F281395

General Info

Members Datasets Scaffolds Average Seq Length
183 129 366 245

Family's Representative Sequence

Representative Sequence 3300046678|Ga0495599_0094455|Ga0495599_0094455_807_1676
Length 281
Sequence MRDRNPAVSLTAKRSYRDRCQPCRGGRYDLARSARGQRALTVVEPAAVVVRIGTCGWSYGHWQPELYAPGLPAAARLARYAAAFPTAELNSSFYHWPRPKLPDGFRLSVKAPRGLTHGRRLYAPETWIQRIGAGWHELGAKRAVLLAQLAPSHTRDDARLAYFLQQVPGWIRVSAEFRHPSWHCGEVFALLEAHGAAYCVMSGANLPCILRATTDFTYVRMHGPDHHHLYTGSYSDTDLMWWAGRIREWDAADKDLFVYFNNDGNANAVRNARTLQALLDQ

Samples

Sample ID Description Type Environment
1 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
2 3300000549 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJQ_Illumina_Assembled Metagenome Rhizosphere
3 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
4 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
5 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
6 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
7 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
8 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
9 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
10 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
11 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
12 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
13 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
14 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
15 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
16 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
17 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
18 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
19 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
20 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
21 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
22 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
23 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
24 3300024225 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU5 Metagenome Rhizosphere
25 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
33 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
34 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
35 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
36 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
37 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
38 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
39 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
40 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
41 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
42 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
43 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
44 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
45 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
46 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
47 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
48 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
49 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
50 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
51 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
52 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
53 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
54 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
55 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
56 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
57 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
58 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
59 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
60 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
61 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
62 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
63 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
64 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
65 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
66 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
67 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
68 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
69 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
70 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
71 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
72 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
73 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
74 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
75 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
76 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
77 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
78 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
79 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
80 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
81 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
82 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
83 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
84 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
85 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
86 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
87 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
88 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
89 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
90 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
91 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
92 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
93 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
94 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
95 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
96 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
97 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
98 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
99 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
100 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
101 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
102 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
103 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
104 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
105 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
106 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
107 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
108 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
109 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
110 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
111 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
112 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
113 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
114 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
115 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
116 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
117 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
118 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
119 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
120 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
121 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
122 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
123 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
124 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
125 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
126 2619618881 Frankia sp. ACN1ag Isolate Unclassified
127 2626541554 Frankia sp. AvcI.1 Isolate Nodule
128 2643221566 Microbacterium sp. Root166 Isolate Unclassified
129 2821268502 Microbacterium sp. YT0620BN Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 97.81
Metatranscriptomes 0
Isolates 2.19

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.55
Nodule 0.55
Rhizoplane 6.56
Rhizosphere 86.89
Stem 0
Stem Tuber 0
Unclassified 9.84

