F280512

General Info

Members Datasets Scaffolds Average Seq Length
183 119 183 635

Family's Representative Sequence

Representative Sequence 3300005536|Ga0070697_100000176|Ga0070697_10000017642
Length 710
Sequence MKNGLALEEGDRNGVPFRSNEEQSLPPLQGSKTRSTRSPSLRSGLLAAARLASWLKATPDVAYPNTPMKDKSLRVSLVLALMAVIYIAVGGQQTQTQSAPSAERLREHITYLASDKLEGRRTGSSGANLAAEYIAREFSRYGLRRSIGRDLPGMSILEADSPRRYMQEFPYVAGVQLGKSNRLSFSAADSSEIDVQILEDWMPLGFSANGRIEKAAGVFVGFGITAAELKHDDYSGVDVAGKIAIAFLGTPDGDNPHGQFARYEEPRWKAIAAKNAGAKALILISQQEQFTDERLSQLRYDNSAGDAGLPVVIVSSQTLLPRLDGANFADTLAPLKKGVVPQVNVKALITLSTDIVRKEVSAWNVAGILDGSDPTLKNETIIIGAHYDHLGLGGAGSLAPREGEIHHGADDNASGTAGVLELARLFAEQRPRPRRTIVFIAFSGEEEGLLGSNYYVNHPIVPLANTVAMINMDMIGRLKDKSLIVGGVGTAQEWRSMVEAQNLLESTTVNSSTRAFPMVVASNGRPIVTSDSAKMFSLTLNEDGFGPSDHSSFYAKQIPVLFFWTGTHADYHKPSDTAEKINYGGEVGILKLVARLVNSINANDKRPAYTVAKTEATGRSTGFRVSLGTIPNYAERNDGVLLDGVRDDSPAAKAGLKAGDKLVKLAGRDLRNVYDYTYALGEMKAGQEYEVEVVRGGERLKFKITPAARK

Samples

Sample ID Description Type Environment
1 3300002074 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S1 Metagenome Rhizosphere
2 3300002239 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2 Metagenome Rhizosphere
3 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
4 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
5 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
9 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
10 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
11 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
12 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
13 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
14 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
15 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
16 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
17 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
18 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
19 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
20 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
21 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
22 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
23 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
24 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
25 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
26 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
27 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
28 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
29 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
30 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
31 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
32 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
33 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
34 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
35 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
36 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
37 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
38 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
39 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
40 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
41 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
42 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
43 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
44 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
45 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
46 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
47 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
48 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
49 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
50 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
51 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
52 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
53 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
54 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
55 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
56 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
57 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
58 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
59 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
60 3300025223 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
87 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
88 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
89 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
90 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
91 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
92 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
93 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
94 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
95 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
96 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
97 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
98 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
99 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
100 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
101 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
102 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
103 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
104 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
105 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
106 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
107 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
108 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
109 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
110 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
111 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
112 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
113 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
114 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
115 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
116 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
117 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
118 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
119 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.55
Nodule 0
Rhizoplane 1.64
Rhizosphere 95.08
Stem 0
Stem Tuber 0
Unclassified 2.73

