683_0003175 | Ga0495683_0003175_1795_4104 | 751 |
| 32 | iso_pu_bacteria | 2808606373 | 2808907333 | 751 |
| 33 | 3300009098 | Ga0105245_10000721 | Ga0105245_100007219 | 752 |
| 34 | 3300025927 | Ga0207687_10000467 | Ga0207687_100004678 | 752 |
| 35 | 3300037853 | Ga0436364_0305473 | Ga0436364_0305473_736_3021 | 752 |
| 36 | 3300039437 | Ga0436365_0864627 | Ga0436365_0864627_1830_4115 | 752 |
| 37 | 3300046660 | Ga0495625_0002470 | Ga0495625_0002470_8025_10361 | 752 |
| 38 | 3300015684 | Ga0183365_10001 | Ga0183365_100011387 | 753 |
| 39 | 3300046558 | Ga0495633_0002895 | Ga0495633_0002895_4631_6955 | 753 |
| 40 | 3300046616 | Ga0495668_0000061 | Ga0495668_0000061_184919_187303 | 753 |
| 41 | iso_pu_bacteria | 2891048133 | 2891050032 | 753 |
| 42 | 3300003794 | Ga0055531_10001976 | Ga0055531_100019766 | 754 |
| 43 | 3300025298 | Ga0209050_1000029 | Ga0209050_1000029237 | 754 |
| 44 | 3300025304 | Ga0209257_1000152 | Ga0209257_100015279 | 754 |
| 45 | 3300031456 | Ga0307513_10095519 | Ga0307513_100955192 | 754 |
| 46 | iso_pu_bacteria | 2582581279 | 2585149296 | 754 |
| 47 | iso_pu_bacteria | 2929199973 | 2929205820 | 754 |
| 48 | 3300005354 | Ga0070675_100064474 | Ga0070675_1000644742 | 755 |
| 49 | 3300006175 | Ga0070712_100048463 | Ga0070712_1000484631 | 755 |
| 50 | 3300021388 | Ga0213875_10002484 | Ga0213875_100024844 | 755 |
| 51 | 3300025940 | Ga0207691_10002766 | Ga0207691_100027665 | 755 |
| 52 | 3300032004 | Ga0307414_10022471 | Ga0307414_100224713 | 755 |
| 53 | 3300032005 | Ga0307411_10033652 | Ga0307411_100336522 | 755 |
| 54 | 3300037853 | Ga0436364_0279754 | Ga0436364_0279754_1633_3957 | 755 |
| 55 | 3300053122 | Ga0500608_000010 | Ga0500608_000010_88427_90748 | 755 |
| 56 | iso_pu_bacteria | 2643221628 | 2644162977 | 755 |
| 57 | iso_pu_bacteria | 2818991446 | 2819596197 | 755 |
| 58 | iso_pu_bacteria | 2831265667 | 2831270460 | 755 |
| 59 | iso_pu_bacteria | 2838054893 | 2838056688 | 755 |
| 60 | iso_pu_bacteria | 2842677519 | 2842681508 | 755 |
| 61 | iso_pu_bacteria | 2899924645 | 2899925578 | 755 |
| 62 | iso_pu_bacteria | 2904449895 | 2904454661 | 755 |
| 63 | iso_pu_bacteria | 2904456579 | 2904460416 | 755 |
| 64 | iso_pu_bacteria | 2919462493 | 2919464221 | 755 |
| 65 | iso_pu_bacteria | 2928037797 | 2928038327 | 755 |
| 66 | iso_pu_bacteria | 2928044640 | 2928046068 | 755 |
| 67 | iso_pu_bacteria | 2928051484 | 2928053767 | 755 |
| 68 | iso_pu_bacteria | 2928064002 | 2928067310 | 755 |
| 69 | iso_pu_bacteria | 2929520902 | 2929524619 | 755 |
| 70 | iso_pu_bacteria | 2945909444 | 2945912822 | 755 |
| 71 | iso_pu_bacteria | 2945945610 | 2945947041 | 755 |
| 72 | iso_pu_bacteria | 2945972063 | 2945976727 | 755 |
| 73 | iso_pu_bacteria | 2945984333 | 2945984912 | 755 |
| 74 | iso_pu_bacteria | 2954767861 | 2954771776 | 755 |
| 75 | iso_pu_bacteria | 2990196909 | 2990198113 | 755 |
| 76 | 3300005288 | Ga0065714_10068724 | Ga0065714_100687243 | 756 |
| 77 | 3300009545 | Ga0105237_10000228 | Ga0105237_1000022866 | 756 |
| 78 | 3300025914 | Ga0207671_10001312 | Ga0207671_1000131217 | 756 |
| 79 | iso_pu_bacteria | 2849560528 | 2849562044 | 756 |
| 80 | 3300003187 | JGI25151J46595_10000490 | JGI25151J46595_1000049020 | 757 |
