F282403

General Info

Members Datasets Scaffolds Average Seq Length
184 136 368 434

Family's Representative Sequence

Representative Sequence 3300006871|Ga0075434_100017583|Ga0075434_1000175832
Length 462
Sequence MSDSLARGTDHARSMEEKHVTDRRGFTKSCLAAIAATVTGWPQIRLTPRHLLQPPIRVNGPRLNQSLTDLSRFGANPQGGVSRVAYSDADRDARAWIMDLMRAAKLDPRIDLAGNIVARRPGTDASAKPIVFGSHIDSVPEGGNYDGDVGSLSAIEVARTLAERGVVTRHPLEVVIFQNEEGGLVGSRAWIGEVTARDLALTSRSGKTIADGIRFIGGDPTRLAEVRRSPGDIAGYLELHIEQGGTLDREHIPIGVVEGIVGIGWWDVTVTGFANHAGTTPMNERHDALLAAAKFIELVNRTVTSEPGRQVGTVGRIQALPGAPNVIPGQVLLSLELRDLDAAKIERLYQTIAREAERIGTESGTTFTFRETNRQAPALSDPRVRGLIADAAKSLGLATKVLPSGAGHDAQDMARLGPMGMIFVPSVAGVSHAPRELTRPEDVVNGANVLLGSLLQMDRTVA

Samples

Sample ID Description Type Environment
1 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
2 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
3 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
4 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
5 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
6 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
7 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
8 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
9 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
10 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
11 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
12 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
13 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
14 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
15 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
16 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
17 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
18 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
19 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
20 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
21 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
22 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
23 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
24 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
25 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
26 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
27 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
28 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
29 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
30 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
31 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
32 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
41 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
42 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
43 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
44 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
45 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
46 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
47 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
48 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
49 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
50 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
51 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
52 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
53 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
54 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
55 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
56 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
57 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
58 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
59 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
60 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
61 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
62 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
63 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
64 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
65 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
66 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
67 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
68 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
69 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
70 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
71 3300042125 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_082716_2472 Metagenome Rhizosphere
72 3300042133 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB1023D_E14_070716_134 Metagenome Rhizosphere
73 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
74 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
75 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
76 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
77 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
78 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
79 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
80 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
81 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
82 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
83 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
84 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
85 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
86 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
87 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
88 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
89 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
90 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
91 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
92 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
93 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
94 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
95 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
96 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
97 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
98 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
99 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
100 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
101 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
102 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
103 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
104 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
105 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
106 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
107 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
108 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
109 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
110 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
111 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
112 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
113 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
114 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
115 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
116 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
117 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
118 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
119 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
120 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
121 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
122 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
123 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
124 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
125 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
126 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
127 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
128 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
129 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
130 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
131 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
132 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
133 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
134 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
135 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
136 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.54
Nodule 0
Rhizoplane 2.72
Rhizosphere 94.02
Stem 0
Stem Tuber 0
Unclassified 9.78

