F281901

General Info

Members Datasets Scaffolds Average Seq Length
184 119 368 610

Family's Representative Sequence

Representative Sequence 3300005327|Ga0070658_10106396|Ga0070658_101063961
Length 630
Sequence MARKLPGLRRELDARALFSVAYGEIASSIYFALGVLAASALGFTPLVLLLVGGLFLIVSLSYAEGTAALPETGGAATFVRRALNDLAGFMTGWALFLDYLIVIALSALFLPHYLSGALQVRALDHKPWDIVVAVCVIALVALVRVLRRPSLYGLGIVIPALDLLTQLLLVALGFALLFSPHALAHGTSLGSHPTWHALAFSLPLAMLAFTGLETVANLAEEARRPGVDLPRSVFGGIATVVTMYVAIAIVALSAFPGPQTALGGQWIRAPLLGVATSIRAQLPYWIGTPLRFYVGVTGALILLAAVTTSISGFSRLAYSLGEHGQLPRSFGRLSRRANVSPLAIGAAAVVSSGIVVATSFFHDDVKFLASLFSFGVLLAFTAAQLAVIKLRIDEPALARPYRAPFNITIRGAEIPLPAVVGSIATFAVFVIAMATHPGARYAGPVWLAIGLVVFVAVRSSHGEGLMERVTADDERPVGEAMHVHRILVPMKLGIIGEEMLATAVKLASEHSAEVQALHVIRVPLEQALDAQMLEEDERADAALAEAKLLGADHGVVVEGTTVRARAIGSAIVERALEVDADLIVLGSAPRWRRQSRFFSPTVDYVLRRAPCEVLIVAFPQSVMDEELAAT

Samples

Sample ID Description Type Environment
1 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
2 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
3 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
4 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
5 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
6 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
7 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
8 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
9 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
10 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
11 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
12 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
13 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
14 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
15 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
16 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
17 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
18 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
19 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
20 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
21 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
22 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
23 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
24 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
25 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
32 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
33 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
34 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
35 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
36 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
37 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
38 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
39 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
40 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
41 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
42 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
43 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
44 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
45 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
46 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
47 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
48 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
49 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
50 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
51 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
52 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
53 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
54 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
55 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
56 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
57 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
58 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
59 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
60 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
61 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
62 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
63 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
64 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
65 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
66 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
67 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
68 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
69 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
70 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
71 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
72 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
73 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
74 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
75 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
76 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
77 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
78 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
79 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
80 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
81 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
82 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
83 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
84 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
85 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
86 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
87 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
88 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
89 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
90 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
91 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
92 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
93 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
94 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
95 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
96 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
97 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
98 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
99 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
100 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
101 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
102 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
103 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
104 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
105 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
106 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
107 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
108 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
109 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
110 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
111 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
112 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
113 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
114 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
115 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
116 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
117 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
118 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
119 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.37
Metatranscriptomes 1.63
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 19.02
Rhizosphere 80.43
Stem 0
Stem Tuber 0
Unclassified 1.09

