F281277

General Info

Members Datasets Scaffolds Average Seq Length
183 118 366 317

Family's Representative Sequence

Representative Sequence 3300044694|Ga0466963_0037229|Ga0466963_0037229_1693_2718
Length 341
Sequence VITIWAPDGVGEVRRGDDLAEHLLAAAGADLAQGDVVCVTSKVVSKAEGRVVAGDRDEAVARETRRLVARRGSLAVVVNRLGLTLAAAGVDASNVEAGHVVLLPEDPDRSARALRAAIAARRGVGVAVLVTDTAGRPWREGQTDIAIGAAGLKVVDDHAGRVDPYGNPLVVTAPAVADELAGAAELASRKLGRRPFVVVRGCADLVLPAGDDGPGAAALLRPEAADMFGLGSREAVLTALRGTTDERRLFGTPAEPEELRDLLTGLLTLPAGSEPPVEVSIVSEAVEVGSLDPRTRWVVEVAAYAHGWEVAGDTATGVRLLPGRVRSGQPGPRPGAGRPGS

Samples

Sample ID Description Type Environment
1 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
8 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
9 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
10 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
11 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
12 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
13 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
14 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
15 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
16 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
17 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
18 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
19 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
20 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
21 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
22 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
23 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
24 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
25 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
26 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
27 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
28 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
29 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
30 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
31 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
32 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
33 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
34 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
35 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
36 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
37 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
38 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
52 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
53 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
54 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
55 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
56 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
57 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
58 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
59 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
60 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
61 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
62 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
63 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
64 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
65 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
66 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
67 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
68 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
69 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
70 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
71 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
72 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
73 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
74 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
75 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
76 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
77 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
78 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
79 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
80 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
81 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
82 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
83 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
84 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
85 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
86 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
87 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
88 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
89 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
90 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
91 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
92 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
93 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
94 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
95 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
96 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
97 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
98 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
99 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
100 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
101 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
102 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
103 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
104 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
105 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
106 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
107 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
108 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
109 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
110 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
111 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
112 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
113 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
114 2643221561 Nocardioides sp. Root151 Isolate Unclassified
115 2643221641 Nocardioides sp. Root122 Isolate Unclassified
116 2643221696 Nocardioides sp. Root140 Isolate Unclassified
117 2738541305 Nocardioides sp. CF167 Isolate Unclassified
118 2739367898 Nocardioides sp. CF479 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 96.72
Metatranscriptomes 0.55
Isolates 2.73

