F280781

General Info

Members Datasets Scaffolds Average Seq Length
183 144 366 253

Family's Representative Sequence

Representative Sequence 3300009147|Ga0114129_10356077|Ga0114129_103560772
Length 286
Sequence MQESSDFRNFPFSAPVIWQANTEVPRPEPIGYSSRMIKGQKVVVVMPAYNAEQTIEKTWREVLEQEVVDLVIVVDDASKDKTVELARRLDQVVVHVHARNSGYGANQKTCYRLALENRADIVIMVHPDYQYTPKLIPAMAGMVASGLYPCVLASRILGGQALHGGMPRWRYDANRGLTLVGNILLGTKLSEFHTGYRAFSRKLLERLPLAQNSDDFVFDNEILAETVWLEYQIGEVSCPTSYAPDASSINFRRSVRYGFGCLKTALLFRLAKWNLFHSPRFPRRVA

Samples

Sample ID Description Type Environment
1 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
2 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
3 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
4 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
8 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
9 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
10 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
11 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
12 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
13 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
14 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
15 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
16 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
17 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
18 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
19 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
20 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
21 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
22 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
23 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
24 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
25 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
26 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
27 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
28 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
29 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
30 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
31 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
32 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
33 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
34 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
35 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
36 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
37 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
38 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
39 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
40 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
41 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
42 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
43 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
44 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
45 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
46 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
47 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
48 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
49 3300020077 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
50 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
51 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
52 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
75 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
76 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
77 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
78 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
79 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
80 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
81 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
82 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
83 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
84 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
85 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
86 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
87 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
88 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
89 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
90 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
91 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
92 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
93 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
94 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
95 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
96 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
97 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
98 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
99 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
100 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
101 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
102 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
103 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
104 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
105 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
106 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
107 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
108 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
109 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
110 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
111 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
112 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
113 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
114 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
115 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
116 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
117 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
118 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
119 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
120 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
121 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
122 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
123 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
124 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
125 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
126 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
127 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
128 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
129 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
130 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
131 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
132 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
133 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
134 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
135 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
136 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
137 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
138 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
139 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
140 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
141 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
142 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
143 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
144 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.91
Metatranscriptomes 1.09
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 2.19
Rhizosphere 97.81
Stem 0
Stem Tuber 0
Unclassified 19.13