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070658_10106396 3300005327 Bacteria 2321
2 Ga0070680_100014546 3300005336 Bacteria 6156
3 Ga0070660_100004061 3300005339 Bacteria 10096
4 Ga0070660_100005287 3300005339 Bacteria 8930
5 Ga0070660_100016112 3300005339 Bacteria 5419
6 Ga0070661_100009512 3300005344 Bacteria 6733
7 Ga0070671_100007854 3300005355 Bacteria 8529
8 Ga0070667_100005662 3300005367 Bacteria 10434
9 Ga0070710_10059129 3300005437 Bacteria 2176
10 Ga0070681_10020662 3300005458 Bacteria 6596
11 Ga0070681_10021481 3300005458 Bacteria 6471
12 Ga0070681_10082555 3300005458 Bacteria 3169
13 Ga0070679_100003250 3300005530 Bacteria 14854
14 Ga0070684_100024104 3300005535 Bacteria 5101
15 Ga0070684_100046085 3300005535 Bacteria 3777
16 Ga0068855_100064240 3300005563 Bacteria 4280
17 Ga0068855_100068713 3300005563 Bacteria 4124
18 Ga0068857_100008907 3300005577 Bacteria 8693
19 Ga0068857_100010502 3300005577 Bacteria 8048
20 Ga0068852_100012936 3300005616 Bacteria 6364
21 Ga0081539_10004859 3300005985 Bacteria 14370
22 Ga0070717_10008482 3300006028 Bacteria 7676
23 Ga0075434_100034101 3300006871 Bacteria 5025
24 Ga0105240_10163736 3300009093 Bacteria 2639
25 Ga0105243_10030950 3300009148 Bacteria 4124
26 Ga0157369_10095275 3300013105 Bacteria 3176
27 Ga0157374_10140730 3300013296 Bacteria 2342
28 Ga0206354_10650624 3300020081 Bacteria 3159
29 Ga0206354_11703666 3300020081 Bacteria 2278
30 Ga0206353_10301773 3300020082 Bacteria 3570
31 Ga0207705_10009261 3300025909 Bacteria 7164
32 Ga0207705_10045794 3300025909 Bacteria 3143
33 Ga0207707_10001636 3300025912 Bacteria 20667
34 Ga0207663_10013684 3300025916 Bacteria 4417
35 Ga0207657_10010091 3300025919 Bacteria 9442
36 Ga0207657_10015964 3300025919 Bacteria 7253
37 Ga0207657_10074274 3300025919 Bacteria 2871
38 Ga0207652_10110254 3300025921 Bacteria 2440
39 Ga0207700_10022010 3300025928 Bacteria 4366
40 Ga0207667_10040638 3300025949 Bacteria 4953
41 Ga0207667_10122067 3300025949 Bacteria 2684
42 Ga0207667_10133746 3300025949 Bacteria 2554
43 Ga0207667_10184992 3300025949 Bacteria 2139
44 Ga0207658_10004204 3300025986 Bacteria 10031
45 Ga0207674_10010386 3300026116 Bacteria 10552
46 Ga0207674_10047081 3300026116 Bacteria 4423
47 Ga0207698_10101171 3300026142 Bacteria 2389
48 Ga0265338_10005891 3300028800 Bacteria 15808
49 Ga0265320_10008525 3300031240 Bacteria 6268
50 Ga0265325_10007179 3300031241 Bacteria 6701
51 Ga0265340_10021747 3300031247 Bacteria 3287
52 Ga0265327_10002344 3300031251 Bacteria 20191
53 Ga0265327_10019228 3300031251 Bacteria 4207
54 Ga0265316_10004722 3300031344 Bacteria 13494
55 Ga0265313_10001477 3300031595 Bacteria 21902
56 Ga0265314_10007233 3300031711 Bacteria 9650
57 Ga0373944_0004199 3300035089 Bacteria 3745
58 Ga0373945_0000860 3300035116 Bacteria 8948
59 Ga0373943_0000798 3300035170 Bacteria 13824
60 Ga0373927_0017057 3300035695 Bacteria 4785
61 Ga0373927_0038491 3300035695 Bacteria 3105
62 Ga0373933_0009086 3300035724 Bacteria 5425
63 Ga0373947_0002355 3300035725 Bacteria 11424
64 Ga0373947_0008569 3300035725 Bacteria 5888
65 Ga0373925_0008694 3300037068 Bacteria 7396
66 Ga0373925_0061648 3300037068 Bacteria 2817
67 Ga0395900_0094806 3300037418 Bacteria 3066
