F279807

General Info

Members Datasets Scaffolds Average Seq Length
182 142 364 395

Family's Representative Sequence

Representative Sequence 3300048929|Ga0496126_0025145|Ga0496126_0025145_2448_3791
Length 433
Sequence MVSDGTQCRPQNGLAALACRSLEARVAQREEDIMHAKLRSAFLAAALSAAASPSFANVITDWDEKAVAVVTPMSSLGGTSPYLAVRLMGMVHAAMFDAVNSIEQRYRPYLVQLPADSATATIDAKTADEMKAALAAYLAPLPDGAARSDGIALGRTVAAKVIEARANDGCDAPDAYRPRTTSGVYVPTAITLSSMWPDMKPFVMAKGSQFRPKPPIALDSKEWATDFNELKEYGGKNSAKRTAQQTETALFWTSPLLAYQPLMRQLVSAKQMGVLDSARFMALEAFALNDAIIAVLDAKYHYNFWRPITAIRNGDIDGNPATDTAATWQPVANTPMHPEYPCSHCIQSGSVAAVVKAVLGGVDIPEVALTSPATPGVTHRWTNLTAFTEEVANARIWAGFHYRFSTRVGTDMGLQIGEYVVRTVMQPVVTSSR

Samples

Sample ID Description Type Environment
1 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
2 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
3 3300003659 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
4 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
9 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
10 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
11 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
12 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
13 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
14 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
15 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
16 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
17 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
18 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
19 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
20 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
21 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
22 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
23 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
24 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
25 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
26 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
27 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
28 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
29 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
30 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
31 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
32 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
33 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
34 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
35 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
36 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
37 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
38 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
39 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
40 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
41 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
42 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
43 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
44 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
45 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
46 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
47 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
48 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
49 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
50 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
51 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
52 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
53 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
54 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
55 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
56 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
57 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
58 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300027512 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
84 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
86 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
87 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
88 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
89 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
90 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
91 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
92 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
93 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
94 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
95 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
96 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
97 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
98 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
99 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
100 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
101 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
102 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
103 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
104 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
105 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
106 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
107 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
108 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
109 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
110 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
111 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
112 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
113 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
114 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
115 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
116 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
117 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
118 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
119 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
120 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
121 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
122 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
123 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
124 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
125 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
126 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
127 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
128 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
129 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
130 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
131 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
132 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
133 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
134 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
135 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
136 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
137 3300055283 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere Metagenome Endosphere
138 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
139 2513237139 Bradyrhizobium ottawaense USDA 4 Isolate Nodule
140 2791355196 Bradyrhizobium sp. Y36 Isolate Nodule
141 2824696289 Bradyrhizobium sp. HAMBI 2127 Isolate Unclassified
142 2935959822 Bradyrhizobium sp. F1.4.3 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 97.8
Metatranscriptomes 0
Isolates 2.2

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.4
Nodule 1.65
Rhizoplane 9.89
Rhizosphere 81.32
Stem 0
Stem Tuber 0
Unclassified 7.14