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075434_100017583 3300006871 Bacteria 6892
2 Ga0070668_100146861 3300005347 Bacteria 1904
3 Ga0070669_100049307 3300005353 Bacteria 3074
4 Ga0070709_10007277 3300005434 Bacteria 6066
5 Ga0070714_100001071 3300005435 Bacteria 19563
6 Ga0070714_100006447 3300005435 Bacteria 9063
7 Ga0070713_100001814 3300005436 Bacteria 13787
8 Ga0070713_100002277 3300005436 Bacteria 12475
9 Ga0070711_100170553 3300005439 Unclassified 1658
10 Ga0070694_100054209 3300005444 Bacteria 2716
11 Ga0070708_100000011 3300005445 Bacteria 134770
12 Ga0070681_10139069 3300005458 Bacteria 2358
13 Ga0070706_100136557 3300005467 Unclassified 2289
14 Ga0070706_100188958 3300005467 Unclassified 1925
15 Ga0070707_100000580 3300005468 Bacteria 36781
16 Ga0070707_100259977 3300005468 Bacteria 1689
17 Ga0070698_100047760 3300005471 Bacteria 4376
18 Ga0070699_100000101 3300005518 Bacteria 80963
19 Ga0070699_100186150 3300005518 Bacteria 1844
20 Ga0070697_100165353 3300005536 Bacteria 1871
21 Ga0070695_100040614 3300005545 Bacteria 2946
22 Ga0070696_100000394 3300005546 Bacteria 26993
23 Ga0070704_100004198 3300005549 Bacteria 8317
24 Ga0068854_100226840 3300005578 Bacteria 1481
25 Ga0068856_100008139 3300005614 Bacteria 10232
26 Ga0081539_10000131 3300005985 Bacteria 176467
27 Ga0070717_10000256 3300006028 Bacteria 36409
28 Ga0070717_10005993 3300006028 Bacteria 8903
29 Ga0070717_10149435 3300006028 Bacteria 2020
30 Ga0070717_10214083 3300006028 Bacteria 1692
31 Ga0070712_100003309 3300006175 Bacteria 9911
32 Ga0070712_100103653 3300006175 Bacteria 2109
33 Ga0075428_100002121 3300006844 Bacteria 21402
34 Ga0075430_100104218 3300006846 Bacteria 2368
35 Ga0075431_100000396 3300006847 Bacteria 35074
36 Ga0075429_100000534 3300006880 Bacteria 28938
37 Ga0075436_100072820 3300006914 Bacteria 2377
38 Ga0111539_10000632 3300009094 Bacteria 45454
39 Ga0114129_10018408 3300009147 Bacteria 9949
40 Ga0114129_10235937 3300009147 Bacteria 2461
41 Ga0114129_10521239 3300009147 Unclassified 1549
42 Ga0213876_10036722 3300021384 Bacteria 2584
43 Ga0207693_10006200 3300025915 Bacteria 9919
44 Ga0207693_10008812 3300025915 Bacteria 8242
45 Ga0207663_10164434 3300025916 Unclassified 1570
46 Ga0207646_10000345 3300025922 Bacteria 62865
47 Ga0207700_10000677 3300025928 Bacteria 19822
48 Ga0207689_10059648 3300025942 Viruses 3138
49 Ga0207661_10033546 3300025944 Bacteria 3986
50 Ga0207668_10250691 3300025972 Unclassified 1438
51 Ga0207640_10192044 3300025981 Bacteria 1540
52 Ga0207428_10008777 3300027907 Bacteria 9115
53 Ga0307408_100017298 3300031548 Bacteria 4824
54 Ga0307408_100125325 3300031548 Bacteria 1996
55 Ga0307405_10022739 3300031731 Bacteria 3550
56 Ga0307410_10057219 3300031852 Bacteria 2654
57 Ga0307406_10008986 3300031901 Bacteria 5589
58 Ga0307406_10034061 3300031901 Bacteria 3122
59 Ga0307407_10033072 3300031903 Unclassified 2818
60 Ga0307409_100032549 3300031995 Bacteria 3782
61 Ga0307416_100054255 3300032002 Unclassified 3221
62 Ga0307414_10140838 3300032004 Bacteria 1888
63 Ga0307411_10032299 3300032005 Bacteria 3232
64 Ga0307415_100011916 3300032126 Bacteria 5003
65 Ga0307415_100044663 3300032126 Unclassified 2964
66 Ga0373923_0000046 3300035111 Bacteria 18901
67 Ga0373953_0004984 3300035117 Unclassified 4278