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24748J21848_1000018 3300002074 Bacteria 129847
2 JGI24034J26672_10000001 3300002239 Bacteria 1118280
3 Ga0065704_10005525 3300005289 Bacteria 4656
4 Ga0065707_10109455 3300005295 Bacteria 2468
5 Ga0070690_100001562 3300005330 Bacteria 12009
6 Ga0070690_100004681 3300005330 Bacteria 7625
7 Ga0070670_100000826 3300005331 Bacteria 24179
8 Ga0070680_100004028 3300005336 Bacteria 10996
9 Ga0070682_100000051 3300005337 Bacteria 123476
10 Ga0070689_100023893 3300005340 Bacteria 4582
11 Ga0070687_100016045 3300005343 Bacteria 3404
12 Ga0070669_100002222 3300005353 Bacteria 14049
13 Ga0070669_100006636 3300005353 Bacteria 8334
14 Ga0070675_100086190 3300005354 Unclassified 2625
15 Ga0070671_100000822 3300005355 Bacteria 22486
16 Ga0070703_10000014 3300005406 Bacteria 89131
17 Ga0070700_100020737 3300005441 Bacteria 3813
18 Ga0070708_100003169 3300005445 Bacteria 12826
19 Ga0070662_100016064 3300005457 Bacteria 5022
20 Ga0070681_10000523 3300005458 Bacteria 31450
21 Ga0070681_10001765 3300005458 Bacteria 19390
22 Ga0070706_100020524 3300005467 Bacteria 6089
23 Ga0070706_100021863 3300005467 Bacteria 5891
24 Ga0070706_100022909 3300005467 Bacteria 5751
25 Ga0070706_100070957 3300005467 Bacteria 3221
26 Ga0070707_100000252 3300005468 Bacteria 53706
27 Ga0070707_100003332 3300005468 Bacteria 15173
28 Ga0070707_100032866 3300005468 Bacteria 4943
29 Ga0070707_100108547 3300005468 Bacteria 2692
30 Ga0070698_100000699 3300005471 Bacteria 35881
31 Ga0070698_100008698 3300005471 Bacteria 10936
32 Ga0070699_100023454 3300005518 Bacteria 5315
33 Ga0070679_100001109 3300005530 Bacteria 23549
34 Ga0070679_100009165 3300005530 Bacteria 9344
35 Ga0070697_100000176 3300005536 Bacteria 52306
36 Ga0070697_100003041 3300005536 Bacteria 12878
37 Ga0070697_100020978 3300005536 Bacteria 5172
38 Ga0070697_100041248 3300005536 Unclassified 3734
39 Ga0070686_100002844 3300005544 Bacteria 9535
40 Ga0070686_100008146 3300005544 Bacteria 5863
41 Ga0070696_100028944 3300005546 Unclassified 3782
42 Ga0070704_100016440 3300005549 Unclassified 4675
43 Ga0070704_100033139 3300005549 Bacteria 3491
44 Ga0070664_100001715 3300005564 Bacteria 17549
45 Ga0068856_100022591 3300005614 Bacteria 6115
46 Ga0070702_100036542 3300005615 Bacteria 2722
47 Ga0068859_100008116 3300005617 Bacteria 10648
48 Ga0068859_100072728 3300005617 Unclassified 3475
49 Ga0068859_100077876 3300005617 Bacteria 3356
50 Ga0068859_100157563 3300005617 Bacteria 2348
51 Ga0068864_100017547 3300005618 Bacteria 5967
52 Ga0068864_100044378 3300005618 Unclassified 3810
53 Ga0068861_100005663 3300005719 Bacteria 8471
54 Ga0068858_100000089 3300005842 Bacteria 94932
55 Ga0068858_100106854 3300005842 Bacteria 2612
56 Ga0068860_100140130 3300005843 Bacteria 2324
57 Ga0068862_100005732 3300005844 Bacteria 10366
58 Ga0068862_100030684 3300005844 Bacteria 4532
59 Ga0081455_10008078 3300005937 Bacteria 10988
60 Ga0081455_10015033 3300005937 Bacteria 7539