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0496126_0025145 3300048929 Bacteria 5734
2 rootH1_10370242 3300003323 Bacteria 2206
3 JGI25404J52841_10017420 3300003659 Bacteria 1558
4 JGI25404J52841_10018234 3300003659 Unclassified 1521
5 Ga0065707_10006452 3300005295 Bacteria 4572
6 Ga0070683_100112325 3300005329 Bacteria 2571
7 Ga0070690_100038321 3300005330 Bacteria 3024
8 Ga0068868_100012184 3300005338 Bacteria 6281
9 Ga0070691_10006557 3300005341 Bacteria 5325
10 Ga0070691_10028101 3300005341 Bacteria 2626
11 Ga0070661_100046780 3300005344 Bacteria 3166
12 Ga0070669_100083046 3300005353 Bacteria 2389
13 Ga0070675_100052251 3300005354 Bacteria 3359
14 Ga0070671_100114558 3300005355 Bacteria 2266
15 Ga0070674_100006491 3300005356 Bacteria 6830
16 Ga0070674_100049827 3300005356 Bacteria 2881
17 Ga0070673_100006041 3300005364 Bacteria 7843
18 Ga0070673_100024259 3300005364 Bacteria 4444
19 Ga0070700_100008077 3300005441 Bacteria 5722
20 Ga0070694_100039124 3300005444 Bacteria 3155
21 Ga0070663_100107686 3300005455 Bacteria 2089
22 Ga0070678_100075529 3300005456 Bacteria 2535
23 Ga0070662_100034889 3300005457 Bacteria 3549
24 Ga0070681_10121107 3300005458 Bacteria 2551
25 Ga0070706_100115433 3300005467 Bacteria 2500
26 Ga0070679_100112341 3300005530 Bacteria 2710
27 Ga0070684_100110966 3300005535 Bacteria 2459
28 Ga0070697_100094774 3300005536 Bacteria 2474
29 Ga0070672_100009719 3300005543 Bacteria 6642
30 Ga0070686_100087888 3300005544 Bacteria 2073
31 Ga0070695_100015329 3300005545 Bacteria 4627
32 Ga0070665_100051896 3300005548 Unclassified 4113
33 Ga0068852_100094571 3300005616 Unclassified 2681
34 Ga0068852_100172333 3300005616 Bacteria 2029
35 Ga0068864_100045066 3300005618 Bacteria 3783
36 Ga0068866_10029623 3300005718 Bacteria 2620
37 Ga0068861_100176779 3300005719 Unclassified 1773
38 Ga0068858_100268234 3300005842 Bacteria 1624
39 Ga0068862_100180634 3300005844 Bacteria 1893
40 Ga0081455_10003890 3300005937 Bacteria 17005
41 Ga0081455_10031288 3300005937 Bacteria 4817
42 Ga0081540_1000280 3300005983 Bacteria 53060
43 Ga0081540_1006772 3300005983 Bacteria 8285
44 Ga0081540_1007655 3300005983 Bacteria 7660
45 Ga0081540_1018054 3300005983 Bacteria 4342
46 Ga0081540_1019417 3300005983 Bacteria 4130
47 Ga0081540_1020205 3300005983 Bacteria 4016
48 Ga0081540_1033384 3300005983 Bacteria 2796
49 Ga0075364_10098842 3300006051 Bacteria 1942
50 Ga0070715_10037449 3300006163 Bacteria 2007
51 Ga0070712_100004175 3300006175 Bacteria 8886
52 Ga0075431_100088890 3300006847 Bacteria 3189
53 Ga0075431_100209956 3300006847 Bacteria 1989
54 Ga0099795_10000852 3300007788 Bacteria 6086
55 Ga0099795_10006946 3300007788 Bacteria 3125
56 Ga0099795_10019354 3300007788 Bacteria 2202
57 Ga0111539_10016313 3300009094 Bacteria 9208
58 Ga0111539_10126921 3300009094 Bacteria 2988
59 Ga0111539_10540718 3300009094 Bacteria 1357
60 Ga0105245_10021243 3300009098 Bacteria 5691
61 Ga0105245_10044946 3300009098 Bacteria 3943
62 Ga0114129_10179752 3300009147 Bacteria 2880
63 Ga0105243_10015271 3300009148 Bacteria 5810
64 Ga0105242_10020576 3300009176 Bacteria 5176
65 Ga0105237_10160514 3300009545 Bacteria 2246
66 Ga0099796_10001399 3300010159 Bacteria 4829
67 Ga0099796_10012400 3300010159 Bacteria 2406
