F282960

General Info

Members Datasets Scaffolds Average Seq Length
184 147 368 293

Family's Representative Sequence

Representative Sequence 3300039447|Ga0436361_1128550|Ga0436361_1128550_24_1040
Length 320
Sequence MSTSNLTRRQVLMSGVLGIAGTTSLIQTLPAGTATAGSPSAEGAGTFTIGGDLVVNRLGFGAMRITGPGIWGEPKDPAEARRVLQRAVELGVNFIDTADAYGPEVSERLIAASLSPYPRGLIIATKGGLLRPGASQWVPDGRPEHLREACEGSLKRLKVARIDLYQFHHPDPKVPLEDSIGELARLREQGKIRHVGVSNFSTDELARARRIVPIVSVQNRYNLADRSSEDVLGVCTREGLAFIPWAPLASGSTGKLESSPALDQVAAAHGASIMQVAIAWLLARSPAMLPIPGTSSVAHLEEDLAAARLQLTAAELKLLA

Samples

Sample ID Description Type Environment
1 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
4 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
5 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
6 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
7 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
8 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
9 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
10 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
11 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
12 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
13 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
14 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
15 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
16 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
17 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
18 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
19 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
20 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
21 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
22 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
23 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
24 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
25 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
26 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
27 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
28 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
29 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
30 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
31 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
32 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
33 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
34 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
35 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
36 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
37 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
38 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
39 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
40 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
41 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
42 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
43 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
44 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
45 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
46 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
47 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
48 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
49 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
50 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
51 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
52 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
53 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
54 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
78 3300027717 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes) (version 2) Metagenome Rhizosphere
79 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
80 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
81 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
82 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
83 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
84 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
85 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
86 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
87 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
88 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
89 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
90 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
91 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
92 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
93 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
94 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
95 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
96 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
97 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
98 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
99 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
100 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
101 3300042438 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311FE14Z081617_5533 Metagenome Rhizosphere
102 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
103 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
104 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
105 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
106 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
107 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
108 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
109 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
110 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
111 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
112 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
113 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
114 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
115 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
116 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
117 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
118 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
119 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
120 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
121 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
122 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
123 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
124 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
125 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
126 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
127 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
128 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
129 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
130 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
131 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
132 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
133 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
134 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
135 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
136 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
137 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
138 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
139 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
140 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
141 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
142 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
143 2861691609 Methylorubrum thiocyanatum DSM 11490 Isolate Rhizosphere
144 2869278585 Mesorhizobium sp. M8A.F.Ca.ET.198.01.1.1 Isolate Nodule
145 2958041894 Mesorhizobium sp. M00.F.Ca.ET.149.01.1.1 Isolate Nodule
146 2970593180 Mesorhizobium sp. M8A.F.Ca.ET.197.01.1.1 Isolate Nodule
147 643348564 Methylobacterium nodulans ORS 2060 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 97.28
Metatranscriptomes 0
Isolates 2.72

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.72
Nodule 2.17
Rhizoplane 0.54
Rhizosphere 90.22
Stem 0
Stem Tuber 0
Unclassified 4.89