61 Ga0081539_10001057 3300005985 Bacteria 50359
62 Ga0081539_10002024 3300005985 Bacteria 30581
63 Ga0081539_10002351 3300005985 Bacteria 27174
64 Ga0070715_10000016 3300006163 Bacteria 134692
65 Ga0070716_100000001 3300006173 Bacteria 400668
66 Ga0075428_100004647 3300006844 Bacteria 15196
67 Ga0075428_100107907 3300006844 Bacteria 3034
68 Ga0075431_100176191 3300006847 Unclassified 2196
69 Ga0075433_10038684 3300006852 Bacteria 4121
70 Ga0075434_100065022 3300006871 Bacteria 3632
71 Ga0097620_100008116 3300006931 Bacteria 10648
72 Ga0097620_100072729 3300006931 Unclassified 3475
73 Ga0097620_100077881 3300006931 Bacteria 3356
74 Ga0097620_100157571 3300006931 Bacteria 2348
75 Ga0111539_10081044 3300009094 Bacteria 3817
76 Ga0111539_10143492 3300009094 Bacteria 2795
77 Ga0111539_10171594 3300009094 Unclassified 2534
78 Ga0111539_10202997 3300009094 Bacteria 2311
79 Ga0105247_10000002 3300009101 Bacteria 724587
80 Ga0114129_10011843 3300009147 Bacteria 12405
81 Ga0114129_10048697 3300009147 Bacteria 5955
82 Ga0114129_10182430 3300009147 Bacteria 2855
83 Ga0105243_10000037 3300009148 Bacteria 175237
84 Ga0105243_10000095 3300009148 Bacteria 100826
85 Ga0105242_10000039 3300009176 Bacteria 88325
86 Ga0105242_10056503 3300009176 Bacteria 3212
87 Ga0105248_10031507 3300009177 Bacteria 5927
88 Ga0105248_10105624 3300009177 Bacteria 3175
89 Ga0105248_10262695 3300009177 Bacteria 1943
90 Ga0105237_10065494 3300009545 Bacteria 3630
91 Ga0105238_10101882 3300009551 Bacteria 2853
92 Ga0105249_10010555 3300009553 Bacteria 8117
93 Ga0105249_10065086 3300009553 Bacteria 3352
94 Ga0105249_10108149 3300009553 Bacteria 2625
95 Ga0157378_10000077 3300013297 Bacteria 89664
96 Ga0157378_10067131 3300013297 Bacteria 3213
97 Ga0157378_10103601 3300013297 Bacteria 2600
98 Ga0157378_10103646 3300013297 Unclassified 2600
99 Ga0163162_10004174 3300013306 Bacteria 13880
100 Ga0157372_10024822 3300013307 Bacteria 6515
101 Ga0157372_10157275 3300013307 Bacteria 2626
102 Ga0157380_10017360 3300014326 Bacteria 5325
103 Ga0157380_10023793 3300014326 Bacteria 4626
104 Ga0157380_10074076 3300014326 Unclassified 2763
105 Ga0213876_10000047 3300021384 Bacteria 146737
106 Ga0213876_10000133 3300021384 Bacteria 81090
107 Ga0207672_1000044 3300025223 Bacteria 16168
108 Ga0207653_10000307 3300025885 Bacteria 27669
109 Ga0207710_10000002 3300025900 Bacteria 1251998
110 Ga0207685_10000044 3300025905 Bacteria 50458
111 Ga0207707_10000006 3300025912 Bacteria 374131
112 Ga0207660_10000971 3300025917 Bacteria 18966
113 Ga0207662_10016065 3300025918 Bacteria 4219
114 Ga0207652_10000216 3300025921 Bacteria 61049
115 Ga0207646_10000399 3300025922 Bacteria 58192
116 Ga0207646_10000764 3300025922 Bacteria 41634
117 Ga0207646_10054519 3300025922 Bacteria 3576
118 Ga0207646_10070222 3300025922 Bacteria 3128
119 Ga0207646_10093633 3300025922 Unclassified 2690
120 Ga0207681_10031983 3300025923 Bacteria 3441
121 Ga0207694_10005775 3300025924 Bacteria 9482
122 Ga0207650_10004349 3300025925 Bacteria 9679
