F280824
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 183 | 150 | 135 | 824 |
Family's Representative Sequence
| Representative Sequence | 3300009553|Ga0105249_10068227|Ga0105249_100682271 |
| Length | 881 |
| Sequence | VCAFRIFPKGDKILTIRYKATRNGPKAATYQKNYYRPKVETVFLLPQKFGMNKTLLMLAGLAIFHVTMAQSNPPATDTNWKSIYRAVPEKINDLVHAKIDARFDFNQSRMKGKVWLTVQPHLYPVNNLELDAKGMDIHQVALVKGSSNQPLQFKYDGWILNIKLDKSYQQNEKYTVYVEYTAKPNDLKAKGSEAIKDARGLYFINPKGEEKNKPTQIWTQGETEGTSVWVPIIDKPNQKCTDEITMTVPDKFVTLSNGKLASQKKNSDGTRTDTWKMDLPHSPYLFFMGIGDYAVVKDKYKNMDVDYYVDPEFASVAKGIFGLTPQMIGFFEKITGVNYPWNKYAQITGHDYVSGAMENTTATLHSDAAQVDARQLIDGNEWETTIAHELFHQWFGDYATTKSWSNLTVNESFADYSEYLWLEHQYGLDKANEDNIDQMEAYTGSPAQEEKKLVRFYYADKEDMFDLVTYQKGGRILHMLRKYVGDSAFFKGLNLYLNTYKFSNTDANQLRLAIEQVSGKDLNWFFNQWYYGNGHPKLDIAYRYDDAAKKVVITVSQLQDGNLFKLPVAIDVYNGTSKQRREVWIENKVDTFVFAYKTKPDLVNVDAEKFTLCEKDDHKTLENFAFQFKNAQNYGDRREALAAAIREQQKPNALALLEAGLHDRYPGLRKMVLDSLDFRNQNIQTTFESSIAELAKTDKDPKVKGKALELLGFYKNPNYVSLFKQNINDSSYSVAGSALFGYTILDPSAGLVSARDIVKQPVRGKLAESVGIILMSLGGEEDFDNIAKTYSVLSGQEKLDAIDAFSAFLVRTQSTDKVKKGVDLIVDYRDHMSARNKDEIIPIINNVILKGIATQKSATKSGSTNAVELQKQIDYINEKIK |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2162886007 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 | Metagenome | Rhizosphere |
| 2 | 2511231000 | Chryseobacterium populi CF314 | Isolate | Rhizosphere |
| 3 | 2582581278 | Chryseobacterium sp. CF365 | Isolate | Rhizosphere |
| 4 | 2582581281 | Chryseobacterium sp. CF284 | Isolate | Rhizosphere |
| 5 | 2582581282 | Chryseobacterium sp. CF299 | Isolate | Rhizosphere |
| 6 | 2582581873 | Chryseobacterium sp. OV259 | Isolate | Rhizosphere |
| 7 | 2585428045 | Chryseobacterium sp. OV705 | Isolate | Rhizosphere |
| 8 | 2585428060 | Chryseobacterium sp. OV715 | Isolate | Rhizosphere |
| 9 | 2585428061 | Chryseobacterium sp. CF356 | Isolate | Rhizosphere |
| 10 | 2585428095 | Chryseobacterium sp. YR005 | Isolate | Rhizosphere |
| 11 | 2585428115 | Chryseobacterium sp. YR561 | Isolate | Rhizosphere |
| 12 | 2585428182 | Chryseobacterium sp. YR477 | Isolate | Rhizosphere |
| 13 | 2585428183 | Chryseobacterium sp. YR485 | Isolate | Rhizosphere |
| 14 | 2585428184 | Chryseobacterium sp. YR480 | Isolate | Rhizosphere |
| 15 | 2585428185 | Chryseobacterium sp. YR459 | Isolate | Rhizosphere |
| 16 | 2585428187 | Chryseobacterium sp. YR460 | Isolate | Rhizosphere |
| 17 | 2588253712 | Chryseobacterium sp. OV279 | Isolate | Rhizosphere |
| 18 | 2588254255 | Chryseobacterium sp. YR221 | Isolate | Rhizosphere |
| 19 | 2588254257 | Chryseobacterium sp. YR203 | Isolate | Rhizosphere |
| 20 | 2728369107 | Chryseobacterium kwangjuense KJ1R5 | Isolate | Unclassified |
| 21 | 2738541273 | Elizabethkingia sp. YR214 | Isolate | Unclassified |
| 22 | 2738541278 | Niastella sp. CF465 | Isolate | Unclassified |
| 23 | 2738543014 | Elizabethkingia sp. YR191 | Isolate | Unclassified |
| 24 | 2739367874 | Chryseobacterium sp. T16E-39 | Isolate | Unclassified |
| 25 | 2751185877 | Chryseobacterium artocarpi UTM-3 | Isolate | Rhizosphere |
| 26 | 2765235839 | Chryseobacterium indologenes AA5 | Isolate | Unclassified |
| 27 | 2772190705 | Chryseobacterium contaminans C-26 | Isolate | Rhizosphere |
| 28 | 2775506739 | Chryseobacterium sp. 1335 | Isolate | Unclassified |
| 29 | 2775506987 | Pedobacter ginsengisoli T01R-27 | Isolate | Unclassified |
| 30 | 2816332188 | Chryseobacterium aquifrigidense 110 (version 2) | Isolate | Unclassified |
| 31 | 2818991460 | Chitinophaga polysaccharea 1209 | Isolate | Unclassified |
| 32 | 2842083920 | Chryseobacterium lathyri KCTC 22544 | Isolate | Rhizosphere |
| 33 | 2871720351 | Chryseobacterium sp. KLBC 52 | Isolate | Nodule |
| 34 | 2884791551 | Chitinophaga oryzae 1310 | Isolate | Unclassified |
| 35 | 2889290771 | Chryseobacterium sp. PvR013 | Isolate | Rhizosphere |
| 36 | 2905999023 | Chryseobacterium elymi KCTC 22547 | Isolate | Rhizosphere |
| 37 | 2919097161 | Chryseobacterium ginsenosidimutans 1394 | Isolate | Rhizosphere |
| 38 | 2919399522 | Chryseobacterium sp. 2987 | Isolate | Unclassified |
| 39 | 2929177148 | Chitinophaga sp. R-72269 Hybrid assembly | Isolate | Unclassified |
| 40 | 2945924605 | Chryseobacterium ginsenosidimutans W1I9 | Isolate | Rhizosphere |
| 41 | 2945977869 | Chitinophaga sp. W2I13 | Isolate | Rhizosphere |
| 42 | 2946013367 | Chitinophaga sp. W3I9 | Isolate | Rhizosphere |
| 43 | 2946019816 | Chryseobacterium sp. W4I1 | Isolate | Rhizosphere |
| 44 | 2977232053 | Mucilaginibacter terrae SORGH_AS 422 | Isolate | Unclassified |
| 45 | 2977243572 | Chryseobacterium sp. SORGH_AS 447 | Isolate | Unclassified |