68 Ga0105239_10048363 3300010375 Bacteria 4664
69 Ga0105246_10013656 3300011119 Bacteria 5096
70 Ga0105246_10067801 3300011119 Bacteria 2501
71 Ga0163162_10186859 3300013306 Bacteria 2199
72 Ga0157375_10038394 3300013308 Unclassified 4598
73 Ga0157375_10203952 3300013308 Bacteria 2134
74 Ga0157375_10225242 3300013308 Bacteria 2034
75 Ga0163163_10135159 3300014325 Bacteria 2507
76 Ga0163163_10256509 3300014325 Bacteria 1799
77 Ga0157379_10007866 3300014968 Bacteria 9237
78 Ga0157379_10110472 3300014968 Bacteria 2469
79 Ga0157379_10110581 3300014968 Bacteria 2468
80 Ga0157376_10029858 3300014969 Unclassified 4345
81 Ga0163161_10179384 3300017792 Bacteria 1623
82 Ga0209455_1001649 3300025272 Bacteria 9692
83 Ga0207688_10015668 3300025901 Bacteria 4111
84 Ga0207685_10054038 3300025905 Bacteria 1562
85 Ga0207699_10004684 3300025906 Bacteria 6534
86 Ga0207699_10037283 3300025906 Unclassified 2778
87 Ga0207684_10036320 3300025910 Bacteria 4183
88 Ga0207707_10052997 3300025912 Bacteria 3531
89 Ga0207693_10007654 3300025915 Bacteria 8870
90 Ga0207681_10037279 3300025923 Bacteria 3213
91 Ga0207659_10117651 3300025926 Bacteria 2031
92 Ga0207687_10038130 3300025927 Bacteria 3283
93 Ga0207706_10053638 3300025933 Bacteria 3559
94 Ga0207686_10069206 3300025934 Bacteria 2264
95 Ga0207669_10093444 3300025937 Bacteria 1965
96 Ga0207669_10115643 3300025937 Bacteria 1808
97 Ga0207691_10019744 3300025940 Bacteria 6372
98 Ga0207691_10054121 3300025940 Bacteria 3661
99 Ga0207679_10157951 3300025945 Bacteria 1853
100 Ga0207651_10039200 3300025960 Bacteria 3122
101 Ga0207712_10034636 3300025961 Bacteria 3423
102 Ga0207668_10017666 3300025972 Bacteria 4474
103 Ga0207658_10139295 3300025986 Bacteria 1961
104 Ga0207677_10013719 3300026023 Bacteria 4704
105 Ga0207678_10006734 3300026067 Bacteria 10190
106 Ga0207648_10055263 3300026089 Bacteria 3466
107 Ga0207676_10120462 3300026095 Bacteria 2212
108 Ga0207675_100034522 3300026118 Bacteria 4716
109 Ga0207675_100050679 3300026118 Bacteria 3874
110 Ga0207683_10053368 3300026121 Bacteria 3544
111 Ga0207683_10121613 3300026121 Bacteria 2344
112 Ga0209179_1007127 3300027512 Bacteria 1833
113 Ga0207428_10028737 3300027907 Bacteria 4616
114 Ga0268266_10087564 3300028379 Bacteria 2725
115 Ga0307516_10000290 3300031730 Bacteria 65231
116 Ga0307516_10008181 3300031730 Bacteria 11877
117 Ga0373927_0045382 3300035695 Bacteria 2843
118 Ga0373925_0015054 3300037068 Bacteria 5591
119 Ga0373925_0023873 3300037068 Bacteria 4460
120 Ga0395899_0046699 3300037312 Unclassified 3225
121 Ga0395900_0013799 3300037418 Bacteria 8246
122 Ga0395898_0073349 3300037466 Bacteria 3307
123 Ga0395901_0022498 3300038443 Bacteria 6462
124 Ga0439460_0000324 3300042461 Bacteria 10044
125 Ga0466965_0001209 3300044683 Bacteria 10204
126 Ga0495592_0077172 3300046454 Bacteria 2416
127 Ga0495653_0169171 3300046463 Bacteria 1510
128 Ga0495605_0088430 3300046474 Bacteria 1439
129 Ga0495664_0012966 3300046477 Bacteria 4725
130 Ga0495610_0107643 3300046512 Unclassified 1239
131 Ga0495630_0055982 3300046517 Bacteria 2955
132 Ga0495630_0095119 3300046517 Bacteria 2252
133 Ga0495632_0015687 3300046519 Bacteria 4236
134 Ga0495667_0049970 3300046559 Bacteria 2761
135 Ga0495656_0107187 3300046615 Bacteria 1301