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.92
Nodule 0
Rhizoplane 12.02
Rhizosphere 79.23
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0466963_0037229 3300044694 Bacteria 3176
2 rootH2_10161327 3300003320 Bacteria 2074
3 Ga0070658_10019209 3300005327 Bacteria 5475
4 Ga0070658_10051492 3300005327 Bacteria 3337
5 Ga0070658_10087604 3300005327 Bacteria 2563
6 Ga0070683_100000255 3300005329 Bacteria 36630
7 Ga0070683_100011326 3300005329 Bacteria 7703
8 Ga0070683_100023219 3300005329 Bacteria 5546
9 Ga0070683_100272718 3300005329 Bacteria 1609
10 Ga0070683_100312624 3300005329 Bacteria 1495
11 Ga0070670_100236446 3300005331 Bacteria 1590
12 Ga0070680_100088324 3300005336 Bacteria 2564
13 Ga0070682_100125765 3300005337 Bacteria 1728
14 Ga0070660_100001151 3300005339 Bacteria 17850
15 Ga0070660_100101497 3300005339 Bacteria 2280
16 Ga0070660_100241913 3300005339 Bacteria 1470
17 Ga0070659_100061155 3300005366 Bacteria 2976
18 Ga0070667_100098268 3300005367 Bacteria 2526
19 Ga0070663_100041284 3300005455 Bacteria 3235
20 Ga0070678_100134947 3300005456 Bacteria 1967
21 Ga0070698_100302574 3300005471 Bacteria 1530
22 Ga0070679_100055949 3300005530 Bacteria 3929
23 Ga0070684_100116019 3300005535 Bacteria 2405
24 Ga0070686_100140277 3300005544 Bacteria 1682
25 Ga0070665_100036709 3300005548 Bacteria 4928
26 Ga0068855_100013566 3300005563 Bacteria 9827
27 Ga0070664_100326633 3300005564 Bacteria 1391
28 Ga0070702_100051534 3300005615 Bacteria 2356
29 Ga0068852_100122993 3300005616 Bacteria 2379
30 Ga0068861_100143613 3300005719 Bacteria 1951
31 Ga0068860_100037707 3300005843 Bacteria 4626
32 Ga0075365_10012842 3300006038 Bacteria 4990
33 Ga0075365_10174387 3300006038 Bacteria 1502
34 Ga0075365_10219619 3300006038 Bacteria 1333
35 Ga0075364_10022240 3300006051 Bacteria 4002
36 Ga0075364_10073369 3300006051 Bacteria 2256
37 Ga0068871_100215702 3300006358 Bacteria 1661
38 Ga0068865_100089828 3300006881 Bacteria 2226
39 Ga0105245_10002342 3300009098 Bacteria 17132
40 Ga0105243_10092062 3300009148 Bacteria 2499
41 Ga0105243_10588986 3300009148 Bacteria 1069
42 Ga0105239_10004561 3300010375 Bacteria 16514
43 Ga0105239_10014136 3300010375 Bacteria 8859
44 Ga0105239_10468463 3300010375 Bacteria 1430
45 Ga0105246_10010076 3300011119 Bacteria 5833
46 Ga0163162_10044747 3300013306 Bacteria 4434
47 Ga0157372_10132187 3300013307 Bacteria 2872
48 Ga0157372_10562113 3300013307 Bacteria 1330
49 Ga0157372_10814622 3300013307 Bacteria 1084
50 Ga0157375_10127536 3300013308 Bacteria 2661
51 Ga0157375_10182370 3300013308 Bacteria 2251
52 Ga0163163_10060206 3300014325 Bacteria 3759
53 Ga0182006_1073259 3300015261 Bacteria 1264
54 Ga0206353_11914994 3300020082 Bacteria 2094
55 Ga0207688_10033831 3300025901 Bacteria 2828
56 Ga0207647_10018744 3300025904 Bacteria 4671
57 Ga0207647_10047038 3300025904 Bacteria 2685
58 Ga0207660_10092959 3300025917 Bacteria 2240
59 Ga0207657_10003077 3300025919 Bacteria 17844
60 Ga0207657_10110090 3300025919 Bacteria 2275
61 Ga0207657_10153295 3300025919 Bacteria 1875
62 Ga0207652_10050125 3300025921 Bacteria 3576
63 Ga0207706_10110267 3300025933 Bacteria 2421
64 Ga0207704_10061964 3300025938 Bacteria 2323
65 Ga0207661_10004744 3300025944 Bacteria 9523