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495599_0094455 3300046678 Bacteria 1865
2 LJQas_1000242 3300000549 Bacteria 10018
3 JGI25406J46586_10000017 3300003203 Bacteria 90811
4 Ga0065714_10005010 3300005288 Bacteria 4238
5 Ga0070682_100214268 3300005337 Bacteria 1367
6 Ga0070682_100295326 3300005337 Bacteria 1187
7 Ga0070682_100328389 3300005337 Bacteria 1132
8 Ga0068868_100233653 3300005338 Bacteria 1543
9 Ga0070688_100485574 3300005365 Bacteria 929
10 Ga0070714_100021100 3300005435 Bacteria 5325
11 Ga0070714_100182051 3300005435 Unclassified 1912
12 Ga0070713_100038038 3300005436 Bacteria 3895
13 Ga0070713_100060901 3300005436 Bacteria 3156
14 Ga0070710_10005839 3300005437 Bacteria 5873
15 Ga0070711_100016964 3300005439 Bacteria 4630
16 Ga0070684_100341233 3300005535 Unclassified 1377
17 Ga0070664_100484138 3300005564 Bacteria 1139
18 Ga0068863_100608299 3300005841 Unclassified 1082
19 Ga0081539_10000053 3300005985 Bacteria 264549
20 Ga0070717_10045458 3300006028 Bacteria 3590
21 Ga0070716_100442639 3300006173 Unclassified 945
22 Ga0070712_100160496 3300006175 Unclassified 1735
23 Ga0075436_100386083 3300006914 Unclassified 1013
24 Ga0105245_10512220 3300009098 Bacteria 1217
25 Ga0105243_10302748 3300009148 Bacteria 1450
26 Ga0105238_10137687 3300009551 Bacteria 2419
27 Ga0213875_10000831 3300021388 Bacteria 22919
28 Ga0213875_10006516 3300021388 Bacteria 6115
29 Ga0224572_1011114 3300024225 Unclassified 1701
30 Ga0207688_10301147 3300025901 Bacteria 980
31 Ga0207693_10136283 3300025915 Unclassified 1930
32 Ga0207693_10170563 3300025915 Bacteria 1714
33 Ga0207700_10015660 3300025928 Bacteria 5011
34 Ga0207664_10005163 3300025929 Bacteria 8897
35 Ga0207664_10024786 3300025929 Bacteria 4511
36 Ga0207665_10222313 3300025939 Unclassified 1384
37 Ga0207661_10127671 3300025944 Bacteria 2174
38 Ga0207683_10072135 3300026121 Bacteria 3054
39 Ga0307408_100722602 3300031548 Bacteria 897
40 Ga0307405_10102409 3300031731 Bacteria 1923
41 Ga0307405_10416312 3300031731 Bacteria 1056
42 Ga0307413_10018411 3300031824 Bacteria 3664
43 Ga0307410_10028854 3300031852 Bacteria 3525
44 Ga0307410_10100315 3300031852 Bacteria 2074
45 Ga0307406_10019158 3300031901 Bacteria 4014
46 Ga0307407_10016240 3300031903 Bacteria 3702
47 Ga0307407_10121237 3300031903 Bacteria 1658
48 Ga0307407_10224861 3300031903 Bacteria 1271
49 Ga0307412_10057308 3300031911 Bacteria 2600
50 Ga0307409_100030332 3300031995 Bacteria 3883
51 Ga0307409_100054082 3300031995 Bacteria 3089
52 Ga0373934_0009012 3300035086 Bacteria 3730
53 Ga0373936_0025269 3300035113 Unclassified 2322
54 Ga0373945_0035944 3300035116 Bacteria 1773
55 Ga0373945_0078139 3300035116 Bacteria 1264
56 Ga0373954_0041210 3300035118 Bacteria 2153
57 Ga0373957_0129361 3300035120 Bacteria 1027
58 Ga0373957_0166347 3300035120 Bacteria 910
59 Ga0373955_0050392 3300035172 Bacteria 2264
60 Ga0373935_0123055 3300035692 Bacteria 1735
61 Ga0373933_0008100 3300035724 Bacteria 5735
62 Ga0373933_0061466 3300035724 Bacteria 2266
63 Ga0373947_0068936 3300035725 Bacteria 2164
64 Ga0373947_0305169 3300035725 Bacteria 1062
65 Ga0373937_0035567 3300036401 Bacteria 4534
66 Ga0373937_0830031 3300036401 Bacteria 872