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0114129_10356077 3300009147 Bacteria 1938
2 Ga0065712_10068390 3300005290 Bacteria 11008
3 Ga0065715_10005873 3300005293 Bacteria 3858
4 Ga0065715_10007735 3300005293 Unclassified 2824
5 Ga0065707_10310698 3300005295 Unclassified 985
6 Ga0070670_100038164 3300005331 Unclassified 4130
7 Ga0070680_100224652 3300005336 Bacteria 1585
8 Ga0070682_100219640 3300005337 Bacteria 1352
9 Ga0070660_100030688 3300005339 Bacteria 4033
10 Ga0070688_100178858 3300005365 Unclassified 1470
11 Ga0070659_100139708 3300005366 Bacteria 1972
12 Ga0070709_10202255 3300005434 Bacteria 1407
13 Ga0070714_100176881 3300005435 Bacteria 1939
14 Ga0070713_100111984 3300005436 Bacteria 2381
15 Ga0070713_100308753 3300005436 Bacteria 1458
16 Ga0070710_10141076 3300005437 Bacteria 1478
17 Ga0070681_10412692 3300005458 Bacteria 1262
18 Ga0070706_100259628 3300005467 Bacteria 1622
19 Ga0070679_100331347 3300005530 Bacteria 1471
20 Ga0070684_100774846 3300005535 Bacteria 896
21 Ga0070697_100031284 3300005536 Bacteria 4280
22 Ga0070697_100092587 3300005536 Bacteria 2501
23 Ga0070672_100198987 3300005543 Unclassified 1675
24 Ga0070696_100121596 3300005546 Bacteria 1890
25 Ga0070664_100316141 3300005564 Bacteria 1414
26 Ga0070664_100336982 3300005564 Bacteria 1369
27 Ga0068857_100030881 3300005577 Unclassified 4734
28 Ga0068859_100129629 3300005617 Unclassified 2593
29 Ga0068864_100435730 3300005618 Bacteria 1251
30 Ga0068864_100878267 3300005618 Unclassified 885
31 Ga0068860_100011730 3300005843 Bacteria 8636
32 Ga0068860_100072977 3300005843 Bacteria 3262
33 Ga0081455_10116680 3300005937 Bacteria 2111
34 Ga0070717_10341220 3300006028 Bacteria 1338
35 Ga0070712_100014948 3300006175 Bacteria 4990
36 Ga0070712_100027914 3300006175 Unclassified 3771
37 Ga0075428_100220214 3300006844 Bacteria 2049
38 Ga0075430_100098024 3300006846 Bacteria 2449
39 Ga0075431_100124080 3300006847 Bacteria 2664
40 Ga0075434_100137235 3300006871 Unclassified 2465
41 Ga0075429_100253422 3300006880 Bacteria 1541
42 Ga0075436_100227957 3300006914 Bacteria 1323
43 Ga0097620_100129616 3300006931 Unclassified 2593
44 Ga0075435_100154329 3300007076 Bacteria 1932
45 Ga0099794_10161797 3300007265 Bacteria 1139
46 Ga0105240_10118865 3300009093 Unclassified 3185
47 Ga0111539_10457463 3300009094 Bacteria 1486
48 Ga0114129_10003968 3300009147 Bacteria 20896
49 Ga0114129_10023168 3300009147 Bacteria 8806
50 Ga0114129_10025249 3300009147 Bacteria 8418
51 Ga0114129_10048691 3300009147 Bacteria 5956
52 Ga0114129_10246496 3300009147 Unclassified 2400
53 Ga0105242_10158264 3300009176 Unclassified 1980
54 Ga0105248_10221924 3300009177 Bacteria 2128
55 Ga0105248_10449827 3300009177 Unclassified 1451
56 Ga0105239_10207163 3300010375 Bacteria 2197
57 Ga0157369_10089437 3300013105 Unclassified 3287
58 Ga0157374_10185698 3300013296 Unclassified 2032
59 Ga0163162_10226738 3300013306 Bacteria 1998
60 Ga0163162_10881199 3300013306 Bacteria 1009
61 Ga0157375_10261084 3300013308 Unclassified 1894
62 Ga0157380_10011629 3300014326 Bacteria 6362
63 Ga0157380_10786917 3300014326 Bacteria 967
64 Ga0206351_10483904 3300020077 Archaea 1235
65 Ga0206353_10591682 3300020082 Bacteria 931
66 Ga0213871_10016705 3300021441 Bacteria 1773
67 Ga0207699_10350264 3300025906 Bacteria 1042
