F280884

General Info

Members Datasets Scaffolds Average Seq Length
183 141 366 513

Family's Representative Sequence

Representative Sequence 3300013308|Ga0157375_10054940|Ga0157375_100549404
Length 566
Sequence MQVLKILSPNANTMHPACERSVFPTSFPFFSKGDTMKLRKLCTVAAAIAATLPIAALTTPAWGSSHREAPNITRFPTVDSTDFYLFNSYEPGRDGYVTLLANYIPLQDPYGGPNYFAMDPSALYEIHVDNDGDANENLTFQFRFSNRLANDNRGIKLNIGGPQVAVPLKNVGGVSAADSSALNFRESYQMWLVRGNRRHGDASQVTGASGGTVFGKPYDFVGTKTFGSVANYQAYANSFIHTINVPGCNMPGRVFVGQRKEGFAVNLGRVFDLVNLVPVEGDSAPGAGDGKGFPGGITQSRANNIVDKSNVTTIALELHKSCLTGTGNGVIGGWTSASLRQARLLNPVPTFSRPDVDGGPWVQISRLGMPLVNELVIGLPDKDRFSASEPRFDGQFGTYVTNPTLPALLDALFRGAVNQTLGTNIANLAPNNLPRNDLVTAFLTGFPGVNQMSKVTASEMTRLNTGIPAAPAAGQSNFGVAGGDLAGFPNGRRPGDDTVDIALRVVMGRLCYPLTIGGNSVDLGLCTPANAPVGNVPFTDGAPVSAADFDTTFPYLTTPLPGSGGY

Samples

Sample ID Description Type Environment
1 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
4 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
5 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
6 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
7 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
8 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
9 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
10 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
11 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
12 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
13 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
14 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
15 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
16 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
17 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
18 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
19 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
20 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
21 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
22 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
23 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
24 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
25 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
26 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
27 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
28 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
29 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
30 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
31 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
32 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
33 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
34 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
35 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
36 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
37 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
38 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
39 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
40 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
41 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
42 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
60 3300028016 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 Metagenome Rhizosphere
61 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
63 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
64 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
65 3300030878 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
66 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
67 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
68 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
69 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
70 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
71 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
72 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
73 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
74 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
75 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
76 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
77 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
78 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
79 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
80 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
81 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
82 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
83 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
84 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
85 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
86 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
87 3300041458 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_10 MetaG Metagenome Rhizoplane
88 3300042125 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_082716_2472 Metagenome Rhizosphere
89 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
90 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
91 3300042437 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z081617_5554 Metagenome Rhizosphere
92 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
93 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
94 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
95 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
96 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
97 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
98 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
99 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
100 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
101 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
102 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
103 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
104 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
105 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
106 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
107 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
108 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
109 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
110 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
111 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
112 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
113 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
114 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
115 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
116 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
117 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
118 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
119 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
120 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
121 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
122 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
123 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
124 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
125 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
126 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
127 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
128 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
129 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
130 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
131 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
132 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
133 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
134 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
135 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
136 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
137 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
138 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
139 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
140 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
141 8047673197 Telluria mixta LMG 11547 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.36
Metatranscriptomes 1.09
Isolates 0.55

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.1
Nodule 0.55
Rhizoplane 2.73
Rhizosphere 77.05
Stem 0
Stem Tuber 0
Unclassified 0.55