66 Ga0207661_10010911 3300025944 Bacteria 6560
67 Ga0207661_10116513 3300025944 Bacteria 2268
68 Ga0207661_10232933 3300025944 Bacteria 1632
69 Ga0207679_10013111 3300025945 Bacteria 5427
70 Ga0207658_10193338 3300025986 Bacteria 1693
71 Ga0207678_10015105 3300026067 Bacteria 6792
72 Ga0207683_10101322 3300026121 Bacteria 2571
73 Ga0268266_10002962 3300028379 Bacteria 17512
74 Ga0307410_10289575 3300031852 Bacteria 1288
75 Ga0307412_10123376 3300031911 Bacteria 1869
76 Ga0307416_100196512 3300032002 Bacteria 1909
77 Ga0307414_10051623 3300032004 Bacteria 2856
78 Ga0395899_0026639 3300037312 Bacteria 4362
79 Ga0395900_0015082 3300037418 Bacteria 7879
80 Ga0436365_1333380 3300039437 Bacteria 2552
81 Ga0466969_0041756 3300044656 Bacteria 2293
82 Ga0466966_0047339 3300044684 Bacteria 2742
83 Ga0466961_0031649 3300044693 Bacteria 3401
84 Ga0466964_0026428 3300044706 Bacteria 2272
85 Ga0466971_0005120 3300044719 Bacteria 5678
86 Ga0466970_0069119 3300044765 Bacteria 1898
87 Ga0466959_0011191 3300045049 Bacteria 6435
88 Ga0451576_0162323 3300045051 Bacteria 2332
89 Ga0466967_0022396 3300045976 Bacteria 5153
90 Ga0466967_0075096 3300045976 Bacteria 3037
91 Ga0466967_0123266 3300045976 Bacteria 2398
92 Ga0495658_0180518 3300046683 Bacteria 1309
93 Ga0495613_0074934 3300046689 Bacteria 2464
94 Ga0496100_0057322 3300048903 Bacteria 2551
95 Ga0496100_0074987 3300048903 Bacteria 2268
96 Ga0496101_0283456 3300048904 Bacteria 1295
97 Ga0496102_0111260 3300048905 Bacteria 2553
98 Ga0496103_0090449 3300048906 Bacteria 1931
99 Ga0496103_0101177 3300048906 Bacteria 1824
100 Ga0496104_0007462 3300048907 Bacteria 9665
101 Ga0496105_0005589 3300048908 Bacteria 9555
102 Ga0496107_0036469 3300048910 Bacteria 3527
103 Ga0496107_0056217 3300048910 Bacteria 2843
104 Ga0496108_0076839 3300048911 Bacteria 2823
105 Ga0496110_0052349 3300048913 Bacteria 3588
106 Ga0496110_0066324 3300048913 Bacteria 3192
107 Ga0496111_0045896 3300048914 Bacteria 3145
108 Ga0496113_0031811 3300048916 Bacteria 3832
109 Ga0496113_0053234 3300048916 Bacteria 3026
110 Ga0496114_0000460 3300048917 Bacteria 29879
111 Ga0496114_0003493 3300048917 Bacteria 12071
112 Ga0496114_0243545 3300048917 Bacteria 1582
113 Ga0496115_0033134 3300048918 Bacteria 4077
114 Ga0496115_0059775 3300048918 Bacteria 3070
115 Ga0496115_0077844 3300048918 Bacteria 2697
116 Ga0501031_0007347 3300049568 Bacteria 7185
117 Ga0501031_0046343 3300049568 Bacteria 2835
118 Ga0501031_0110137 3300049568 Bacteria 1798
119 Ga0501032_0133024 3300049569 Bacteria 1640
120 Ga0501033_0079326 3300049570 Bacteria 2409
121 Ga0501036_0039374 3300049572 Bacteria 4000
122 Ga0501036_0066389 3300049572 Bacteria 3052
123 Ga0501036_0101213 3300049572 Bacteria 2438
124 Ga0501037_0027812 3300049573 Bacteria 4179
125 Ga0501038_0118944 3300049574 Bacteria 2181
126 Ga0501039_0107037 3300049575 Bacteria 2184
127 Ga0501039_0117420 3300049575 Bacteria 2083
128 Ga0501039_0189055 3300049575 Bacteria 1620
129 Ga0501040_0014737 3300049576 Bacteria 5157
130 Ga0501040_0062053 3300049576 Bacteria 2571
131 Ga0501041_0010138 3300049577 Bacteria 5552
132 Ga0501042_0021015 3300049578 Bacteria 4545
133 Ga0501042_0051962 3300049578 Bacteria 2923
134 Ga0501042_0233825 3300049578 Bacteria 1326