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0436361_1128550 3300039447 Bacteria 1101
2 JGI25406J46586_10004634 3300003203 Bacteria 6399
3 Ga0070676_10005970 3300005328 Bacteria 6502
4 Ga0070677_10051202 3300005333 Bacteria 1671
5 Ga0070668_100246879 3300005347 Bacteria 1480
6 Ga0070674_100092456 3300005356 Bacteria 2187
7 Ga0070674_100347428 3300005356 Bacteria 1197
8 Ga0070714_100009824 3300005435 Bacteria 7542
9 Ga0070713_100007488 3300005436 Bacteria 7667
10 Ga0070713_100058812 3300005436 Bacteria 3207
11 Ga0070713_100436007 3300005436 Bacteria 1228
12 Ga0070713_100476982 3300005436 Bacteria 1175
13 Ga0070710_10021868 3300005437 Bacteria 3338
14 Ga0070711_100183168 3300005439 Unclassified 1604
15 Ga0070700_100112738 3300005441 Bacteria 1811
16 Ga0070708_100028659 3300005445 Bacteria 4794
17 Ga0070662_100071385 3300005457 Bacteria 2560
18 Ga0070706_100001556 3300005467 Bacteria 23940
19 Ga0070706_100019570 3300005467 Bacteria 6244
20 Ga0070698_100000793 3300005471 Bacteria 34351
21 Ga0070699_100109048 3300005518 Bacteria 2429
22 Ga0070697_100000806 3300005536 Bacteria 23524
23 Ga0068853_100178801 3300005539 Bacteria 1923
24 Ga0070672_100059987 3300005543 Bacteria 2994
25 Ga0070672_100273086 3300005543 Bacteria 1428
26 Ga0070695_100240192 3300005545 Unclassified 1314
27 Ga0070665_100227473 3300005548 Bacteria 1865
28 Ga0068855_100137582 3300005563 Bacteria 2786
29 Ga0068857_100349418 3300005577 Bacteria 1369
30 Ga0068852_100587466 3300005616 Bacteria 1117
31 Ga0068859_100184949 3300005617 Bacteria 2167
32 Ga0068861_100009060 3300005719 Bacteria 6860
33 Ga0068870_10034320 3300005840 Bacteria 2596
34 Ga0068863_100020825 3300005841 Bacteria 6263
35 Ga0081539_10002433 3300005985 Bacteria 26277
36 Ga0070717_10001098 3300006028 Bacteria 18213
37 Ga0070717_10054269 3300006028 Bacteria 3305
38 Ga0070717_10575364 3300006028 Unclassified 1021
39 Ga0075365_10098208 3300006038 Bacteria 2003
40 Ga0070715_10072180 3300006163 Bacteria 1545
41 Ga0070716_100068013 3300006173 Bacteria 2082
42 Ga0070716_100124534 3300006173 Bacteria 1619
43 Ga0070712_100192473 3300006175 Bacteria 1597
44 Ga0075428_100107944 3300006844 Bacteria 3034
45 Ga0075431_100299317 3300006847 Bacteria 1625
46 Ga0075433_10156185 3300006852 Bacteria 2030
47 Ga0068865_100279399 3300006881 Bacteria 1329
48 Ga0075436_100116783 3300006914 Bacteria 1865
49 Ga0075436_100295261 3300006914 Bacteria 1161
50 Ga0097620_100184940 3300006931 Bacteria 2167
51 Ga0075435_100037435 3300007076 Bacteria 3864
52 Ga0111539_10147630 3300009094 Bacteria 2753
53 Ga0114129_10246109 3300009147 Bacteria 2402
54 Ga0105242_10355682 3300009176 Bacteria 1354
55 Ga0105248_10011540 3300009177 Bacteria 9737
56 Ga0105249_10050224 3300009553 Unclassified 3803
57 Ga0105239_10056702 3300010375 Bacteria 4297
58 Ga0163162_10352992 3300013306 Bacteria 1603
59 Ga0157380_10170272 3300014326 Bacteria 1902
60 Ga0157376_10092521 3300014969 Bacteria 2622
61 Ga0157376_10229972 3300014969 Bacteria 1722
62 Ga0213872_10080819 3300021361 Bacteria 1460
63 Ga0213871_10003419 3300021441 Bacteria 3057
64 Ga0213871_10021860 3300021441 Bacteria 1598
65 Ga0209674_103154 3300025226 Bacteria 3130
66 Ga0207682_10025172 3300025893 Bacteria 2360
67 Ga0207692_10076469 3300025898 Bacteria 1778