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0157375_10054940 3300013308 Bacteria 3924
2 JGI25406J46586_10007499 3300003203 Bacteria 4975
3 rootH1_10053882 3300003316 Bacteria 3815
4 rootH2_10125387 3300003320 Bacteria 5639
5 rootH1_10006133 3300003323 Bacteria 22661
6 rootH1_10178871 3300003323 Bacteria 2731
7 Ga0055525_1000006 3300003759 Bacteria 642912
8 Ga0065165_1027598 3300005262 Bacteria 1847
9 Ga0070670_100037096 3300005331 Bacteria 4194
10 Ga0070670_100061893 3300005331 Bacteria 3212
11 Ga0070670_100117900 3300005331 Bacteria 2289
12 Ga0070682_100010783 3300005337 Bacteria 5197
13 Ga0070668_100123319 3300005347 Bacteria 2073
14 Ga0070669_100136971 3300005353 Bacteria 1884
15 Ga0070675_100021404 3300005354 Bacteria 5168
16 Ga0070675_100046907 3300005354 Bacteria 3540
17 Ga0070674_100053943 3300005356 Bacteria 2778
18 Ga0070678_100013324 3300005456 Bacteria 5150
19 Ga0070681_10177283 3300005458 Bacteria 2053
20 Ga0070672_100003157 3300005543 Bacteria 10648
21 Ga0070672_100023779 3300005543 Bacteria 4520
22 Ga0070672_100036729 3300005543 Bacteria 3734
23 Ga0070686_100021943 3300005544 Bacteria 3800
24 Ga0070693_100076535 3300005547 Bacteria 1983
25 Ga0070665_100000028 3300005548 Bacteria 351357
26 Ga0070665_100008394 3300005548 Bacteria 10448
27 Ga0070665_100011405 3300005548 Bacteria 8985
28 Ga0068855_100006067 3300005563 Bacteria 14733
29 Ga0070664_100082559 3300005564 Bacteria 2772
30 Ga0068856_100010630 3300005614 Bacteria 8946
31 Ga0070702_100033582 3300005615 Bacteria 2822
32 Ga0068861_100053736 3300005719 Bacteria 3066
33 Ga0081455_10000463 3300005937 Bacteria 52989
34 Ga0081455_10044577 3300005937 Bacteria 3867
35 Ga0081455_10132114 3300005937 Unclassified 1950
36 Ga0081539_10000006 3300005985 Bacteria 534555
37 Ga0097621_100070740 3300006237 Bacteria 2881
38 Ga0068871_100026515 3300006358 Bacteria 4523
39 Ga0075428_100016054 3300006844 Bacteria 8281
40 Ga0075433_10002629 3300006852 Bacteria 13710
41 Ga0075434_100000154 3300006871 Bacteria 42762
42 Ga0068865_100018403 3300006881 Bacteria 4506
43 Ga0099826_10030452 3300006948 Bacteria 3918
44 Ga0111539_10003231 3300009094 Bacteria 21556
45 Ga0111539_10015394 3300009094 Bacteria 9518
46 Ga0105243_10068589 3300009148 Bacteria 2858
47 Ga0105243_10076386 3300009148 Bacteria 2721
48 Ga0105238_10027124 3300009551 Bacteria 5839
49 Ga0105249_10072483 3300009553 Bacteria 3184
50 Ga0105249_10099203 3300009553 Bacteria 2737
51 Ga0163162_10247156 3300013306 Bacteria 1915
52 Ga0157375_10004683 3300013308 Bacteria 11900
53 Ga0157375_10358040 3300013308 Bacteria 1625
54 Ga0157380_10013902 3300014326 Bacteria 5878
55 Ga0157380_10039375 3300014326 Bacteria 3675
56 Ga0157380_10059292 3300014326 Bacteria 3053
57 Ga0213875_10006334 3300021388 Bacteria 6227
58 Ga0209563_100022 3300025230 Bacteria 643318
59 Ga0207682_10003963 3300025893 Bacteria 6307
60 Ga0207643_10030084 3300025908 Bacteria 3021
61 Ga0207659_10007265 3300025926 Bacteria 6805
62 Ga0207709_10043063 3300025935 Bacteria 2719
63 Ga0207670_10060845 3300025936 Bacteria 2574
64 Ga0207669_10031461 3300025937 Bacteria 2965
65 Ga0207669_10060167 3300025937 Bacteria 2327
66 Ga0207704_10041347 3300025938 Bacteria 2702
67 Ga0207691_10002056 3300025940 Bacteria 19668
