F278722

General Info

Members Datasets Scaffolds Average Seq Length
182 133 364 455

Family's Representative Sequence

Representative Sequence 3300005458|Ga0070681_10093260|Ga0070681_100932602
Length 488
Sequence MRTRVQNMRMQTDDLLERTAVLARRYLDSLDERPVRAEATLAELRASLVTPLPEQGEDPLTVIEALADNAEPGLIGMAGPRYFGFVIGGHLPATLAADWLTSTWDQNAGIYACGPAASVVEEAVGAWLVELLGLPAETSFGLVTGGQMANYTCLAAARHAVLQRAGWDVEERGLFGAPEIEVIVGAEAHATILTALQYLGLGRARVTSVPTDDQGRIEADALAAALPPAGERPLIVCLQAGNVNTGAFDPFERAIELVRAAHPDAWVHVDGAFGLWAAAVPSLRHLVSGLDRADSWAVDGHKWLNVPYDSGFALVAQADAHRAALAPASAAYIEYGAAERDEFAWVPEYSRRARGFPAYAALRSLGRTGLVDMIERACGVARSMAASLAEAPGVEILNDVVLNQALVRFSPPGSGHAFTREVIRRVQEDGTCWMSGTTWHGMAAMRISVTNWSTTEADGQRSVEAILRCAREAAAATAASGPAARTAD

Samples

Sample ID Description Type Environment
1 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
2 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
3 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
4 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
5 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
6 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
7 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
8 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
9 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
10 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
11 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
12 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
13 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
14 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
15 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
16 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
17 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
18 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
19 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
20 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
21 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
22 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
23 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
24 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
25 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
30 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
31 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
32 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
33 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
34 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
35 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
36 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
37 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
38 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
39 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
40 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
41 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
42 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
43 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
44 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
45 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
46 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
47 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
48 3300041408 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z062817_5195 Metagenome Rhizosphere
49 3300041410 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z082817_5596 Metagenome Rhizosphere
50 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
51 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
52 3300042001 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z081617_5542 Metagenome Rhizosphere
53 3300042009 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0220FE14Z071817_5348 Metagenome Rhizosphere
54 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
55 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
56 3300042437 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z081617_5554 Metagenome Rhizosphere
57 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
58 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
59 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
60 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
61 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
62 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
63 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
64 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
65 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
66 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
67 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
68 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
69 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
70 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
71 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
72 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
73 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
74 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
75 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
76 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
77 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
78 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
79 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
80 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
81 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
82 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
83 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
84 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
85 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
86 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
87 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
88 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
89 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
90 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
91 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
92 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
93 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
94 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
95 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
96 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
97 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
98 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
99 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
100 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
101 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
102 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
103 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
104 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
105 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
106 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
107 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
108 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
109 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
110 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
111 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
112 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
113 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
114 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
115 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
116 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
117 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
118 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
119 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
120 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
121 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
122 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
123 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
124 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
125 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
126 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
127 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
128 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
129 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
130 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
131 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
132 2643221567 Phycicoccus sp. Root563 Isolate Unclassified
133 2643221624 Phycicoccus sp. Root101 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 98.9
Metatranscriptomes 0
Isolates 1.1

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.55
Nodule 0
Rhizoplane 1.1
Rhizosphere 92.86
Stem 0
Stem Tuber 0
Unclassified 1.1