68 Ga0395900_0096249 3300037418 Bacteria 3041
69 Ga0395900_0111832 3300037418 Bacteria 2805
70 Ga0395898_0004839 3300037466 Bacteria 14637
71 Ga0395898_0006680 3300037466 Bacteria 12302
72 Ga0395905_0099639 3300037471 Bacteria 2729
73 Ga0395901_0002250 3300038443 Bacteria 19691
74 Ga0395901_0050197 3300038443 Bacteria 4335
75 Ga0395901_0089168 3300038443 Bacteria 3227
76 Ga0395901_0158070 3300038443 Bacteria 2380
77 Ga0436365_0026111 3300039437 Bacteria 3612
78 Ga0436360_1161098 3300039438 Bacteria 7397
79 Ga0436362_0937017 3300039453 Bacteria 6117
80 Ga0466965_0010975 3300044683 Bacteria 4237
81 Ga0466963_0006120 3300044694 Bacteria 7096
82 Ga0466963_0007603 3300044694 Bacteria 6470
83 Ga0466963_0008550 3300044694 Bacteria 6143
84 Ga0466963_0015146 3300044694 Bacteria 4769
85 Ga0466964_0008392 3300044706 Bacteria 3881
86 Ga0466971_0000690 3300044719 Bacteria 13513
87 Ga0466970_0036891 3300044765 Bacteria 2590
88 Ga0466959_0003221 3300045049 Bacteria 10615
89 Ga0466959_0043074 3300045049 Bacteria 3329
90 Ga0466959_0062373 3300045049 Bacteria 2709
91 Ga0466958_0008704 3300045836 Bacteria 5634
92 Ga0466967_0002211 3300045976 Bacteria 11962
93 Ga0466967_0027243 3300045976 Bacteria 4751
94 Ga0466967_0032696 3300045976 Bacteria 4396
95 Ga0466967_0043952 3300045976 Bacteria 3871
96 Ga0466967_0079957 3300045976 Bacteria 2948
97 Ga0466967_0080730 3300045976 Bacteria 2936
98 Ga0466967_0091405 3300045976 Bacteria 2766
99 Ga0495592_0042949 3300046454 Bacteria 3385
100 Ga0495629_0000322 3300046459 Bacteria 41005
101 Ga0495641_0000172 3300046461 Bacteria 48876
102 Ga0495651_0009103 3300046462 Bacteria 7621
103 Ga0495653_0069467 3300046463 Bacteria 2639
104 Ga0495653_0089793 3300046463 Bacteria 2250
105 Ga0495582_0000478 3300046473 Bacteria 21920
106 Ga0495639_0000669 3300046475 Bacteria 15781
107 Ga0495662_0003052 3300046476 Bacteria 8444
108 Ga0495664_0021809 3300046477 Bacteria 3702
109 Ga0495618_0062335 3300046514 Bacteria 2366
110 Ga0495630_0021548 3300046517 Bacteria 4758
111 Ga0495665_0000711 3300046531 Bacteria 17155
112 Ga0495586_0019998 3300046535 Bacteria 3567
113 Ga0495667_0051808 3300046559 Bacteria 2706
114 Ga0495635_0075857 3300046663 Bacteria 2303
115 Ga0495646_0058731 3300046680 Unclassified 2299
116 Ga0495647_0003717 3300046681 Bacteria 4903
117 Ga0495658_0001142 3300046683 Bacteria 14028
118 Ga0495613_0002165 3300046689 Bacteria 14898
119 Ga0495624_0016345 3300046690 Bacteria 4994
120 Ga0495581_0007685 3300047315 Bacteria 6236
121 Ga0495604_0058756 3300047317 Bacteria 2952
122 Ga0495674_0019771 3300047319 Bacteria 6244
123 Ga0495674_0137691 3300047319 Unclassified 2053
124 Ga0495676_0004852 3300047321 Bacteria 12336
125 Ga0495676_0039242 3300047321 Bacteria 3924
126 Ga0495675_0026548 3300047444 Bacteria 3693
127 Ga0495684_0002259 3300047471 Bacteria 15438
128 Ga0495684_0002946 3300047471 Bacteria 13414
129 Ga0495684_0014709 3300047471 Bacteria 6024
130 Ga0495684_0038290 3300047471 Bacteria 3678
131 Ga0495593_0011094 3300047673 Bacteria 5183
132 Ga0495614_0002176 3300048089 Bacteria 8680
133 Ga0496100_0001948 3300048903 Bacteria 10329
134 Ga0496100_0009726 3300048903 Bacteria 5411
135 Ga0496101_0005006 3300048904 Bacteria 8416
136 Ga0496102_0001373 3300048905 Bacteria 21702