123 Ga0207644_10001593 3300025931 Bacteria 14642
124 Ga0207706_10091557 3300025933 Bacteria 2673
125 Ga0207686_10000003 3300025934 Bacteria 376934
126 Ga0207709_10000017 3300025935 Bacteria 470753
127 Ga0207709_10000670 3300025935 Bacteria 27747
128 Ga0207665_10000016 3300025939 Bacteria 132853
129 Ga0207691_10085125 3300025940 Bacteria 2837
130 Ga0207711_10031891 3300025941 Bacteria 4452
131 Ga0207689_10006774 3300025942 Bacteria 10083
132 Ga0207689_10077061 3300025942 Unclassified 2741
133 Ga0207712_10006566 3300025961 Bacteria 7341
134 Ga0207712_10022142 3300025961 Unclassified 4182
135 Ga0207712_10028263 3300025961 Bacteria 3749
136 Ga0207703_10000394 3300026035 Bacteria 46894
137 Ga0207703_10045601 3300026035 Bacteria 3527
138 Ga0207708_10018404 3300026075 Bacteria 5260
139 Ga0207708_10031695 3300026075 Bacteria 4013
140 Ga0207702_10059712 3300026078 Bacteria 3248
141 Ga0207674_10000192 3300026116 Bacteria 75255
142 Ga0207675_100000853 3300026118 Bacteria 30381
143 Ga0207675_100054947 3300026118 Bacteria 3715
144 Ga0207675_100126967 3300026118 Bacteria 2416
145 Ga0207428_10006776 3300027907 Bacteria 10509
146 Ga0265322_10002093 3300028654 Bacteria 6258
147 Ga0265332_10003709 3300031238 Bacteria 7311
148 Ga0265327_10003700 3300031251 Bacteria 14260
149 Ga0307513_10092284 3300031456 Unclassified 3083
150 Ga0265314_10028905 3300031711 Bacteria 4126
151 Ga0307413_10001077 3300031824 Bacteria 9955
152 Ga0307410_10003630 3300031852 Bacteria 7781
153 Ga0307406_10010837 3300031901 Bacteria 5152
154 Ga0307412_10010719 3300031911 Bacteria 5286
155 Ga0307411_10011275 3300032005 Unclassified 4815
156 Ga0307415_100013194 3300032126 Unclassified 4815
157 Ga0373951_0001364 3300035091 Bacteria 6417
158 Ga0395900_0143670 3300037418 Unclassified 2442
159 Ga0436365_0510131 3300039437 Bacteria 75570
160 Ga0436365_0712066 3300039437 Bacteria 32363
161 Ga0439434_0014586 3300042435 Unclassified 2338
162 Ga0451577_0001846 3300042876 Bacteria 27006
163 Ga0453683_0001702 3300044673 Bacteria 18306
164 Ga0453684_0004528 3300044712 Bacteria 29161
165 Ga0451576_0023124 3300045051 Bacteria 6734
166 Ga0495632_0021166 3300046519 Bacteria 3507
167 Ga0495663_0000083 3300046525 Bacteria 43451
168 Ga0495598_0002612 3300046537 Bacteria 3729
169 Ga0495621_0000089 3300046539 Bacteria 18610
170 Ga0495672_0005341 3300047320 Bacteria 10221
171 Ga0496102_0075191 3300048905 Bacteria 3105
172 Ga0496106_0007346 3300048909 Bacteria 8144
173 Ga0496109_0000074 3300048912 Bacteria 106163
174 Ga0501047_0046663 3300049581 Bacteria 4187
175 nmdc:mga05p37_149784_c1 3300050507 Bacteria 2855
176 nmdc:mga05p37_20534_c1 3300050507 Bacteria 7991
177 nmdc:mga05p37_25608_c1 3300050507 Bacteria 7176
178 nmdc:mga06r32_12315_c1 3300050510 Bacteria 7713
179 nmdc:mga0n895_10579_c1 3300050512 Bacteria 8164
180 nmdc:mga0a205_102477_c1 3300050515 Bacteria 2761
181 nmdc:mga0a205_16862_c1 3300050515 Bacteria 6837
182 nmdc:mga0a205_56323_c1 3300050515 Unclassified 3795
183 Ga0500577_0001513 3300053142 Bacteria 5925

