F283135

General Info

Members Datasets Scaffolds Average Seq Length
184 150 368 837

Family's Representative Sequence

Representative Sequence 3300046522|Ga0495643_0010772|Ga0495643_0010772_1819_4719
Length 966
Sequence MESRDSIADIWGERTPYAGVDRWPARVDQRTSEEPDHWVQSACVLCSNGCGCDIGVKDGRIVGVRGRAQDVVNRGRLGPKGLHGWEANNSPDRLIHPMIRRNGKLARATWDEAMGLIVERTQQIKREYSAGALGFYTSGQLFIEEYYTLGMIGKAGLGTPHMDGNTRLCTATAAAALKESFGCDGQPGSYFDVDATDCILMVGHNMSSTDTVLWMRVLDRRRDANAPKLIVIDPRRTMTAREADLHLAPKIGTNVALLNGLLHLLIAGGHVDRAFVDAHTMGFDELAQLVADYPPERVEEITGVAAADLRRAADMIGGSTMLLSTCLQGVYQSNQATAAAVQVNNINLILGRIGRPGCGILQMNGQPTAQNTRETGADGDLPGFRNWNNMDHIEDLARIWNVEPDTIPHWTPPTHAMQIFRYCETGSIRMLWIQATNPAVSLPNLNRVRKILQKPDLFVVVQDAFLTETAQMADVVLPAALWGEKTGTFTNVDRTVHISHKAVEPPGEARSDFDIFVDFARRMDFRDKDGAPLIKWNTPEEAFEGWKACTRGRPCDYTGMSYEKLSQGSGIAWPCSEAHPEGEHYPYKDLVFPTHAEYCESYGHDLITGAPVPAQAYKANDPAGRAVLKGAGYMAPFEEPDADYPLFLTTGRLVYHFHTRTKTGRAPALAAAAPDDFVQMAREDAGRLGVADGDWIRVTSRRGSAEARARIGDIGPGEVFVPFHFGYWDEPGRARAANELTIYEWDPVSKQPHYKYAAVRIEKIAAPSTPQPERMDPGAPGVADPASTQTGIVHALKEAKDVLVEGWEKAKPVRAHVADYLGLLQASERRLVKAFEQTRATHPDEPDIGPLCHVFAQWSGASADALEPFVQQYGERREGEPERLDDALLVQRRQGGFDMLRDLHDLWLLVNESMISLDILEQAARSLHDKAFEAAIKQIRHQNSRQLDWLHGRIRQAAPQTLVVPS

Samples

Sample ID Description Type Environment
1 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
2 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
3 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
4 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
5 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
6 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
7 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
8 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
9 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
10 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
11 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
12 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
13 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
14 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
15 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
16 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
17 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
18 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
19 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
20 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
21 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
22 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
23 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
24 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
25 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
26 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
27 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
28 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
29 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
30 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
31 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
32 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
33 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
34 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
35 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
36 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
37 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
38 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
39 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
40 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
56 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
58 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
59 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
60 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
61 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
62 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
63 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
64 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
65 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
66 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
67 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
68 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
69 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
70 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
71 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
72 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
73 3300042993 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z071817_5372 Metagenome Rhizosphere
74 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
75 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
76 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
77 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
78 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
79 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
80 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
81 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
82 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
83 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
84 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
85 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
86 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
87 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
88 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
89 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
90 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
91 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
92 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
93 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
94 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
95 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
96 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
97 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
98 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
99 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
100 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
101 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
102 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
103 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
104 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
105 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
106 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
107 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
108 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
109 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
110 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
111 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
112 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
113 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
114 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
115 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
116 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
117 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
118 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
119 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
120 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
121 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
122 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
123 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
124 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
125 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
126 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
127 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
128 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
129 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
130 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
131 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
132 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
133 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
134 2643221572 Leifsonia sp. Root60 Isolate Unclassified
135 2643221587 Streptomyces sp. Root66D1 Isolate Unclassified
136 2643221669 Leifsonia sp. Root1293 Isolate Unclassified
137 2643221677 Streptomyces sp. Root1304 Isolate Unclassified
138 2795385470 Labedaea rhizosphaerae DSM 45361 Isolate Rhizosphere
139 2811994872 Microbacterium sp. MU4Y-5-1 Isolate Unclassified
140 2837268691 Jiangella endophytica KE2-3 Isolate Rhizosphere
141 2867302475 Micromonospora globbae WPS1-2 Isolate Unclassified
142 2868088558 Phytoactinopolyspora endophytica EGI 60009 Isolate Unclassified
143 2884994152 Cellulomonas sp. H30R-01 Isolate Rhizosphere
144 2902799365 Mycolicibacterium sp. P1-5 Isolate Unclassified
145 2917736166 Amycolatopsis dendrobii DR6-1 Isolate Unclassified
146 2919051321 Sinomonas atrocyanea 1003 Isolate Rhizosphere
147 2919055335 Leifsonia sp. 1010 Isolate Rhizosphere
148 2919468124 Streptomyces sp. 3330 Isolate Rhizosphere
149 2966598605 Kitasatospora papulosa SLBN-177 Isolate Rhizosphere
150 8053945823 Actinomadura terrae OS3-83 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 90.76
Metatranscriptomes 0
Isolates 9.24

