F282914

General Info

Members Datasets Scaffolds Average Seq Length
184 64 360 371

Family's Representative Sequence

Representative Sequence 3300036647|Ga0316582_0104906|Ga0316582_0104906_252_1442
Length 396
Sequence LWDIYLLTKYDGRYYLGIAMSNSRLRSLIRKEFIQIRRDTRTLILVLIIPIMQLFLLGYAATNDVRNVPLAVYDQDHGPEARALLDAYRAAEYFTISYVANSESDLRDLIDSSQARAGLIIPPNYTDKILGGQTGEVMFVLDGSDPTVASTALSAAKLIAQAYSTQVLEARPASIGRIAVIQPPVQANTTVWYNPDLVSAYFMIPGVIGMILFALTSILTASAIVRERERGTIEQLIVTPIRPWELVLGKLLPYVILAFLNTLEVLALGYFWFGVPIRGSLWLIALASFLFLLSSLGIGLLASTIANTQQEAMLTVWMMMLPSIFLAGFFFPLEAMPKILQWISYIFPLRYYLVIIRALMLKGVGASAFKVELIALAVFGVIIMTLAALRFRKRLD

Samples

Sample ID Description Type Environment
1 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
2 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
3 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
4 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
5 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
6 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
7 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
8 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
9 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
10 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
11 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
12 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
13 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
14 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
15 3300006194 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 Metagenome Rhizosphere
16 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
17 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
18 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
19 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
20 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
21 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
22 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
23 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
24 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
25 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
26 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
27 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
32 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
33 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
34 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
35 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
36 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
37 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
38 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
39 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
40 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
41 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
42 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
43 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
44 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
45 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
46 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
47 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
48 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
49 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
50 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
51 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
52 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
53 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
54 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
55 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
56 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
57 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
58 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
59 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
60 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
61 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
62 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
63 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
64 8007371054 Clostridium sp. YIM B02515 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 99.46
Metatranscriptomes 0
Isolates 0.54

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 95.65
Stem 0
Stem Tuber 0
Unclassified 21.74