136 Ga0495668_0161531 3300046616 Bacteria 1227
137 Ga0495634_0023272 3300046642 Bacteria 4356
138 Ga0495625_0033999 3300046660 Bacteria 3764
139 Ga0495646_0055581 3300046680 Bacteria 2377
140 Ga0495669_0001834 3300046684 Bacteria 8694
141 Ga0495624_0070153 3300046690 Bacteria 2182
142 Ga0495581_0031202 3300047315 Bacteria 3088
143 Ga0495674_0235483 3300047319 Bacteria 1510
144 Ga0495684_0048116 3300047471 Bacteria 3261
145 Ga0495602_0051192 3300048088 Bacteria 3681
146 Ga0496100_0108328 3300048903 Bacteria 1926
147 Ga0496101_0145187 3300048904 Bacteria 1811
148 Ga0496102_0042058 3300048905 Bacteria 4141
149 Ga0496102_0073071 3300048905 Unclassified 3152
150 Ga0496104_0016296 3300048907 Bacteria 6747
151 Ga0496104_0071072 3300048907 Bacteria 3309
152 Ga0496104_0103857 3300048907 Unclassified 2722
153 Ga0496106_0022500 3300048909 Bacteria 4684
154 Ga0496107_0008486 3300048910 Bacteria 7112
155 Ga0496109_0137049 3300048912 Bacteria 2287
156 Ga0496110_0441178 3300048913 Bacteria 1186
157 Ga0496111_0205731 3300048914 Bacteria 1463
158 Ga0496112_0083217 3300048915 Bacteria 3165
159 Ga0496113_0058500 3300048916 Bacteria 2900
160 Ga0496113_0102926 3300048916 Unclassified 2215
161 Ga0496114_0022331 3300048917 Bacteria 5156
162 Ga0496115_0003821 3300048918 Bacteria 10853
163 Ga0496115_0363107 3300048918 Bacteria 1180
164 nmdc:mga00v17_165493_c1 3300050491 Bacteria 1425
165 nmdc:mga0yw44_96560_c1 3300050492 Bacteria 1876
166 nmdc:mga0k408_35886_c1 3300050493 Unclassified 2844
167 nmdc:mga06z11_39884_c1 3300050494 Bacteria 2339
168 nmdc:mga05p37_195558_c1 3300050507 Bacteria 2452
169 nmdc:mga0qj67_116943_c1 3300050509 Bacteria 2155
170 nmdc:mga06r32_106293_c1 3300050510 Bacteria 2757
171 nmdc:mga06r32_98782_c1 3300050510 Bacteria 2862
172 nmdc:mga08y16_27463_c1 3300050511 Bacteria 5999
173 nmdc:mga08y16_351209_c1 3300050511 Bacteria 1515
174 nmdc:mga0n895_107847_c1 3300050512 Bacteria 2799
175 Ga0495601_0155855 3300053077 Bacteria 1491
176 Ga0500636_0068179 3300053177 Bacteria 2066
177 Ga0500661_010242 3300055283 Bacteria 1708
178 Ga0530510_0001580 3300061734 Bacteria 15358
179 2513877025 2513237139 Bacteria 8737671
180 2793062925 2791355196 Bacteria 7323613
181 2824698323 2824696289 Bacteria 8335049
182 2935966891 2935959822 Bacteria 7869783
183 Ga0496126_0025145
184 rootH1_10370242
185 JGI25404J52841_10017420
186 JGI25404J52841_10018234
187 Ga0065707_10006452
188 Ga0070683_100112325
189 Ga0070690_100038321
190 Ga0068868_100012184
191 Ga0070691_10006557
192 Ga0070691_10028101
193 Ga0070661_100046780
194 Ga0070669_100083046
195 Ga0070675_100052251
196 Ga0070671_100114558
197 Ga0070674_100006491
198 Ga0070674_100049827
199 Ga0070673_100006041
200 Ga0070673_100024259
201 Ga0070700_100008077
202 Ga0070694_100039124
203 Ga0070663_100107686
204 Ga0070678_100075529
205 Ga0070662_100034889
206 Ga0070681_10121107
207 Ga0070706_100115433
208 Ga0070679_100112341
209 Ga0070684_100110966
210 Ga0070697_100094774
211 Ga0070672_100009719
212 Ga0070686_100087888
213 Ga0070695_100015329
214 Ga0070665_100051896
215 Ga0068852_100094571
216 Ga0068852_100172333
217 Ga0068864_100045066
218 Ga0068866_10029623
219 Ga0068861_100176779
220 Ga0068858_100268234
221 Ga0068862_100180634
222 Ga0081455_10003890