135 Ga0501043_0091539 3300049579 Bacteria 2391
136 Ga0501047_0442895 3300049581 Bacteria 1129
137 Ga0501048_0002026 3300049582 Bacteria 15389
138 Ga0501048_0046519 3300049582 Bacteria 3097
139 Ga0501067_0013124 3300049583 Bacteria 4585
140 Ga0501069_0020268 3300049585 Bacteria 3602
141 Ga0501069_0045895 3300049585 Bacteria 2422
142 Ga0501069_0065507 3300049585 Bacteria 2032
143 Ga0501070_0020158 3300049586 Bacteria 5592
144 Ga0501070_0043953 3300049586 Bacteria 3717
145 Ga0501070_0111251 3300049586 Bacteria 2264
146 Ga0501070_0148862 3300049586 Bacteria 1932
147 Ga0501071_0017740 3300049587 Bacteria 4915
148 Ga0501071_0091831 3300049587 Bacteria 2230
149 Ga0501071_0097083 3300049587 Bacteria 2169
150 Ga0501071_0188587 3300049587 Bacteria 1546
151 Ga0501072_0070790 3300049588 Bacteria 2755
152 Ga0501073_0019259 3300049589 Bacteria 4930
153 Ga0501074_0015265 3300049590 Bacteria 5582
154 Ga0501074_0027344 3300049590 Bacteria 4136
155 Ga0501074_0038581 3300049590 Bacteria 3461
156 Ga0501075_0087790 3300049591 Bacteria 2357
157 Ga0501075_0221434 3300049591 Bacteria 1443
158 Ga0501076_0003614 3300049592 Bacteria 10863
159 Ga0501076_0224274 3300049592 Bacteria 1536
160 Ga0501077_0011755 3300049593 Bacteria 5473
161 Ga0501077_0022918 3300049593 Bacteria 3958
162 Ga0501079_0033630 3300049741 Bacteria 3944
163 Ga0501079_0083084 3300049741 Bacteria 2478
164 Ga0501080_0014080 3300049742 Bacteria 7362
165 Ga0501080_0024796 3300049742 Bacteria 5562
166 Ga0501081_0046306 3300049743 Bacteria 2989
167 Ga0501081_0088460 3300049743 Bacteria 2176
168 Ga0501044_0232202 3300049823 Bacteria 1792
169 Ga0501044_0377938 3300049823 Bacteria 1332
170 Ga0501045_0014285 3300049824 Bacteria 5627
171 Ga0501045_0042077 3300049824 Bacteria 3326
172 Ga0501045_0230492 3300049824 Bacteria 1379
173 nmdc:mga00v17_30277_c1 3300050491 Bacteria 3184
174 nmdc:mga00v17_38655_c1 3300050491 Bacteria 2854
175 nmdc:mga00v17_74776_c1 3300050491 Bacteria 2106
176 nmdc:mga0yw44_38584_c1 3300050492 Bacteria 2828
177 Ga0501082_0004395 3300060353 Bacteria 12308
178 Ga0466962_0036072 3300061719 Bacteria 2366
179 2643824059 2643221561 Bacteria 4984412
180 2644231518 2643221641 Bacteria 4490190
181 2644533366 2643221696 Bacteria 5431823
182 2738870659 2738541305 Bacteria 4910150
183 2740167400 2739367898 Bacteria 4367674
184 Ga0466963_0037229
185 rootH2_10161327
186 Ga0070658_10019209
187 Ga0070658_10051492
188 Ga0070658_10087604
189 Ga0070683_100000255
190 Ga0070683_100011326
191 Ga0070683_100023219
192 Ga0070683_100272718
193 Ga0070683_100312624
194 Ga0070670_100236446
195 Ga0070680_100088324
196 Ga0070682_100125765
197 Ga0070660_100001151
198 Ga0070660_100101497
199 Ga0070660_100241913
200 Ga0070659_100061155
201 Ga0070667_100098268
202 Ga0070663_100041284
203 Ga0070678_100134947
204 Ga0070698_100302574
205 Ga0070679_100055949
206 Ga0070684_100116019
207 Ga0070686_100140277
208 Ga0070665_100036709
209 Ga0068855_100013566
210 Ga0070664_100326633
211 Ga0070702_100051534
212 Ga0068852_100122993
213 Ga0068861_100143613
214 Ga0068860_100037707
215 Ga0075365_10012842
216 Ga0075365_10174387
217 Ga0075365_10219619
218 Ga0075364_10022240
219 Ga0075364_10073369
220 Ga0068871_100215702
221 Ga0068865_100089828
