F280839

General Info

Members Datasets Scaffolds Average Seq Length
183 139 364 389

Family's Representative Sequence

Representative Sequence 3300013100|Ga0157373_10005705|Ga0157373_100057057
Length 441
Sequence LLFENEFFSFRISFLLETLLQQQNKPTMERISTATPIHVHVSSPLQKRAYRIESIDLLRGLVMIIMALDHTRDFFHQPANIEDPLNMATTTPVLFLTRWITHFCAPVFVFLAGTSAFFQSSRKSKPELSKFLITRGLWLVFIEVFVINLAYSFDPAYTVVGLQTIWSIGIGMIILGLAIWMPFAAILGIGLLIVFGHNALDFYEQQFPRDHTYNIFYSFLHRPGIYSLGGGRSLLIFYPLLSWAGLMMLGYCFGKLFNKYDGAQRKKVLTQLGLGIILFFIVLRATNWYGDANHWTIQKNGLFTVFSFINTVKYPPSLLYMCMTIGPAILFVAWWGNVKNGVTKFITVYGKVPFFYYVIHFFWIHLLSTHAFFARGHSFYEGKHIRSESPLPAANFLPPGEGYDLFIVYIVWMFVFISLYPLCKWFSQYKQTHKQRWLSYL

Samples

Sample ID Description Type Environment
1 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
2 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
3 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
4 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
9 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
10 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
11 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
12 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
13 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
14 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
15 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
16 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
17 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
18 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
19 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
20 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
21 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
22 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
23 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
24 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
25 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
26 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
27 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
28 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
29 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
30 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
31 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
32 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
33 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
34 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
35 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
36 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
37 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
38 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
39 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
40 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
41 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
42 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
43 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
44 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
45 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
46 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
47 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
48 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
49 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
50 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
51 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
52 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
53 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
54 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
55 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
56 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
57 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
58 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
59 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
60 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
61 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
62 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
63 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
64 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
65 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
66 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
67 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
90 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
93 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
94 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
95 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
96 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
97 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
98 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
99 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
100 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
101 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
102 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
103 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
104 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
105 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
106 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
107 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
108 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
109 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
110 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
111 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
112 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
113 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
114 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
115 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
116 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
117 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
118 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
119 3300049649 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J5_A_0_drought Metagenome Rhizosphere
120 3300049652 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_A_0_drought Metagenome Rhizosphere
121 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
122 3300049668 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought Metagenome Rhizosphere
123 3300049675 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I12_A_3_control Metagenome Rhizosphere
124 3300049677 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_A_3_control Metagenome Rhizosphere
125 3300049682 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F11_B_3_drought Metagenome Rhizosphere
126 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
127 3300049688 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_A_4_drought Metagenome Rhizosphere
128 3300049704 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G2_A_2_control Metagenome Rhizosphere
129 3300049708 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D14_A_3_control Metagenome Rhizosphere
130 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
131 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
132 3300050005 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E22_A_7_drought Metagenome Rhizosphere
133 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
134 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
135 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
136 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
137 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
138 2522125168 Dyadobacter beijingensis DSM 21582 Isolate Rhizosphere
139 2896085136 Chitinophaga alhagiae T22 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 98.91
Metatranscriptomes 0
Isolates 1.09

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.83
Nodule 0
Rhizoplane 0.55
Rhizosphere 90.16
Stem 0
Stem Tuber 0
Unclassified 14.21