223 Ga0081455_10031288
224 Ga0081540_1000280
225 Ga0081540_1006772
226 Ga0081540_1007655
227 Ga0081540_1018054
228 Ga0081540_1019417
229 Ga0081540_1020205
230 Ga0081540_1033384
231 Ga0075364_10098842
232 Ga0070715_10037449
233 Ga0070712_100004175
234 Ga0075431_100088890
235 Ga0075431_100209956
236 Ga0099795_10000852
237 Ga0099795_10006946
238 Ga0099795_10019354
239 Ga0111539_10016313
240 Ga0111539_10126921
241 Ga0111539_10540718
242 Ga0105245_10021243
243 Ga0105245_10044946
244 Ga0114129_10179752
245 Ga0105243_10015271
246 Ga0105242_10020576
247 Ga0105237_10160514
248 Ga0099796_10001399
249 Ga0099796_10012400
250 Ga0105239_10048363
251 Ga0105246_10013656
252 Ga0105246_10067801
253 Ga0163162_10186859
254 Ga0157375_10038394
255 Ga0157375_10203952
256 Ga0157375_10225242
257 Ga0163163_10135159
258 Ga0163163_10256509
259 Ga0157379_10007866
260 Ga0157379_10110472
261 Ga0157379_10110581
262 Ga0157376_10029858
263 Ga0163161_10179384
264 Ga0209455_1001649
265 Ga0207688_10015668
266 Ga0207685_10054038
267 Ga0207699_10004684
268 Ga0207699_10037283
269 Ga0207684_10036320
270 Ga0207707_10052997
271 Ga0207693_10007654
272 Ga0207681_10037279
273 Ga0207659_10117651
274 Ga0207687_10038130
275 Ga0207706_10053638
276 Ga0207686_10069206
277 Ga0207669_10093444
278 Ga0207669_10115643
279 Ga0207691_10019744
280 Ga0207691_10054121
281 Ga0207679_10157951
282 Ga0207651_10039200
283 Ga0207712_10034636
284 Ga0207668_10017666
285 Ga0207658_10139295
286 Ga0207677_10013719
287 Ga0207678_10006734
288 Ga0207648_10055263
289 Ga0207676_10120462
290 Ga0207675_100034522
291 Ga0207675_100050679
292 Ga0207683_10053368
293 Ga0207683_10121613
294 Ga0209179_1007127
295 Ga0207428_10028737
296 Ga0268266_10087564
297 Ga0307516_10000290
298 Ga0307516_10008181
299 Ga0373927_0045382
300 Ga0373925_0015054
301 Ga0373925_0023873
302 Ga0395899_0046699
303 Ga0395900_0013799
304 Ga0395898_0073349
305 Ga0395901_0022498
306 Ga0439460_0000324
307 Ga0466965_0001209
308 Ga0495592_0077172
309 Ga0495653_0169171
310 Ga0495605_0088430
311 Ga0495664_0012966
312 Ga0495610_0107643
313 Ga0495630_0055982
314 Ga0495630_0095119
315 Ga0495632_0015687
316 Ga0495667_0049970
317 Ga0495656_0107187
318 Ga0495668_0161531
319 Ga0495634_0023272
320 Ga0495625_0033999
321 Ga0495646_0055581
322 Ga0495669_0001834
323 Ga0495624_0070153
324 Ga0495581_0031202
325 Ga0495674_0235483
326 Ga0495684_0048116
327 Ga0495602_0051192
328 Ga0496100_0108328
329 Ga0496101_0145187
330 Ga0496102_0042058
331 Ga0496102_0073071
332 Ga0496104_0016296
333 Ga0496104_0071072
334 Ga0496104_0103857
335 Ga0496106_0022500
336 Ga0496107_0008486
337 Ga0496109_0137049
338 Ga0496110_0441178
339 Ga0496111_0205731
340 Ga0496112_0083217
341 Ga0496113_0058500
342 Ga0496113_0102926
343 Ga0496114_0022331
344 Ga0496115_0003821
345 Ga0496115_0363107
346 nmdc:mga00v17_165493_c1
347 nmdc:mga0yw44_96560_c1
348 nmdc:mga0k408_35886_c1
349 nmdc:mga06z11_39884_c1
350 nmdc:mga05p37_195558_c1
351 nmdc:mga0qj67_116943_c1
352 nmdc:mga06r32_106293_c1
353 nmdc:mga06r32_98782_c1
354 nmdc:mga08y16_27463_c1
355 nmdc:mga08y16_351209_c1
356 nmdc:mga0n895_107847_c1
357 Ga0495601_0155855
358 Ga0500636_0068179
359 Ga0500661_010242
360 Ga0530510_0001580
361 2513877025
362 2793062925
363 2824698323
364 2935966891