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300026118 Ga0207675_100054947 Ga0207675_1000549472 501
2 3300005458 Ga0070681_10001765 Ga0070681_100017658 525
3 3300006844 Ga0075428_100004647 Ga0075428_10000464711 561
4 3300035091 Ga0373951_0001364 Ga0373951_0001364_4031_5791 562
5 3300009177 Ga0105248_10262695 Ga0105248_102626951 567
6 3300005441 Ga0070700_100020737 Ga0070700_1000207373 568
7 3300005842 Ga0068858_100106854 Ga0068858_1001068543 568
8 3300009176 Ga0105242_10056503 Ga0105242_100565032 568
9 3300009177 Ga0105248_10105624 Ga0105248_101056242 568
10 3300021384 Ga0213876_10000133 Ga0213876_100001335 568
11 3300025933 Ga0207706_10091557 Ga0207706_100915573 568
12 3300026035 Ga0207703_10045601 Ga0207703_100456014 568
13 3300026075 Ga0207708_10031695 Ga0207708_100316952 568
14 3300039437 Ga0436365_0510131 Ga0436365_0510131_68274_70175 568
15 3300009551 Ga0105238_10101882 Ga0105238_101018822 569
16 3300025924 Ga0207694_10005775 Ga0207694_100057758 569
17 3300042876 Ga0451577_0001846 Ga0451577_0001846_23388_25208 570
18 3300044712 Ga0453684_0004528 Ga0453684_0004528_22275_24095 570
19 3300046519 Ga0495632_0021166 Ga0495632_0021166_1351_3294 574
20 3300031238 Ga0265332_10003709 Ga0265332_100037094 575
21 3300031711 Ga0265314_10028905 Ga0265314_100289052 575
22 3300031251 Ga0265327_10003700 Ga0265327_100037002 576
23 3300053142 Ga0500577_0001513 Ga0500577_0001513_1482_3287 576
24 3300028654 Ga0265322_10002093 Ga0265322_100020938 577
25 3300044673 Ga0453683_0001702 Ga0453683_0001702_5073_6884 579
26 3300050515 nmdc:mga0a205_16862_c1 nmdc:mga0a205_16862_c1_635_2488 579
27 3300005843 Ga0068860_100140130 Ga0068860_1001401302 580
28 3300013306 Ga0163162_10004174 Ga0163162_1000417410 580
29 3300025961 Ga0207712_10028263 Ga0207712_100282633 580
30 3300049581 Ga0501047_0046663 Ga0501047_0046663_1966_3849 581
31 3300006844 Ga0075428_100107907 Ga0075428_1001079072 582
32 3300009094 Ga0111539_10143492 Ga0111539_101434921 582
33 3300050515 nmdc:mga0a205_56323_c1 nmdc:mga0a205_56323_c1_1043_2890 582
34 3300005614 Ga0068856_100022591 Ga0068856_1000225912 586
35 3300009545 Ga0105237_10065494 Ga0105237_100654942 586
36 3300037418 Ga0395900_0143670 Ga0395900_0143670_339_2378 586
37 3300026078 Ga0207702_10059712 Ga0207702_100597122 587
38 3300048905 Ga0496102_0075191 Ga0496102_0075191_966_2870 587
39 3300013307 Ga0157372_10024822 Ga0157372_100248223 588
40 3300005289 Ga0065704_10005525 Ga0065704_100055251 590
41 3300031824 Ga0307413_10001077 Ga0307413_100010776 590
42 3300031852 Ga0307410_10003630 Ga0307410_100036306 590
43 3300031901 Ga0307406_10010837 Ga0307406_100108371 590
44 3300031911 Ga0307412_10010719 Ga0307412_100107192 590
45 3300032005 Ga0307411_10011275 Ga0307411_100112754 590
46 3300032126 Ga0307415_100013194 Ga0307415_1000131941 590
47 3300005468 Ga0070707_100003332 Ga0070707_1000033329 591
48 3300005985 Ga0081539_10002024 Ga0081539_1000202418 591
49 3300006163 Ga0070715_10000016 Ga0070715_1000001674 591
50 3300025905 Ga0207685_10000044 Ga0207685_100000446 591
51 3300025922 Ga0207646_10000764 Ga0207646_1000076430 591
52 3300005617 Ga0068859_100077876 Ga0068859_1000778762 592
53 3300006931 Ga0097620_100077881 Ga0097620_1000778812 592
54 3300009553 Ga0105249_10065086 Ga0105249_100650862 592
55 3300025940 Ga0207691_10085125 Ga0207691_100851251 592
56 3300025941 Ga0207711_10031891 Ga0207711_100318914 592
57 3300025961 Ga0207712_10006566 Ga0207712_100065665 592
58 3300005937 Ga0081455_10008078 Ga0081455_100080783 593
59 3300006847 Ga0075431_100176191 Ga0075431_1001761911 593
60 3300009094 Ga0111539_10081044 Ga0111539_100810441 593
61 3300027907 Ga0207428_10006776 Ga0207428_100067764 593