68 Ga0207699_10148591 3300025906 Bacteria 1548
69 Ga0207699_10373883 3300025906 Bacteria 1010
70 Ga0207645_10003907 3300025907 Bacteria 11136
71 Ga0207643_10104015 3300025908 Bacteria 1667
72 Ga0207684_10005540 3300025910 Bacteria 11627
73 Ga0207684_10015034 3300025910 Bacteria 6663
74 Ga0207693_10039057 3300025915 Bacteria 3737
75 Ga0207693_10045497 3300025915 Bacteria 3449
76 Ga0207693_10342995 3300025915 Bacteria 1169
77 Ga0207646_10003981 3300025922 Bacteria 16377
78 Ga0207681_10238818 3300025923 Bacteria 1413
79 Ga0207700_10007673 3300025928 Bacteria 6624
80 Ga0207664_10053662 3300025929 Bacteria 3192
81 Ga0207706_10008213 3300025933 Bacteria 9630
82 Ga0207686_10316189 3300025934 Bacteria 1165
83 Ga0207704_10097102 3300025938 Bacteria 1953
84 Ga0207665_10130070 3300025939 Bacteria 1786
85 Ga0207665_10150789 3300025939 Bacteria 1665
86 Ga0207665_10447471 3300025939 Unclassified 991
87 Ga0207691_10050978 3300025940 Bacteria 3787
88 Ga0207691_10209441 3300025940 Bacteria 1694
89 Ga0207691_10238690 3300025940 Bacteria 1572
90 Ga0207711_10214993 3300025941 Bacteria 1757
91 Ga0207668_10285601 3300025972 Bacteria 1355
92 Ga0207708_10219885 3300026075 Bacteria 1521
93 Ga0207648_10003332 3300026089 Bacteria 16874
94 Ga0207676_10023274 3300026095 Bacteria 4568
95 Ga0207674_10637551 3300026116 Bacteria 1029
96 Ga0207675_100001754 3300026118 Bacteria 21690
97 Ga0209971_1004098 3300027682 Bacteria 3451
98 Ga0209998_10043001 3300027717 Bacteria 1030
99 Ga0207428_10029967 3300027907 Bacteria 4501
100 Ga0265337_1000076 3300028556 Bacteria 46580
101 Ga0265334_10006593 3300028573 Bacteria 4996
102 Ga0265318_10026659 3300028577 Bacteria 2274
103 Ga0265338_10001528 3300028800 Bacteria 37342
104 Ga0265338_10040728 3300028800 Bacteria 4358
105 Ga0265338_10304196 3300028800 Bacteria 1158
106 Ga0265324_10001718 3300029957 Bacteria 12051
107 Ga0265328_10025068 3300031239 Bacteria 2249
108 Ga0265320_10047533 3300031240 Bacteria 2098
109 Ga0265325_10023079 3300031241 Bacteria 3402
110 Ga0265340_10042269 3300031247 Bacteria 2238
111 Ga0265327_10000921 3300031251 Bacteria 43096
112 Ga0265316_10184884 3300031344 Bacteria 1550
113 Ga0265313_10001442 3300031595 Bacteria 22199
114 Ga0265313_10001603 3300031595 Bacteria 21011
115 Ga0265342_10006560 3300031712 Bacteria 8656
116 Ga0373937_0018350 3300036401 Bacteria 6247
117 Ga0395899_0037360 3300037312 Bacteria 3640
118 Ga0395900_0028259 3300037418 Bacteria 5745
119 Ga0395898_0028779 3300037466 Bacteria 5569
120 Ga0395901_0171373 3300038443 Bacteria 2277
121 Ga0436360_0569917 3300039438 Bacteria 7306
122 Ga0436361_0763250 3300039447 Bacteria 1637
123 Ga0436363_0639859 3300039450 Bacteria 1141
124 Ga0436363_0666476 3300039450 Bacteria 1818
125 Ga0436363_0771236 3300039450 Bacteria 1906
126 Ga0436363_0936471 3300039450 Unclassified 2611
127 Ga0436363_1119552 3300039450 Bacteria 18440
128 Ga0436362_0334754 3300039453 Bacteria 2764
129 Ga0439459_0000686 3300042438 Bacteria 4628
130 Ga0451576_0050592 3300045051 Bacteria 4357
131 Ga0495629_0074501 3300046459 Unclassified 2370
132 Ga0495641_0084986 3300046461 Unclassified 1417
133 Ga0495610_0001850 3300046512 Bacteria 18345
134 Ga0495680_0024253 3300047322 Bacteria 5033
135 Ga0496109_0028886 3300048912 Bacteria 4965
136 Ga0496124_0071377 3300048927 Bacteria 2879