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0157373_10005705 3300013100 Bacteria 9331
2 rootL2_10071657 3300003322 Bacteria 2166
3 rootL2_10072755 3300003322 Bacteria 1861
4 Ga0065165_1000483 3300005262 Bacteria 61664
5 Ga0065712_10134505 3300005290 Bacteria 1512
6 Ga0065712_10167513 3300005290 Unclassified 1263
7 Ga0070683_100019387 3300005329 Bacteria 6040
8 Ga0070670_100037036 3300005331 Unclassified 4197
9 Ga0070670_100111436 3300005331 Bacteria 2358
10 Ga0070670_100137273 3300005331 Unclassified 2113
11 Ga0070680_100001354 3300005336 Bacteria 17734
12 Ga0070680_100029887 3300005336 Bacteria 4375
13 Ga0070682_100112128 3300005337 Bacteria 1819
14 Ga0068868_100003146 3300005338 Bacteria 11490
15 Ga0068868_100016428 3300005338 Bacteria 5496
16 Ga0070689_100053058 3300005340 Bacteria 3137
17 Ga0070691_10004273 3300005341 Bacteria 6485
18 Ga0070692_10150657 3300005345 Unclassified 1324
19 Ga0070669_100186062 3300005353 Bacteria 1627
20 Ga0070671_100057926 3300005355 Bacteria 3225
21 Ga0070674_100048053 3300005356 Bacteria 2927
22 Ga0070673_100054272 3300005364 Unclassified 3152
23 Ga0070667_100042774 3300005367 Bacteria 3801
24 Ga0070694_100005385 3300005444 Bacteria 7745
25 Ga0070694_100006971 3300005444 Bacteria 6866
26 Ga0070663_100199764 3300005455 Bacteria 1560
27 Ga0070678_100007947 3300005456 Bacteria 6320
28 Ga0070681_10057920 3300005458 Bacteria 3855
29 Ga0070681_10059984 3300005458 Bacteria 3783
30 Ga0068867_100082258 3300005459 Bacteria 2428
31 Ga0070706_100170282 3300005467 Unclassified 2033
32 Ga0070698_100003501 3300005471 Bacteria 17268
33 Ga0070698_100055327 3300005471 Unclassified 4025
34 Ga0070699_100204723 3300005518 Bacteria 1755
35 Ga0070679_100102895 3300005530 Bacteria 2842
36 Ga0070684_100065061 3300005535 Unclassified 3200
37 Ga0070697_100027177 3300005536 Bacteria 4576
38 Ga0068853_100001106 3300005539 Bacteria 19090
39 Ga0068853_100007496 3300005539 Bacteria 8734
40 Ga0070695_100002344 3300005545 Bacteria 10865
41 Ga0070695_100011216 3300005545 Bacteria 5359
42 Ga0070696_100015326 3300005546 Bacteria 5147
43 Ga0070696_100156142 3300005546 Bacteria 1678
44 Ga0070693_100009266 3300005547 Bacteria 4891
45 Ga0070693_100017289 3300005547 Bacteria 3746
46 Ga0070704_100014530 3300005549 Bacteria 4919
47 Ga0070704_100044800 3300005549 Bacteria 3076
48 Ga0068855_100054379 3300005563 Bacteria 4705
49 Ga0070664_100029995 3300005564 Bacteria 4536
50 Ga0068857_100191056 3300005577 Unclassified 1865
51 Ga0068852_100379518 3300005616 Unclassified 1386
52 Ga0068859_100025041 3300005617 Bacteria 5990
53 Ga0068851_10032337 3300005834 Bacteria 2603
54 Ga0068863_100000490 3300005841 Bacteria 40207
55 Ga0068863_100030589 3300005841 Bacteria 5141
56 Ga0068858_100112882 3300005842 Bacteria 2538
57 Ga0068860_100004380 3300005843 Bacteria 14417
58 Ga0081455_10240083 3300005937 Unclassified 1332
59 Ga0070716_100149429 3300006173 Unclassified 1501
60 Ga0075366_10094645 3300006195 Bacteria 1791
61 Ga0068871_100130474 3300006358 Bacteria 2131
62 Ga0075434_100338048 3300006871 Bacteria 1526
63 Ga0097620_100025041 3300006931 Bacteria 5990
64 Ga0105240_10008213 3300009093 Bacteria 14962
65 Ga0105240_10478420 3300009093 Bacteria 1389
66 Ga0111539_10004591 3300009094 Bacteria 18046