67 Ga0373925_0107270 3300037068 Bacteria 2154
68 Ga0395900_0095598 3300037418 Bacteria 3053
69 Ga0395905_0244098 3300037471 Bacteria 1678
70 Ga0436364_0764179 3300037853 Bacteria 57419
71 Ga0436364_0788964 3300037853 Bacteria 15201
72 Ga0395901_0374806 3300038443 Bacteria 1466
73 Ga0436365_0715051 3300039437 Bacteria 48440
74 Ga0436361_0223980 3300039447 Bacteria 993
75 Ga0436363_0256391 3300039450 Bacteria 855
76 Ga0439436_0012963 3300041404 Bacteria 2527
77 Ga0439466_0020662 3300041411 Bacteria 2345
78 Ga0439433_0004971 3300041999 Bacteria 2855
79 Ga0439445_0061354 3300042004 Bacteria 1029
80 Ga0439457_007948 3300042014 Bacteria 2520
81 Ga0466966_0073461 3300044684 Bacteria 2139
82 Ga0466966_0152178 3300044684 Bacteria 1411
83 Ga0466966_0224181 3300044684 Bacteria 1134
84 Ga0466961_0045261 3300044693 Bacteria 2815
85 Ga0466963_0010989 3300044694 Bacteria 5504
86 Ga0466968_0047443 3300044735 Bacteria 1826
87 Ga0466957_0107731 3300044842 Bacteria 1764
88 Ga0466957_0177364 3300044842 Bacteria 1390
89 Ga0466960_0224135 3300044901 Bacteria 1036
90 Ga0466959_0024034 3300045049 Bacteria 4512
91 Ga0466967_0095144 3300045976 Bacteria 2714
92 Ga0466967_0193552 3300045976 Bacteria 1923
93 Ga0466967_0921986 3300045976 Bacteria 869
94 Ga0495592_0069336 3300046454 Bacteria 2571
95 Ga0495592_0117146 3300046454 Bacteria 1879
96 Ga0495641_0018186 3300046461 Bacteria 3634
97 Ga0495651_0006689 3300046462 Bacteria 8810
98 Ga0495651_0146126 3300046462 Bacteria 1709
99 Ga0495653_0020439 3300046463 Bacteria 5368
100 Ga0495653_0032693 3300046463 Bacteria 4129
101 Ga0495582_0043164 3300046473 Bacteria 2483
102 Ga0495662_0002751 3300046476 Bacteria 8890
103 Ga0495662_0197879 3300046476 Bacteria 991
104 Ga0495664_0007871 3300046477 Bacteria 5932
105 Ga0495664_0015747 3300046477 Unclassified 4303
106 Ga0495594_0023811 3300046499 Bacteria 3283
107 Ga0495608_0189362 3300046511 Bacteria 1299
108 Ga0495608_0402823 3300046511 Bacteria 836
109 Ga0495618_0040365 3300046514 Unclassified 2937
110 Ga0495618_0296778 3300046514 Bacteria 1005
111 Ga0495628_0057821 3300046516 Unclassified 3050
112 Ga0495630_0073717 3300046517 Bacteria 2571
113 Ga0495630_0249926 3300046517 Bacteria 1355
114 Ga0495652_0034235 3300046529 Unclassified 4428
115 Ga0495665_0000494 3300046531 Bacteria 19851
116 Ga0495640_0098933 3300046533 Bacteria 1917
117 Ga0495586_0122113 3300046535 Bacteria 1455
118 Ga0495587_0004927 3300046536 Bacteria 8749
119 Ga0495587_0039266 3300046536 Unclassified 2834
120 Ga0495621_0064361 3300046539 Bacteria 1338
121 Ga0495645_0000930 3300046543 Bacteria 19929
122 Ga0495645_0051457 3300046543 Bacteria 2997
123 Ga0495667_0008817 3300046559 Bacteria 6858
124 Ga0495667_0010390 3300046559 Bacteria 6300
125 Ga0495667_0216640 3300046559 Bacteria 1223
126 Ga0495667_0242942 3300046559 Bacteria 1146
127 Ga0495667_0254811 3300046559 Bacteria 1117
128 Ga0495634_0030053 3300046642 Bacteria 3756
129 Ga0495635_0097017 3300046663 Bacteria 2015
130 Ga0495635_0099148 3300046663 Bacteria 1991
131 Ga0495635_0182855 3300046663 Bacteria 1424
132 Ga0495588_0048294 3300046674 Bacteria 2186
133 Ga0495588_0097094 3300046674 Bacteria 1546
134 Ga0495657_0011884 3300046675 Bacteria 6489