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 2.17
Rhizosphere 90.76
Stem 0
Stem Tuber 0
Unclassified 1.09

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495643_0010772 3300046522 Bacteria 5612
2 Ga0070676_10003711 3300005328 Bacteria 8002
3 Ga0070680_100030336 3300005336 Unclassified 4344
4 Ga0070687_100000465 3300005343 Bacteria 13618
5 Ga0070668_100003973 3300005347 Bacteria 10940
6 Ga0070669_100006036 3300005353 Bacteria 8741
7 Ga0070675_100001596 3300005354 Bacteria 16732
8 Ga0070667_100001597 3300005367 Bacteria 20271
9 Ga0070663_100000119 3300005455 Bacteria 36922
10 Ga0068867_100002393 3300005459 Bacteria 13194
11 Ga0070679_100003314 3300005530 Bacteria 14753
12 Ga0070672_100001441 3300005543 Bacteria 14708
13 Ga0070686_100031498 3300005544 Bacteria 3243
14 Ga0068859_100029839 3300005617 Bacteria 5471
15 Ga0068866_10002424 3300005718 Bacteria 7696
16 Ga0068861_100002475 3300005719 Bacteria 12038
17 Ga0068858_100001628 3300005842 Bacteria 22898
18 Ga0068860_100010271 3300005843 Bacteria 9267
19 Ga0068862_100016615 3300005844 Bacteria 6127
20 Ga0081539_10001103 3300005985 Bacteria 49011
21 Ga0075432_10000110 3300006058 Bacteria 17806
22 Ga0075428_100024235 3300006844 Bacteria 6713
23 Ga0075433_10003290 3300006852 Bacteria 12482
24 Ga0075434_100000025 3300006871 Bacteria 68254
25 Ga0068865_100000489 3300006881 Bacteria 22220
26 Ga0097620_100029839 3300006931 Bacteria 5471
27 Ga0075435_100000291 3300007076 Bacteria 31134
28 Ga0111539_10000213 3300009094 Bacteria 69372
29 Ga0105243_10003128 3300009148 Bacteria 13600
30 Ga0105242_10013425 3300009176 Bacteria 6331
31 Ga0105248_10001658 3300009177 Bacteria 24784
32 Ga0157371_10009850 3300013102 Bacteria 7488
33 Ga0163162_10007690 3300013306 Bacteria 10497
34 Ga0157372_10018630 3300013307 Bacteria 7467
35 Ga0157372_10029247 3300013307 Bacteria 6014
36 Ga0157375_10000947 3300013308 Bacteria 25144
37 Ga0157375_10037539 3300013308 Bacteria 4643
38 Ga0157380_10000934 3300014326 Bacteria 18442
39 Ga0157379_10006421 3300014968 Bacteria 10127
40 Ga0163161_10001222 3300017792 Bacteria 19284
41 Ga0213875_10006437 3300021388 Bacteria 6166
42 Ga0207680_10006489 3300025903 Bacteria 5659
43 Ga0207647_10015335 3300025904 Bacteria 5257
44 Ga0207645_10001581 3300025907 Bacteria 18578
45 Ga0207660_10022489 3300025917 Unclassified 4248
46 Ga0207662_10001407 3300025918 Bacteria 11646
47 Ga0207652_10003316 3300025921 Bacteria 13331
48 Ga0207652_10013130 3300025921 Bacteria 6705
49 Ga0207659_10027763 3300025926 Bacteria 3837
50 Ga0207706_10001938 3300025933 Bacteria 20310
51 Ga0207691_10000302 3300025940 Bacteria 49063
52 Ga0207668_10003781 3300025972 Bacteria 8916
53 Ga0207703_10008450 3300026035 Bacteria 8136
54 Ga0207678_10000811 3300026067 Bacteria 28653
55 Ga0207648_10005325 3300026089 Bacteria 12972
56 Ga0207675_100008468 3300026118 Bacteria 9688
57 Ga0207698_10002212 3300026142 Bacteria 11490
58 Ga0207428_10000342 3300027907 Bacteria 60624
59 Ga0268264_10016592 3300028381 Bacteria 6030
60 Ga0307515_10023801 3300028794 Bacteria 10708
61 Ga0307408_100016581 3300031548 Bacteria 4920
62 Ga0307410_10003458 3300031852 Bacteria 7921
63 Ga0307410_10003985 3300031852 Bacteria 7538
64 Ga0307406_10000100 3300031901 Bacteria 49406