67 Ga0111539_10529824 3300009094 Bacteria 1372
68 Ga0105247_10001033 3300009101 Bacteria 20949
69 Ga0105237_10023760 3300009545 Bacteria 6275
70 Ga0105249_10001259 3300009553 Bacteria 22224
71 Ga0105249_10185144 3300009553 Bacteria 2029
72 Ga0105249_10335293 3300009553 Bacteria 1527
73 Ga0105239_10161950 3300010375 Bacteria 2500
74 Ga0157371_10010568 3300013102 Bacteria 7175
75 Ga0157371_10141637 3300013102 Bacteria 1713
76 Ga0157374_10027106 3300013296 Bacteria 5164
77 Ga0157378_10002779 3300013297 Bacteria 15601
78 Ga0157378_10004718 3300013297 Bacteria 11951
79 Ga0157378_10041002 3300013297 Bacteria 4107
80 Ga0157372_10007410 3300013307 Bacteria 11669
81 Ga0157372_10011877 3300013307 Bacteria 9279
82 Ga0157372_10238739 3300013307 Bacteria 2109
83 Ga0157372_10290211 3300013307 Bacteria 1902
84 Ga0157375_10348942 3300013308 Bacteria 1646
85 Ga0163163_10012934 3300014325 Bacteria 7620
86 Ga0163163_10295409 3300014325 Bacteria 1672
87 Ga0157380_10000020 3300014326 Bacteria 114925
88 Ga0157380_10055781 3300014326 Unclassified 3139
89 Ga0157377_10019668 3300014745 Unclassified 3530
90 Ga0213876_10003058 3300021384 Bacteria 9675
91 Ga0209233_1006895 3300025261 Bacteria 3633
92 Ga0209676_1000841 3300025292 Bacteria 39708
93 Ga0209050_1025580 3300025298 Bacteria 2001
94 Ga0207656_10047245 3300025321 Bacteria 1850
95 Ga0207705_10155425 3300025909 Bacteria 1716
96 Ga0207654_10065642 3300025911 Bacteria 2137
97 Ga0207707_10000823 3300025912 Bacteria 30438
98 Ga0207695_10006041 3300025913 Bacteria 15815
99 Ga0207660_10123046 3300025917 Bacteria 1967
100 Ga0207652_10006622 3300025921 Bacteria 9334
101 Ga0207646_10134686 3300025922 Unclassified 2224
102 Ga0207650_10000886 3300025925 Bacteria 22639
103 Ga0207669_10034150 3300025937 Bacteria 2879
104 Ga0207665_10016477 3300025939 Bacteria 4852
105 Ga0207661_10008144 3300025944 Bacteria 7480
106 Ga0207679_10017645 3300025945 Unclassified 4764
107 Ga0207651_10010265 3300025960 Bacteria 5181
108 Ga0207651_10121135 3300025960 Bacteria 1984
109 Ga0207712_10000482 3300025961 Bacteria 33330
110 Ga0207639_10001901 3300026041 Bacteria 14007
111 Ga0207639_10007506 3300026041 Bacteria 7437
112 Ga0207639_10172342 3300026041 Bacteria 1834
113 Ga0207641_10024785 3300026088 Bacteria 4945
114 Ga0207641_10027386 3300026088 Bacteria 4706
115 Ga0207641_10121213 3300026088 Bacteria 2334
116 Ga0207648_10014598 3300026089 Bacteria 7252
117 Ga0207676_10130464 3300026095 Bacteria 2136
118 Ga0207676_10223102 3300026095 Bacteria 1680
119 Ga0207674_10087406 3300026116 Bacteria 3111
120 Ga0207674_10212951 3300026116 Unclassified 1881
121 Ga0207675_100062977 3300026118 Bacteria 3465
122 Ga0207698_10022168 3300026142 Unclassified 4408
123 Ga0207698_10122963 3300026142 Bacteria 2200
124 Ga0207428_10016729 3300027907 Bacteria 6308
125 Ga0207428_10083003 3300027907 Bacteria 2500
126 Ga0268265_10170475 3300028380 Bacteria 1860
127 Ga0268264_10100447 3300028381 Unclassified 2513
128 Ga0265318_10028085 3300028577 Bacteria 2204
129 Ga0265327_10000013 3300031251 Bacteria 519549
130 Ga0265327_10000168 3300031251 Bacteria 141392
131 Ga0265327_10011556 3300031251 Bacteria 6063
132 Ga0307509_10020519 3300031507 Bacteria 7493
133 Ga0307509_10026187 3300031507 Bacteria 6505