62 3300048912 Ga0496109_0000074 Ga0496109_0000074_100895_102727 593
63 3300050507 nmdc:mga05p37_25608_c1 nmdc:mga05p37_25608_c1_3287_5131 593
64 3300050510 nmdc:mga06r32_12315_c1 nmdc:mga06r32_12315_c1_5793_7637 593
65 3300005471 Ga0070698_100008698 Ga0070698_1000086983 595
66 3300005549 Ga0070704_100033139 Ga0070704_1000331393 595
67 3300005336 Ga0070680_100004028 Ga0070680_1000040283 596
68 3300005458 Ga0070681_10000523 Ga0070681_1000052310 596
69 3300005530 Ga0070679_100001109 Ga0070679_10000110921 596
70 3300025912 Ga0207707_10000006 Ga0207707_10000006159 596
71 3300025917 Ga0207660_10000971 Ga0207660_1000097117 596
72 3300025921 Ga0207652_10000216 Ga0207652_1000021621 596
73 3300005937 Ga0081455_10015033 Ga0081455_100150334 598
74 3300005617 Ga0068859_100008116 Ga0068859_10000811610 599
75 3300006931 Ga0097620_100008116 Ga0097620_10000811610 599
76 3300042435 Ga0439434_0014586 Ga0439434_0014586_173_2056 601
77 3300005985 Ga0081539_10002351 Ga0081539_1000235126 602
78 3300005467 Ga0070706_100020524 Ga0070706_1000205243 603
79 3300005536 Ga0070697_100003041 Ga0070697_1000030414 603
80 3300006852 Ga0075433_10038684 Ga0075433_100386841 603
81 3300009094 Ga0111539_10202997 Ga0111539_102029972 603
82 3300009147 Ga0114129_10011843 Ga0114129_100118438 603
83 3300009147 Ga0114129_10182430 Ga0114129_101824301 603
84 3300050507 nmdc:mga05p37_149784_c1 nmdc:mga05p37_149784_c1_890_2776 603
85 3300050507 nmdc:mga05p37_20534_c1 nmdc:mga05p37_20534_c1_2421_4394 603
86 3300050515 nmdc:mga0a205_102477_c1 nmdc:mga0a205_102477_c1_857_2743 603
87 3300005530 Ga0070679_100009165 Ga0070679_1000091652 606
88 3300005536 Ga0070697_100000176 Ga0070697_10000017642 606
89 3300005564 Ga0070664_100001715 Ga0070664_1000017156 606
90 3300013307 Ga0157372_10157275 Ga0157372_101572752 606
91 3300026116 Ga0207674_10000192 Ga0207674_1000019247 606
92 3300005985 Ga0081539_10001057 Ga0081539_1000105736 607
93 3300009148 Ga0105243_10000037 Ga0105243_1000003799 607
94 3300009176 Ga0105242_10000039 Ga0105242_1000003953 607
95 3300025934 Ga0207686_10000003 Ga0207686_10000003286 607
96 3300025935 Ga0207709_10000017 Ga0207709_10000017345 607
97 3300005354 Ga0070675_100086190 Ga0070675_1000861902 608
98 3300005618 Ga0068864_100044378 Ga0068864_1000443782 608
99 3300025961 Ga0207712_10022142 Ga0207712_100221422 608
100 3300026118 Ga0207675_100126967 Ga0207675_1001269671 608
101 3300005467 Ga0070706_100070957 Ga0070706_1000709572 609
102 3300005468 Ga0070707_100032866 Ga0070707_1000328663 609
103 3300006173 Ga0070716_100000001 Ga0070716_10000000126 609
104 3300025939 Ga0207665_10000016 Ga0207665_1000001623 609
105 3300005295 Ga0065707_10109455 Ga0065707_101094551 610
106 3300005719 Ga0068861_100005663 Ga0068861_1000056635 610
107 3300005844 Ga0068862_100005732 Ga0068862_1000057325 610
108 3300009094 Ga0111539_10171594 Ga0111539_101715942 610
109 3300009553 Ga0105249_10010555 Ga0105249_100105555 610
110 3300014326 Ga0157380_10017360 Ga0157380_100173604 610
111 3300025923 Ga0207681_10031983 Ga0207681_100319832 610
112 3300005353 Ga0070669_100006636 Ga0070669_1000066365 611
113 3300006871 Ga0075434_100065022 Ga0075434_1000650223 611
114 3300013297 Ga0157378_10067131 Ga0157378_100671312 611
115 3300013297 Ga0157378_10103601 Ga0157378_101036012 611
116 3300014326 Ga0157380_10023793 Ga0157380_100237932 611
117 3300050512 nmdc:mga0n895_10579_c1 nmdc:mga0n895_10579_c1_1246_3129 611
118 3300005331 Ga0070670_100000826 Ga0070670_10000082617 612
119 3300005340 Ga0070689_100023893 Ga0070689_1000238934 612
120 3300009147 Ga0114129_10048697 Ga0114129_100486973 612
121 3300025925 Ga0207650_10004349 Ga0207650_100043493 612
122 3300025942 Ga0207689_10077061 Ga0207689_100770612 613