135 Ga0495657_0044894 3300046675 Bacteria 3001
136 Ga0495623_0061564 3300046679 Bacteria 2353
137 Ga0495646_0026093 3300046680 Bacteria 3670
138 Ga0495646_0216276 3300046680 Bacteria 1038
139 Ga0495624_0047944 3300046690 Bacteria 2713
140 Ga0495600_0012645 3300046809 Bacteria 5283
141 Ga0495600_0013214 3300046809 Bacteria 5183
142 Ga0495600_0064474 3300046809 Bacteria 2395
143 Ga0495581_0025381 3300047315 Bacteria 3435
144 Ga0495581_0176832 3300047315 Bacteria 1248
145 Ga0495604_0045760 3300047317 Unclassified 3414
146 Ga0495604_0073430 3300047317 Bacteria 2582
147 Ga0495674_0037684 3300047319 Bacteria 4344
148 Ga0495674_0111901 3300047319 Bacteria 2314
149 Ga0495680_0043321 3300047322 Bacteria 3565
150 Ga0495675_0007694 3300047444 Bacteria 6645
151 Ga0495675_0008346 3300047444 Bacteria 6413
152 Ga0495675_0320224 3300047444 Bacteria 917
153 Ga0495684_0068180 3300047471 Bacteria 2705
154 Ga0495684_0082959 3300047471 Bacteria 2431
155 Ga0495593_0051370 3300047673 Bacteria 2182
156 Ga0495593_0061150 3300047673 Bacteria 1970
157 Ga0495602_0024808 3300048088 Bacteria 5813
158 Ga0496101_0186348 3300048904 Bacteria 1600
159 Ga0496102_0098166 3300048905 Bacteria 2718
160 Ga0496102_0442852 3300048905 Bacteria 1219
161 Ga0496103_0029541 3300048906 Bacteria 3332
162 Ga0496105_0037954 3300048908 Bacteria 3968
163 Ga0496108_0005198 3300048911 Bacteria 10518
164 Ga0496108_0013671 3300048911 Bacteria 6627
165 Ga0496109_0058487 3300048912 Bacteria 3521
166 Ga0496111_0145589 3300048914 Bacteria 1756
167 Ga0496112_0023229 3300048915 Bacteria 5920
168 Ga0496114_0069838 3300048917 Bacteria 2950
169 Ga0496114_0288099 3300048917 Bacteria 1449
170 Ga0496126_0626416 3300048929 Bacteria 845
171 Ga0501067_0141159 3300049583 Bacteria 1341
172 Ga0501068_0338571 3300049584 Bacteria 966
173 Ga0501044_0337332 3300049823 Bacteria 1429
174 nmdc:mga08x19_245883_c1 3300050514 Unclassified 1234
175 Ga0495601_0382125 3300053077 Bacteria 914
176 Ga0495612_0189636 3300053078 Unclassified 905
177 Ga0495619_0017443 3300053085 Bacteria 4544
178 Ga0500573_0095783 3300053140 Bacteria 1673
179 Ga0466962_0057246 3300061719 Bacteria 1861
180 2619856959 2619618881 Bacteria 7521104
181 2626638935 2626541554 Bacteria 7741902
182 2643847868 2643221566 Bacteria 3460379
183 2821268704 2821268502 Bacteria 3750023
184 Ga0495599_0094455
185 LJQas_1000242
186 JGI25406J46586_10000017
187 Ga0065714_10005010
188 Ga0070682_100214268
189 Ga0070682_100295326
190 Ga0070682_100328389
191 Ga0068868_100233653
192 Ga0070688_100485574
193 Ga0070714_100021100
194 Ga0070714_100182051
195 Ga0070713_100038038
196 Ga0070713_100060901
197 Ga0070710_10005839
198 Ga0070711_100016964
199 Ga0070684_100341233
200 Ga0070664_100484138
201 Ga0068863_100608299
202 Ga0081539_10000053
203 Ga0070717_10045458
204 Ga0070716_100442639
205 Ga0070712_100160496
206 Ga0075436_100386083
207 Ga0105245_10512220
208 Ga0105243_10302748
209 Ga0105238_10137687
210 Ga0213875_10000831
211 Ga0213875_10006516
212 Ga0224572_1011114
213 Ga0207688_10301147
214 Ga0207693_10136283
215 Ga0207693_10170563
216 Ga0207700_10015660
217 Ga0207664_10005163
218 Ga0207664_10024786
219 Ga0207665_10222313
220 Ga0207661_10127671
221 Ga0207683_10072135