137 Ga0496126_0000082 3300048929 Bacteria 218571
138 Ga0496126_0018977 3300048929 Bacteria 6791
139 Ga0501031_0004840 3300049568 Bacteria 8748
140 Ga0501034_0472397 3300049571 Bacteria 1170
141 Ga0501036_0018198 3300049572 Bacteria 5883
142 Ga0501037_0015864 3300049573 Bacteria 5547
143 Ga0501041_0011086 3300049577 Bacteria 5321
144 Ga0501043_0017484 3300049579 Bacteria 5622
145 Ga0501046_0000884 3300049580 Bacteria 29169
146 Ga0501047_0565258 3300049581 Bacteria 961
147 Ga0501070_0054051 3300049586 Bacteria 3330
148 Ga0501070_0076894 3300049586 Bacteria 2763
149 Ga0501070_0506752 3300049586 Bacteria 969
150 Ga0501071_0002475 3300049587 Bacteria 11220
151 Ga0501072_0003895 3300049588 Bacteria 11283
152 Ga0501073_0010193 3300049589 Bacteria 6904
153 Ga0501075_0004151 3300049591 Bacteria 9776
154 Ga0501077_0018409 3300049593 Bacteria 4419
155 Ga0501081_0013037 3300049743 Bacteria 5469
156 Ga0501083_0000858 3300049744 Bacteria 20023
157 Ga0501083_0004151 3300049744 Bacteria 10200
158 Ga0501035_0003561 3300049822 Bacteria 14874
159 Ga0501044_0144142 3300049823 Bacteria 2369
160 Ga0501044_0210524 3300049823 Bacteria 1898
161 Ga0501044_0361775 3300049823 Bacteria 1369
162 Ga0501045_0012605 3300049824 Bacteria 5953
163 nmdc:mga05p37_99396_c1 3300050507 Bacteria 3583
164 nmdc:mga09592_225523_c1 3300050508 Bacteria 1623
165 nmdc:mga09592_369106_c1 3300050508 Bacteria 1241
166 nmdc:mga06r32_54588_c1 3300050510 Bacteria 3832
167 nmdc:mga08y16_57036_c1 3300050511 Bacteria 4082
168 nmdc:mga0rr50_227293_c1 3300050513 Bacteria 1543
169 nmdc:mga0rr50_366523_c1 3300050513 Bacteria 1213
170 nmdc:mga08x19_258216_c1 3300050514 Bacteria 1204
171 nmdc:mga0a205_256601_c1 3300050515 Bacteria 1627
172 Ga0495612_0191909 3300053078 Bacteria 899
173 Ga0495619_0230772 3300053085 Unclassified 1282
174 Ga0500583_0015592 3300053092 Bacteria 3010
175 Ga0500650_0123127 3300053098 Bacteria 1208
176 Ga0500616_0000880 3300053153 Bacteria 33112
177 Ga0501084_0019044 3300054114 Bacteria 5716
178 Ga0501084_0042186 3300054114 Bacteria 3816
179 Ga0501082_0173490 3300060353 Bacteria 1875
180 2861692719 2861691609 Bacteria 5628931
181 2869278936 2869278585 Bacteria 7077053
182 2958058357 2958041894 Bacteria 13082850
183 2970593530 2970593180 Bacteria 7073582
184 643598312 643348564 Bacteria 8839022
185 Ga0436361_1128550
186 JGI25406J46586_10004634
187 Ga0070676_10005970
188 Ga0070677_10051202
189 Ga0070668_100246879
190 Ga0070674_100092456
191 Ga0070674_100347428
192 Ga0070714_100009824
193 Ga0070713_100007488
194 Ga0070713_100058812
195 Ga0070713_100436007
196 Ga0070713_100476982
197 Ga0070710_10021868
198 Ga0070711_100183168
199 Ga0070700_100112738
200 Ga0070708_100028659
201 Ga0070662_100071385
202 Ga0070706_100001556
203 Ga0070706_100019570
204 Ga0070698_100000793
205 Ga0070699_100109048
206 Ga0070697_100000806
207 Ga0068853_100178801
208 Ga0070672_100059987
209 Ga0070672_100273086
210 Ga0070695_100240192
211 Ga0070665_100227473
212 Ga0068855_100137582
213 Ga0068857_100349418
214 Ga0068852_100587466
215 Ga0068859_100184949
216 Ga0068861_100009060
217 Ga0068870_10034320
218 Ga0068863_100020825
219 Ga0081539_10002433
220 Ga0070717_10001098
221 Ga0070717_10054269
222 Ga0070717_10575364
223 Ga0075365_10098208
224 Ga0070715_10072180