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070681_10093260 3300005458 Bacteria 2960
2 Ga0070680_100021818 3300005336 Bacteria 5093
3 Ga0070682_100027161 3300005337 Bacteria 3433
4 Ga0070708_100035820 3300005445 Bacteria 4325
5 Ga0070699_100045772 3300005518 Bacteria 3786
6 Ga0070695_100017715 3300005545 Bacteria 4321
7 Ga0070696_100076828 3300005546 Bacteria 2358
8 Ga0068859_100018793 3300005617 Bacteria 6945
9 Ga0081538_10018234 3300005981 Bacteria 5284
10 Ga0070715_10000487 3300006163 Bacteria 10340
11 Ga0075370_10000125 3300006353 Bacteria 25536
12 Ga0075428_100168917 3300006844 Bacteria 2372
13 Ga0075430_100063393 3300006846 Bacteria 3104
14 Ga0075434_100259946 3300006871 Unclassified 1755
15 Ga0075429_100020835 3300006880 Bacteria 5689
16 Ga0097620_100018792 3300006931 Bacteria 6945
17 Ga0105245_10308662 3300009098 Bacteria 1555
18 Ga0114129_10038993 3300009147 Bacteria 6697
19 Ga0105246_10275342 3300011119 Bacteria 1347
20 Ga0157372_10154328 3300013307 Bacteria 2651
21 Ga0163163_10311047 3300014325 Bacteria 1628
22 Ga0157380_10097108 3300014326 Bacteria 2444
23 Ga0182008_10004282 3300014497 Bacteria 8365
24 Ga0182008_10018714 3300014497 Bacteria 3585
25 Ga0182008_10053601 3300014497 Bacteria 1996
26 Ga0182008_10055053 3300014497 Bacteria 1968
27 Ga0182006_1007971 3300015261 Bacteria 4817
28 Ga0207707_10028325 3300025912 Bacteria 4896
29 Ga0207657_10002877 3300025919 Bacteria 18504
30 Ga0207664_10055432 3300025929 Bacteria 3145
31 Ga0207683_10046179 3300026121 Bacteria 3810
32 Ga0307515_10000014 3300028794 Bacteria 562358
33 Ga0307511_10000562 3300030521 Bacteria 39912
34 Ga0307512_10091522 3300030522 Bacteria 2115
35 Ga0265316_10070912 3300031344 Bacteria 2687
36 Ga0307509_10000930 3300031507 Bacteria 50124
37 Ga0307509_10083375 3300031507 Bacteria 3295
38 Ga0307408_100010562 3300031548 Bacteria 6089
39 Ga0307408_100214404 3300031548 Bacteria 1567
40 Ga0307508_10161119 3300031616 Bacteria 1847
41 Ga0307405_10037424 3300031731 Bacteria 2916
42 Ga0307405_10109385 3300031731 Bacteria 1869
43 Ga0307405_10157218 3300031731 Bacteria 1606
44 Ga0307405_10165822 3300031731 Bacteria 1570
45 Ga0307413_10106904 3300031824 Bacteria 1863
46 Ga0307412_10005259 3300031911 Bacteria 7260
47 Ga0307412_10082459 3300031911 Bacteria 2227
48 Ga0307409_100047323 3300031995 Bacteria 3263
49 Ga0307409_100060981 3300031995 Bacteria 2945
50 Ga0307416_100011090 3300032002 Bacteria 5991
51 Ga0307416_100141681 3300032002 Bacteria 2186
52 Ga0307411_10002660 3300032005 Bacteria 8004
53 Ga0307415_100164581 3300032126 Bacteria 1723
54 Ga0307507_10101848 3300033179 Bacteria 2399
55 Ga0395899_0017012 3300037312 Bacteria 5541
56 Ga0395900_0081412 3300037418 Bacteria 3326
57 Ga0395898_0035072 3300037466 Bacteria 4992
58 Ga0395905_0021328 3300037471 Bacteria 6128
59 Ga0439453_0001339 3300041408 Bacteria 3138
60 Ga0439461_0005861 3300041410 Bacteria 2117
61 Ga0439466_0021823 3300041411 Bacteria 2265
62 Ga0439431_0018698 3300041997 Bacteria 1642
63 Ga0439441_009541 3300042001 Bacteria 1609
64 Ga0439451_001939 3300042009 Bacteria 4134
65 Ga0439446_0001221 3300042156 Bacteria 5752
66 Ga0439446_0001234 3300042156 Bacteria 5731
67 Ga0439434_0005697 3300042435 Bacteria 3637
68 Ga0439444_0002297 3300042437 Bacteria 2594
69 Ga0451577_0000593 3300042876 Bacteria 58069
70 Ga0451577_0001287 3300042876 Bacteria 34501
71 Ga0451577_0001491 3300042876 Bacteria 30995