222 Ga0307408_100722602
223 Ga0307405_10102409
224 Ga0307405_10416312
225 Ga0307413_10018411
226 Ga0307410_10028854
227 Ga0307410_10100315
228 Ga0307406_10019158
229 Ga0307407_10016240
230 Ga0307407_10121237
231 Ga0307407_10224861
232 Ga0307412_10057308
233 Ga0307409_100030332
234 Ga0307409_100054082
235 Ga0373934_0009012
236 Ga0373936_0025269
237 Ga0373945_0035944
238 Ga0373945_0078139
239 Ga0373954_0041210
240 Ga0373957_0129361
241 Ga0373957_0166347
242 Ga0373955_0050392
243 Ga0373935_0123055
244 Ga0373933_0008100
245 Ga0373933_0061466
246 Ga0373947_0068936
247 Ga0373947_0305169
248 Ga0373937_0035567
249 Ga0373937_0830031
250 Ga0373925_0107270
251 Ga0395900_0095598
252 Ga0395905_0244098
253 Ga0436364_0764179
254 Ga0436364_0788964
255 Ga0395901_0374806
256 Ga0436365_0715051
257 Ga0436361_0223980
258 Ga0436363_0256391
259 Ga0439436_0012963
260 Ga0439466_0020662
261 Ga0439433_0004971
262 Ga0439445_0061354
263 Ga0439457_007948
264 Ga0466966_0073461
265 Ga0466966_0152178
266 Ga0466966_0224181
267 Ga0466961_0045261
268 Ga0466963_0010989
269 Ga0466968_0047443
270 Ga0466957_0107731
271 Ga0466957_0177364
272 Ga0466960_0224135
273 Ga0466959_0024034
274 Ga0466967_0095144
275 Ga0466967_0193552
276 Ga0466967_0921986
277 Ga0495592_0069336
278 Ga0495592_0117146
279 Ga0495641_0018186
280 Ga0495651_0006689
281 Ga0495651_0146126
282 Ga0495653_0020439
283 Ga0495653_0032693
284 Ga0495582_0043164
285 Ga0495662_0002751
286 Ga0495662_0197879
287 Ga0495664_0007871
288 Ga0495664_0015747
289 Ga0495594_0023811
290 Ga0495608_0189362
291 Ga0495608_0402823
292 Ga0495618_0040365
293 Ga0495618_0296778
294 Ga0495628_0057821
295 Ga0495630_0073717
296 Ga0495630_0249926
297 Ga0495652_0034235
298 Ga0495665_0000494
299 Ga0495640_0098933
300 Ga0495586_0122113
301 Ga0495587_0004927
302 Ga0495587_0039266
303 Ga0495621_0064361
304 Ga0495645_0000930
305 Ga0495645_0051457
306 Ga0495667_0008817
307 Ga0495667_0010390
308 Ga0495667_0216640
309 Ga0495667_0242942
310 Ga0495667_0254811
311 Ga0495634_0030053
312 Ga0495635_0097017
313 Ga0495635_0099148
314 Ga0495635_0182855
315 Ga0495588_0048294
316 Ga0495588_0097094
317 Ga0495657_0011884
318 Ga0495657_0044894
319 Ga0495623_0061564
320 Ga0495646_0026093
321 Ga0495646_0216276
322 Ga0495624_0047944
323 Ga0495600_0012645
324 Ga0495600_0013214
325 Ga0495600_0064474
326 Ga0495581_0025381
327 Ga0495581_0176832
328 Ga0495604_0045760
329 Ga0495604_0073430
330 Ga0495674_0037684
331 Ga0495674_0111901
332 Ga0495680_0043321
333 Ga0495675_0007694
334 Ga0495675_0008346
335 Ga0495675_0320224
336 Ga0495684_0068180
337 Ga0495684_0082959
338 Ga0495593_0051370
339 Ga0495593_0061150
340 Ga0495602_0024808
341 Ga0496101_0186348
342 Ga0496102_0098166
343 Ga0496102_0442852
344 Ga0496103_0029541
345 Ga0496105_0037954
346 Ga0496108_0005198
347 Ga0496108_0013671
348 Ga0496109_0058487
349 Ga0496111_0145589
350 Ga0496112_0023229
351 Ga0496114_0069838
352 Ga0496114_0288099
353 Ga0496126_0626416
354 Ga0501067_0141159
355 Ga0501068_0338571
356 Ga0501044_0337332
357 nmdc:mga08x19_245883_c1
358 Ga0495601_0382125
359 Ga0495612_0189636
360 Ga0495619_0017443
361 Ga0500573_0095783
362 Ga0466962_0057246
363 2619856959
364 2626638935
365 2643847868
366 2821268704