137 Ga0496103_0019691 3300048906 Bacteria 4051
138 Ga0496104_0004670 3300048907 Bacteria 11920
139 Ga0496104_0015102 3300048907 Bacteria 6989
140 Ga0496104_0027835 3300048907 Bacteria 5233
141 Ga0496104_0065186 3300048907 Bacteria 3456
142 Ga0496105_0000466 3300048908 Bacteria 26582
143 Ga0496105_0005952 3300048908 Bacteria 9309
144 Ga0496105_0042274 3300048908 Bacteria 3756
145 Ga0496105_0088312 3300048908 Bacteria 2561
146 Ga0496106_0001707 3300048909 Bacteria 16398
147 Ga0496106_0023039 3300048909 Bacteria 4625
148 Ga0496107_0002960 3300048910 Bacteria 11247
149 Ga0496108_0003292 3300048911 Bacteria 12976
150 Ga0496109_0000847 3300048912 Bacteria 25593
151 Ga0496109_0038177 3300048912 Bacteria 4341
152 Ga0496109_0065358 3300048912 Bacteria 3330
153 Ga0496110_0004434 3300048913 Bacteria 10880
154 Ga0496110_0166701 3300048913 Bacteria 1998
155 Ga0496111_0008782 3300048914 Bacteria 6711
156 Ga0496112_0015728 3300048915 Bacteria 7067
157 Ga0496112_0033388 3300048915 Bacteria 5003
158 Ga0496112_0100928 3300048915 Bacteria 2855
159 Ga0496112_0155634 3300048915 Bacteria 2252
160 Ga0496113_0061936 3300048916 Bacteria 2824
161 Ga0496114_0000954 3300048917 Bacteria 21635
162 Ga0496114_0012301 3300048917 Bacteria 6847
163 Ga0496114_0020459 3300048917 Bacteria 5372
164 Ga0496114_0150269 3300048917 Bacteria 2020
165 Ga0496115_0001782 3300048918 Bacteria 15400
166 Ga0496115_0006519 3300048918 Bacteria 8556
167 Ga0496115_0014642 3300048918 Bacteria 5940
168 Ga0501034_0101112 3300049571 Bacteria 2877
169 Ga0501047_0013632 3300049581 Bacteria 7713
170 Ga0501047_0074742 3300049581 Bacteria 3262
171 Ga0501067_0006811 3300049583 Bacteria 6337
172 Ga0501069_0008796 3300049585 Bacteria 5319
173 Ga0501069_0056265 3300049585 Bacteria 2191
174 Ga0501070_0000865 3300049586 Bacteria 27548
175 Ga0501070_0109046 3300049586 Bacteria 2287
176 Ga0501072_0061016 3300049588 Bacteria 2973
177 Ga0501074_0015551 3300049590 Bacteria 5531
178 Ga0501077_0006070 3300049593 Bacteria 7373
179 Ga0501080_0158288 3300049742 Bacteria 2092
180 nmdc:mga0n895_23799_c1 3300050512 Bacteria 5762
181 Ga0495595_0021555 3300053084 Bacteria 2816
182 Ga0495619_0001119 3300053085 Bacteria 17601
183 Ga0495619_0003282 3300053085 Bacteria 10457
184 Ga0466962_0004884 3300061719 Bacteria 6446
185 Ga0070658_10106396
186 Ga0070680_100014546
187 Ga0070660_100004061
188 Ga0070660_100005287
189 Ga0070660_100016112
190 Ga0070661_100009512
191 Ga0070671_100007854
192 Ga0070667_100005662
193 Ga0070710_10059129
194 Ga0070681_10020662
195 Ga0070681_10021481
196 Ga0070681_10082555
197 Ga0070679_100003250
198 Ga0070684_100024104
199 Ga0070684_100046085
200 Ga0068855_100064240
201 Ga0068855_100068713
202 Ga0068857_100008907
203 Ga0068857_100010502
204 Ga0068852_100012936
205 Ga0081539_10004859
206 Ga0070717_10008482
207 Ga0075434_100034101
208 Ga0105240_10163736
209 Ga0105243_10030950
210 Ga0157369_10095275
211 Ga0157374_10140730
212 Ga0206354_10650624
213 Ga0206354_11703666
214 Ga0206353_10301773
215 Ga0207705_10009261
216 Ga0207705_10045794
217 Ga0207707_10001636
218 Ga0207663_10013684
219 Ga0207657_10010091
220 Ga0207657_10015964
221 Ga0207657_10074274
222 Ga0207652_10110254
223 Ga0207700_10022010