72 Ga0466963_0001397 3300044694 Bacteria 12943
73 Ga0466963_0001952 3300044694 Bacteria 11311
74 Ga0466963_0002043 3300044694 Bacteria 11116
75 Ga0453684_0001961 3300044712 Bacteria 53017
76 Ga0453684_0002368 3300044712 Bacteria 46041
77 Ga0466968_0017768 3300044735 Bacteria 2847
78 Ga0466958_0002381 3300045836 Bacteria 9409
79 Ga0466967_0016753 3300045976 Bacteria 5791
80 Ga0466967_0021214 3300045976 Bacteria 5269
81 Ga0466967_0047404 3300045976 Bacteria 3746
82 Ga0466967_0060560 3300045976 Bacteria 3354
83 Ga0495592_0000048 3300046454 Bacteria 114599
84 Ga0495603_0084666 3300046455 Bacteria 1857
85 Ga0495629_0058194 3300046459 Bacteria 2702
86 Ga0495651_0000276 3300046462 Bacteria 39992
87 Ga0495653_0000995 3300046463 Bacteria 21821
88 Ga0495582_0028927 3300046473 Bacteria 3042
89 Ga0495662_0120782 3300046476 Bacteria 1286
90 Ga0495608_0005709 3300046511 Bacteria 8882
91 Ga0495618_0005030 3300046514 Bacteria 8076
92 Ga0495618_0113305 3300046514 Bacteria 1736
93 Ga0495628_0000026 3300046516 Bacteria 127398
94 Ga0495630_0213573 3300046517 Bacteria 1472
95 Ga0495666_0050548 3300046526 Bacteria 1998
96 Ga0495652_0001333 3300046529 Bacteria 27472
97 Ga0495640_0067626 3300046533 Bacteria 2406
98 Ga0495586_0005430 3300046535 Bacteria 6816
99 Ga0495587_0000080 3300046536 Bacteria 75321
100 Ga0495645_0000016 3300046543 Bacteria 158415
101 Ga0495667_0046721 3300046559 Bacteria 2862
102 Ga0495634_0005241 3300046642 Bacteria 10020
103 Ga0495657_0013518 3300046675 Bacteria 6019
104 Ga0495657_0034568 3300046675 Bacteria 3510
105 Ga0495599_0000016 3300046678 Bacteria 169605
106 Ga0495623_0000385 3300046679 Bacteria 28941
107 Ga0495646_0000472 3300046680 Bacteria 21408
108 Ga0495647_0005960 3300046681 Bacteria 4015
109 Ga0495658_0018217 3300046683 Bacteria 3646
110 Ga0495658_0066659 3300046683 Bacteria 2080
111 Ga0495624_0069306 3300046690 Bacteria 2197
112 Ga0495600_0075466 3300046809 Bacteria 2202
113 Ga0495604_0000004 3300047317 Bacteria 456385
114 Ga0495674_0099026 3300047319 Bacteria 2482
115 Ga0495675_0000033 3300047444 Bacteria 98338
116 Ga0495602_0000036 3300048088 Bacteria 133584
117 Ga0496112_0119675 3300048915 Bacteria 2603
118 Ga0496113_0052443 3300048916 Bacteria 3046
119 Ga0496124_0051623 3300048927 Bacteria 3498
120 Ga0501031_0039862 3300049568 Bacteria 3066
121 Ga0501032_0032685 3300049569 Bacteria 3565
122 Ga0501034_0025023 3300049571 Bacteria 6074
123 Ga0501036_0000438 3300049572 Bacteria 29594
124 Ga0501036_0033634 3300049572 Bacteria 4335
125 Ga0501037_0007555 3300049573 Bacteria 7959
126 Ga0501038_0095658 3300049574 Bacteria 2481
127 Ga0501039_0009682 3300049575 Bacteria 7343
128 Ga0501040_0000592 3300049576 Bacteria 22114
129 Ga0501041_0000272 3300049577 Bacteria 24566
130 Ga0501041_0007753 3300049577 Bacteria 6304
131 Ga0501042_0000997 3300049578 Bacteria 16053
132 Ga0501042_0017110 3300049578 Bacteria 4995
133 Ga0501043_0025020 3300049579 Bacteria 4684
134 Ga0501046_0030415 3300049580 Bacteria 4383
135 Ga0501048_0001139 3300049582 Bacteria 19959
136 Ga0501067_0011130 3300049583 Bacteria 4976
137 Ga0501067_0024889 3300049583 Bacteria 3319
138 Ga0501070_0049064 3300049586 Bacteria 3506
139 Ga0501070_0062405 3300049586 Bacteria 3087
140 Ga0501071_0006394 3300049587 Bacteria 7647
141 Ga0501071_0042459 3300049587 Bacteria 3259
142 Ga0501071_0120059 3300049587 Bacteria 1948
143 Ga0501072_0000354 3300049588 Bacteria 32671