68 Ga0207691_10019608 3300025940 Bacteria 6398
69 Ga0207691_10023726 3300025940 Bacteria 5774
70 Ga0207691_10083034 3300025940 Bacteria 2877
71 Ga0207689_10105720 3300025942 Bacteria 2312
72 Ga0207679_10069378 3300025945 Bacteria 2652
73 Ga0207667_10018928 3300025949 Bacteria 7703
74 Ga0207658_10005706 3300025986 Bacteria 8512
75 Ga0207702_10023563 3300026078 Bacteria 5106
76 Ga0207641_10040992 3300026088 Bacteria 3879
77 Ga0207648_10083190 3300026089 Bacteria 2791
78 Ga0207675_100009159 3300026118 Bacteria 9285
79 Ga0207675_100139131 3300026118 Bacteria 2305
80 Ga0207675_100221185 3300026118 Bacteria 1824
81 Ga0207683_10004107 3300026121 Bacteria 12581
82 Ga0207428_10000848 3300027907 Bacteria 34448
83 Ga0265354_1000493 3300028016 Bacteria 6808
84 Ga0268266_10000017 3300028379 Bacteria 607272
85 Ga0265334_10000216 3300028573 Bacteria 33128
86 Ga0307515_10003209 3300028794 Bacteria 34604
87 Ga0265338_10030902 3300028800 Bacteria 5262
88 Ga0265770_1000004 3300030878 Bacteria 23689
89 Ga0265760_10001381 3300031090 Bacteria 7126
90 Ga0307513_10013252 3300031456 Bacteria 10123
91 Ga0307513_10020400 3300031456 Bacteria 7862
92 Ga0307513_10055274 3300031456 Bacteria 4249
93 Ga0307513_10055823 3300031456 Bacteria 4223
94 Ga0307509_10023963 3300031507 Bacteria 6842
95 Ga0307509_10220920 3300031507 Bacteria 1708
96 Ga0307514_10106054 3300031649 Bacteria 2005
97 Ga0307516_10008667 3300031730 Bacteria 11450
98 Ga0307405_10015159 3300031731 Bacteria 4166
99 Ga0307413_10010960 3300031824 Bacteria 4429
100 Ga0307410_10019332 3300031852 Bacteria 4141
101 Ga0307410_10063139 3300031852 Bacteria 2540
102 Ga0307407_10042117 3300031903 Bacteria 2558
103 Ga0307416_100051042 3300032002 Bacteria 3301
104 Ga0307411_10036046 3300032005 Bacteria 3095
105 Ga0307510_10000002 3300033180 Bacteria 801565
106 Ga0307510_10012635 3300033180 Bacteria 10016
107 Ga0373955_0059770 3300035172 Bacteria 2100
108 Ga0373925_0121030 3300037068 Bacteria 2032
109 Ga0395899_0016601 3300037312 Bacteria 5616
110 Ga0395899_0034583 3300037312 Bacteria 3795
111 Ga0395900_0000992 3300037418 Bacteria 36889
112 Ga0395900_0002848 3300037418 Bacteria 18873
113 Ga0395900_0035247 3300037418 Bacteria 5154
114 Ga0395898_0006187 3300037466 Bacteria 12824
115 Ga0395905_0018202 3300037471 Bacteria 6668
116 Ga0436364_1167941 3300037853 Bacteria 6228
117 Ga0395901_0002810 3300038443 Bacteria 17579
118 Ga0395901_0023234 3300038443 Bacteria 6355
119 Ga0400483_117203 3300039062 Bacteria 4164
120 Ga0400483_238820 3300039062 Bacteria 3338
121 Ga0451798_0733055 3300041458 Bacteria 2982
122 Ga0450923_003692 3300042125 Bacteria 2340
123 Ga0439446_0001579 3300042156 Bacteria 5235
124 Ga0439434_0016536 3300042435 Bacteria 2204
125 Ga0439444_0004041 3300042437 Bacteria 2106
126 Ga0466957_0008111 3300044842 Bacteria 5959
127 Ga0495590_0005106 3300046457 Bacteria 5231
128 Ga0495638_0013875 3300046460 Bacteria 5465
129 Ga0495605_0000039 3300046474 Bacteria 196802
130 Ga0495584_0000870 3300046491 Bacteria 19492
131 Ga0495607_0002491 3300046501 Bacteria 14916
132 Ga0495606_0030846 3300046507 Bacteria 3738
133 Ga0495616_0004254 3300046513 Bacteria 9050
134 Ga0495616_0025153 3300046513 Bacteria 3185
135 Ga0495632_0037074 3300046519 Bacteria 2477