65 Ga0307409_100000001 3300031995 Bacteria 93927
66 Ga0307409_100044693 3300031995 Bacteria 3338
67 Ga0307416_100000104 3300032002 Bacteria 52068
68 Ga0307411_10008524 3300032005 Bacteria 5321
69 Ga0307415_100004658 3300032126 Bacteria 7169
70 Ga0307415_100008493 3300032126 Bacteria 5698
71 Ga0373947_0016861 3300035725 Bacteria 4196
72 Ga0395899_0002008 3300037312 Bacteria 16754
73 Ga0395899_0016622 3300037312 Bacteria 5613
74 Ga0395900_0013422 3300037418 Bacteria 8370
75 Ga0395898_0018281 3300037466 Bacteria 7147
76 Ga0436364_1025760 3300037853 Bacteria 46353
77 Ga0395901_0001692 3300038443 Bacteria 22752
78 Ga0395901_0035530 3300038443 Bacteria 5149
79 Ga0436365_1020713 3300039437 Bacteria 3247
80 Ga0439464_0000503 3300042439 Bacteria 7968
81 Ga0439440_0000564 3300042993 Bacteria 6288
82 Ga0466972_0004288 3300044658 Bacteria 7122
83 Ga0466972_0004327 3300044658 Bacteria 7093
84 Ga0453683_0000639 3300044673 Bacteria 37874
85 Ga0466965_0000308 3300044683 Bacteria 16336
86 Ga0466963_0001286 3300044694 Bacteria 13319
87 Ga0466964_0002406 3300044706 Bacteria 6652
88 Ga0453684_0042239 3300044712 Bacteria 6150
89 Ga0466971_0002530 3300044719 Bacteria 7727
90 Ga0466968_0003974 3300044735 Bacteria 5492
91 Ga0466968_0014188 3300044735 Bacteria 3146
92 Ga0466970_0007652 3300044765 Bacteria 5416
93 Ga0466970_0008506 3300044765 Bacteria 5168
94 Ga0466957_0001505 3300044842 Bacteria 12230
95 Ga0466957_0002857 3300044842 Bacteria 9349
96 Ga0466960_0003051 3300044901 Bacteria 6403
97 Ga0466960_0007178 3300044901 Bacteria 4509
98 Ga0451576_0000760 3300045051 Bacteria 63689
99 Ga0451576_0008217 3300045051 Bacteria 12279
100 Ga0466958_0009190 3300045836 Bacteria 5498
101 Ga0466967_0001297 3300045976 Bacteria 14253
102 Ga0466967_0011332 3300045976 Bacteria 6745
103 Ga0466967_0018051 3300045976 Bacteria 5626
104 Ga0466967_0021263 3300045976 Bacteria 5264
105 Ga0466967_0022366 3300045976 Bacteria 5156
106 Ga0466967_0023013 3300045976 Bacteria 5098
107 Ga0466967_0027974 3300045976 Bacteria 4699
108 Ga0466967_0052415 3300045976 Bacteria 3581
109 Ga0466967_0052678 3300045976 Bacteria 3573
110 Ga0495590_0013266 3300046457 Bacteria 3035
111 Ga0495629_0018190 3300046459 Bacteria 5034
112 Ga0495638_0035313 3300046460 Bacteria 3188
113 Ga0495582_0001334 3300046473 Bacteria 13842
114 Ga0495662_0001611 3300046476 Bacteria 11219
115 Ga0495585_0000877 3300046492 Bacteria 25614
116 Ga0495607_0030143 3300046501 Bacteria 3333
117 Ga0495630_0008557 3300046517 Bacteria 7342
118 Ga0495648_0006551 3300046524 Bacteria 9479
119 Ga0495668_0000146 3300046616 Bacteria 106276
120 Ga0495668_0025959 3300046616 Bacteria 3326
121 Ga0495611_0002990 3300046648 Bacteria 7534
122 Ga0495613_0005405 3300046689 Bacteria 9596
123 Ga0495649_0000628 3300046694 Bacteria 28848
124 Ga0495676_0012694 3300047321 Bacteria 7576
125 Ga0495687_000007 3300047443 Bacteria 552679
126 Ga0495626_0000555 3300048091 Bacteria 37043
127 Ga0496110_0000007 3300048913 Bacteria 114271
128 Ga0496110_0018950 3300048913 Bacteria 5782
129 Ga0496113_0008503 3300048916 Bacteria 6691
130 Ga0496114_0008690 3300048917 Bacteria 8049
131 Ga0501031_0026921 3300049568 Bacteria 3748
132 Ga0501032_0003710 3300049569 Bacteria 11593