68 Ga0373956_0005853 3300035119 Unclassified 4918
69 Ga0373943_0009686 3300035170 Bacteria 4316
70 Ga0373955_0002053 3300035172 Bacteria 8667
71 Ga0373955_0014723 3300035172 Bacteria 3813
72 Ga0373924_0081523 3300035410 Bacteria 1376
73 Ga0373935_0004724 3300035692 Bacteria 8011
74 Ga0373935_0027277 3300035692 Bacteria 3530
75 Ga0373927_0011949 3300035695 Bacteria 5778
76 Ga0373927_0032070 3300035695 Bacteria 3422
77 Ga0373933_0001269 3300035724 Bacteria 14903
78 Ga0373947_0001846 3300035725 Bacteria 12938
79 Ga0373937_0002809 3300036401 Bacteria 14555
80 Ga0373937_0003481 3300036401 Bacteria 13233
81 Ga0316584_0021810 3300036712 Bacteria 4661
82 Ga0373925_0002111 3300037068 Bacteria 16324
83 Ga0395905_0140136 3300037471 Unclassified 2275
84 Ga0436365_0798103 3300039437 Bacteria 12283
85 Ga0436360_0775635 3300039438 Bacteria 3558
86 Ga0436361_0147964 3300039447 Bacteria 6359
87 Ga0436363_0412053 3300039450 Unclassified 1785
88 Ga0436363_1439137 3300039450 Bacteria 1263
89 Ga0451791_0039681 3300041451 Bacteria 2984
90 Ga0451807_2724500 3300041486 Bacteria 1722
91 Ga0450923_012638 3300042125 Bacteria 1539
92 Ga0450896_003250 3300042133 Bacteria 2151
93 Ga0439446_0000950 3300042156 Bacteria 6281
94 Ga0439446_0022868 3300042156 Bacteria 1774
95 Ga0451577_0116369 3300042876 Bacteria 2394
96 Ga0451576_0007052 3300045051 Bacteria 13577
97 Ga0466967_0020017 3300045976 Bacteria 5397
98 Ga0495592_0002095 3300046454 Bacteria 14067
99 Ga0495629_0004288 3300046459 Bacteria 10692
100 Ga0495629_0089746 3300046459 Bacteria 2144
101 Ga0495651_0000134 3300046462 Bacteria 55066
102 Ga0495651_0013209 3300046462 Bacteria 6385
103 Ga0495653_0000320 3300046463 Bacteria 39133
104 Ga0495580_0001192 3300046472 Bacteria 22888
105 Ga0495580_0001977 3300046472 Bacteria 18016
106 Ga0495580_0034190 3300046472 Bacteria 3660
107 Ga0495639_0000590 3300046475 Bacteria 16919
108 Ga0495616_0011935 3300046513 Bacteria 4948
109 Ga0495630_0000727 3300046517 Bacteria 23238
110 Ga0495630_0063184 3300046517 Unclassified 2781
111 Ga0495652_0002510 3300046529 Bacteria 18831
112 Ga0495665_0002701 3300046531 Bacteria 9562
113 Ga0495586_0022247 3300046535 Bacteria 3382
114 Ga0495586_0066823 3300046535 Unclassified 1960
115 Ga0495587_0000936 3300046536 Bacteria 19195
116 Ga0495587_0002408 3300046536 Bacteria 12468
117 Ga0495645_0000112 3300046543 Bacteria 55222
118 Ga0495645_0000329 3300046543 Bacteria 33749
119 Ga0495667_0005123 3300046559 Bacteria 8854
120 Ga0495667_0009401 3300046559 Bacteria 6621
121 Ga0495625_0056458 3300046660 Bacteria 2795
122 Ga0495635_0004603 3300046663 Bacteria 9566
123 Ga0495588_0000694 3300046674 Bacteria 15524
124 Ga0495657_0002822 3300046675 Bacteria 14430
125 Ga0495599_0000302 3300046678 Bacteria 29865
126 Ga0495599_0005410 3300046678 Bacteria 7627
127 Ga0495623_0001723 3300046679 Bacteria 14698
128 Ga0495623_0003472 3300046679 Bacteria 10436
129 Ga0495646_0000191 3300046680 Bacteria 30599
130 Ga0495658_0000404 3300046683 Bacteria 24181
131 Ga0495658_0109576 3300046683 Bacteria 1659
132 Ga0495613_0009427 3300046689 Bacteria 7241
133 Ga0495613_0064473 3300046689 Unclassified 2679
134 Ga0495600_0001084 3300046809 Bacteria 14805
135 Ga0495581_0007055 3300047315 Bacteria 6512
136 Ga0495604_0000682 3300047317 Bacteria 28755