224 Ga0207667_10040638
225 Ga0207667_10122067
226 Ga0207667_10133746
227 Ga0207667_10184992
228 Ga0207658_10004204
229 Ga0207674_10010386
230 Ga0207674_10047081
231 Ga0207698_10101171
232 Ga0265338_10005891
233 Ga0265320_10008525
234 Ga0265325_10007179
235 Ga0265340_10021747
236 Ga0265327_10002344
237 Ga0265327_10019228
238 Ga0265316_10004722
239 Ga0265313_10001477
240 Ga0265314_10007233
241 Ga0373944_0004199
242 Ga0373945_0000860
243 Ga0373943_0000798
244 Ga0373927_0017057
245 Ga0373927_0038491
246 Ga0373933_0009086
247 Ga0373947_0002355
248 Ga0373947_0008569
249 Ga0373925_0008694
250 Ga0373925_0061648
251 Ga0395900_0094806
252 Ga0395900_0096249
253 Ga0395900_0111832
254 Ga0395898_0004839
255 Ga0395898_0006680
256 Ga0395905_0099639
257 Ga0395901_0002250
258 Ga0395901_0050197
259 Ga0395901_0089168
260 Ga0395901_0158070
261 Ga0436365_0026111
262 Ga0436360_1161098
263 Ga0436362_0937017
264 Ga0466965_0010975
265 Ga0466963_0006120
266 Ga0466963_0007603
267 Ga0466963_0008550
268 Ga0466963_0015146
269 Ga0466964_0008392
270 Ga0466971_0000690
271 Ga0466970_0036891
272 Ga0466959_0003221
273 Ga0466959_0043074
274 Ga0466959_0062373
275 Ga0466958_0008704
276 Ga0466967_0002211
277 Ga0466967_0027243
278 Ga0466967_0032696
279 Ga0466967_0043952
280 Ga0466967_0079957
281 Ga0466967_0080730
282 Ga0466967_0091405
283 Ga0495592_0042949
284 Ga0495629_0000322
285 Ga0495641_0000172
286 Ga0495651_0009103
287 Ga0495653_0069467
288 Ga0495653_0089793
289 Ga0495582_0000478
290 Ga0495639_0000669
291 Ga0495662_0003052
292 Ga0495664_0021809
293 Ga0495618_0062335
294 Ga0495630_0021548
295 Ga0495665_0000711
296 Ga0495586_0019998
297 Ga0495667_0051808
298 Ga0495635_0075857
299 Ga0495646_0058731
300 Ga0495647_0003717
301 Ga0495658_0001142
302 Ga0495613_0002165
303 Ga0495624_0016345
304 Ga0495581_0007685
305 Ga0495604_0058756
306 Ga0495674_0019771
307 Ga0495674_0137691
308 Ga0495676_0004852
309 Ga0495676_0039242
310 Ga0495675_0026548
311 Ga0495684_0002259
312 Ga0495684_0002946
313 Ga0495684_0014709
314 Ga0495684_0038290
315 Ga0495593_0011094
316 Ga0495614_0002176
317 Ga0496100_0001948
318 Ga0496100_0009726
319 Ga0496101_0005006
320 Ga0496102_0001373
321 Ga0496103_0019691
322 Ga0496104_0004670
323 Ga0496104_0015102
324 Ga0496104_0027835
325 Ga0496104_0065186
326 Ga0496105_0000466
327 Ga0496105_0005952
328 Ga0496105_0042274
329 Ga0496105_0088312
330 Ga0496106_0001707
331 Ga0496106_0023039
332 Ga0496107_0002960
333 Ga0496108_0003292
334 Ga0496109_0000847
335 Ga0496109_0038177
336 Ga0496109_0065358
337 Ga0496110_0004434
338 Ga0496110_0166701
339 Ga0496111_0008782
340 Ga0496112_0015728
341 Ga0496112_0033388
342 Ga0496112_0100928
343 Ga0496112_0155634
344 Ga0496113_0061936
345 Ga0496114_0000954
346 Ga0496114_0012301
347 Ga0496114_0020459
348 Ga0496114_0150269
349 Ga0496115_0001782
350 Ga0496115_0006519
351 Ga0496115_0014642
352 Ga0501034_0101112
353 Ga0501047_0013632
354 Ga0501047_0074742
355 Ga0501067_0006811
356 Ga0501069_0008796
357 Ga0501069_0056265
358 Ga0501070_0000865
359 Ga0501070_0109046
360 Ga0501072_0061016
361 Ga0501074_0015551
362 Ga0501077_0006070
363 Ga0501080_0158288
364 nmdc:mga0n895_23799_c1
365 Ga0495595_0021555
366 Ga0495619_0001119
367 Ga0495619_0003282
368 Ga0466962_0004884