123 3300005330 Ga0070690_100001562 Ga0070690_1000015624 614
124 3300005330 Ga0070690_100004681 Ga0070690_1000046814 614
125 3300005343 Ga0070687_100016045 Ga0070687_1000160452 614
126 3300005353 Ga0070669_100002222 Ga0070669_1000022224 614
127 3300005457 Ga0070662_100016064 Ga0070662_1000160642 614
128 3300005544 Ga0070686_100002844 Ga0070686_1000028442 614
129 3300005544 Ga0070686_100008146 Ga0070686_1000081461 614
130 3300005617 Ga0068859_100072728 Ga0068859_1000727282 614
131 3300005844 Ga0068862_100030684 Ga0068862_1000306842 614
132 3300006931 Ga0097620_100072729 Ga0097620_1000727292 614
133 3300014326 Ga0157380_10074076 Ga0157380_100740762 614
134 3300025918 Ga0207662_10016065 Ga0207662_100160654 614
135 3300005337 Ga0070682_100000051 Ga0070682_10000005127 615
136 3300009148 Ga0105243_10000095 Ga0105243_1000009521 615
137 3300009553 Ga0105249_10108149 Ga0105249_101081491 615
138 3300013297 Ga0157378_10000077 Ga0157378_1000007755 615
139 3300021384 Ga0213876_10000047 Ga0213876_10000047115 615
140 3300025922 Ga0207646_10070222 Ga0207646_100702222 615
141 3300025935 Ga0207709_10000670 Ga0207709_1000067018 615
142 3300039437 Ga0436365_0712066 Ga0436365_0712066_5388_7466 615
143 3300048909 Ga0496106_0007346 Ga0496106_0007346_2381_4264 615
144 3300005355 Ga0070671_100000822 Ga0070671_1000008227 616
145 3300005445 Ga0070708_100003169 Ga0070708_10000316910 616
146 3300005467 Ga0070706_100021863 Ga0070706_1000218632 616
147 3300005468 Ga0070707_100108547 Ga0070707_1001085472 616
148 3300005518 Ga0070699_100023454 Ga0070699_1000234542 616
149 3300005536 Ga0070697_100041248 Ga0070697_1000412482 616
150 3300025922 Ga0207646_10054519 Ga0207646_100545192 616
151 3300025922 Ga0207646_10093633 Ga0207646_100936332 616
152 3300031456 Ga0307513_10092284 Ga0307513_100922842 616
153 3300046525 Ga0495663_0000083 Ga0495663_0000083_12674_14665 616
154 3300046537 Ga0495598_0002612 Ga0495598_0002612_1281_3272 616
155 3300046539 Ga0495621_0000089 Ga0495621_0000089_341_2332 616
156 3300005468 Ga0070707_100000252 Ga0070707_10000025240 617
157 3300005549 Ga0070704_100016440 Ga0070704_1000164401 617
158 3300025922 Ga0207646_10000399 Ga0207646_1000039933 617
159 3300026118 Ga0207675_100000853 Ga0207675_10000085328 617
160 3300045051 Ga0451576_0023124 Ga0451576_0023124_3244_5133 618
161 3300005536 Ga0070697_100020978 Ga0070697_1000209782 619
162 3300005615 Ga0070702_100036542 Ga0070702_1000365422 619
163 3300005617 Ga0068859_100157563 Ga0068859_1001575631 619
164 3300006931 Ga0097620_100157571 Ga0097620_1001575711 619
165 3300025931 Ga0207644_10001593 Ga0207644_1000159312 619
166 3300025942 Ga0207689_10006774 Ga0207689_100067742 619
167 3300005471 Ga0070698_100000699 Ga0070698_10000069917 620
168 3300005467 Ga0070706_100022909 Ga0070706_1000229093 621
169 3300047320 Ga0495672_0005341 Ga0495672_0005341_1173_3272 621
170 3300005546 Ga0070696_100028944 Ga0070696_1000289442 622
171 3300005618 Ga0068864_100017547 Ga0068864_1000175477 623
172 3300009177 Ga0105248_10031507 Ga0105248_100315073 623
173 3300013297 Ga0157378_10103646 Ga0157378_101036461 623
174 3300005406 Ga0070703_10000014 Ga0070703_1000001460 624
175 3300025885 Ga0207653_10000307 Ga0207653_100003077 624
176 3300026075 Ga0207708_10018404 Ga0207708_100184042 624
177 3300002074 JGI24748J21848_1000018 JGI24748J21848_100001866 635
178 3300002239 JGI24034J26672_10000001 JGI24034J26672_10000001465 635
179 3300005842 Ga0068858_100000089 Ga0068858_1000000895 635
180 3300009101 Ga0105247_10000002 Ga0105247_10000002523 635
181 3300025223 Ga0207672_1000044 Ga0207672_10000442 635
182 3300025900 Ga0207710_10000002 Ga0207710_10000002523 635
183 3300026035 Ga0207703_10000394 Ga0207703_100003942 635