133 Ga0501032_0014540 3300049569 Bacteria 5573
134 Ga0501034_0032068 3300049571 Bacteria 5337
135 Ga0501036_0010374 3300049572 Bacteria 7690
136 Ga0501036_0031223 3300049572 Bacteria 4501
137 Ga0501037_0019503 3300049573 Bacteria 5002
138 Ga0501038_0026012 3300049574 Bacteria 5213
139 Ga0501041_0001131 3300049577 Bacteria 14621
140 Ga0501043_0011533 3300049579 Bacteria 6920
141 Ga0501047_0010353 3300049581 Bacteria 8822
142 Ga0501047_0025026 3300049581 Bacteria 5733
143 Ga0501047_0060736 3300049581 Bacteria 3646
144 Ga0501067_0007652 3300049583 Bacteria 6004
145 Ga0501068_0001847 3300049584 Bacteria 11240
146 Ga0501068_0016615 3300049584 Bacteria 4243
147 Ga0501075_0059163 3300049591 Bacteria 2886
148 Ga0501079_0016900 3300049741 Bacteria 5572
149 Ga0501080_0007765 3300049742 Bacteria 9696
150 Ga0501081_0002250 3300049743 Bacteria 12140
151 Ga0501035_0002870 3300049822 Bacteria 16629
152 Ga0501035_0005292 3300049822 Bacteria 12215
153 Ga0501035_0036315 3300049822 Bacteria 4466
154 Ga0501044_0006767 3300049823 Bacteria 12635
155 Ga0501044_0038283 3300049823 Bacteria 5008
156 nmdc:mga08y16_331_c1 3300050511 Bacteria 42832
157 nmdc:mga0n895_5749_c1 3300050512 Bacteria 10407
158 nmdc:mga0rr50_3664_c1 3300050513 Bacteria 8897
159 nmdc:mga08x19_1988_c1 3300050514 Bacteria 12524
160 nmdc:mga0a205_71_c1 3300050515 Bacteria 55470
161 Ga0495601_0001860 3300053077 Bacteria 11755
162 Ga0495612_0004386 3300053078 Bacteria 5854
163 Ga0501084_0001526 3300054114 Bacteria 18381
164 Ga0501084_0011259 3300054114 Bacteria 7403
165 Ga0466962_0001086 3300061719 Bacteria 12494
166 Ga0466962_0008810 3300061719 Bacteria 4835
167 Ga0530510_0014142 3300061734 Bacteria 5626
168 2643877714 2643221572 Bacteria 3614809
169 2643946280 2643221587 Bacteria 7586415
170 2644384769 2643221669 Bacteria 3611286
171 2644433069 2643221677 Bacteria 7584031
172 2795785031 2795385470 Bacteria 8317180
173 2812321917 2811994872 Bacteria 4121241
174 2837270961 2837268691 Bacteria 7850704
175 2867304111 2867302475 Bacteria 7087181
176 2868092997 2868088558 Bacteria 7609351
177 2884996260 2884994152 Bacteria 4492978
178 2902801766 2902799365 Bacteria 5419524
179 2917742801 2917736166 Bacteria 9690793
180 2919054263 2919051321 Bacteria 4210889
181 2919056072 2919055335 Bacteria 3875751
182 2919475667 2919468124 Bacteria 9133025
183 2966599472 2966598605 Bacteria 7676064
184 8053946003 8053945823 Bacteria 8962862
185 Ga0495643_0010772
186 Ga0070676_10003711
187 Ga0070680_100030336
188 Ga0070687_100000465
189 Ga0070668_100003973
190 Ga0070669_100006036
191 Ga0070675_100001596
192 Ga0070667_100001597
193 Ga0070663_100000119
194 Ga0068867_100002393
195 Ga0070679_100003314
196 Ga0070672_100001441
197 Ga0070686_100031498
198 Ga0068859_100029839
199 Ga0068866_10002424
200 Ga0068861_100002475
201 Ga0068858_100001628
202 Ga0068860_100010271
203 Ga0068862_100016615
204 Ga0081539_10001103
205 Ga0075432_10000110
206 Ga0075428_100024235
207 Ga0075433_10003290
208 Ga0075434_100000025
209 Ga0068865_100000489
210 Ga0097620_100029839
211 Ga0075435_100000291
212 Ga0111539_10000213
213 Ga0105243_10003128
214 Ga0105242_10013425
215 Ga0105248_10001658
216 Ga0157371_10009850
217 Ga0163162_10007690
218 Ga0157372_10018630
219 Ga0157372_10029247