68 Ga0207707_10062053 3300025912 Bacteria 3252
69 Ga0207695_10015933 3300025913 Bacteria 8828
70 Ga0207693_10018554 3300025915 Bacteria 5539
71 Ga0207693_10030949 3300025915 Unclassified 4227
72 Ga0207663_10022005 3300025916 Unclassified 3638
73 Ga0207660_10354716 3300025917 Unclassified 1176
74 Ga0207657_10112582 3300025919 Bacteria 2246
75 Ga0207652_10481927 3300025921 Bacteria 1117
76 Ga0207700_10145818 3300025928 Bacteria 1951
77 Ga0207664_10247913 3300025929 Bacteria 1553
78 Ga0207690_10190348 3300025932 Bacteria 1551
79 Ga0207686_10344265 3300025934 Unclassified 1120
80 Ga0207709_10322181 3300025935 Bacteria 1157
81 Ga0207665_10192873 3300025939 Bacteria 1481
82 Ga0207691_10228984 3300025940 Unclassified 1610
83 Ga0207661_10075484 3300025944 Unclassified 2766
84 Ga0207651_10061485 3300025960 Unclassified 2613
85 Ga0207676_10399282 3300026095 Bacteria 1284
86 Ga0207674_10093256 3300026116 Bacteria 3000
87 Ga0207675_100756143 3300026118 Bacteria 983
88 Ga0268265_10010342 3300028380 Bacteria 6300
89 Ga0268264_10006603 3300028381 Bacteria 9755
90 Ga0268264_10021180 3300028381 Bacteria 5311
91 Ga0265338_10047141 3300028800 Bacteria 3940
92 Ga0265340_10027103 3300031247 Unclassified 2890
93 Ga0307410_10230521 3300031852 Bacteria 1430
94 Ga0307406_10237888 3300031901 Bacteria 1364
95 Ga0307406_10419332 3300031901 Bacteria 1066
96 Ga0307407_10197378 3300031903 Bacteria 1346
97 Ga0307412_10281337 3300031911 Bacteria 1306
98 Ga0373926_0033348 3300035083 Bacteria 1820
99 Ga0373934_0000316 3300035086 Bacteria 16956
100 Ga0373945_0072127 3300035116 Bacteria 1309
101 Ga0373956_0000827 3300035119 Bacteria 12857
102 Ga0373957_0001241 3300035120 Bacteria 6817
103 Ga0373955_0016476 3300035172 Bacteria 3639
104 Ga0373955_0185684 3300035172 Bacteria 1235
105 Ga0373924_0081184 3300035410 Bacteria 1379
106 Ga0373931_0353722 3300035691 Bacteria 920
107 Ga0373927_0007735 3300035695 Bacteria 7272
108 Ga0373933_0001497 3300035724 Bacteria 13670
109 Ga0373937_0000180 3300036401 Bacteria 61995
110 Ga0373937_0245749 3300036401 Bacteria 1686
111 Ga0373937_0422260 3300036401 Bacteria 1266
112 Ga0373925_0149529 3300037068 Unclassified 1833
113 Ga0436360_0456331 3300039438 Unclassified 4342
114 Ga0451577_0000621 3300042876 Bacteria 56886
115 Ga0451577_0077677 3300042876 Bacteria 2960
116 Ga0453683_0086050 3300044673 Bacteria 1970
117 Ga0453684_0014204 3300044712 Bacteria 12783
118 Ga0451576_0000181 3300045051 Bacteria 158861
119 Ga0495629_0009162 3300046459 Bacteria 7248
120 Ga0495651_0288095 3300046462 Bacteria 1106
121 Ga0495580_0008738 3300046472 Bacteria 8026
122 Ga0495582_0024082 3300046473 Bacteria 3329
123 Ga0495639_0107248 3300046475 Bacteria 1323
124 Ga0495594_0001575 3300046499 Bacteria 11857
125 Ga0495628_0038608 3300046516 Bacteria 3822
126 Ga0495628_0158971 3300046516 Bacteria 1718
127 Ga0495628_0471474 3300046516 Bacteria 909
128 Ga0495642_0139045 3300046528 Bacteria 1048
129 Ga0495665_0149167 3300046531 Bacteria 1221
130 Ga0495586_0108747 3300046535 Bacteria 1542
131 Ga0495587_0219901 3300046536 Bacteria 1071
132 Ga0495645_0002296 3300046543 Bacteria 12989
133 Ga0495622_0125212 3300046557 Unclassified 1172
134 Ga0495599_0012831 3300046678 Bacteria 5171
135 Ga0495613_0075100 3300046689 Bacteria 2461
136 Ga0495600_0167509 3300046809 Bacteria 1419