136 Ga0495643_0000876 3300046522 Bacteria 32061
137 Ga0495625_0073148 3300046660 Bacteria 2403
138 Ga0495661_0002521 3300046665 Bacteria 14062
139 Ga0495661_0006533 3300046665 Bacteria 8191
140 Ga0495661_0036869 3300046665 Bacteria 3057
141 Ga0495588_0000059 3300046674 Bacteria 263358
142 Ga0495588_0045419 3300046674 Bacteria 2251
143 Ga0495649_0002655 3300046694 Bacteria 12453
144 Ga0495589_0000133 3300046794 Bacteria 68226
145 Ga0495672_0000970 3300047320 Bacteria 29803
146 Ga0495683_0032885 3300047323 Bacteria 2641
147 Ga0495687_000693 3300047443 Bacteria 38036
148 Ga0495677_0000634 3300047445 Bacteria 14171
149 Ga0495626_0000004 3300048091 Bacteria 356599
150 Ga0495626_0000058 3300048091 Bacteria 147007
151 Ga0496100_0089307 3300048903 Bacteria 2099
152 Ga0496105_0010117 3300048908 Bacteria 7408
153 Ga0496114_0002166 3300048917 Bacteria 14952
154 Ga0496114_0078949 3300048917 Bacteria 2777
155 Ga0496119_0015399 3300048922 Bacteria 5891
156 Ga0496122_0013864 3300048925 Bacteria 7848
157 Ga0496123_0002937 3300048926 Bacteria 19934
158 Ga0496125_0007701 3300048928 Bacteria 11413
159 Ga0501068_0001946 3300049584 Bacteria 10981
160 Ga0501071_0013336 3300049587 Bacteria 5598
161 Ga0501073_0013643 3300049589 Bacteria 5911
162 Ga0501074_0001285 3300049590 Bacteria 16634
163 Ga0501076_0023193 3300049592 Bacteria 4781
164 Ga0501077_0002871 3300049593 Bacteria 10339
165 Ga0501079_0000277 3300049741 Bacteria 31633
166 Ga0501080_0004492 3300049742 Bacteria 12431
167 nmdc:mga03683_26122_c1 3300050489 Bacteria 2301
168 nmdc:mga08y16_107039_c1 3300050511 Bacteria 2910
169 nmdc:mga08y16_32105_c1 3300050511 Bacteria 5521
170 nmdc:mga0n895_7172_c1 3300050512 Bacteria 9537
171 nmdc:mga0a205_862_c1 3300050515 Bacteria 24830
172 Ga0500635_0000432 3300053080 Bacteria 12152
173 Ga0500583_0057167 3300053092 Bacteria 1831
174 Ga0500556_0011263 3300053104 Bacteria 2646
175 Ga0500594_0010202 3300053118 Bacteria 2176
176 Ga0500588_0010382 3300053146 Bacteria 2246
177 Ga0500616_0000092 3300053153 Bacteria 183860
178 Ga0500622_0002383 3300053156 Bacteria 13623
179 Ga0500622_0002828 3300053156 Bacteria 12174
180 Ga0500637_0003051 3300053178 Bacteria 7621
181 Ga0501084_0011030 3300054114 Bacteria 7485
182 Ga0530510_0200227 3300061734 Bacteria 1483
183 8047676695 8047673197 Bacteria 7395230
184 Ga0157375_10054940
185 JGI25406J46586_10007499
186 rootH1_10053882
187 rootH2_10125387
188 rootH1_10006133
189 rootH1_10178871
190 Ga0055525_1000006
191 Ga0065165_1027598
192 Ga0070670_100037096
193 Ga0070670_100061893
194 Ga0070670_100117900
195 Ga0070682_100010783
196 Ga0070668_100123319
197 Ga0070669_100136971
198 Ga0070675_100021404
199 Ga0070675_100046907
200 Ga0070674_100053943
201 Ga0070678_100013324
202 Ga0070681_10177283
203 Ga0070672_100003157
204 Ga0070672_100023779
205 Ga0070672_100036729
206 Ga0070686_100021943
207 Ga0070693_100076535
208 Ga0070665_100000028
209 Ga0070665_100008394
210 Ga0070665_100011405
211 Ga0068855_100006067
212 Ga0070664_100082559
213 Ga0068856_100010630
214 Ga0070702_100033582
215 Ga0068861_100053736
216 Ga0081455_10000463
217 Ga0081455_10044577
218 Ga0081455_10132114
219 Ga0081539_10000006
220 Ga0097621_100070740
221 Ga0068871_100026515
222 Ga0075428_100016054
223 Ga0075433_10002629