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0316582_0104906 3300036647 Unclassified 1876
2 Ga0065707_10001516 3300005295 Bacteria 7155
3 Ga0065707_10090918 3300005295 Bacteria 4034
4 Ga0065707_10092694 3300005295 Bacteria 3731
5 Ga0065707_10098023 3300005295 Bacteria 3119
6 Ga0065707_10112938 3300005295 Bacteria 2344
7 Ga0070674_100242869 3300005356 Bacteria 1411
8 Ga0070673_100278697 3300005364 Bacteria 1466
9 Ga0070700_100257742 3300005441 Bacteria 1254
10 Ga0070694_100019164 3300005444 Bacteria 4350
11 Ga0070706_100029887 3300005467 Bacteria 5019
12 Ga0070706_100203559 3300005467 Bacteria 1849
13 Ga0070698_100016283 3300005471 Bacteria 7849
14 Ga0070698_100029305 3300005471 Bacteria 5713
15 Ga0070698_100040068 3300005471 Bacteria 4817
16 Ga0070699_100005485 3300005518 Bacteria 11121
17 Ga0070699_100011035 3300005518 Bacteria 7812
18 Ga0070699_100041412 3300005518 Bacteria 3987
19 Ga0070699_100099144 3300005518 Bacteria 2553
20 Ga0070695_100043672 3300005545 Unclassified 2851
21 Ga0068857_100215584 3300005577 Bacteria 1752
22 Ga0068857_100294821 3300005577 Unclassified 1494
23 Ga0068859_100074721 3300005617 Unclassified 3428
24 Ga0068862_100233800 3300005844 Bacteria 1668
25 Ga0068862_100252868 3300005844 Unclassified 1607
26 Ga0081539_10001257 3300005985 Bacteria 44920
27 Ga0081539_10024690 3300005985 Unclassified 3892
28 Ga0075427_10000556 3300006194 Bacteria 4324
29 Ga0075428_100038485 3300006844 Bacteria 5264
30 Ga0075428_100183198 3300006844 Unclassified 2266
31 Ga0075431_100136438 3300006847 Bacteria 2529
32 Ga0075433_10007911 3300006852 Bacteria 8456
33 Ga0075429_100006256 3300006880 Bacteria 10306
34 Ga0075429_100036131 3300006880 Bacteria 4296
35 Ga0075429_100064143 3300006880 Unclassified 3200
36 Ga0075429_100070475 3300006880 Bacteria 3044
37 Ga0075429_100249079 3300006880 Bacteria 1556
38 Ga0097620_100074721 3300006931 Unclassified 3428
39 Ga0111539_10016335 3300009094 Bacteria 9203
40 Ga0111539_10315357 3300009094 Bacteria 1820
41 Ga0114129_10012601 3300009147 Bacteria 12038
42 Ga0114129_10019688 3300009147 Bacteria 9607
43 Ga0114129_10029515 3300009147 Bacteria 7767
44 Ga0114129_10039500 3300009147 Bacteria 6653
45 Ga0114129_10114423 3300009147 Unclassified 3719
46 Ga0114129_10138122 3300009147 Bacteria 3343
47 Ga0114129_10252374 3300009147 Bacteria 2367
48 Ga0114129_10296515 3300009147 Bacteria 2156
49 Ga0114129_10309364 3300009147 Unclassified 2103
50 Ga0105242_10070878 3300009176 Unclassified 2891
51 Ga0105237_10331657 3300009545 Unclassified 1526
52 Ga0105249_10239701 3300009553 Unclassified 1792
53 Ga0105246_10199322 3300011119 Bacteria 1555
54 Ga0207684_10099427 3300025910 Bacteria 2485
55 Ga0207686_10103713 3300025934 Bacteria 1903
56 Ga0207651_10280943 3300025960 Unclassified 1376
57 Ga0207708_10028408 3300026075 Bacteria 4236
58 Ga0207674_10307202 3300026116 Unclassified 1535
59 Ga0268265_10059263 3300028380 Unclassified 2928
60 Ga0268265_10107958 3300028380 Unclassified 2265
61 Ga0268265_10249915 3300028380 Bacteria 1570
62 Ga0265318_10015526 3300028577 Unclassified 3166
63 Ga0265323_10029703 3300028653 Bacteria 2043
64 Ga0265338_10224394 3300028800 Unclassified 1401
65 Ga0265320_10083103 3300031240 Unclassified 1492
66 Ga0265340_10032253 3300031247 Unclassified 2615
67 Ga0265331_10041734 3300031250 Unclassified 2228
68 Ga0316575_10006516 3300031665 Bacteria 4203
69 Ga0316579_10007881 3300031691 Bacteria 4416
70 Ga0316579_10029295 3300031691 Bacteria 2511
71 Ga0316576_10005884 3300031727 Bacteria 7566
72 Ga0316576_10117916 3300031727 Bacteria 1992
73 Ga0316578_10028133 3300031728 Bacteria 3182
74 Ga0316578_10073475 3300031728 Bacteria 2027
75 Ga0316577_10000070 3300031733 Bacteria 25748
76 Ga0316577_10000513 3300031733 Bacteria 15502
77 Ga0316577_10014659 3300031733 Bacteria 4305
78 Ga0316577_10025939 3300031733 Unclassified 3260
79 Ga0316577_10027209 3300031733 Bacteria 3188
80 Ga0316577_10161479 3300031733 Unclassified 1264
81 Ga0316574_0002437 3300035398 Bacteria 9340
82 Ga0316574_0013183 3300035398 Bacteria 4748
83 Ga0316574_0017462 3300035398 Bacteria 4200
84 Ga0316574_0021382 3300035398 Bacteria 3841
85 Ga0373937_0132964 3300036401 Bacteria 2325
86 Ga0316582_0023086 3300036647 Bacteria 3703
87 Ga0316582_0026599 3300036647 Unclassified 3485
88 Ga0316582_0040432 3300036647 Bacteria 2910