| 46 | 2984572630 | Chryseobacterium sp. SORGH_AS909 | Isolate | Aerial Root |
| 47 | 2984606641 | Chryseobacterium sp. SORGH_AS1175 | Isolate | Aerial Root |
| 48 | 2993372514 | Chryseobacterium sp. SLBN-27 | Isolate | Rhizosphere |
| 49 | 2993480792 | Chryseobacterium nepalense SLBN-92 | Isolate | Rhizosphere |
| 50 | 3300003320 | Sugarcane root Sample H2 | Metagenome | Unclassified |
| 51 | 3300005288 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) | Metagenome | Rhizosphere |
| 52 | 3300005289 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) | Metagenome | Rhizosphere |
| 53 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 54 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 55 | 3300005335 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG | Metagenome | Rhizosphere |
| 56 | 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Metagenome | Rhizosphere |
| 57 | 3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Metagenome | Rhizosphere |
| 58 | 3300005339 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG | Metagenome | Rhizosphere |
| 59 | 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Metagenome | Rhizosphere |
| 60 | 3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Metagenome | Rhizosphere |
| 61 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 62 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 63 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 64 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 65 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 66 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 67 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 68 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 69 | 3300006237 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300006358 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 | Metagenome | Rhizosphere |
| 71 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300009036 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG | Metagenome | Rhizosphere |
| 73 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 74 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 75 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 76 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 77 | 3300013100 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG | Metagenome | Rhizosphere |
| 78 | 3300013102 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG | Metagenome | Rhizosphere |
| 79 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 80 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 81 | 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Metagenome | Rhizosphere |
| 82 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 83 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 84 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 85 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 86 | 3300014497 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG | Metagenome | Rhizosphere |
| 87 | 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Metagenome | Rhizosphere |
| 88 | 3300015261 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG | Metagenome | Rhizosphere |
| 89 | 3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Metagenome | Rhizosphere |
| 90 | 3300021384 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 | Metagenome | Unclassified |
| 91 | 3300025284 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) | Metagenome | Endosphere |
| 92 | 3300025291 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 93 | 3300025302 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) | Metagenome | Endosphere |
| 94 | 3300025728 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 95 | 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 96 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 97 | 3300025917 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 98 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 99 | 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 100 | 3300025925 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 101 | 3300025935 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 102 | 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 103 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 104 | 3300026023 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 105 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 106 | 3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 107 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 108 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 109 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 110 | 3300031251 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG | Metagenome | Rhizosphere |