224 Ga0075434_100000154
225 Ga0068865_100018403
226 Ga0099826_10030452
227 Ga0111539_10003231
228 Ga0111539_10015394
229 Ga0105243_10068589
230 Ga0105243_10076386
231 Ga0105238_10027124
232 Ga0105249_10072483
233 Ga0105249_10099203
234 Ga0163162_10247156
235 Ga0157375_10004683
236 Ga0157375_10358040
237 Ga0157380_10013902
238 Ga0157380_10039375
239 Ga0157380_10059292
240 Ga0213875_10006334
241 Ga0209563_100022
242 Ga0207682_10003963
243 Ga0207643_10030084
244 Ga0207659_10007265
245 Ga0207709_10043063
246 Ga0207670_10060845
247 Ga0207669_10031461
248 Ga0207669_10060167
249 Ga0207704_10041347
250 Ga0207691_10002056
251 Ga0207691_10019608
252 Ga0207691_10023726
253 Ga0207691_10083034
254 Ga0207689_10105720
255 Ga0207679_10069378
256 Ga0207667_10018928
257 Ga0207658_10005706
258 Ga0207702_10023563
259 Ga0207641_10040992
260 Ga0207648_10083190
261 Ga0207675_100009159
262 Ga0207675_100139131
263 Ga0207675_100221185
264 Ga0207683_10004107
265 Ga0207428_10000848
266 Ga0265354_1000493
267 Ga0268266_10000017
268 Ga0265334_10000216
269 Ga0307515_10003209
270 Ga0265338_10030902
271 Ga0265770_1000004
272 Ga0265760_10001381
273 Ga0307513_10013252
274 Ga0307513_10020400
275 Ga0307513_10055274
276 Ga0307513_10055823
277 Ga0307509_10023963
278 Ga0307509_10220920
279 Ga0307514_10106054
280 Ga0307516_10008667
281 Ga0307405_10015159
282 Ga0307413_10010960
283 Ga0307410_10019332
284 Ga0307410_10063139
285 Ga0307407_10042117
286 Ga0307416_100051042
287 Ga0307411_10036046
288 Ga0307510_10000002
289 Ga0307510_10012635
290 Ga0373955_0059770
291 Ga0373925_0121030
292 Ga0395899_0016601
293 Ga0395899_0034583
294 Ga0395900_0000992
295 Ga0395900_0002848
296 Ga0395900_0035247
297 Ga0395898_0006187
298 Ga0395905_0018202
299 Ga0436364_1167941
300 Ga0395901_0002810
301 Ga0395901_0023234
302 Ga0400483_117203
303 Ga0400483_238820
304 Ga0451798_0733055
305 Ga0450923_003692
306 Ga0439446_0001579
307 Ga0439434_0016536
308 Ga0439444_0004041
309 Ga0466957_0008111
310 Ga0495590_0005106
311 Ga0495638_0013875
312 Ga0495605_0000039
313 Ga0495584_0000870
314 Ga0495607_0002491
315 Ga0495606_0030846
316 Ga0495616_0004254
317 Ga0495616_0025153
318 Ga0495632_0037074
319 Ga0495643_0000876
320 Ga0495625_0073148
321 Ga0495661_0002521
322 Ga0495661_0006533
323 Ga0495661_0036869
324 Ga0495588_0000059
325 Ga0495588_0045419
326 Ga0495649_0002655
327 Ga0495589_0000133
328 Ga0495672_0000970
329 Ga0495683_0032885
330 Ga0495687_000693
331 Ga0495677_0000634
332 Ga0495626_0000004
333 Ga0495626_0000058
334 Ga0496100_0089307
335 Ga0496105_0010117
336 Ga0496114_0002166
337 Ga0496114_0078949
338 Ga0496119_0015399
339 Ga0496122_0013864
340 Ga0496123_0002937
341 Ga0496125_0007701
342 Ga0501068_0001946
343 Ga0501071_0013336
344 Ga0501073_0013643
345 Ga0501074_0001285
346 Ga0501076_0023193
347 Ga0501077_0002871
348 Ga0501079_0000277
349 Ga0501080_0004492
350 nmdc:mga03683_26122_c1
351 nmdc:mga08y16_107039_c1
352 nmdc:mga08y16_32105_c1
353 nmdc:mga0n895_7172_c1
354 nmdc:mga0a205_862_c1
355 Ga0500635_0000432
356 Ga0500583_0057167
357 Ga0500556_0011263
358 Ga0500594_0010202
359 Ga0500588_0010382
360 Ga0500616_0000092
361 Ga0500622_0002383
362 Ga0500622_0002828
363 Ga0500637_0003051
364 Ga0501084_0011030
365 Ga0530510_0200227
366 8047676695