137 Ga0495581_0019260 3300047315 Bacteria 3961
138 Ga0495674_0471232 3300047319 Bacteria 1007
139 Ga0495684_0055559 3300047471 Bacteria 3020
140 Ga0495684_0336326 3300047471 Bacteria 1076
141 Ga0495602_0158523 3300048088 Bacteria 1770
142 Ga0496104_0085049 3300048907 Archaea 3019
143 Ga0496106_0122847 3300048909 Bacteria 2031
144 Ga0496109_0238112 3300048912 Bacteria 1713
145 Ga0496110_0044638 3300048913 Bacteria 3871
146 Ga0501036_0446725 3300049572 Bacteria 1077
147 Ga0501036_0662275 3300049572 Unclassified 864
148 Ga0501039_0510790 3300049575 Unclassified 943
149 Ga0501041_0077393 3300049577 Unclassified 2046
150 Ga0501041_0335376 3300049577 Unclassified 955
151 Ga0501042_0102572 3300049578 Bacteria 2058
152 Ga0501073_0009551 3300049589 Bacteria 7155
153 Ga0501075_0153461 3300049591 Bacteria 1756
154 Ga0501076_0003410 3300049592 Bacteria 11157
155 Ga0501076_0108853 3300049592 Bacteria 2239
156 Ga0501079_0512172 3300049741 Bacteria 943
157 Ga0501081_0037823 3300049743 Bacteria 3294
158 Ga0501045_0011526 3300049824 Bacteria 6209
159 nmdc:mga05p37_2064_c1 3300050507 Bacteria 19566
160 nmdc:mga05p37_233152_c1 3300050507 Bacteria 2217
161 nmdc:mga05p37_362656_c1 3300050507 Bacteria 1703
162 nmdc:mga05p37_662382_c1 3300050507 Bacteria 1167
163 nmdc:mga09592_303474_c1 3300050508 Bacteria 1384
164 nmdc:mga09592_403919_c1 3300050508 Bacteria 1181
165 nmdc:mga0qj67_63800_c1 3300050509 Bacteria 2929
166 nmdc:mga06r32_151874_c1 3300050510 Bacteria 2295
167 nmdc:mga08y16_459134_c1 3300050511 Bacteria 1298
168 nmdc:mga0n895_26866_c1 3300050512 Bacteria 5460
169 nmdc:mga0n895_274959_c1 3300050512 Unclassified 1708
170 nmdc:mga0n895_36024_c1 3300050512 Bacteria 4775
171 nmdc:mga0n895_580183_c1 3300050512 Bacteria 1125
172 nmdc:mga0n895_682535_c1 3300050512 Bacteria 1024
173 nmdc:mga0rr50_222741_c1 3300050513 Bacteria 1558
174 nmdc:mga0rr50_275408_c1 3300050513 Bacteria 1403
175 nmdc:mga0a205_425241_c1 3300050515 Bacteria 1190
176 Ga0495601_0196006 3300053077 Bacteria 1320
177 Ga0495595_0137222 3300053084 Bacteria 1198
178 Ga0495595_0217867 3300053084 Bacteria 952
179 Ga0495619_0028029 3300053085 Bacteria 3631
180 Ga0495619_0178040 3300053085 Bacteria 1471
181 Ga0501084_0552302 3300054114 Unclassified 973
182 Ga0501082_0312882 3300060353 Bacteria 1368
183 Ga0530510_0004114 3300061734 Bacteria 10043
184 Ga0114129_10356077
185 Ga0065712_10068390
186 Ga0065715_10005873
187 Ga0065715_10007735
188 Ga0065707_10310698
189 Ga0070670_100038164
190 Ga0070680_100224652
191 Ga0070682_100219640
192 Ga0070660_100030688
193 Ga0070688_100178858
194 Ga0070659_100139708
195 Ga0070709_10202255
196 Ga0070714_100176881
197 Ga0070713_100111984
198 Ga0070713_100308753
199 Ga0070710_10141076
200 Ga0070681_10412692
201 Ga0070706_100259628
202 Ga0070679_100331347
203 Ga0070684_100774846
204 Ga0070697_100031284
205 Ga0070697_100092587
206 Ga0070672_100198987
207 Ga0070696_100121596
208 Ga0070664_100316141
209 Ga0070664_100336982
210 Ga0068857_100030881
211 Ga0068859_100129629
212 Ga0068864_100435730
213 Ga0068864_100878267
214 Ga0068860_100011730
215 Ga0068860_100072977
216 Ga0081455_10116680
217 Ga0070717_10341220
218 Ga0070712_100014948
219 Ga0070712_100027914
220 Ga0075428_100220214
221 Ga0075430_100098024
222 Ga0075431_100124080
223 Ga0075434_100137235
224 Ga0075429_100253422