| 111 | 3300031507 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM | Metagenome | Unclassified |
| 112 | 3300031616 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM | Metagenome | Unclassified |
| 113 | 3300031911 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 | Metagenome | Rhizosphere |
| 114 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 115 | 3300032004 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 | Metagenome | Rhizosphere |
| 116 | 3300037312 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 | Metagenome | Rhizosphere |
| 117 | 3300039437 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 | Metagenome | Unclassified |
| 118 | 3300042004 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 | Metagenome | Rhizosphere |
| 119 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 120 | 3300044842 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R | Metagenome | Rhizosphere |
| 121 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 122 | 3300046453 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere | Metagenome | Rhizosphere |
| 123 | 3300046507 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere | Metagenome | Rhizosphere |
| 124 | 3300046512 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere | Metagenome | Rhizosphere |
| 125 | 3300046525 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere | Metagenome | Rhizosphere |
| 126 | 3300046530 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere | Metagenome | Rhizosphere |
| 127 | 3300046538 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere | Metagenome | Rhizosphere |
| 128 | 3300046558 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere | Metagenome | Rhizosphere |
| 129 | 3300047472 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere | Metagenome | Rhizosphere |
| 130 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 131 | 3300048919 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled | Metagenome | Unclassified |
| 132 | 3300048920 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 | Metagenome | Unclassified |
| 133 | 3300048921 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 | Metagenome | Unclassified |
| 134 | 3300048922 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 | Metagenome | Unclassified |
| 135 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 136 | 3300048926 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled | Metagenome | Unclassified |
| 137 | 3300048927 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 | Metagenome | Unclassified |
| 138 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 139 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 140 | 3300049570 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 141 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 142 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 143 | 3300049651 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F3_A_0_drought | Metagenome | Rhizosphere |
| 144 | 3300049652 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_A_0_drought | Metagenome | Rhizosphere |
| 145 | 3300049705 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought | Metagenome | Rhizosphere |
| 146 | 3300049758 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought | Metagenome | Rhizosphere |
| 147 | 3300049766 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_B_4_drought | Metagenome | Rhizosphere |
| 148 | 3300053093 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere | Metagenome | Endosphere |
| 149 | 3300053146 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere | Metagenome | Endosphere |
| 150 | 3300053153 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere | Metagenome | Endosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 73.77 |
| Metatranscriptomes | 0 |
| Isolates | 26.23 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 1.09 |
| Bulb | 0 |
| Endosphere | 3.28 |
| Nodule | 0.55 |
| Rhizoplane | 0.55 |
| Rhizosphere | 74.32 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 20.22 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | SwRhRL2b_contig_785041 | 2162886007 | Bacteria | 34032 |
| 2 | rootH2_10030252 | 3300003320 | Bacteria | 17172 |
| 3 | Ga0065714_10008304 | 3300005288 | Bacteria | 8263 |
| 4 | Ga0065714_10065189 | 3300005288 | Bacteria | 12111 |