| 81 | 3300003354 | JGI25160J50197_1002481 | JGI25160J50197_10024815 | 757 |
| 82 | 3300003374 | JGI25161J50226_1001358 | JGI25161J50226_10013582 | 757 |
| 83 | 3300003773 | Ga0055537_1000168 | Ga0055537_10001685 | 757 |
| 84 | 3300003784 | Ga0055534_1000024 | Ga0055534_100002485 | 757 |
| 85 | 3300003790 | Ga0055528_1000348 | Ga0055528_100034830 | 757 |
| 86 | 3300003792 | Ga0055540_1000408 | Ga0055540_100040831 | 757 |
| 87 | 3300006177 | Ga0075362_10002124 | Ga0075362_100021246 | 757 |
| 88 | 3300006186 | Ga0075369_10016659 | Ga0075369_100166591 | 757 |
| 89 | 3300006353 | Ga0075370_10011237 | Ga0075370_100112373 | 757 |
| 90 | 3300006948 | Ga0099826_10000132 | Ga0099826_1000013219 | 757 |
| 91 | 3300013104 | Ga0157370_10000372 | Ga0157370_1000037213 | 757 |
| 92 | 3300014497 | Ga0182008_10021395 | Ga0182008_100213952 | 757 |
| 93 | 3300017792 | Ga0163161_10000060 | Ga0163161_1000006077 | 757 |
| 94 | 3300025208 | Ga0209436_101334 | Ga0209436_1013346 | 757 |
| 95 | 3300025245 | Ga0207425_1000180 | Ga0207425_100018047 | 757 |
| 96 | 3300025258 | Ga0209129_1000111 | Ga0209129_1000111110 | 757 |
| 97 | 3300025258 | Ga0209129_1000366 | Ga0209129_100036620 | 757 |
| 98 | 3300025263 | Ga0209565_1000040 | Ga0209565_100004055 | 757 |
| 99 | 3300025263 | Ga0209565_1000110 | Ga0209565_100011022 | 757 |
| 100 | 3300025273 | Ga0209673_1000109 | Ga0209673_1000109108 | 757 |
| 101 | 3300025273 | Ga0209673_1000175 | Ga0209673_100017558 | 757 |
| 102 | 3300025273 | Ga0209673_1000944 | Ga0209673_100094410 | 757 |
| 103 | 3300025273 | Ga0209673_1000992 | Ga0209673_100099229 | 757 |
| 104 | 3300025273 | Ga0209673_1001347 | Ga0209673_100134716 | 757 |
| 105 | 3300025284 | Ga0209130_1000205 | Ga0209130_100020522 | 757 |
| 106 | 3300025284 | Ga0209130_1000332 | Ga0209130_100033233 | 757 |
| 107 | 3300025291 | Ga0209675_1000024 | Ga0209675_1000024213 | 757 |
| 108 | 3300025291 | Ga0209675_1000192 | Ga0209675_10001928 | 757 |
| 109 | 3300025292 | Ga0209676_1000005 | Ga0209676_1000005297 | 757 |
| 110 | 3300025294 | Ga0209025_1000116 | Ga0209025_1000116118 | 757 |
| 111 | 3300025294 | Ga0209025_1000493 | Ga0209025_100049337 | 757 |
| 112 | 3300025294 | Ga0209025_1003978 | Ga0209025_10039783 | 757 |
| 113 | 3300025294 | Ga0209025_1015069 | Ga0209025_10150692 | 757 |
| 114 | 3300025295 | Ga0209564_1000155 | Ga0209564_1000155118 | 757 |
| 115 | 3300025295 | Ga0209564_1000298 | Ga0209564_100029852 | 757 |
| 116 | 3300025297 | Ga0209758_1000107 | Ga0209758_1000107118 | 757 |
| 117 | 3300025297 | Ga0209758_1016014 | Ga0209758_10160142 | 757 |
| 118 | 3300025298 | Ga0209050_1000007 | Ga0209050_1000007800 | 757 |
| 119 | 3300025299 | Ga0209256_1000038 | Ga0209256_1000038159 | 757 |
| 120 | 3300025299 | Ga0209256_1000087 | Ga0209256_1000087118 | 757 |
| 121 | 3300025302 | Ga0207426_1000090 | Ga0207426_1000090110 | 757 |
| 122 | 3300025302 | Ga0207426_1000123 | Ga0207426_1000123118 | 757 |
| 123 | 3300025303 | Ga0209051_1000009 | Ga0209051_1000009297 | 757 |
| 124 | 3300025303 | Ga0209051_1000092 | Ga0209051_100009244 | 757 |
| 125 | 3300025304 | Ga0209257_1000011 | Ga0209257_1000011271 | 757 |
| 126 | 3300025304 | Ga0209257_1000576 | Ga0209257_100057639 | 757 |
| 127 | 3300025304 | Ga0209257_1000870 | Ga0209257_100087034 | 757 |