144 Ga0501072_0011592 3300049588 Bacteria 6736
145 Ga0501072_0044549 3300049588 Bacteria 3488
146 Ga0501073_0036087 3300049589 Bacteria 3513
147 Ga0501073_0054259 3300049589 Bacteria 2806
148 Ga0501074_0005675 3300049590 Bacteria 8992
149 Ga0501074_0069038 3300049590 Bacteria 2541
150 Ga0501074_0075004 3300049590 Bacteria 2428
151 Ga0501075_0000676 3300049591 Bacteria 21040
152 Ga0501075_0055438 3300049591 Bacteria 2982
153 Ga0501076_0005310 3300049592 Bacteria 9242
154 Ga0501076_0008506 3300049592 Bacteria 7521
155 Ga0501077_0005076 3300049593 Bacteria 7988
156 Ga0501077_0005913 3300049593 Bacteria 7462
157 Ga0501079_0004229 3300049741 Bacteria 10649
158 Ga0501079_0068628 3300049741 Bacteria 2736
159 Ga0501080_0018136 3300049742 Bacteria 6515
160 Ga0501080_0111096 3300049742 Bacteria 2540
161 Ga0501081_0023839 3300049743 Bacteria 4104
162 Ga0501081_0052042 3300049743 Bacteria 2824
163 Ga0501035_0059177 3300049822 Bacteria 3412
164 Ga0501045_0000357 3300049824 Bacteria 27239
165 Ga0501045_0009325 3300049824 Bacteria 6863
166 Ga0501045_0018728 3300049824 Bacteria 4929
167 nmdc:mga09592_1432_c1 3300050508 Bacteria 19144
168 nmdc:mga0n895_136939_c1 3300050512 Bacteria 2475
169 nmdc:mga0n895_256064_c1 3300050512 Unclassified 1776
170 Ga0495601_0000101 3300053077 Bacteria 47661
171 Ga0495612_0034543 3300053078 Bacteria 2048
172 Ga0495619_0000235 3300053085 Bacteria 40323
173 Ga0495619_0009263 3300053085 Bacteria 6220
174 Ga0501084_0000144 3300054114 Bacteria 54020
175 Ga0501084_0094206 3300054114 Bacteria 2514
176 Ga0501082_0001289 3300060353 Bacteria 21965
177 Ga0501082_0106234 3300060353 Bacteria 2429
178 Ga0501082_0146319 3300060353 Bacteria 2051
179 Ga0530510_0004280 3300061734 Bacteria 9876
180 Ga0530510_0035266 3300061734 Bacteria 3605
181 2643852205 2643221567 Bacteria 4163945
182 2644136364 2643221624 Bacteria 4384879
183 Ga0070681_10093260
184 Ga0070680_100021818
185 Ga0070682_100027161
186 Ga0070708_100035820
187 Ga0070699_100045772
188 Ga0070695_100017715
189 Ga0070696_100076828
190 Ga0068859_100018793
191 Ga0081538_10018234
192 Ga0070715_10000487
193 Ga0075370_10000125
194 Ga0075428_100168917
195 Ga0075430_100063393
196 Ga0075434_100259946
197 Ga0075429_100020835
198 Ga0097620_100018792
199 Ga0105245_10308662
200 Ga0114129_10038993
201 Ga0105246_10275342
202 Ga0157372_10154328
203 Ga0163163_10311047
204 Ga0157380_10097108
205 Ga0182008_10004282
206 Ga0182008_10018714
207 Ga0182008_10053601
208 Ga0182008_10055053
209 Ga0182006_1007971
210 Ga0207707_10028325
211 Ga0207657_10002877
212 Ga0207664_10055432
213 Ga0207683_10046179
214 Ga0307515_10000014
215 Ga0307511_10000562
216 Ga0307512_10091522
217 Ga0265316_10070912
218 Ga0307509_10000930
219 Ga0307509_10083375
220 Ga0307408_100010562
221 Ga0307408_100214404
222 Ga0307508_10161119
223 Ga0307405_10037424
224 Ga0307405_10109385
225 Ga0307405_10157218
226 Ga0307405_10165822
227 Ga0307413_10106904
228 Ga0307412_10005259
229 Ga0307412_10082459
230 Ga0307409_100047323
231 Ga0307409_100060981
232 Ga0307416_100011090
233 Ga0307416_100141681
234 Ga0307411_10002660
235 Ga0307415_100164581
236 Ga0307507_10101848
237 Ga0395899_0017012
238 Ga0395900_0081412
239 Ga0395898_0035072
240 Ga0395905_0021328
241 Ga0439453_0001339
242 Ga0439461_0005861
243 Ga0439466_0021823
244 Ga0439431_0018698
245 Ga0439441_009541
246 Ga0439451_001939
247 Ga0439446_0001221
248 Ga0439446_0001234
249 Ga0439434_0005697