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13180

PDZ_2

PDZ domain

626

705

0.94

PF04389

Peptidase_M28

Peptidase family M28

364

597

0.82

PF02225

PA

PA domain

209

320

0.75

PF01546

Peptidase_M20

Peptidase family M20/M25/M40

382

597

0.7

Structural Annotation

Top 5 Hits

ID Description Score Start End
5jd8-assembly1.cif.gz_A crystal structure of the serine endoprotease from yersinia pestis 0.9204 549 635
8k2y-assembly1.cif.gz_C crystal structure of mucd 0.9176 549 633
5zvj-assembly1.cif.gz_A crystal structure of htra1 from mycobacterium tuberculosis 0.9136 549 635
4rqy-assembly2.cif.gz_B re-refined structure of 1te0 - structural analysis of degs, a stress sensor of the bacterial periplasm 0.9109 549 633
7w4u-assembly1.cif.gz_A structure of the m. tuberculosis htra s407a mutant at room-temperature 0.9069 549 635
ID Description Score Start End Superfamily
af_A4HUC6_570_668_2.30.42.10 Mainly Beta;Roll;Pdz3 Domain;PDZ domain 0.9343 564 630 2.30.42.10
af_A0A1D6E958_384_486_2.30.42.10 Mainly Beta;Roll;Pdz3 Domain;PDZ domain 0.9285 562 633 2.30.42.10
af_Q58381_199_269_2.30.42.10 Mainly Beta;Roll;Pdz3 Domain;PDZ domain 0.921 575 633 2.30.42.10
3pv2A03 Mainly Beta;Roll;Pdz3 Domain;PDZ domain 0.9184 564 629 2.30.42.10
af_Q4D678_1000_1086_2.30.42.10 Mainly Beta;Roll;Pdz3 Domain;PDZ domain 0.9165 563 635 2.30.42.10
ID Description Score Start End GO Terms
AF-A0A3C0X1R0-F1-model_v4 PDZ domain-containing protein 0.9736 549 633 GO:0004252
GO:0006508
GO:0016020
AF-A0A538QHG3-F1-model_v4 PDZ domain-containing protein 0.9699 563 633 GO:0030313
GO:0042597
AF-A0A832M8Y9-F1-model_v4 PDZ domain-containing protein 0.9638 563 632 GO:0004252
GO:0006508
AF-A0A6J7P6N4-F1-model_v4 Unannotated protein 0.9613 549 632 GO:0004252
GO:0006508
GO:0016020
AF-A0A3D3BMP4-F1-model_v4 PDZ domain-containing protein 0.961 549 633 GO:0004252
GO:0006508
GO:0016020

Feature Viewer

pLDDT pTM Quality
81.15 0.81 High
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Predicted Structure (AlphaFold2)

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