137 Ga0495674_0005587 3300047319 Bacteria 12057
138 Ga0495674_0011908 3300047319 Bacteria 8200
139 Ga0495680_0004492 3300047322 Bacteria 13337
140 Ga0495675_0017286 3300047444 Bacteria 4569
141 Ga0495675_0022556 3300047444 Bacteria 4013
142 Ga0495684_0000467 3300047471 Bacteria 33033
143 Ga0495593_0001067 3300047673 Bacteria 15996
144 Ga0495602_0014976 3300048088 Bacteria 7843
145 Ga0495614_0000758 3300048089 Bacteria 13681
146 Ga0496101_0088251 3300048904 Bacteria 2303
147 Ga0496114_0061203 3300048917 Unclassified 3148
148 Ga0496115_0115572 3300048918 Unclassified 2206
149 Ga0496126_0004844 3300048929 Bacteria 15769
150 Ga0501036_0021098 3300049572 Bacteria 5472
151 Ga0501038_0016520 3300049574 Bacteria 6690
152 Ga0501048_0029141 3300049582 Bacteria 4005
153 Ga0501071_0008858 3300049587 Bacteria 6671
154 Ga0501075_0003958 3300049591 Bacteria 9984
155 Ga0501075_0025220 3300049591 Bacteria 4368
156 Ga0501075_0231772 3300049591 Bacteria 1408
157 Ga0501076_0006810 3300049592 Bacteria 8292
158 Ga0501077_0013865 3300049593 Bacteria 5053
159 Ga0501077_0016556 3300049593 Bacteria 4645
160 Ga0501079_0004410 3300049741 Bacteria 10421
161 Ga0501079_0210469 3300049741 Bacteria 1519
162 Ga0501080_0009234 3300049742 Bacteria 8988
163 Ga0501081_0002791 3300049743 Bacteria 11081
164 Ga0501081_0016486 3300049743 Bacteria 4885
165 Ga0501081_0044820 3300049743 Bacteria 3037
166 Ga0501035_0168344 3300049822 Bacteria 1894
167 Ga0501045_0015431 3300049824 Bacteria 5420
168 Ga0501045_0051754 3300049824 Bacteria 2997
169 nmdc:mga05p37_11927_c1 3300050507 Bacteria 10363
170 nmdc:mga05p37_16115_c1 3300050507 Bacteria 8998
171 nmdc:mga05p37_199501_c1 3300050507 Bacteria 2424
172 nmdc:mga09592_1056_c1 3300050508 Bacteria 21845
173 nmdc:mga09592_3117_c1 3300050508 Bacteria 13465
174 nmdc:mga0qj67_77561_c1 3300050509 Bacteria 2658
175 nmdc:mga06r32_13799_c1 3300050510 Bacteria 7329
176 nmdc:mga06r32_554_c1 3300050510 Bacteria 32497
177 nmdc:mga08y16_1029_c1 3300050511 Bacteria 27344
178 nmdc:mga0n895_78402_c1 3300050512 Bacteria 3288
179 Ga0495612_0003020 3300053078 Bacteria 6978
180 Ga0495619_0002449 3300053085 Bacteria 12152
181 Ga0500637_0096965 3300053178 Bacteria 1709
182 Ga0501084_0031930 3300054114 Bacteria 4404
183 Ga0501084_0237810 3300054114 Bacteria 1537
184 Ga0530510_0004923 3300061734 Bacteria 9226
185 Ga0075434_100017583
186 Ga0070668_100146861
187 Ga0070669_100049307
188 Ga0070709_10007277
189 Ga0070714_100001071
190 Ga0070714_100006447
191 Ga0070713_100001814
192 Ga0070713_100002277
193 Ga0070711_100170553
194 Ga0070694_100054209
195 Ga0070708_100000011
196 Ga0070681_10139069
197 Ga0070706_100136557
198 Ga0070706_100188958
199 Ga0070707_100000580
200 Ga0070707_100259977
201 Ga0070698_100047760
202 Ga0070699_100000101
203 Ga0070699_100186150
204 Ga0070697_100165353
205 Ga0070695_100040614
206 Ga0070696_100000394
207 Ga0070704_100004198
208 Ga0068854_100226840
209 Ga0068856_100008139
210 Ga0081539_10000131
211 Ga0070717_10000256
212 Ga0070717_10005993
213 Ga0070717_10149435
214 Ga0070717_10214083
215 Ga0070712_100003309
216 Ga0070712_100103653
217 Ga0075428_100002121
218 Ga0075430_100104218
219 Ga0075431_100000396
220 Ga0075429_100000534
221 Ga0075436_100072820
222 Ga0111539_10000632
223 Ga0114129_10018408