| 128 | 3300027666 | Ga0209282_1000127 | Ga0209282_100012735 | 757 |
| 129 | 3300031548 | Ga0307408_100009161 | Ga0307408_1000091612 | 757 |
| 130 | 3300031901 | Ga0307406_10001953 | Ga0307406_100019534 | 757 |
| 131 | 3300032002 | Ga0307416_100025653 | Ga0307416_1000256533 | 757 |
| 132 | 3300046660 | Ga0495625_0000624 | Ga0495625_0000624_29791_32145 | 757 |
| 133 | 3300053079 | Ga0500610_0000289 | Ga0500610_0000289_7516_9870 | 757 |
| 134 | 3300053121 | Ga0500607_001987 | Ga0500607_001987_3421_5766 | 757 |
| 135 | iso_pu_bacteria | 8055909800 | 8055916547 | 757 |
| 136 | 3300013105 | Ga0157369_10014496 | Ga0157369_100144965 | 758 |
| 137 | 3300025292 | Ga0209676_1000038 | Ga0209676_1000038300 | 758 |
| 138 | 3300025298 | Ga0209050_1006500 | Ga0209050_10065002 | 758 |
| 139 | 3300025304 | Ga0209257_1000060 | Ga0209257_100006020 | 758 |
| 140 | iso_pu_bacteria | 2851153111 | 2851156235 | 758 |
| 141 | iso_pu_bacteria | 641228493 | 641336525 | 758 |
| 142 | iso_pu_bacteria | 643348555 | 643390336 | 758 |
| 143 | 3300046507 | Ga0495606_0054949 | Ga0495606_0054949_150_2483 | 759 |
| 144 | 3300047472 | Ga0495686_0000434 | Ga0495686_0000434_3893_6238 | 759 |
| 145 | 3300053136 | Ga0500559_0000010 | Ga0500559_0000010_86521_88884 | 759 |
| 146 | 3300006038 | Ga0075365_10000302 | Ga0075365_100003027 | 760 |
| 147 | 3300006051 | Ga0075364_10003442 | Ga0075364_100034428 | 760 |
| 148 | 3300046457 | Ga0495590_0000850 | Ga0495590_0000850_7571_9919 | 760 |
| 149 | 3300049570 | Ga0501033_0017257 | Ga0501033_0017257_2859_5195 | 760 |
| 150 | 3300049823 | Ga0501044_0004771 | Ga0501044_0004771_6998_9334 | 760 |
| 151 | 3300050491 | nmdc:mga00v17_1317_c1 | nmdc:mga00v17_1317_c1_4313_6712 | 760 |
| 152 | 3300050492 | nmdc:mga0yw44_665_c1 | nmdc:mga0yw44_665_c1_6505_8904 | 760 |
| 153 | 3300050493 | nmdc:mga0k408_1540_c1 | nmdc:mga0k408_1540_c1_7217_9616 | 760 |
| 154 | 3300053119 | Ga0500595_002674 | Ga0500595_002674_5154_7496 | 760 |
| 155 | 3300053131 | Ga0500652_000014 | Ga0500652_000014_11513_13855 | 760 |
| 156 | 3300053156 | Ga0500622_0000843 | Ga0500622_0000843_11827_14175 | 760 |
| 157 | iso_pu_bacteria | 2643221583 | 2643924785 | 761 |
| 158 | 3300005445 | Ga0070708_100006232 | Ga0070708_1000062326 | 762 |
| 159 | 3300005467 | Ga0070706_100006629 | Ga0070706_1000066296 | 762 |
| 160 | 3300005536 | Ga0070697_100010589 | Ga0070697_1000105892 | 762 |
| 161 | 3300025910 | Ga0207684_10013425 | Ga0207684_100134255 | 762 |
| 162 | 3300028794 | Ga0307515_10056803 | Ga0307515_100568032 | 762 |
| 163 | 3300010375 | Ga0105239_10126335 | Ga0105239_101263351 | 764 |
| 164 | 3300025913 | Ga0207695_10002019 | Ga0207695_100020194 | 764 |
| 165 | 3300025914 | Ga0207671_10058618 | Ga0207671_100586181 | 764 |
| 166 | 3300025924 | Ga0207694_10018830 | Ga0207694_100188302 | 764 |
| 167 | 3300028381 | Ga0268264_10000484 | Ga0268264_1000048418 | 764 |
| 168 | iso_pu_bacteria | 2896109856 | 2896114230 | 764 |
| 169 | 3300031548 | Ga0307408_100011094 | Ga0307408_1000110942 | 766 |
| 170 | 3300031548 | Ga0307408_100063842 | Ga0307408_1000638421 | 766 |
| 171 | 3300031911 | Ga0307412_10003261 | Ga0307412_100032617 | 766 |
| 172 | 3300002737 | JGI25162J39368_1000110 | JGI25162J39368_100011088 | 768 |