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Structural Annotation

Top 5 Hits

ID Description Score Start End
4usz-assembly1.cif.gz_A crystal structure of the first bacterial vanadium dependant iodoperoxidase 0.7875 22 373
7f18-assembly2.cif.gz_B crystal structure of a mutant of acid phosphatase from pseudomonas aeruginosa (q57h/w58p/d135r) 0.7661 180 374
4cit-assembly1.cif.gz_A crystal structure of the first bacterial vanadium dependant iodoperoxidase 0.7631 22 374
3w35-assembly1.cif.gz_B crystal structure of apo-type bacterial vanadium-dependent chloroperoxidase 0.7316 44 373
4usz-assembly1.cif.gz_A crystal structure of the first bacterial vanadium dependant iodoperoxidase 0.7272 22 373
ID Description Score Start End Superfamily
1idqA02 Mainly Alpha;Orthogonal Bundle;Vanadium-containing Chloroperoxidase; domain 2;Vanadium-containing Chloroperoxidase, domain 2 0.7966 177 373 1.10.606.10
4citA00 Mainly Alpha;Orthogonal Bundle;Vanadium-containing Chloroperoxidase; domain 2; 0.7631 22 374 1.10.606.20
af_Q54FF5_166_492_1.10.606.10 Mainly Alpha;Orthogonal Bundle;Vanadium-containing Chloroperoxidase; domain 2;Vanadium-containing Chloroperoxidase, domain 2 0.746 162 373 1.10.606.10
4citA00 Mainly Alpha;Orthogonal Bundle;Vanadium-containing Chloroperoxidase; domain 2; 0.7067 22 374 1.10.606.20
2ipbA00 Mainly Alpha;Up-down Bundle;Vanadium-containing Chloroperoxidase; domain 1;Phosphatidic acid phosphatase type 2/haloperoxidase 0.6155 174 374 1.20.144.10
ID Description Score Start End GO Terms
AF-A0A535S508-F1-model_v4 Vanadium-dependent haloperoxidase 0.954 173 373 GO:0004601
AF-A0A7Z0TKT9-F1-model_v4 Vanadium-dependent haloperoxidase 0.9539 166 373 GO:0004601
AF-A0A428XS26-F1-model_v4 Phosphatidic acid phosphatase type 2/haloperoxidase domain-containing protein 0.9508 249 373
AF-A0A3N5HL15-F1-model_v4 Phosphatase PAP2 family protein 0.9502 166 373
AF-A0A7V9BJV0-F1-model_v4 Vanadium-dependent haloperoxidase 0.943 189 373 GO:0004601

Map