222 Ga0105245_10002342
223 Ga0105243_10092062
224 Ga0105243_10588986
225 Ga0105239_10004561
226 Ga0105239_10014136
227 Ga0105239_10468463
228 Ga0105246_10010076
229 Ga0163162_10044747
230 Ga0157372_10132187
231 Ga0157372_10562113
232 Ga0157372_10814622
233 Ga0157375_10127536
234 Ga0157375_10182370
235 Ga0163163_10060206
236 Ga0182006_1073259
237 Ga0206353_11914994
238 Ga0207688_10033831
239 Ga0207647_10018744
240 Ga0207647_10047038
241 Ga0207660_10092959
242 Ga0207657_10003077
243 Ga0207657_10110090
244 Ga0207657_10153295
245 Ga0207652_10050125
246 Ga0207706_10110267
247 Ga0207704_10061964
248 Ga0207661_10004744
249 Ga0207661_10010911
250 Ga0207661_10116513
251 Ga0207661_10232933
252 Ga0207679_10013111
253 Ga0207658_10193338
254 Ga0207678_10015105
255 Ga0207683_10101322
256 Ga0268266_10002962
257 Ga0307410_10289575
258 Ga0307412_10123376
259 Ga0307416_100196512
260 Ga0307414_10051623
261 Ga0395899_0026639
262 Ga0395900_0015082
263 Ga0436365_1333380
264 Ga0466969_0041756
265 Ga0466966_0047339
266 Ga0466961_0031649
267 Ga0466964_0026428
268 Ga0466971_0005120
269 Ga0466970_0069119
270 Ga0466959_0011191
271 Ga0451576_0162323
272 Ga0466967_0022396
273 Ga0466967_0075096
274 Ga0466967_0123266
275 Ga0495658_0180518
276 Ga0495613_0074934
277 Ga0496100_0057322
278 Ga0496100_0074987
279 Ga0496101_0283456
280 Ga0496102_0111260
281 Ga0496103_0090449
282 Ga0496103_0101177
283 Ga0496104_0007462
284 Ga0496105_0005589
285 Ga0496107_0036469
286 Ga0496107_0056217
287 Ga0496108_0076839
288 Ga0496110_0052349
289 Ga0496110_0066324
290 Ga0496111_0045896
291 Ga0496113_0031811
292 Ga0496113_0053234
293 Ga0496114_0000460
294 Ga0496114_0003493
295 Ga0496114_0243545
296 Ga0496115_0033134
297 Ga0496115_0059775
298 Ga0496115_0077844
299 Ga0501031_0007347
300 Ga0501031_0046343
301 Ga0501031_0110137
302 Ga0501032_0133024
303 Ga0501033_0079326
304 Ga0501036_0039374
305 Ga0501036_0066389
306 Ga0501036_0101213
307 Ga0501037_0027812
308 Ga0501038_0118944
309 Ga0501039_0107037
310 Ga0501039_0117420
311 Ga0501039_0189055
312 Ga0501040_0014737
313 Ga0501040_0062053
314 Ga0501041_0010138
315 Ga0501042_0021015
316 Ga0501042_0051962
317 Ga0501042_0233825
318 Ga0501043_0091539
319 Ga0501047_0442895
320 Ga0501048_0002026
321 Ga0501048_0046519
322 Ga0501067_0013124
323 Ga0501069_0020268
324 Ga0501069_0045895
325 Ga0501069_0065507
326 Ga0501070_0020158
327 Ga0501070_0043953
328 Ga0501070_0111251
329 Ga0501070_0148862
330 Ga0501071_0017740
331 Ga0501071_0091831
332 Ga0501071_0097083
333 Ga0501071_0188587
334 Ga0501072_0070790
335 Ga0501073_0019259
336 Ga0501074_0015265
337 Ga0501074_0027344
338 Ga0501074_0038581
339 Ga0501075_0087790
340 Ga0501075_0221434
341 Ga0501076_0003614
342 Ga0501076_0224274
343 Ga0501077_0011755
344 Ga0501077_0022918
345 Ga0501079_0033630
346 Ga0501079_0083084
347 Ga0501080_0014080
348 Ga0501080_0024796
349 Ga0501081_0046306
350 Ga0501081_0088460
351 Ga0501044_0232202
352 Ga0501044_0377938
353 Ga0501045_0014285
354 Ga0501045_0042077
355 Ga0501045_0230492
356 nmdc:mga00v17_30277_c1
357 nmdc:mga00v17_38655_c1
358 nmdc:mga00v17_74776_c1
359 nmdc:mga0yw44_38584_c1
360 Ga0501082_0004395
361 Ga0466962_0036072
362 2643824059
363 2644231518
364 2644533366
365 2738870659
366 2740167400