| 173 | 3300005548 | Ga0070665_100000147 | Ga0070665_10000014721 | 768 |
| 174 | 3300005563 | Ga0068855_100029814 | Ga0068855_1000298143 | 768 |
| 175 | 3300009545 | Ga0105237_10000996 | Ga0105237_1000099613 | 768 |
| 176 | 3300010375 | Ga0105239_10004850 | Ga0105239_100048501 | 768 |
| 177 | 3300013306 | Ga0163162_10001087 | Ga0163162_1000108715 | 768 |
| 178 | 3300025233 | Ga0209437_100077 | Ga0209437_100077143 | 768 |
| 179 | 3300025913 | Ga0207695_10008280 | Ga0207695_100082806 | 768 |
| 180 | 3300025914 | Ga0207671_10006387 | Ga0207671_100063874 | 768 |
| 181 | 3300025949 | Ga0207667_10024732 | Ga0207667_100247324 | 768 |
| 182 | 3300028379 | Ga0268266_10000603 | Ga0268266_1000060322 | 768 |
| 183 | 3300033180 | Ga0307510_10005458 | Ga0307510_1000545811 | 768 |
| 184 | 3300046507 | Ga0495606_0021898 | Ga0495606_0021898_1679_4012 | 768 |
| 185 | 3300053122 | Ga0500608_000747 | Ga0500608_000747_8837_11170 | 768 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 4qqu-assembly1.cif.gz_A | crystal structure of the cobalamin-independent methionine synthase enzyme in a closed conformation | 0.9625 | 1 | 760 |
| 4qqu-assembly1.cif.gz_A | crystal structure of the cobalamin-independent methionine synthase enzyme in a closed conformation | 0.9538 | 1 | 760 |
| 4l5z-assembly1.cif.gz_A | crystal structure of the candida albicans methionine synthase in complex with homocysteine | 0.9259 | 1 | 760 |
| 4l5z-assembly1.cif.gz_A | crystal structure of the candida albicans methionine synthase in complex with homocysteine | 0.9224 | 1 | 760 |
| 1xr2-assembly1.cif.gz_A | crystal structure of oxidized t. maritima cobalamin-independent methionine synthase complexed with methyltetrahydrofolate | 0.9206 | 2 | 758 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_K7MME4_84_171_3.20.20.210 | Alpha Beta;Alpha-Beta Barrel;TIM Barrel; | 0.9568 | 675 | 760 | 3.20.20.210 |
| af_P05694_1_396_3.20.20.210 | Alpha Beta;Alpha-Beta Barrel;TIM Barrel; | 0.9564 | 1 | 390 | 3.20.20.210 |
| 1xdjA02 | Alpha Beta;Alpha-Beta Barrel;TIM Barrel; | 0.9549 | 397 | 762 | 3.20.20.210 |
| af_K7KK03_1_110_3.20.20.210 | Alpha Beta;Alpha-Beta Barrel;TIM Barrel; | 0.9541 | 650 | 761 | 3.20.20.210 |
| 4l61A02 | Alpha Beta;Alpha-Beta Barrel;TIM Barrel; | 0.9541 | 392 | 760 | 3.20.20.210 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A519V2I2-F1-model_v4 | 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase | 0.9941 | 1 | 269 |
GO:0003871
GO:0008270 GO:0008652 GO:0032259 |
| AF-A0A3B9IT70-F1-model_v4 | 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase | 0.9932 | 646 | 762 |
GO:0003871
GO:0008270 GO:0009086 GO:0032259 |
| AF-S7VK19-F1-model_v4 | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) | 0.9914 | 217 | 360 |
GO:0003871
GO:0008270 GO:0008652 GO:0032259 |
| AF-A0A6P0XWS1-F1-model_v4 | 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase | 0.991 | 645 | 760 |
GO:0003871
GO:0008270 GO:0009086 GO:0032259 |
| AF-A0A2T2U635-F1-model_v4 | 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase | 0.991 | 663 | 759 |
GO:0003871
GO:0008270 GO:0009086 GO:0032259 |
Predicted Structure (AlphaFold2)
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