134 Ga0307408_100039156 3300031548 Bacteria 3349
135 Ga0307508_10000606 3300031616 Bacteria 42966
136 Ga0307508_10101776 3300031616 Unclassified 2469
137 Ga0307414_10207437 3300032004 Bacteria 1599
138 Ga0373937_0184261 3300036401 Bacteria 1961
139 Ga0395899_0001371 3300037312 Bacteria 20896
140 Ga0395900_0000203 3300037418 Bacteria 93536
141 Ga0395898_0001978 3300037466 Bacteria 25752
142 Ga0395905_0134503 3300037471 Unclassified 2326
143 Ga0395901_0008182 3300038443 Bacteria 10570
144 Ga0436365_1196296 3300039437 Bacteria 12077
145 Ga0451577_0275864 3300042876 Unclassified 1523
146 Ga0453684_0019697 3300044712 Bacteria 10244
147 Ga0466959_0064619 3300045049 Bacteria 2657
148 Ga0451576_0002069 3300045051 Bacteria 31454
149 Ga0451576_0007901 3300045051 Bacteria 12602
150 Ga0495651_0112720 3300046462 Bacteria 2009
151 Ga0495639_0102462 3300046475 Bacteria 1353
152 Ga0495608_0068000 3300046511 Bacteria 2330
153 Ga0495652_0081018 3300046529 Bacteria 2679
154 Ga0495621_0001697 3300046539 Bacteria 5770
155 Ga0495645_0016723 3300046543 Bacteria 5246
156 Ga0495604_0033035 3300047317 Bacteria 4097
157 Ga0495674_0062456 3300047319 Bacteria 3244
158 Ga0496104_0273291 3300048907 Bacteria 1603
159 Ga0501034_0000114 3300049571 Bacteria 148505
160 Ga0501034_0108675 3300049571 Bacteria 2765
161 Ga0501198_011042 3300049649 Bacteria 1343
162 Ga0501202_011178 3300049652 Unclassified 1678
163 Ga0501217_004123 3300049661 Bacteria 2978
164 Ga0501233_035820 3300049668 Bacteria 1145
165 Ga0501243_001615 3300049675 Bacteria 3242
166 Ga0501247_003038 3300049677 Bacteria 1782
167 Ga0501252_001880 3300049682 Unclassified 2018
168 Ga0501257_007271 3300049686 Bacteria 2474
169 Ga0501259_001264 3300049688 Bacteria 4228
170 Ga0501221_006276 3300049704 Unclassified 2007
171 Ga0501245_006784 3300049708 Bacteria 1609
172 Ga0501245_012608 3300049708 Bacteria 1242
173 Ga0501080_0145293 3300049742 Unclassified 2192
174 Ga0501044_0034949 3300049823 Bacteria 5266
175 Ga0501284_00511 3300050005 Bacteria 2018
176 nmdc:mga0k408_10436_c1 3300050493 Bacteria 5021
177 nmdc:mga0n895_334899_c1 3300050512 Bacteria 1533
178 Ga0500616_0076519 3300053153 Bacteria 1692
179 Ga0501084_0067985 3300054114 Bacteria 2983
180 Ga0501082_0010281 3300060353 Bacteria 8055
181 2522552061 2522125168 Bacteria 7376607
182 2896089127 2896085136 Bacteria 6129793
183 Ga0157373_10005705
184 rootL2_10071657
185 rootL2_10072755
186 Ga0065165_1000483
187 Ga0065712_10134505
188 Ga0065712_10167513
189 Ga0070683_100019387
190 Ga0070670_100037036
191 Ga0070670_100111436
192 Ga0070670_100137273
193 Ga0070680_100001354
194 Ga0070680_100029887
195 Ga0070682_100112128
196 Ga0068868_100003146
197 Ga0068868_100016428
198 Ga0070689_100053058
199 Ga0070691_10004273
200 Ga0070692_10150657
201 Ga0070669_100186062
202 Ga0070671_100057926
203 Ga0070674_100048053
204 Ga0070673_100054272
205 Ga0070667_100042774
206 Ga0070694_100005385
207 Ga0070694_100006971
208 Ga0070663_100199764
209 Ga0070678_100007947
210 Ga0070681_10057920
211 Ga0070681_10059984
212 Ga0068867_100082258
213 Ga0070706_100170282
214 Ga0070698_100003501
215 Ga0070698_100055327
216 Ga0070699_100204723
217 Ga0070679_100102895
218 Ga0070684_100065061
219 Ga0070697_100027177
220 Ga0068853_100001106
221 Ga0068853_100007496