| 5 | Ga0065704_10000310 | 3300005289 | Bacteria | 35517 |
| 6 | Ga0065704_10077948 | 3300005289 | Bacteria | 4572 |
| 7 | Ga0065704_10082880 | 3300005289 | Bacteria | 3535 |
| 8 | Ga0070658_10012892 | 3300005327 | Bacteria | 6710 |
| 9 | Ga0070683_100001412 | 3300005329 | Bacteria | 18434 |
| 10 | Ga0070666_10001407 | 3300005335 | Bacteria | 14545 |
| 11 | Ga0070680_100028446 | 3300005336 | Bacteria | 4483 |
| 12 | Ga0068868_100006299 | 3300005338 | Bacteria | 8387 |
| 13 | Ga0070660_100003004 | 3300005339 | Bacteria | 11618 |
| 14 | Ga0070668_100042321 | 3300005347 | Bacteria | 3491 |
| 15 | Ga0070671_100020412 | 3300005355 | Bacteria | 5404 |
| 16 | Ga0070681_10044401 | 3300005458 | Bacteria | 4448 |
| 17 | Ga0070679_100024005 | 3300005530 | Bacteria | 5973 |
| 18 | Ga0070684_100013311 | 3300005535 | Bacteria | 6629 |
| 19 | Ga0068855_100024773 | 3300005563 | Bacteria | 7179 |
| 20 | Ga0068855_100093065 | 3300005563 | Bacteria | 3476 |
| 21 | Ga0068852_100052545 | 3300005616 | Bacteria | 3502 |
| 22 | Ga0068859_100021348 | 3300005617 | Bacteria | 6498 |
| 23 | Ga0068863_100071053 | 3300005841 | Bacteria | 3293 |
| 24 | Ga0068860_100013193 | 3300005843 | Bacteria | 8108 |
| 25 | Ga0097621_100004095 | 3300006237 | Bacteria | 10111 |
| 26 | Ga0068871_100006152 | 3300006358 | Bacteria | 8459 |
| 27 | Ga0068871_100046824 | 3300006358 | Bacteria | 3485 |
| 28 | Ga0097620_100021348 | 3300006931 | Bacteria | 6498 |
| 29 | Ga0105244_10000001 | 3300009036 | Bacteria | 1034899 |
| 30 | Ga0105240_10000020 | 3300009093 | Bacteria | 399699 |
| 31 | Ga0105243_10002198 | 3300009148 | Bacteria | 16443 |
| 32 | Ga0105249_10068227 | 3300009553 | Unclassified | 3279 |
| 33 | Ga0105239_10000098 | 3300010375 | Bacteria | 120504 |
| 34 | Ga0157373_10000004 | 3300013100 | Bacteria | 275553 |
| 35 | Ga0157373_10001634 | 3300013100 | Bacteria | 17114 |
| 36 | Ga0157371_10000201 | 3300013102 | Bacteria | 87780 |
| 37 | Ga0157371_10000807 | 3300013102 | Bacteria | 35968 |
| 38 | Ga0157371_10001168 | 3300013102 | Bacteria | 28185 |
| 39 | Ga0157371_10002144 | 3300013102 | Bacteria | 19234 |
| 40 | Ga0157371_10014271 | 3300013102 | Bacteria | 6003 |
| 41 | Ga0157371_10041794 | 3300013102 | Bacteria | 3270 |
| 42 | Ga0157370_10010456 | 3300013104 | Bacteria | 9777 |
| 43 | Ga0157370_10016893 | 3300013104 | Bacteria | 7377 |
| 44 | Ga0157369_10000495 | 3300013105 | Bacteria | 52125 |
| 45 | Ga0157378_10019505 | 3300013297 | Bacteria | 5961 |
| 46 | Ga0157378_10036083 | 3300013297 | Bacteria | 4376 |
| 47 | Ga0163162_10015755 | 3300013306 | Bacteria | 7390 |
| 48 | Ga0157372_10000048 | 3300013307 | Bacteria | 142757 |
| 49 | Ga0157372_10036989 | 3300013307 | Bacteria | 5382 |
| 50 | Ga0157372_10122452 | 3300013307 | Bacteria | 2989 |
| 51 | Ga0157375_10001608 | 3300013308 | Bacteria | 19412 |
| 52 | Ga0157375_10018308 | 3300013308 | Bacteria | 6350 |
| 53 | Ga0163163_10000257 | 3300014325 | Bacteria | 53646 |
| 54 | Ga0182008_10000007 | 3300014497 | Bacteria | 372461 |
| 55 | Ga0182008_10000008 | 3300014497 | Bacteria | 371823 |
| 56 | Ga0157376_10008165 | 3300014969 | Bacteria | 7532 |
| 57 | Ga0182006_1000003 | 3300015261 | Bacteria | 826681 |
| 58 | Ga0163161_10000884 | 3300017792 | Bacteria | 23288 |
| 59 | Ga0163161_10012806 | 3300017792 | Bacteria | 5827 |
| 60 | Ga0163161_10014301 | 3300017792 | Bacteria | 5525 |
| 61 | Ga0213876_10007581 | 3300021384 | Bacteria | 5892 |
| 62 | Ga0209130_1002668 | 3300025284 | Bacteria | 8510 |
| 63 | Ga0209675_1000057 | 3300025291 | Bacteria | 185467 |
| 64 | Ga0207426_1000525 | 3300025302 | Bacteria | 55617 |
| 65 | Ga0207655_1000013 | 3300025728 | Bacteria | 637510 |
| 66 | Ga0207707_10062186 | 3300025912 | Bacteria | 3249 |
| 67 | Ga0207695_10000020 | 3300025913 | Bacteria | 723025 |
| 68 | Ga0207660_10043049 | 3300025917 | Bacteria | 3172 |
| 69 | Ga0207657_10004627 | 3300025919 | Bacteria | 14535 |
| 70 | Ga0207652_10006530 | 3300025921 | Bacteria | 9401 |
| 71 | Ga0207650_10025193 | 3300025925 | Bacteria | 4237 |
| 72 | Ga0207709_10000149 | 3300025935 | Bacteria | 96374 |
| 73 | Ga0207661_10001192 | 3300025944 | Bacteria | 17402 |
| 74 | Ga0207667_10000935 | 3300025949 | Bacteria | 37245 |
| 75 | Ga0207677_10023688 | 3300026023 | Bacteria | 3797 |
| 76 | Ga0207641_10026188 | 3300026088 | Bacteria | 4813 |
| 77 | Ga0207676_10024695 | 3300026095 | Bacteria | 4452 |
| 78 | Ga0207674_10050514 | 3300026116 | Bacteria | 4248 |
| 79 | Ga0268264_10012620 | 3300028381 | Bacteria | 6959 |
| 80 | Ga0307515_10000107 | 3300028794 | Bacteria | 197046 |
| 81 | Ga0265327_10000905 | 3300031251 | Bacteria | 43620 |