89 Ga0316582_0070160 3300036647 Bacteria 2267
90 Ga0316582_0116286 3300036647 Bacteria 1785
91 Ga0316584_0001498 3300036712 Bacteria 14049
92 Ga0316584_0007634 3300036712 Bacteria 7419
93 Ga0316584_0015891 3300036712 Bacteria 5392
94 Ga0316584_0019930 3300036712 Bacteria 4854
95 Ga0316584_0022955 3300036712 Bacteria 4555
96 Ga0316584_0029086 3300036712 Bacteria 4079
97 Ga0316584_0036353 3300036712 Bacteria 3654
98 Ga0316584_0198342 3300036712 Bacteria 1482
99 Ga0316581_0010909 3300037588 Bacteria 2530
100 Ga0316581_0015736 3300037588 Bacteria 2166
101 Ga0400484_21962 3300038725 Bacteria 2039
102 Ga0400484_44377 3300038725 Bacteria 1904
103 Ga0400483_054495 3300039062 Bacteria 8794
104 Ga0400483_112958 3300039062 Unclassified 3648
105 Ga0400489_83284 3300039093 Bacteria 19381
106 Ga0451577_0002115 3300042876 Bacteria 24431
107 Ga0451577_0002972 3300042876 Bacteria 19383
108 Ga0451577_0017360 3300042876 Bacteria 6651
109 Ga0451577_0051100 3300042876 Bacteria 3690
110 Ga0451577_0053804 3300042876 Unclassified 3593
111 Ga0451577_0107851 3300042876 Unclassified 2489
112 Ga0453683_0001836 3300044673 Bacteria 17467
113 Ga0453683_0002502 3300044673 Bacteria 14190
114 Ga0453683_0014760 3300044673 Bacteria 5069
115 Ga0453683_0020980 3300044673 Bacteria 4172
116 Ga0453683_0034887 3300044673 Bacteria 3171
117 Ga0453683_0037065 3300044673 Bacteria 3068
118 Ga0453683_0062742 3300044673 Bacteria 2323
119 Ga0453683_0093419 3300044673 Unclassified 1886
120 Ga0453684_0000023 3300044712 Bacteria 857153
121 Ga0453684_0000035 3300044712 Bacteria 725956
122 Ga0453684_0000055 3300044712 Bacteria 532014
123 Ga0453684_0000420 3300044712 Bacteria 172995
124 Ga0453684_0000456 3300044712 Bacteria 164108
125 Ga0453684_0000522 3300044712 Bacteria 146962
126 Ga0453684_0000528 3300044712 Bacteria 146005
127 Ga0453684_0001722 3300044712 Bacteria 58633
128 Ga0453684_0001930 3300044712 Bacteria 53573
129 Ga0453684_0003393 3300044712 Bacteria 36029
130 Ga0453684_0003436 3300044712 Bacteria 35721
131 Ga0453684_0003688 3300044712 Bacteria 33939
132 Ga0453684_0004359 3300044712 Bacteria 30027
133 Ga0453684_0019736 3300044712 Bacteria 10233
134 Ga0453684_0026290 3300044712 Bacteria 8417
135 Ga0453684_0035554 3300044712 Bacteria 6882
136 Ga0453684_0037091 3300044712 Bacteria 6696
137 Ga0453684_0048471 3300044712 Bacteria 5617
138 Ga0453684_0053975 3300044712 Bacteria 5240
139 Ga0453684_0071722 3300044712 Bacteria 4378
140 Ga0453684_0078421 3300044712 Bacteria 4133
141 Ga0453684_0086012 3300044712 Unclassified 3904
142 Ga0453684_0093481 3300044712 Unclassified 3704
143 Ga0453684_0113860 3300044712 Bacteria 3280
144 Ga0453684_0115493 3300044712 Bacteria 3252
145 Ga0453684_0117483 3300044712 Unclassified 3218
146 Ga0453684_0139883 3300044712 Unclassified 2893
147 Ga0453684_0233645 3300044712 Bacteria 2121
148 Ga0453684_0243725 3300044712 Bacteria 2068
149 Ga0453684_0316167 3300044712 Bacteria 1770
150 Ga0453684_0337992 3300044712 Bacteria 1701
151 Ga0453684_0487589 3300044712 Unclassified 1367
152 Ga0453684_0588787 3300044712 Bacteria 1221
153 Ga0451576_0000009 3300045051 Bacteria 712666
154 Ga0451576_0000104 3300045051 Bacteria 215927
155 Ga0451576_0001403 3300045051 Bacteria 41355
156 Ga0451576_0007783 3300045051 Bacteria 12714
157 Ga0451576_0008934 3300045051 Bacteria 11688
158 Ga0451576_0345485 3300045051 Unclassified 1558
159 Ga0495630_0109987 3300046517 Bacteria 2087
160 Ga0501073_0183063 3300049589 Bacteria 1450
161 Ga0501076_0077996 3300049592 Bacteria 2658
162 Ga0501076_0139268 3300049592 Bacteria 1971
163 nmdc:mga05p37_119378_c1 3300050507 Bacteria 3240
164 nmdc:mga05p37_132585_c1 3300050507 Bacteria 3057
165 nmdc:mga05p37_175440_c1 3300050507 Bacteria 2611
166 nmdc:mga05p37_184613_c1 3300050507 Bacteria 2536
167 nmdc:mga05p37_18804_c2 3300050507 Bacteria 7805
168 nmdc:mga05p37_413953_c1 3300050507 Bacteria 1571
169 nmdc:mga05p37_6492_c1 3300050507 Bacteria 13796
170 nmdc:mga09592_284558_c1 3300050508 Unclassified 1434
171 nmdc:mga09592_5896_c1 3300050508 Bacteria 9992
172 nmdc:mga09592_62023_c1 3300050508 Bacteria 3163
173 nmdc:mga09592_64567_c1 3300050508 Unclassified 3099
174 nmdc:mga06r32_23523_c1 3300050510 Bacteria 5702
175 nmdc:mga06r32_74562_c1 3300050510 Bacteria 3290
176 nmdc:mga08y16_112934_c1 3300050511 Bacteria 2828
177 nmdc:mga0n895_83751_c1 3300050512 Unclassified 3181