225 Ga0070716_100068013
226 Ga0070716_100124534
227 Ga0070712_100192473
228 Ga0075428_100107944
229 Ga0075431_100299317
230 Ga0075433_10156185
231 Ga0068865_100279399
232 Ga0075436_100116783
233 Ga0075436_100295261
234 Ga0097620_100184940
235 Ga0075435_100037435
236 Ga0111539_10147630
237 Ga0114129_10246109
238 Ga0105242_10355682
239 Ga0105248_10011540
240 Ga0105249_10050224
241 Ga0105239_10056702
242 Ga0163162_10352992
243 Ga0157380_10170272
244 Ga0157376_10092521
245 Ga0157376_10229972
246 Ga0213872_10080819
247 Ga0213871_10003419
248 Ga0213871_10021860
249 Ga0209674_103154
250 Ga0207682_10025172
251 Ga0207692_10076469
252 Ga0207699_10148591
253 Ga0207699_10373883
254 Ga0207645_10003907
255 Ga0207643_10104015
256 Ga0207684_10005540
257 Ga0207684_10015034
258 Ga0207693_10039057
259 Ga0207693_10045497
260 Ga0207693_10342995
261 Ga0207646_10003981
262 Ga0207681_10238818
263 Ga0207700_10007673
264 Ga0207664_10053662
265 Ga0207706_10008213
266 Ga0207686_10316189
267 Ga0207704_10097102
268 Ga0207665_10130070
269 Ga0207665_10150789
270 Ga0207665_10447471
271 Ga0207691_10050978
272 Ga0207691_10209441
273 Ga0207691_10238690
274 Ga0207711_10214993
275 Ga0207668_10285601
276 Ga0207708_10219885
277 Ga0207648_10003332
278 Ga0207676_10023274
279 Ga0207674_10637551
280 Ga0207675_100001754
281 Ga0209971_1004098
282 Ga0209998_10043001
283 Ga0207428_10029967
284 Ga0265337_1000076
285 Ga0265334_10006593
286 Ga0265318_10026659
287 Ga0265338_10001528
288 Ga0265338_10040728
289 Ga0265338_10304196
290 Ga0265324_10001718
291 Ga0265328_10025068
292 Ga0265320_10047533
293 Ga0265325_10023079
294 Ga0265340_10042269
295 Ga0265327_10000921
296 Ga0265316_10184884
297 Ga0265313_10001442
298 Ga0265313_10001603
299 Ga0265342_10006560
300 Ga0373937_0018350
301 Ga0395899_0037360
302 Ga0395900_0028259
303 Ga0395898_0028779
304 Ga0395901_0171373
305 Ga0436360_0569917
306 Ga0436361_0763250
307 Ga0436363_0639859
308 Ga0436363_0666476
309 Ga0436363_0771236
310 Ga0436363_0936471
311 Ga0436363_1119552
312 Ga0436362_0334754
313 Ga0439459_0000686
314 Ga0451576_0050592
315 Ga0495629_0074501
316 Ga0495641_0084986
317 Ga0495610_0001850
318 Ga0495680_0024253
319 Ga0496109_0028886
320 Ga0496124_0071377
321 Ga0496126_0000082
322 Ga0496126_0018977
323 Ga0501031_0004840
324 Ga0501034_0472397
325 Ga0501036_0018198
326 Ga0501037_0015864
327 Ga0501041_0011086
328 Ga0501043_0017484
329 Ga0501046_0000884
330 Ga0501047_0565258
331 Ga0501070_0054051
332 Ga0501070_0076894
333 Ga0501070_0506752
334 Ga0501071_0002475
335 Ga0501072_0003895
336 Ga0501073_0010193
337 Ga0501075_0004151
338 Ga0501077_0018409
339 Ga0501081_0013037
340 Ga0501083_0000858
341 Ga0501083_0004151
342 Ga0501035_0003561
343 Ga0501044_0144142
344 Ga0501044_0210524
345 Ga0501044_0361775
346 Ga0501045_0012605
347 nmdc:mga05p37_99396_c1
348 nmdc:mga09592_225523_c1
349 nmdc:mga09592_369106_c1
350 nmdc:mga06r32_54588_c1
351 nmdc:mga08y16_57036_c1
352 nmdc:mga0rr50_227293_c1
353 nmdc:mga0rr50_366523_c1
354 nmdc:mga08x19_258216_c1
355 nmdc:mga0a205_256601_c1
356 Ga0495612_0191909
357 Ga0495619_0230772
358 Ga0500583_0015592
359 Ga0500650_0123127
360 Ga0500616_0000880
361 Ga0501084_0019044
362 Ga0501084_0042186
363 Ga0501082_0173490
364 2861692719
365 2869278936
366 2958058357
367 2970593530
368 643598312