| 82 | Ga0307509_10062763 | 3300031507 | Bacteria | 3916 |
| 83 | Ga0307508_10010822 | 3300031616 | Bacteria | 8344 |
| 84 | Ga0307508_10092789 | 3300031616 | Bacteria | 2609 |
| 85 | Ga0307412_10000023 | 3300031911 | Bacteria | 237005 |
| 86 | Ga0307412_10000102 | 3300031911 | Bacteria | 69906 |
| 87 | Ga0307412_10000900 | 3300031911 | Bacteria | 17099 |
| 88 | Ga0307412_10003100 | 3300031911 | Bacteria | 9229 |
| 89 | Ga0307416_100000031 | 3300032002 | Bacteria | 159059 |
| 90 | Ga0307414_10000010 | 3300032004 | Bacteria | 357863 |
| 91 | Ga0307414_10022235 | 3300032004 | Bacteria | 3995 |
| 92 | Ga0395899_0000522 | 3300037312 | Bacteria | 42283 |
| 93 | Ga0436365_0986049 | 3300039437 | Bacteria | 3984 |
| 94 | Ga0436365_1398823 | 3300039437 | Bacteria | 37103 |
| 95 | Ga0439445_0000217 | 3300042004 | Bacteria | 10610 |
| 96 | Ga0453684_0016378 | 3300044712 | Bacteria | 11598 |
| 97 | Ga0453684_0088838 | 3300044712 | Bacteria | 3825 |
| 98 | Ga0466957_0000222 | 3300044842 | Bacteria | 26750 |
| 99 | Ga0466959_0011490 | 3300045049 | Bacteria | 6365 |
| 100 | Ga0495627_000002 | 3300046453 | Bacteria | 903861 |
| 101 | Ga0495606_0028536 | 3300046507 | Bacteria | 3935 |
| 102 | Ga0495610_0000006 | 3300046512 | Bacteria | 856822 |
| 103 | Ga0495663_0000790 | 3300046525 | Bacteria | 10823 |
| 104 | Ga0495654_0000006 | 3300046530 | Bacteria | 451432 |
| 105 | Ga0495609_0000047 | 3300046538 | Bacteria | 156247 |
| 106 | Ga0495633_0000003 | 3300046558 | Bacteria | 472476 |
| 107 | Ga0495686_0000206 | 3300047472 | Bacteria | 110350 |
| 108 | Ga0495686_0002572 | 3300047472 | Bacteria | 16900 |
| 109 | Ga0496102_0031070 | 3300048905 | Bacteria | 4787 |
| 110 | Ga0496116_0000006 | 3300048919 | Bacteria | 811937 |
| 111 | Ga0496117_0000027 | 3300048920 | Bacteria | 412234 |
| 112 | Ga0496118_0001435 | 3300048921 | Bacteria | 35889 |
| 113 | Ga0496119_0000205 | 3300048922 | Bacteria | 84036 |
| 114 | Ga0496122_0000073 | 3300048925 | Bacteria | 222403 |
| 115 | Ga0496122_0000431 | 3300048925 | Bacteria | 88444 |
| 116 | Ga0496122_0001327 | 3300048925 | Bacteria | 40506 |
| 117 | Ga0496122_0001417 | 3300048925 | Bacteria | 38842 |
| 118 | Ga0496123_0001190 | 3300048926 | Bacteria | 38293 |
| 119 | Ga0496124_0001294 | 3300048927 | Bacteria | 37979 |
| 120 | Ga0496125_0000622 | 3300048928 | Bacteria | 59554 |
| 121 | Ga0496125_0019905 | 3300048928 | Bacteria | 6311 |
| 122 | Ga0496125_0024390 | 3300048928 | Bacteria | 5564 |
| 123 | Ga0496126_0005470 | 3300048929 | Bacteria | 14481 |
| 124 | Ga0501033_0023703 | 3300049570 | Bacteria | 4629 |
| 125 | Ga0501034_0000111 | 3300049571 | Bacteria | 150159 |
| 126 | Ga0501034_0131432 | 3300049571 | Bacteria | 2486 |
| 127 | Ga0501047_0025125 | 3300049581 | Bacteria | 5723 |
| 128 | Ga0501201_000354 | 3300049651 | Bacteria | 4240 |
| 129 | Ga0501202_001127 | 3300049652 | Bacteria | 4174 |
| 130 | Ga0501225_0002998 | 3300049705 | Bacteria | 5157 |
| 131 | Ga0501241_000399 | 3300049758 | Bacteria | 9520 |
| 132 | Ga0501269_000428 | 3300049766 | Bacteria | 9482 |
| 133 | Ga0500651_0000111 | 3300053093 | Bacteria | 50030 |
| 134 | Ga0500588_0000849 | 3300053146 | Bacteria | 5335 |
| 135 | Ga0500616_0029048 | 3300053153 | Bacteria | 3044 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300013102 | Ga0157371_10014271 | Ga0157371_100142713 | 659 |
| 2 | 3300049571 | Ga0501034_0131432 | Ga0501034_0131432_345_2471 | 664 |
| 3 | 3300044712 | Ga0453684_0088838 | Ga0453684_0088838_538_3006 | 709 |
| 4 | 3300021384 | Ga0213876_10007581 | Ga0213876_100075813 | 740 |
| 5 | 3300039437 | Ga0436365_1398823 | Ga0436365_1398823_2639_5137 | 740 |
| 6 | 3300005563 | Ga0068855_100093065 | Ga0068855_1000930651 | 746 |
| 7 | 3300005327 | Ga0070658_10012892 | Ga0070658_100128925 | 750 |
| 8 | 3300049570 | Ga0501033_0023703 | Ga0501033_0023703_2166_4619 | 750 |
| 9 | 3300005563 | Ga0068855_100024773 | Ga0068855_1000247736 | 751 |
| 10 | 3300013307 | Ga0157372_10122452 | Ga0157372_101224521 | 751 |
| 11 | 3300025949 | Ga0207667_10000935 | Ga0207667_100009354 | 751 |
| 12 | 3300013102 | Ga0157371_10041794 | Ga0157371_100417942 | 753 |
| 13 | 3300013307 | Ga0157372_10036989 | Ga0157372_100369891 | 753 |
| 14 | 3300025917 | Ga0207660_10043049 | Ga0207660_100430491 | 753 |
| 15 | 3300025921 | Ga0207652_10006530 | Ga0207652_100065302 | 753 |
| 16 | 3300005336 | Ga0070680_100028446 | Ga0070680_1000284462 | 754 |
| 17 | 3300005530 | Ga0070679_100024005 | Ga0070679_1000240052 | 754 |
| 18 | 3300005616 | Ga0068852_100052545 | Ga0068852_1000525451 | 758 |