222 Ga0070695_100002344
223 Ga0070695_100011216
224 Ga0070696_100015326
225 Ga0070696_100156142
226 Ga0070693_100009266
227 Ga0070693_100017289
228 Ga0070704_100014530
229 Ga0070704_100044800
230 Ga0068855_100054379
231 Ga0070664_100029995
232 Ga0068857_100191056
233 Ga0068852_100379518
234 Ga0068859_100025041
235 Ga0068851_10032337
236 Ga0068863_100000490
237 Ga0068863_100030589
238 Ga0068858_100112882
239 Ga0068860_100004380
240 Ga0081455_10240083
241 Ga0070716_100149429
242 Ga0075366_10094645
243 Ga0068871_100130474
244 Ga0075434_100338048
245 Ga0097620_100025041
246 Ga0105240_10008213
247 Ga0105240_10478420
248 Ga0111539_10004591
249 Ga0111539_10529824
250 Ga0105247_10001033
251 Ga0105237_10023760
252 Ga0105249_10001259
253 Ga0105249_10185144
254 Ga0105249_10335293
255 Ga0105239_10161950
256 Ga0157371_10010568
257 Ga0157371_10141637
258 Ga0157374_10027106
259 Ga0157378_10002779
260 Ga0157378_10004718
261 Ga0157378_10041002
262 Ga0157372_10007410
263 Ga0157372_10011877
264 Ga0157372_10238739
265 Ga0157372_10290211
266 Ga0157375_10348942
267 Ga0163163_10012934
268 Ga0163163_10295409
269 Ga0157380_10000020
270 Ga0157380_10055781
271 Ga0157377_10019668
272 Ga0213876_10003058
273 Ga0209233_1006895
274 Ga0209676_1000841
275 Ga0209050_1025580
276 Ga0207656_10047245
277 Ga0207705_10155425
278 Ga0207654_10065642
279 Ga0207707_10000823
280 Ga0207695_10006041
281 Ga0207660_10123046
282 Ga0207652_10006622
283 Ga0207646_10134686
284 Ga0207650_10000886
285 Ga0207669_10034150
286 Ga0207665_10016477
287 Ga0207661_10008144
288 Ga0207679_10017645
289 Ga0207651_10010265
290 Ga0207651_10121135
291 Ga0207712_10000482
292 Ga0207639_10001901
293 Ga0207639_10007506
294 Ga0207639_10172342
295 Ga0207641_10024785
296 Ga0207641_10027386
297 Ga0207641_10121213
298 Ga0207648_10014598
299 Ga0207676_10130464
300 Ga0207676_10223102
301 Ga0207674_10087406
302 Ga0207674_10212951
303 Ga0207675_100062977
304 Ga0207698_10022168
305 Ga0207698_10122963
306 Ga0207428_10016729
307 Ga0207428_10083003
308 Ga0268265_10170475
309 Ga0268264_10100447
310 Ga0265318_10028085
311 Ga0265327_10000013
312 Ga0265327_10000168
313 Ga0265327_10011556
314 Ga0307509_10020519
315 Ga0307509_10026187
316 Ga0307408_100039156
317 Ga0307508_10000606
318 Ga0307508_10101776
319 Ga0307414_10207437
320 Ga0373937_0184261
321 Ga0395899_0001371
322 Ga0395900_0000203
323 Ga0395898_0001978
324 Ga0395905_0134503
325 Ga0395901_0008182
326 Ga0436365_1196296
327 Ga0451577_0275864
328 Ga0453684_0019697
329 Ga0466959_0064619
330 Ga0451576_0002069
331 Ga0451576_0007901
332 Ga0495651_0112720
333 Ga0495639_0102462
334 Ga0495608_0068000
335 Ga0495652_0081018
336 Ga0495621_0001697
337 Ga0495645_0016723
338 Ga0495604_0033035
339 Ga0495674_0062456
340 Ga0496104_0273291
341 Ga0501034_0000114
342 Ga0501034_0108675
343 Ga0501198_011042
344 Ga0501202_011178
345 Ga0501217_004123
346 Ga0501233_035820
347 Ga0501243_001615
348 Ga0501247_003038
349 Ga0501252_001880
350 Ga0501257_007271
351 Ga0501259_001264
352 Ga0501221_006276
353 Ga0501245_006784
354 Ga0501245_012608
355 Ga0501080_0145293
356 Ga0501044_0034949
357 Ga0501284_00511
358 nmdc:mga0k408_10436_c1
359 nmdc:mga0n895_334899_c1
360 Ga0500616_0076519
361 Ga0501084_0067985
362 Ga0501082_0010281
363 2522552061
364 2896089127