178 nmdc:mga0a205_336985_c1 3300050515 Bacteria 1377
179 nmdc:mga0a205_96712_c1 3300050515 Bacteria 2852
180 8007374795 8007371054 Bacteria 4849201
181 Ga0316582_0104906
182 Ga0065707_10001516
183 Ga0065707_10090918
184 Ga0065707_10092694
185 Ga0065707_10098023
186 Ga0065707_10112938
187 Ga0070674_100242869
188 Ga0070673_100278697
189 Ga0070700_100257742
190 Ga0070694_100019164
191 Ga0070706_100029887
192 Ga0070706_100203559
193 Ga0070698_100016283
194 Ga0070698_100029305
195 Ga0070698_100040068
196 Ga0070699_100005485
197 Ga0070699_100011035
198 Ga0070699_100041412
199 Ga0070699_100099144
200 Ga0070695_100043672
201 Ga0068857_100215584
202 Ga0068857_100294821
203 Ga0068859_100074721
204 Ga0068862_100233800
205 Ga0068862_100252868
206 Ga0081539_10001257
207 Ga0081539_10024690
208 Ga0075427_10000556
209 Ga0075428_100038485
210 Ga0075428_100183198
211 Ga0075431_100136438
212 Ga0075433_10007911
213 Ga0075429_100006256
214 Ga0075429_100036131
215 Ga0075429_100064143
216 Ga0075429_100070475
217 Ga0075429_100249079
218 Ga0097620_100074721
219 Ga0111539_10016335
220 Ga0111539_10315357
221 Ga0114129_10012601
222 Ga0114129_10019688
223 Ga0114129_10029515
224 Ga0114129_10039500
225 Ga0114129_10114423
226 Ga0114129_10138122
227 Ga0114129_10252374
228 Ga0114129_10296515
229 Ga0114129_10309364
230 Ga0105242_10070878
231 Ga0105237_10331657
232 Ga0105249_10239701
233 Ga0105246_10199322
234 Ga0207684_10099427
235 Ga0207686_10103713
236 Ga0207651_10280943
237 Ga0207708_10028408
238 Ga0207674_10307202
239 Ga0268265_10059263
240 Ga0268265_10107958
241 Ga0268265_10249915
242 Ga0265318_10015526
243 Ga0265323_10029703
244 Ga0265338_10224394
245 Ga0265320_10083103
246 Ga0265340_10032253
247 Ga0265331_10041734
248 Ga0316575_10006516
249 Ga0316579_10007881
250 Ga0316579_10029295
251 Ga0316576_10005884
252 Ga0316576_10117916
253 Ga0316578_10028133
254 Ga0316578_10073475
255 Ga0316577_10000070
256 Ga0316577_10000513
257 Ga0316577_10014659
258 Ga0316577_10025939
259 Ga0316577_10027209
260 Ga0316577_10161479
261 Ga0316574_0002437
262 Ga0316574_0013183
263 Ga0316574_0017462
264 Ga0316574_0021382
265 Ga0373937_0132964
266 Ga0316582_0023086
267 Ga0316582_0026599
268 Ga0316582_0040432
269 Ga0316582_0070160
270 Ga0316582_0116286
271 Ga0316584_0001498
272 Ga0316584_0007634
273 Ga0316584_0015891
274 Ga0316584_0019930
275 Ga0316584_0022955
276 Ga0316584_0029086
277 Ga0316584_0036353
278 Ga0316584_0198342
279 Ga0316581_0010909
280 Ga0316581_0015736
281 Ga0400484_21962
282 Ga0400484_44377
283 Ga0400483_054495
284 Ga0400483_112958
285 Ga0400489_83284
286 Ga0451577_0002115
287 Ga0451577_0002972
288 Ga0451577_0017360
289 Ga0451577_0051100
290 Ga0451577_0053804
291 Ga0451577_0107851
292 Ga0453683_0001836
293 Ga0453683_0002502
294 Ga0453683_0014760
295 Ga0453683_0020980
296 Ga0453683_0034887
297 Ga0453683_0037065
298 Ga0453683_0062742
299 Ga0453683_0093419
300 Ga0453684_0000023
301 Ga0453684_0000035
302 Ga0453684_0000055
303 Ga0453684_0000420
304 Ga0453684_0000456
305 Ga0453684_0000522
306 Ga0453684_0000528
307 Ga0453684_0001722
308 Ga0453684_0001930
309 Ga0453684_0003393
310 Ga0453684_0003436
311 Ga0453684_0003688
312 Ga0453684_0004359
313 Ga0453684_0019736
314 Ga0453684_0026290
315 Ga0453684_0035554
316 Ga0453684_0037091
317 Ga0453684_0048471
318 Ga0453684_0053975
319 Ga0453684_0071722
320 Ga0453684_0078421
321 Ga0453684_0086012
322 Ga0453684_0093481
323 Ga0453684_0113860
324 Ga0453684_0115493
325 Ga0453684_0117483
326 Ga0453684_0139883
327 Ga0453684_0233645
328 Ga0453684_0243725
329 Ga0453684_0316167
330 Ga0453684_0337992
331 Ga0453684_0487589
332 Ga0453684_0588787
333 Ga0451576_0000009
334 Ga0451576_0000104
335 Ga0451576_0001403
336 Ga0451576_0007783
337 Ga0451576_0008934
338 Ga0451576_0345485
339 Ga0495630_0109987
340 Ga0501073_0183063
341 Ga0501076_0077996
342 Ga0501076_0139268
343 nmdc:mga05p37_119378_c1
344 nmdc:mga05p37_132585_c1
345 nmdc:mga05p37_175440_c1
346 nmdc:mga05p37_184613_c1
347 nmdc:mga05p37_18804_c2
348 nmdc:mga05p37_413953_c1
349 nmdc:mga05p37_6492_c1
350 nmdc:mga09592_284558_c1
351 nmdc:mga09592_5896_c1
352 nmdc:mga09592_62023_c1
353 nmdc:mga09592_64567_c1
354 nmdc:mga06r32_23523_c1
355 nmdc:mga06r32_74562_c1
356 nmdc:mga08y16_112934_c1
357 nmdc:mga0n895_83751_c1
358 nmdc:mga0a205_336985_c1
359 nmdc:mga0a205_96712_c1
360 8007374795