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00582

Usp

Universal stress protein family

482

617

0.95

PF13520

AA_permease_2

Amino acid permease

12

457

0.81

PF00324

AA_permease

Amino acid permease

20

460

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
5ahw-assembly1.cif.gz_B crystal structure of universal stress protein msmeg_3811 in complex with camp 0.8644 482 617
3ab7-assembly2.cif.gz_A crystal structure of the hypothetical tandem-type universal stress protein ttha0350 from thermus thermophilus hb8 0.8633 485 617
5ahw-assembly2.cif.gz_D crystal structure of universal stress protein msmeg_3811 in complex with camp 0.8579 482 617
5ahw-assembly3.cif.gz_E crystal structure of universal stress protein msmeg_3811 in complex with camp 0.854 482 616
6hcd-assembly2.cif.gz_D structure of universal stress protein from archaeoglobus fulgidus 0.8481 484 615
ID Description Score Start End Superfamily
af_P77400_8_430_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.8685 7 462 1.20.1740.10
af_A0A0B4KHK8_45_488_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.8681 8 465 1.20.1740.10
af_P77400_8_430_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.8647 7 462 1.20.1740.10
5ahwB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8644 482 617 3.40.50.620
3loqB02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8545 485 617 3.40.50.620
ID Description Score Start End GO Terms
AF-A0A382L9U8-F1-model_v4 UspA domain-containing protein 0.9138 484 618
AF-A0A535BQB8-F1-model_v4 Universal stress protein 0.9016 481 618
AF-A0A7X7JR34-F1-model_v4 Universal stress protein 0.8999 481 618
AF-A0A536AN20-F1-model_v4 Universal stress protein 0.8956 473 581
AF-A0A7X7PLK3-F1-model_v4 Universal stress protein 0.8899 526 619

Map