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07786

HGSNAT_cat

Heparan-alpha-glucosaminide N-acetyltransferase, catalytic

51

286

0.77

Structural Annotation

Top 5 Hits

ID Description Score Start End
6z16-assembly1.cif.gz_b structure of the mrp antiporter complex 0.3419 84 217
6z16-assembly1.cif.gz_b structure of the mrp antiporter complex 0.309 84 217
5oge-assembly3.cif.gz_C crystal structure of a nucleotide sugar transporter 0.2523 6 392
8phw-assembly1.cif.gz_A human oatp1b1 0.2473 68 397
5oge-assembly3.cif.gz_C crystal structure of a nucleotide sugar transporter 0.2365 6 392
ID Description Score Start End Superfamily
af_Q2G214_7_131_1.10.287.3510 Mainly Alpha;Orthogonal Bundle;Helix Hairpins; 0.3213 84 215 1.10.287.3510
af_Q7JZB1_1_323_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.3155 183 213 3.40.50.720
af_Q2G214_7_131_1.10.287.3510 Mainly Alpha;Orthogonal Bundle;Helix Hairpins; 0.3145 84 215 1.10.287.3510
af_Q54E82_206_395_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.3089 144 387 1.20.1250.20
af_Q2G1E2_243_458_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.3044 225 392 1.20.1250.20
ID Description Score Start End GO Terms
AF-A0A5B0FFB6-F1-model_v4 DUF1624 domain-containing protein 0.9905 11 398 GO:0016020
AF-A0A5B0FFB6-F1-model_v4 DUF1624 domain-containing protein 0.9804 11 398 GO:0016020
AF-A0A519ZYM1-F1-model_v4 DUF1624 domain-containing protein 0.9793 23 398 GO:0016020
AF-A0A6B9Z6L2-F1-model_v4 DUF1624 domain-containing protein 0.9786 24 398 GO:0016020
AF-A0A7W1W1B8-F1-model_v4 DUF1624 domain-containing protein 0.9775 11 333 GO:0016020

Map