225 Ga0075436_100227957
226 Ga0097620_100129616
227 Ga0075435_100154329
228 Ga0099794_10161797
229 Ga0105240_10118865
230 Ga0111539_10457463
231 Ga0114129_10003968
232 Ga0114129_10023168
233 Ga0114129_10025249
234 Ga0114129_10048691
235 Ga0114129_10246496
236 Ga0105242_10158264
237 Ga0105248_10221924
238 Ga0105248_10449827
239 Ga0105239_10207163
240 Ga0157369_10089437
241 Ga0157374_10185698
242 Ga0163162_10226738
243 Ga0163162_10881199
244 Ga0157375_10261084
245 Ga0157380_10011629
246 Ga0157380_10786917
247 Ga0206351_10483904
248 Ga0206353_10591682
249 Ga0213871_10016705
250 Ga0207699_10350264
251 Ga0207707_10062053
252 Ga0207695_10015933
253 Ga0207693_10018554
254 Ga0207693_10030949
255 Ga0207663_10022005
256 Ga0207660_10354716
257 Ga0207657_10112582
258 Ga0207652_10481927
259 Ga0207700_10145818
260 Ga0207664_10247913
261 Ga0207690_10190348
262 Ga0207686_10344265
263 Ga0207709_10322181
264 Ga0207665_10192873
265 Ga0207691_10228984
266 Ga0207661_10075484
267 Ga0207651_10061485
268 Ga0207676_10399282
269 Ga0207674_10093256
270 Ga0207675_100756143
271 Ga0268265_10010342
272 Ga0268264_10006603
273 Ga0268264_10021180
274 Ga0265338_10047141
275 Ga0265340_10027103
276 Ga0307410_10230521
277 Ga0307406_10237888
278 Ga0307406_10419332
279 Ga0307407_10197378
280 Ga0307412_10281337
281 Ga0373926_0033348
282 Ga0373934_0000316
283 Ga0373945_0072127
284 Ga0373956_0000827
285 Ga0373957_0001241
286 Ga0373955_0016476
287 Ga0373955_0185684
288 Ga0373924_0081184
289 Ga0373931_0353722
290 Ga0373927_0007735
291 Ga0373933_0001497
292 Ga0373937_0000180
293 Ga0373937_0245749
294 Ga0373937_0422260
295 Ga0373925_0149529
296 Ga0436360_0456331
297 Ga0451577_0000621
298 Ga0451577_0077677
299 Ga0453683_0086050
300 Ga0453684_0014204
301 Ga0451576_0000181
302 Ga0495629_0009162
303 Ga0495651_0288095
304 Ga0495580_0008738
305 Ga0495582_0024082
306 Ga0495639_0107248
307 Ga0495594_0001575
308 Ga0495628_0038608
309 Ga0495628_0158971
310 Ga0495628_0471474
311 Ga0495642_0139045
312 Ga0495665_0149167
313 Ga0495586_0108747
314 Ga0495587_0219901
315 Ga0495645_0002296
316 Ga0495622_0125212
317 Ga0495599_0012831
318 Ga0495613_0075100
319 Ga0495600_0167509
320 Ga0495581_0019260
321 Ga0495674_0471232
322 Ga0495684_0055559
323 Ga0495684_0336326
324 Ga0495602_0158523
325 Ga0496104_0085049
326 Ga0496106_0122847
327 Ga0496109_0238112
328 Ga0496110_0044638
329 Ga0501036_0446725
330 Ga0501036_0662275
331 Ga0501039_0510790
332 Ga0501041_0077393
333 Ga0501041_0335376
334 Ga0501042_0102572
335 Ga0501073_0009551
336 Ga0501075_0153461
337 Ga0501076_0003410
338 Ga0501076_0108853
339 Ga0501079_0512172
340 Ga0501081_0037823
341 Ga0501045_0011526
342 nmdc:mga05p37_2064_c1
343 nmdc:mga05p37_233152_c1
344 nmdc:mga05p37_362656_c1
345 nmdc:mga05p37_662382_c1
346 nmdc:mga09592_303474_c1
347 nmdc:mga09592_403919_c1
348 nmdc:mga0qj67_63800_c1
349 nmdc:mga06r32_151874_c1
350 nmdc:mga08y16_459134_c1
351 nmdc:mga0n895_26866_c1
352 nmdc:mga0n895_274959_c1
353 nmdc:mga0n895_36024_c1
354 nmdc:mga0n895_580183_c1
355 nmdc:mga0n895_682535_c1
356 nmdc:mga0rr50_222741_c1
357 nmdc:mga0rr50_275408_c1
358 nmdc:mga0a205_425241_c1
359 Ga0495601_0196006
360 Ga0495595_0137222
361 Ga0495595_0217867
362 Ga0495619_0028029
363 Ga0495619_0178040
364 Ga0501084_0552302
365 Ga0501082_0312882
366 Ga0530510_0004114