220 Ga0157375_10000947
221 Ga0157375_10037539
222 Ga0157380_10000934
223 Ga0157379_10006421
224 Ga0163161_10001222
225 Ga0213875_10006437
226 Ga0207680_10006489
227 Ga0207647_10015335
228 Ga0207645_10001581
229 Ga0207660_10022489
230 Ga0207662_10001407
231 Ga0207652_10003316
232 Ga0207652_10013130
233 Ga0207659_10027763
234 Ga0207706_10001938
235 Ga0207691_10000302
236 Ga0207668_10003781
237 Ga0207703_10008450
238 Ga0207678_10000811
239 Ga0207648_10005325
240 Ga0207675_100008468
241 Ga0207698_10002212
242 Ga0207428_10000342
243 Ga0268264_10016592
244 Ga0307515_10023801
245 Ga0307408_100016581
246 Ga0307410_10003458
247 Ga0307410_10003985
248 Ga0307406_10000100
249 Ga0307409_100000001
250 Ga0307409_100044693
251 Ga0307416_100000104
252 Ga0307411_10008524
253 Ga0307415_100004658
254 Ga0307415_100008493
255 Ga0373947_0016861
256 Ga0395899_0002008
257 Ga0395899_0016622
258 Ga0395900_0013422
259 Ga0395898_0018281
260 Ga0436364_1025760
261 Ga0395901_0001692
262 Ga0395901_0035530
263 Ga0436365_1020713
264 Ga0439464_0000503
265 Ga0439440_0000564
266 Ga0466972_0004288
267 Ga0466972_0004327
268 Ga0453683_0000639
269 Ga0466965_0000308
270 Ga0466963_0001286
271 Ga0466964_0002406
272 Ga0453684_0042239
273 Ga0466971_0002530
274 Ga0466968_0003974
275 Ga0466968_0014188
276 Ga0466970_0007652
277 Ga0466970_0008506
278 Ga0466957_0001505
279 Ga0466957_0002857
280 Ga0466960_0003051
281 Ga0466960_0007178
282 Ga0451576_0000760
283 Ga0451576_0008217
284 Ga0466958_0009190
285 Ga0466967_0001297
286 Ga0466967_0011332
287 Ga0466967_0018051
288 Ga0466967_0021263
289 Ga0466967_0022366
290 Ga0466967_0023013
291 Ga0466967_0027974
292 Ga0466967_0052415
293 Ga0466967_0052678
294 Ga0495590_0013266
295 Ga0495629_0018190
296 Ga0495638_0035313
297 Ga0495582_0001334
298 Ga0495662_0001611
299 Ga0495585_0000877
300 Ga0495607_0030143
301 Ga0495630_0008557
302 Ga0495648_0006551
303 Ga0495668_0000146
304 Ga0495668_0025959
305 Ga0495611_0002990
306 Ga0495613_0005405
307 Ga0495649_0000628
308 Ga0495676_0012694
309 Ga0495687_000007
310 Ga0495626_0000555
311 Ga0496110_0000007
312 Ga0496110_0018950
313 Ga0496113_0008503
314 Ga0496114_0008690
315 Ga0501031_0026921
316 Ga0501032_0003710
317 Ga0501032_0014540
318 Ga0501034_0032068
319 Ga0501036_0010374
320 Ga0501036_0031223
321 Ga0501037_0019503
322 Ga0501038_0026012
323 Ga0501041_0001131
324 Ga0501043_0011533
325 Ga0501047_0010353
326 Ga0501047_0025026
327 Ga0501047_0060736
328 Ga0501067_0007652
329 Ga0501068_0001847
330 Ga0501068_0016615
331 Ga0501075_0059163
332 Ga0501079_0016900
333 Ga0501080_0007765
334 Ga0501081_0002250
335 Ga0501035_0002870
336 Ga0501035_0005292
337 Ga0501035_0036315
338 Ga0501044_0006767
339 Ga0501044_0038283
340 nmdc:mga08y16_331_c1
341 nmdc:mga0n895_5749_c1
342 nmdc:mga0rr50_3664_c1
343 nmdc:mga08x19_1988_c1
344 nmdc:mga0a205_71_c1
345 Ga0495601_0001860
346 Ga0495612_0004386
347 Ga0501084_0001526
348 Ga0501084_0011259
349 Ga0466962_0001086
350 Ga0466962_0008810
351 Ga0530510_0014142
352 2643877714
353 2643946280
354 2644384769
355 2644433069
356 2795785031
357 2812321917
358 2837270961
359 2867304111
360 2868092997
361 2884996260
362 2902801766
363 2917742801
364 2919054263
365 2919056072
366 2919475667
367 2966599472
368 8053946003