224 Ga0114129_10235937
225 Ga0114129_10521239
226 Ga0213876_10036722
227 Ga0207693_10006200
228 Ga0207693_10008812
229 Ga0207663_10164434
230 Ga0207646_10000345
231 Ga0207700_10000677
232 Ga0207689_10059648
233 Ga0207661_10033546
234 Ga0207668_10250691
235 Ga0207640_10192044
236 Ga0207428_10008777
237 Ga0307408_100017298
238 Ga0307408_100125325
239 Ga0307405_10022739
240 Ga0307410_10057219
241 Ga0307406_10008986
242 Ga0307406_10034061
243 Ga0307407_10033072
244 Ga0307409_100032549
245 Ga0307416_100054255
246 Ga0307414_10140838
247 Ga0307411_10032299
248 Ga0307415_100011916
249 Ga0307415_100044663
250 Ga0373923_0000046
251 Ga0373953_0004984
252 Ga0373956_0005853
253 Ga0373943_0009686
254 Ga0373955_0002053
255 Ga0373955_0014723
256 Ga0373924_0081523
257 Ga0373935_0004724
258 Ga0373935_0027277
259 Ga0373927_0011949
260 Ga0373927_0032070
261 Ga0373933_0001269
262 Ga0373947_0001846
263 Ga0373937_0002809
264 Ga0373937_0003481
265 Ga0316584_0021810
266 Ga0373925_0002111
267 Ga0395905_0140136
268 Ga0436365_0798103
269 Ga0436360_0775635
270 Ga0436361_0147964
271 Ga0436363_0412053
272 Ga0436363_1439137
273 Ga0451791_0039681
274 Ga0451807_2724500
275 Ga0450923_012638
276 Ga0450896_003250
277 Ga0439446_0000950
278 Ga0439446_0022868
279 Ga0451577_0116369
280 Ga0451576_0007052
281 Ga0466967_0020017
282 Ga0495592_0002095
283 Ga0495629_0004288
284 Ga0495629_0089746
285 Ga0495651_0000134
286 Ga0495651_0013209
287 Ga0495653_0000320
288 Ga0495580_0001192
289 Ga0495580_0001977
290 Ga0495580_0034190
291 Ga0495639_0000590
292 Ga0495616_0011935
293 Ga0495630_0000727
294 Ga0495630_0063184
295 Ga0495652_0002510
296 Ga0495665_0002701
297 Ga0495586_0022247
298 Ga0495586_0066823
299 Ga0495587_0000936
300 Ga0495587_0002408
301 Ga0495645_0000112
302 Ga0495645_0000329
303 Ga0495667_0005123
304 Ga0495667_0009401
305 Ga0495625_0056458
306 Ga0495635_0004603
307 Ga0495588_0000694
308 Ga0495657_0002822
309 Ga0495599_0000302
310 Ga0495599_0005410
311 Ga0495623_0001723
312 Ga0495623_0003472
313 Ga0495646_0000191
314 Ga0495658_0000404
315 Ga0495658_0109576
316 Ga0495613_0009427
317 Ga0495613_0064473
318 Ga0495600_0001084
319 Ga0495581_0007055
320 Ga0495604_0000682
321 Ga0495674_0005587
322 Ga0495674_0011908
323 Ga0495680_0004492
324 Ga0495675_0017286
325 Ga0495675_0022556
326 Ga0495684_0000467
327 Ga0495593_0001067
328 Ga0495602_0014976
329 Ga0495614_0000758
330 Ga0496101_0088251
331 Ga0496114_0061203
332 Ga0496115_0115572
333 Ga0496126_0004844
334 Ga0501036_0021098
335 Ga0501038_0016520
336 Ga0501048_0029141
337 Ga0501071_0008858
338 Ga0501075_0003958
339 Ga0501075_0025220
340 Ga0501075_0231772
341 Ga0501076_0006810
342 Ga0501077_0013865
343 Ga0501077_0016556
344 Ga0501079_0004410
345 Ga0501079_0210469
346 Ga0501080_0009234
347 Ga0501081_0002791
348 Ga0501081_0016486
349 Ga0501081_0044820
350 Ga0501035_0168344
351 Ga0501045_0015431
352 Ga0501045_0051754
353 nmdc:mga05p37_11927_c1
354 nmdc:mga05p37_16115_c1
355 nmdc:mga05p37_199501_c1
356 nmdc:mga09592_1056_c1
357 nmdc:mga09592_3117_c1
358 nmdc:mga0qj67_77561_c1
359 nmdc:mga06r32_13799_c1
360 nmdc:mga06r32_554_c1
361 nmdc:mga08y16_1029_c1
362 nmdc:mga0n895_78402_c1
363 Ga0495612_0003020
364 Ga0495619_0002449
365 Ga0500637_0096965
366 Ga0501084_0031930
367 Ga0501084_0237810
368 Ga0530510_0004923