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01061

ABC2_membrane

ABC-2 type transporter

171

361

0.93

PF12698

ABC2_membrane_3

ABC-2 family transporter protein

40

389

0.88

PF12679

ABC2_membrane_2

ABC-2 family transporter protein

26

394

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
7roq-assembly1.cif.gz_A alternative structure of human abca1 0.743 178 372
6vxh-assembly1.cif.gz_B structure of abcg2 bound to imatinib 0.7187 184 368
7e7q-assembly1.cif.gz_A cryo-em structure of human abca4 in atp-bound state 0.7179 179 372
5njg-assembly1.cif.gz_B structure of an abc transporter: part of the structure that could be built de novo 0.7177 178 372
8dku-assembly1.cif.gz_B cryoem structure of the a. aeolicus wzmwzt transporter bound to the native o antigen 0.7095 177 372
ID Description Score Start End Superfamily
af_P0AFP9_40_168_3.40.1710.10 Alpha Beta;3-Layer(aba) Sandwich;abc type-2 transporter like fold;abc type-2 transporter like domain 0.8827 41 175 3.40.1710.10
af_P0AFP9_40_168_3.40.1710.10 Alpha Beta;3-Layer(aba) Sandwich;abc type-2 transporter like fold;abc type-2 transporter like domain 0.8701 41 175 3.40.1710.10
af_P37624_579_712_3.40.1710.10 Alpha Beta;3-Layer(aba) Sandwich;abc type-2 transporter like fold;abc type-2 transporter like domain 0.8618 41 177 3.40.1710.10
af_P37624_579_712_3.40.1710.10 Alpha Beta;3-Layer(aba) Sandwich;abc type-2 transporter like fold;abc type-2 transporter like domain 0.856 41 177 3.40.1710.10
af_Q86P18_394_773_3.40.1710.10 Alpha Beta;3-Layer(aba) Sandwich;abc type-2 transporter like fold;abc type-2 transporter like domain 0.8462 24 369 3.40.1710.10
ID Description Score Start End GO Terms
AF-A0A3N5SLJ3-F1-model_v4 deleted 0.9626 170 375
AF-A0A6G3V9P6-F1-model_v4 deleted 0.957 181 340
AF-A0A3N5SLJ3-F1-model_v4 deleted 0.9536 170 375
AF-A0A348UX11-F1-model_v4 ABC-2 type transporter transmembrane domain-containing protein 0.9486 195 370 GO:0005886
GO:0140359
AF-A0A6G3V9P6-F1-model_v4 deleted 0.9456 181 340

Map