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01568

Molydop_binding

Molydopterin dinucleotide binding domain

646

758

0.98

PF04879

Molybdop_Fe4S4

Molybdopterin oxidoreductase Fe4S4 domain

36

90

0.95

PF00384

Molybdopterin

Molybdopterin oxidoreductase

93

522

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
7bkb-assembly1.cif.gz_D formate dehydrogenase - heterodisulfide reductase - formylmethanofuran dehydrogenase complex from methanospirillum hungatei (hexameric, composite structure) 0.9387 34 637
7bkb-assembly1.cif.gz_D formate dehydrogenase - heterodisulfide reductase - formylmethanofuran dehydrogenase complex from methanospirillum hungatei (hexameric, composite structure) 0.937 34 637
1fdi-assembly1.cif.gz_A oxidized form of formate dehydrogenase h from e. coli complexed with the inhibitor nitrite 0.9343 38 768
8j83-assembly1.cif.gz_A crystal structure of formate dehydrogenase from methylorubrum extorquens am1 0.9322 36 765
2jiq-assembly1.cif.gz_A a new catalytic mechanism of periplasmic nitrate reductase from desulfovibrio desulfuricans atcc 27774 from crystallographic and epr data and based on detailed analysis of the sixth ligand 0.9277 36 765
ID Description Score Start End Superfamily
2iv2X03 Alpha Beta;3-Layer(aba) Sandwich;Dimethylsulfoxide Reductase; domain 2;Dimethylsulfoxide Reductase, domain 2 0.955 174 361 3.40.228.10
2v45A03 Alpha Beta;3-Layer(aba) Sandwich;Dimethylsulfoxide Reductase; domain 2;Dimethylsulfoxide Reductase, domain 2 0.9366 170 367 3.40.228.10
2jirA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9332 94 584 3.40.50.740
2jirA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.927 94 584 3.40.50.740
2nyaA03 Alpha Beta;3-Layer(aba) Sandwich;Dimethylsulfoxide Reductase; domain 2;Dimethylsulfoxide Reductase, domain 2 0.9217 166 369 3.40.228.10
ID Description Score Start End GO Terms
AF-A0A0I9XYM0-F1-model_v4 deleted 0.992 2 563
AF-A0A1Q3M8E6-F1-model_v4 deleted 0.9782 26 638
AF-A0A0I9XYM0-F1-model_v4 deleted 0.9747 2 563
AF-A0A1V3WJK1-F1-model_v4 Molybdopterin oxidoreductase family protein 0.974 74 529 GO:0016491
GO:0042128
AF-A0A485AH75-F1-model_v4 Formate dehydrogenase H (EC 1.2.1.2) 0.9738 189 327 GO:0003954
GO:0016020
GO:0022904

Map