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF14224

DUF4331

Domain of unknown function (DUF4331)

64

559

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
2vfx-assembly8.cif.gz_H structure of the symmetric mad2 dimer 0.6482 84 108
6ww9-assembly1.cif.gz_A crystal structure of human rev7(r124a)-shld3(35-58) complex 0.6162 80 111
1go4-assembly1.cif.gz_C crystal structure of mad1-mad2 reveals a conserved mad2 binding motif in mad1 and cdc20. 0.5859 82 105
3vu7-assembly1.cif.gz_C crystal structure of rev1-rev7-rev3 ternary complex 0.5796 80 114
8dt8-assembly1.cif.gz_H lm18/nb136 bispecific tetra-nanobody immunoglobulin in complex with sars-cov-2-6p-mut7 s protein (focused refinement) 0.3406 39 316
ID Description Score Start End Superfamily
af_Q9VRQ2_1_207_3.30.900.10 Alpha Beta;2-Layer Sandwich;Cell Cycle, Spindle Assembly Checkpoint Protein; Chain A;HORMA domain 0.6766 84 111 3.30.900.10
af_Q94FL5_7_197_3.30.900.10 Alpha Beta;2-Layer Sandwich;Cell Cycle, Spindle Assembly Checkpoint Protein; Chain A;HORMA domain 0.5847 84 114 3.30.900.10
2qyfC00 Alpha Beta;2-Layer Sandwich;Cell Cycle, Spindle Assembly Checkpoint Protein; Chain A;HORMA domain 0.5713 82 111 3.30.900.10
af_Q4DB17_4_222_3.30.900.10 Alpha Beta;2-Layer Sandwich;Cell Cycle, Spindle Assembly Checkpoint Protein; Chain A;HORMA domain 0.4379 79 104 3.30.900.10
4nhfB00 Alpha Beta;Roll;Nuclear Transport Factor 2; Chain: A,;VirB8 protein 0.4316 97 185 3.10.450.230
ID Description Score Start End GO Terms
AF-A0A3D0SDP8-F1-model_v4 DUF4331 domain-containing protein 0.9564 323 500
AF-A0A7C1QH73-F1-model_v4 deleted 0.9503 152 517
AF-A0A127Q7Z1-F1-model_v4 DUF4331 domain-containing protein 0.9392 47 518
AF-A0A7V2T258-F1-model_v4 DUF4331 domain-containing protein 0.9389 68 515
AF-A0A3D0SDP8-F1-model_v4 DUF4331 domain-containing protein 0.936 323 500

Map