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00248

Aldo_ket_red

Aldo/keto reductase family

57

320

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
8hnq-assembly1.cif.gz_A the structure of a alcohol dehydrogenase akr13b2 with nadp 0.9735 5 282
3v0u-assembly1.cif.gz_A crystal structure of perakine reductase, founder member of a novel akr subfamily with unique conformational changes during nadph binding 0.9071 19 286
6ky6-assembly2.cif.gz_B crystal structure of a thermostable aldo-keto reductase tm1743 in complexs with inhibitor epalrestat in space group p3221cc 0.8934 19 286
4xap-assembly1.cif.gz_A crystal structure of aldo-keto reductase from sinorhizobium meliloti 1021 0.8857 10 284
3v0t-assembly1.cif.gz_A crystal structure of perakine reductase, founder member of a novel akr subfamily with unique conformational changes during nadph binding 0.8838 19 284
ID Description Score Start End Superfamily
af_O94315_19_306_3.20.20.100 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;NADP-dependent oxidoreductase domain 0.9763 13 284 3.20.20.100
af_P25906_7_286_3.20.20.100 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;NADP-dependent oxidoreductase domain 0.9251 20 285 3.20.20.100
af_O94315_19_306_3.20.20.100 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;NADP-dependent oxidoreductase domain 0.919 13 284 3.20.20.100
af_F4HPY8_8_325_3.20.20.100 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;NADP-dependent oxidoreductase domain 0.9085 19 285 3.20.20.100
3v0uA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;NADP-dependent oxidoreductase domain 0.9071 19 286 3.20.20.100
ID Description Score Start End GO Terms
AF-A0A656L203-F1-model_v4 deleted 0.9803 12 200
AF-A0A2W6ENT2-F1-model_v4 Oxidoreductase 0.9801 3 215 GO:0004033
GO:0005737
AF-A0A1Q3Z531-F1-model_v4 Oxidoreductase 0.9781 1 286 GO:0004033
GO:0005737
AF-A0A520QIZ3-F1-model_v4 Aldo/keto reductase 0.9773 11 282 GO:0004033
GO:0005737
AF-Q9RT75-F1-model_v4 Oxidoreductase, putative 0.9765 5 284 GO:0004033
GO:0005737

Map