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00535

Glycos_transf_2

Glycosyl transferase family 2

43

208

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
5mm0-assembly1.cif.gz_A dolichyl phosphate mannose synthase in complex with gdp-mannose and mn2+ (donor complex) 0.7954 5 240
5mm1-assembly1.cif.gz_A dolichyl phosphate mannose synthase in complex with gdp and dolichyl phosphate mannose 0.7948 6 238
7msp-assembly2.cif.gz_B suns glycosin s-glycosyltransferase 0.7875 5 118
7msn-assembly1.cif.gz_B suns glycosin s-glycosyltransferase 0.7868 5 118
7msn-assembly1.cif.gz_A suns glycosin s-glycosyltransferase 0.7787 5 118
ID Description Score Start End Superfamily
af_Q58619_2_238_3.90.550.10 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.8864 7 230 3.90.550.10
af_O53493_586_855_3.90.550.10 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.8493 5 244 3.90.550.10
af_A4ICW5_2_228_3.90.550.10 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.8334 6 222 3.90.550.10
af_K7MVE2_46_307_3.90.550.10 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.8317 4 217 3.90.550.10
af_P40350_49_327_3.90.550.10 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.8315 5 238 3.90.550.10
ID Description Score Start End GO Terms
AF-A0A2E5G6E6-F1-model_v4 Glycosyl transferase family 2 0.9675 1 247 GO:0016757
AF-A0A6A0IMX2-F1-model_v4 Glycosyltransferase family 2 protein 0.9672 1 247 GO:0016740
AF-A0A2J0KR74-F1-model_v4 D,D-heptose 1,7-bisphosphate phosphatase 0.9666 5 247 GO:0005737
GO:0005975
GO:0016791
AF-A0A1V5YLC6-F1-model_v4 Undecaprenyl-phosphate mannosyltransferase (EC 2.4.1.54) 0.966 5 246 GO:0047267
AF-A0A6N8JIB5-F1-model_v4 Glycosyltransferase 0.9649 1 246 GO:0016740

Map