| 19 | 3300005338 | Ga0068868_100006299 | Ga0068868_1000062997 | 760 |
| 20 | 3300013297 | Ga0157378_10036083 | Ga0157378_100360832 | 760 |
| 21 | 3300026023 | Ga0207677_10023688 | Ga0207677_100236882 | 760 |
| 22 | 3300025284 | Ga0209130_1002668 | Ga0209130_10026684 | 769 |
| 23 | 3300025302 | Ga0207426_1000525 | Ga0207426_10005256 | 769 |
| 24 | 3300031251 | Ga0265327_10000905 | Ga0265327_1000090528 | 773 |
| 25 | 3300028794 | Ga0307515_10000107 | Ga0307515_100001074 | 774 |
| 26 | 3300039437 | Ga0436365_0986049 | Ga0436365_0986049_1502_3964 | 775 |
| 27 | 3300031507 | Ga0307509_10062763 | Ga0307509_100627632 | 778 |
| 28 | 3300053153 | Ga0500616_0029048 | Ga0500616_0029048_360_2837 | 778 |
| 29 | 3300014969 | Ga0157376_10008165 | Ga0157376_100081654 | 779 |
| 30 | 3300013105 | Ga0157369_10000495 | Ga0157369_1000049515 | 781 |
| 31 | 3300013102 | Ga0157371_10002144 | Ga0157371_1000214412 | 782 |
| 32 | 3300013307 | Ga0157372_10000048 | Ga0157372_1000004898 | 782 |
| 33 | 3300037312 | Ga0395899_0000522 | Ga0395899_0000522_8176_10668 | 782 |
| 34 | 3300005617 | Ga0068859_100021348 | Ga0068859_1000213482 | 783 |
| 35 | 3300005843 | Ga0068860_100013193 | Ga0068860_1000131937 | 783 |
| 36 | 3300006931 | Ga0097620_100021348 | Ga0097620_1000213482 | 783 |
| 37 | 3300013297 | Ga0157378_10019505 | Ga0157378_100195052 | 783 |
| 38 | 3300028381 | Ga0268264_10012620 | Ga0268264_100126202 | 783 |
| 39 | 3300031616 | Ga0307508_10092789 | Ga0307508_100927891 | 783 |
| 40 | 3300005339 | Ga0070660_100003004 | Ga0070660_1000030044 | 784 |
| 41 | 3300013102 | Ga0157371_10000807 | Ga0157371_100008074 | 784 |
| 42 | 3300014325 | Ga0163163_10000257 | Ga0163163_1000025740 | 784 |
| 43 | 3300025919 | Ga0207657_10004627 | Ga0207657_100046279 | 784 |
| 44 | 3300026095 | Ga0207676_10024695 | Ga0207676_100246952 | 784 |
| 45 | 3300005347 | Ga0070668_100042321 | Ga0070668_1000423213 | 785 |
| 46 | 3300013104 | Ga0157370_10016893 | Ga0157370_100168934 | 785 |
| 47 | 3300048925 | Ga0496122_0000073 | Ga0496122_0000073_74094_76604 | 785 |
| 48 | 3300049571 | Ga0501034_0000111 | Ga0501034_0000111_143664_146105 | 785 |
| 49 | 3300049652 | Ga0501202_001127 | Ga0501202_001127_1713_4148 | 785 |
| 50 | 3300031616 | Ga0307508_10010822 | Ga0307508_100108225 | 786 |
| 51 | 3300053146 | Ga0500588_0000849 | Ga0500588_0000849_2653_5166 | 786 |
| 52 | 3300006237 | Ga0097621_100004095 | Ga0097621_1000040955 | 787 |
| 53 | 3300006358 | Ga0068871_100046824 | Ga0068871_1000468242 | 787 |
| 54 | 3300026116 | Ga0207674_10050514 | Ga0207674_100505142 | 787 |
| 55 | 3300044712 | Ga0453684_0016378 | Ga0453684_0016378_840_3404 | 788 |
| 56 | 3300013102 | Ga0157371_10000201 | Ga0157371_1000020127 | 789 |
| 57 | 3300025925 | Ga0207650_10025193 | Ga0207650_100251932 | 789 |
| 58 | 3300045049 | Ga0466959_0011490 | Ga0466959_0011490_926_3418 | 789 |
| 59 | 3300003320 | rootH2_10030252 | rootH2_1003025212 | 790 |
| 60 | 3300044842 | Ga0466957_0000222 | Ga0466957_0000222_22264_24774 | 792 |
| 61 | 3300049705 | Ga0501225_0002998 | Ga0501225_0002998_946_3456 | 792 |
| 62 | iso_pu_bacteria | 2738541278 | 2738724134 | 792 |
| 63 | 3300047472 | Ga0495686_0000206 | Ga0495686_0000206_29948_32458 | 793 |
| 64 | iso_pu_bacteria | 2585428060 | 2587745865 | 793 |
| 65 | iso_pu_bacteria | 2585428187 | 2588231330 | 793 |
| 66 | iso_pu_bacteria | 2588253712 | 2588444392 | 793 |
| 67 | 3300005288 | Ga0065714_10065189 | Ga0065714_100651898 | 794 |
| 68 | 3300005289 | Ga0065704_10082880 | Ga0065704_100828801 | 794 |
| 69 | 3300005329 | Ga0070683_100001412 | Ga0070683_10000141216 | 794 |
| 70 | 3300005335 | Ga0070666_10001407 | Ga0070666_100014079 | 794 |
| 71 | 3300005535 | Ga0070684_100013311 | Ga0070684_1000133112 | 794 |
| 72 | 3300009036 | Ga0105244_10000001 | Ga0105244_10000001149 | 794 |
| 73 | 3300009148 | Ga0105243_10002198 | Ga0105243_1000219812 | 794 |
| 74 | 3300009553 | Ga0105249_10068227 | Ga0105249_100682271 | 794 |
| 75 | 3300013100 | Ga0157373_10000004 | Ga0157373_10000004199 | 794 |
| 76 | 3300013104 | Ga0157370_10010456 | Ga0157370_100104563 | 794 |
| 77 | 3300013308 | Ga0157375_10001608 | Ga0157375_1000160811 | 794 |
| 78 | 3300014497 | Ga0182008_10000007 | Ga0182008_10000007189 | 794 |
| 79 | 3300015261 | Ga0182006_1000003 | Ga0182006_100000396 | 794 |
| 80 | 3300017792 | Ga0163161_10000884 | Ga0163161_100008849 | 794 |
| 81 | 3300017792 | Ga0163161_10014301 | Ga0163161_100143014 | 794 |
| 82 | 3300025291 | Ga0209675_1000057 | Ga0209675_100005799 | 794 |
| 83 | 3300025728 | Ga0207655_1000013 | Ga0207655_1000013274 | 794 |