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01996

F420_ligase

F420-0:Gamma-glutamyl ligase

9

201

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
7ule-assembly1.cif.gz_A f420-1/gdp complex of f420-gamma glutamyl ligase (cofe) from archaeoglobus fulgidus 0.8899 1 227
2g9i-assembly1.cif.gz_B crystal structure of homolog of f420-0:gamma-glutamyl ligase from archaeoglobus fulgidus reveals a novel fold. 0.8309 1 228
7ule-assembly1.cif.gz_A f420-1/gdp complex of f420-gamma glutamyl ligase (cofe) from archaeoglobus fulgidus 0.8133 1 227
2g9i-assembly1.cif.gz_B crystal structure of homolog of f420-0:gamma-glutamyl ligase from archaeoglobus fulgidus reveals a novel fold. 0.8002 1 228
5fyd-assembly1.cif.gz_A structural and biochemical insights into 7beta-hydroxysteroid dehydrogenase stereoselectivity 0.7622 106 132
ID Description Score Start End Superfamily
2phnA01 Alpha Beta;2-Layer Sandwich;60s Ribosomal Protein L30; Chain: A;;CofE-like 0.9417 1 201 3.30.1330.100
2g9iB01 Alpha Beta;2-Layer Sandwich;60s Ribosomal Protein L30; Chain: A;;CofE-like 0.8978 1 201 3.30.1330.100
2phnA01 Alpha Beta;2-Layer Sandwich;60s Ribosomal Protein L30; Chain: A;;CofE-like 0.8892 1 201 3.30.1330.100
2g9iB01 Alpha Beta;2-Layer Sandwich;60s Ribosomal Protein L30; Chain: A;;CofE-like 0.8404 1 201 3.30.1330.100
af_I6Y9I3_9_255_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.7908 106 130 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A7V1U5Y3-F1-model_v4 Coenzyme F420-0:L-glutamate ligase 0.9756 9 129 GO:0052618
AF-A0A838K7K1-F1-model_v4 Coenzyme F420-0:L-glutamate ligase (EC 6.3.2.31) 0.9755 1 222 GO:0005525
GO:0046872
GO:0052618
AF-A0A7Z0Q0T8-F1-model_v4 Coenzyme F420-0:L-glutamate ligase 0.9749 6 124 GO:0052618
AF-A0A7K2M4Z1-F1-model_v4 Coenzyme F420-0:L-glutamate ligase (EC 6.3.2.31) 0.9721 1 206 GO:0005525
GO:0046872
GO:0052618
AF-A0A6I5MGY2-F1-model_v4 deleted 0.9716 6 152

Map