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01904

DUF72

Protein of unknown function DUF72

67

278

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
1vpq-assembly1.cif.gz_A crystal structure of a duf72 family protein (tm1631) from thermotoga maritima msb8 at 2.20 a resolution 0.9038 1 241
1vpq-assembly1.cif.gz_A crystal structure of a duf72 family protein (tm1631) from thermotoga maritima msb8 at 2.20 a resolution 0.8933 1 241
1ztv-assembly1.cif.gz_B crystal structure of a duf72 family protein (ef0366) from enterococcus faecalis v583 at 3.10 a resolution 0.8711 3 241
1ztv-assembly1.cif.gz_B crystal structure of a duf72 family protein (ef0366) from enterococcus faecalis v583 at 3.10 a resolution 0.8542 3 241
1vpy-assembly1.cif.gz_A crystal structure of a duf72 family protein (ef0366) from enterococcus faecalis v583 at 2.52 a resolution 0.7837 2 241
ID Description Score Start End Superfamily
1vpqA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Protein of unknown function UPF0759 0.9038 1 241 3.20.20.410
af_Q2FZX7_1_282_3.20.20.410 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Protein of unknown function UPF0759 0.8942 3 241 3.20.20.410
1vpqA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Protein of unknown function UPF0759 0.8933 1 241 3.20.20.410
af_Q4E4B4_140_369_3.20.20.410 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Protein of unknown function UPF0759 0.892 67 242 3.20.20.410
af_Q2FZX7_1_282_3.20.20.410 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Protein of unknown function UPF0759 0.8767 3 241 3.20.20.410
ID Description Score Start End GO Terms
AF-A0A1T5GGN4-F1-model_v4 Uncharacterized conserved protein YecE, DUF72 family 0.9983 2 241
AF-A0A0Q1E542-F1-model_v4 Sensor histidine kinase 0.9979 1 241 GO:0016301
AF-A0A7Y9MIW5-F1-model_v4 Uncharacterized protein YecE (DUF72 family) 0.9954 3 240
AF-A0A4Q5ZRU7-F1-model_v4 DUF72 domain-containing protein 0.9929 88 240
AF-A0A1V3XEM9-F1-model_v4 DUF72 domain-containing protein 0.9901 1 157

Map