| 84 | 3300025935 | Ga0207709_10000149 | Ga0207709_1000014964 | 794 |
| 85 | 3300025944 | Ga0207661_10001192 | Ga0207661_100011929 | 794 |
| 86 | 3300031911 | Ga0307412_10000102 | Ga0307412_1000010243 | 794 |
| 87 | 3300031911 | Ga0307412_10000900 | Ga0307412_1000090015 | 794 |
| 88 | 3300031911 | Ga0307412_10003100 | Ga0307412_100031008 | 794 |
| 89 | 3300032002 | Ga0307416_100000031 | Ga0307416_100000031109 | 794 |
| 90 | 3300032004 | Ga0307414_10000010 | Ga0307414_10000010172 | 794 |
| 91 | 3300042004 | Ga0439445_0000217 | Ga0439445_0000217_1860_4373 | 794 |
| 92 | 3300046453 | Ga0495627_000002 | Ga0495627_000002_638191_640704 | 794 |
| 93 | 3300046507 | Ga0495606_0028536 | Ga0495606_0028536_314_2824 | 794 |
| 94 | 3300046512 | Ga0495610_0000006 | Ga0495610_0000006_768877_771387 | 794 |
| 95 | 3300046525 | Ga0495663_0000790 | Ga0495663_0000790_7929_10439 | 794 |
| 96 | 3300046530 | Ga0495654_0000006 | Ga0495654_0000006_338163_340676 | 794 |
| 97 | 3300046538 | Ga0495609_0000047 | Ga0495609_0000047_101130_103640 | 794 |
| 98 | 3300046558 | Ga0495633_0000003 | Ga0495633_0000003_162436_164949 | 794 |
| 99 | 3300047472 | Ga0495686_0002572 | Ga0495686_0002572_9455_11968 | 794 |
| 100 | 3300048905 | Ga0496102_0031070 | Ga0496102_0031070_967_3477 | 794 |
| 101 | 3300048919 | Ga0496116_0000006 | Ga0496116_0000006_323782_326292 | 794 |
| 102 | 3300048920 | Ga0496117_0000027 | Ga0496117_0000027_31444_33954 | 794 |
| 103 | 3300048921 | Ga0496118_0001435 | Ga0496118_0001435_31416_33926 | 794 |
| 104 | 3300048922 | Ga0496119_0000205 | Ga0496119_0000205_31444_33954 | 794 |
| 105 | 3300048925 | Ga0496122_0000431 | Ga0496122_0000431_6673_9183 | 794 |
| 106 | 3300048925 | Ga0496122_0001327 | Ga0496122_0001327_6551_9061 | 794 |
| 107 | 3300048925 | Ga0496122_0001417 | Ga0496122_0001417_30190_32700 | 794 |
| 108 | 3300048926 | Ga0496123_0001190 | Ga0496123_0001190_16406_18916 | 794 |
| 109 | 3300048927 | Ga0496124_0001294 | Ga0496124_0001294_32639_35149 | 794 |
| 110 | 3300048928 | Ga0496125_0000622 | Ga0496125_0000622_18124_20634 | 794 |
| 111 | 3300048928 | Ga0496125_0019905 | Ga0496125_0019905_1132_3642 | 794 |
| 112 | 3300048928 | Ga0496125_0024390 | Ga0496125_0024390_1493_4006 | 794 |
| 113 | 3300048929 | Ga0496126_0005470 | Ga0496126_0005470_7184_9694 | 794 |
| 114 | 3300049581 | Ga0501047_0025125 | Ga0501047_0025125_1639_4137 | 794 |
| 115 | 3300049758 | Ga0501241_000399 | Ga0501241_000399_5379_7892 | 794 |
| 116 | 3300049766 | Ga0501269_000428 | Ga0501269_000428_5266_7779 | 794 |
| 117 | iso_pu_bacteria | 2511231000 | 2511232499 | 794 |
| 118 | iso_pu_bacteria | 2582581278 | 2585143861 | 794 |
| 119 | iso_pu_bacteria | 2582581281 | 2585158711 | 794 |
| 120 | iso_pu_bacteria | 2582581282 | 2585162998 | 794 |
| 121 | iso_pu_bacteria | 2582581873 | 2585424369 | 794 |
| 122 | iso_pu_bacteria | 2585428045 | 2587681344 | 794 |
| 123 | iso_pu_bacteria | 2585428061 | 2587751069 | 794 |
| 124 | iso_pu_bacteria | 2585428095 | 2587865276 | 794 |
| 125 | iso_pu_bacteria | 2585428115 | 2587944130 | 794 |
| 126 | iso_pu_bacteria | 2585428182 | 2588210065 | 794 |
| 127 | iso_pu_bacteria | 2585428183 | 2588214732 | 794 |
| 128 | iso_pu_bacteria | 2585428184 | 2588217960 | 794 |
| 129 | iso_pu_bacteria | 2585428185 | 2588222837 | 794 |
| 130 | iso_pu_bacteria | 2588254255 | 2590601305 | 794 |
| 131 | iso_pu_bacteria | 2588254257 | 2590613234 | 794 |
| 132 | iso_pu_bacteria | 2728369107 | 2729199784 | 794 |
| 133 | iso_pu_bacteria | 2738541273 | 2738699918 | 794 |
| 134 | iso_pu_bacteria | 2738543014 | 2739253667 | 794 |
| 135 | iso_pu_bacteria | 2739367874 | 2740058806 | 794 |
| 136 | iso_pu_bacteria | 2751185877 | 2753674332 | 794 |
| 137 | iso_pu_bacteria | 2765235839 | 2765573969 | 794 |
| 138 | iso_pu_bacteria | 2772190705 | 2772605049 | 794 |
| 139 | iso_pu_bacteria | 2775506739 | 2775672135 | 794 |
| 140 | iso_pu_bacteria | 2816332188 | 2816874184 | 794 |
| 141 | iso_pu_bacteria | 2842083920 | 2842086142 | 794 |
| 142 | iso_pu_bacteria | 2871720351 | 2871720421 | 794 |
| 143 | iso_pu_bacteria | 2889290771 | 2889295534 | 794 |
| 144 | iso_pu_bacteria | 2905999023 | 2906002891 | 794 |
| 145 | iso_pu_bacteria | 2919097161 | 2919100551 | 794 |
| 146 | iso_pu_bacteria | 2919399522 | 2919401070 | 794 |
| 147 | iso_pu_bacteria | 2945924605 | 2945926188 | 794 |
| 148 | iso_pu_bacteria | 2946019816 | 2946022433 | 794 |
| 149 | iso_pu_bacteria | 2977243572 | 2977245173 | 794 |
| 150 | iso_pu_bacteria | 2984572630 | 2984572917 | 794 |
| 151 | iso_pu_bacteria | 2984606641 | 2984610366 | 794 |
| 152 | iso_pu_bacteria | 2993372514 | 2993374462 | 794 |