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01546

Peptidase_M20

Peptidase family M20/M25/M40

131

456

0.94

PF04389

Peptidase_M28

Peptidase family M28

115

203

0.93

PF07687

M20_dimer

Peptidase dimerisation domain

259

363

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
3n5f-assembly1.cif.gz_B crystal structure of l-n-carbamoylase from geobacillus stearothermophilus cect43 0.9541 31 432
3n5f-assembly1.cif.gz_B crystal structure of l-n-carbamoylase from geobacillus stearothermophilus cect43 0.9426 31 432
2imo-assembly1.cif.gz_B crystal structure of allantoate amidohydrolase from escherichia coli at ph 4.6 0.925 32 432
5thw-assembly2.cif.gz_D crystal structure of amidase, hydantoinase/carbamoylase family from burkholderia multivorans 0.9219 28 431
8c46-assembly1.cif.gz_B n-carbamoyl-beta-alanine amidohydrolases from rhizobium radiobacter mdc 8606 0.9208 28 433
ID Description Score Start End Superfamily
3n5fB02 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.9634 238 348 3.30.70.360
5tp4B02 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.96 238 350 3.30.70.360
af_C0P5R8_269_385_3.40.630.10 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Zn peptidases 0.9472 238 348 3.40.630.10
5i4mA02 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.9442 238 348 3.30.70.360
5tp4B02 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.936 238 350 3.30.70.360
ID Description Score Start End GO Terms
AF-C0BIA5-F1-model_v4 deleted 0.9751 27 215
AF-A0A435XPF7-F1-model_v4 Hydantoinase/carbamoylase family amidase (EC 3.5.-.-) 0.9707 206 436 GO:0016813
AF-A0A661FNI4-F1-model_v4 Zn-dependent hydrolase 0.9638 25 435 GO:0016813
GO:0046872
AF-A0A658A644-F1-model_v4 deleted 0.9603 203 433
AF-A0A3D0Q9T1-F1-model_v4 Zn-dependent hydrolase 0.9596 196 429 GO:0016813

Map