| 153 | iso_pu_bacteria | 2993480792 | 2993481347 | 794 |
| 154 | 3300005355 | Ga0070671_100020412 | Ga0070671_1000204123 | 795 |
| 155 | 3300005841 | Ga0068863_100071053 | Ga0068863_1000710532 | 795 |
| 156 | 3300006358 | Ga0068871_100006152 | Ga0068871_1000061525 | 795 |
| 157 | 3300013306 | Ga0163162_10015755 | Ga0163162_100157554 | 795 |
| 158 | 3300013308 | Ga0157375_10018308 | Ga0157375_100183086 | 795 |
| 159 | 3300017792 | Ga0163161_10012806 | Ga0163161_100128063 | 795 |
| 160 | 3300026088 | Ga0207641_10026188 | Ga0207641_100261883 | 795 |
| 161 | 3300005458 | Ga0070681_10044401 | Ga0070681_100444014 | 796 |
| 162 | 3300009093 | Ga0105240_10000020 | Ga0105240_10000020137 | 796 |
| 163 | 3300010375 | Ga0105239_10000098 | Ga0105239_1000009846 | 796 |
| 164 | 3300025912 | Ga0207707_10062186 | Ga0207707_100621862 | 796 |
| 165 | 3300025913 | Ga0207695_10000020 | Ga0207695_10000020390 | 796 |
| 166 | 3300049651 | Ga0501201_000354 | Ga0501201_000354_1746_4214 | 796 |
| 167 | iso_pu_bacteria | 2884791551 | 2884796114 | 796 |
| 168 | iso_pu_bacteria | 2818991460 | 2819676285 | 798 |
| 169 | iso_pu_bacteria | 2929177148 | 2929178375 | 798 |
| 170 | iso_pu_bacteria | 2945977869 | 2945980747 | 798 |
| 171 | iso_pu_bacteria | 2946013367 | 2946013387 | 798 |
| 172 | 2162886007 | SwRhRL2b_contig_785041 | SwRhRL2b_0073.00004270 | 800 |
| 173 | 3300005288 | Ga0065714_10008304 | Ga0065714_100083044 | 800 |
| 174 | 3300005289 | Ga0065704_10000310 | Ga0065704_100003103 | 800 |
| 175 | 3300005289 | Ga0065704_10077948 | Ga0065704_100779482 | 800 |
| 176 | 3300013100 | Ga0157373_10001634 | Ga0157373_100016344 | 800 |
| 177 | 3300013102 | Ga0157371_10001168 | Ga0157371_1000116816 | 800 |
| 178 | 3300014497 | Ga0182008_10000008 | Ga0182008_10000008252 | 800 |
| 179 | 3300031911 | Ga0307412_10000023 | Ga0307412_1000002385 | 800 |
| 180 | 3300032004 | Ga0307414_10022235 | Ga0307414_100222352 | 800 |
| 181 | 3300053093 | Ga0500651_0000111 | Ga0500651_0000111_25823_28300 | 800 |
| 182 | iso_pu_bacteria | 2775506987 | 2776612597 | 800 |
| 183 | iso_pu_bacteria | 2977232053 | 2977234056 | 800 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 6a8z-assembly2.cif.gz_B | crystal structure of m1 zinc metallopeptidase from deinococcus radiodurans | 0.8818 | 15 | 462 |
| 6iff-assembly2.cif.gz_B | crystal structure of m1 zinc metallopeptidase e323a mutant from deinococcus radiodurans | 0.8718 | 15 | 460 |
| 6a8z-assembly1.cif.gz_A | crystal structure of m1 zinc metallopeptidase from deinococcus radiodurans | 0.8653 | 10 | 467 |
| 6kp0-assembly1.cif.gz_A | crystal structure of two domain m1 zinc metallopeptidase e323a mutant bound to l-arginine | 0.8609 | 16 | 464 |
| 6kp0-assembly2.cif.gz_B | crystal structure of two domain m1 zinc metallopeptidase e323a mutant bound to l-arginine | 0.8588 | 16 | 467 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_Q2KHK3_314_553_1.10.390.10 | Mainly Alpha;Orthogonal Bundle;Neutral Protease; domain 2;Neutral Protease Domain 2 | 0.8993 | 225 | 448 | 1.10.390.10 |
| af_Q4E686_206_448_1.10.390.10 | Mainly Alpha;Orthogonal Bundle;Neutral Protease; domain 2;Neutral Protease Domain 2 | 0.8925 | 225 | 465 | 1.10.390.10 |
| af_Q8H0S9_448_556_2.60.40.1840 | Mainly Beta;Sandwich;Immunoglobulin-like;Aminopeptidase N, middle-beta domain | 0.8891 | 465 | 547 | 2.60.40.1840 |
| af_A0A0R4ICL9_286_533_1.10.390.10 | Mainly Alpha;Orthogonal Bundle;Neutral Protease; domain 2;Neutral Protease Domain 2 | 0.889 | 225 | 465 | 1.10.390.10 |
| af_I1K8E3_209_456_1.10.390.10 | Mainly Alpha;Orthogonal Bundle;Neutral Protease; domain 2;Neutral Protease Domain 2 | 0.8873 | 223 | 465 | 1.10.390.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A7K1UCZ2-F1-model_v4 | Aminopeptidase N (EC 3.4.11.2) | 0.9822 | 8 | 658 |
GO:0005615
GO:0005737 GO:0006508 GO:0008270 GO:0016020 GO:0042277 GO:0043171 GO:0070006 |
| AF-A0A3D3PA13-F1-model_v4 | Aminopeptidase N (EC 3.4.11.2) | 0.9727 | 12 | 358 |
GO:0005615
GO:0005737 GO:0006508 GO:0008270 GO:0016020 GO:0042277 GO:0043171 GO:0070006 |
| AF-A0A7Y6Y445-F1-model_v4 | Aminopeptidase N (EC 3.4.11.2) | 0.9707 | 8 | 376 |
GO:0005615
GO:0005737 GO:0006508 GO:0008270 GO:0016020 GO:0042277 GO:0043171 GO:0070006 |
| AF-A0A4Q3DLT8-F1-model_v4 | M1 family peptidase | 0.9657 | 12 | 229 |
GO:0005615
GO:0005737 GO:0008270 GO:0016020 GO:0042277 GO:0043171 GO:0070006 |
| AF-A0A2M7RX50-F1-model_v4 | Aminopeptidase N-like N-terminal domain-containing protein | 0.9609 | 13 | 188 |
|
Predicted Structure (AlphaFold2)
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