250 Ga0439444_0002297
251 Ga0451577_0000593
252 Ga0451577_0001287
253 Ga0451577_0001491
254 Ga0466963_0001397
255 Ga0466963_0001952
256 Ga0466963_0002043
257 Ga0453684_0001961
258 Ga0453684_0002368
259 Ga0466968_0017768
260 Ga0466958_0002381
261 Ga0466967_0016753
262 Ga0466967_0021214
263 Ga0466967_0047404
264 Ga0466967_0060560
265 Ga0495592_0000048
266 Ga0495603_0084666
267 Ga0495629_0058194
268 Ga0495651_0000276
269 Ga0495653_0000995
270 Ga0495582_0028927
271 Ga0495662_0120782
272 Ga0495608_0005709
273 Ga0495618_0005030
274 Ga0495618_0113305
275 Ga0495628_0000026
276 Ga0495630_0213573
277 Ga0495666_0050548
278 Ga0495652_0001333
279 Ga0495640_0067626
280 Ga0495586_0005430
281 Ga0495587_0000080
282 Ga0495645_0000016
283 Ga0495667_0046721
284 Ga0495634_0005241
285 Ga0495657_0013518
286 Ga0495657_0034568
287 Ga0495599_0000016
288 Ga0495623_0000385
289 Ga0495646_0000472
290 Ga0495647_0005960
291 Ga0495658_0018217
292 Ga0495658_0066659
293 Ga0495624_0069306
294 Ga0495600_0075466
295 Ga0495604_0000004
296 Ga0495674_0099026
297 Ga0495675_0000033
298 Ga0495602_0000036
299 Ga0496112_0119675
300 Ga0496113_0052443
301 Ga0496124_0051623
302 Ga0501031_0039862
303 Ga0501032_0032685
304 Ga0501034_0025023
305 Ga0501036_0000438
306 Ga0501036_0033634
307 Ga0501037_0007555
308 Ga0501038_0095658
309 Ga0501039_0009682
310 Ga0501040_0000592
311 Ga0501041_0000272
312 Ga0501041_0007753
313 Ga0501042_0000997
314 Ga0501042_0017110
315 Ga0501043_0025020
316 Ga0501046_0030415
317 Ga0501048_0001139
318 Ga0501067_0011130
319 Ga0501067_0024889
320 Ga0501070_0049064
321 Ga0501070_0062405
322 Ga0501071_0006394
323 Ga0501071_0042459
324 Ga0501071_0120059
325 Ga0501072_0000354
326 Ga0501072_0011592
327 Ga0501072_0044549
328 Ga0501073_0036087
329 Ga0501073_0054259
330 Ga0501074_0005675
331 Ga0501074_0069038
332 Ga0501074_0075004
333 Ga0501075_0000676
334 Ga0501075_0055438
335 Ga0501076_0005310
336 Ga0501076_0008506
337 Ga0501077_0005076
338 Ga0501077_0005913
339 Ga0501079_0004229
340 Ga0501079_0068628
341 Ga0501080_0018136
342 Ga0501080_0111096
343 Ga0501081_0023839
344 Ga0501081_0052042
345 Ga0501035_0059177
346 Ga0501045_0000357
347 Ga0501045_0009325
348 Ga0501045_0018728
349 nmdc:mga09592_1432_c1
350 nmdc:mga0n895_136939_c1
351 nmdc:mga0n895_256064_c1
352 Ga0495601_0000101
353 Ga0495612_0034543
354 Ga0495619_0000235
355 Ga0495619_0009263
356 Ga0501084_0000144
357 Ga0501084_0094206
358 Ga0501082_0001289
359 Ga0501082_0106234
360 Ga0501082_0146319
361 Ga0530510_0004280
362 Ga0530510_0035266
363 2643852205
364 2644136364

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00282

Pyridoxal_deC

Pyridoxal-dependent decarboxylase conserved domain

42

410

0.88

PF01212

Beta_elim_lyase

Beta-eliminating lyase

171

410

0.84

PF00266

Aminotran_5

Aminotransferase class-V

173

331

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
6khp-assembly1.cif.gz_A-2 crystal structure of oryza sativa tdc with plp and tryptamine 0.8881 4 431
3vp6-assembly1.cif.gz_A structural characterization of glutamic acid decarboxylase; insights into the mechanism of autoinactivation 0.8877 5 431
6zek-assembly1.cif.gz_C crystal structure of mouse csad 0.8804 4 434
6enz-assembly1.cif.gz_B crystal structure of mouse gadl1 0.8784 4 434
2okj-assembly1.cif.gz_A the x-ray crystal structure of the 67kda isoform of glutamic acid decarboxylase (gad67) 0.8782 5 430
ID Description Score Start End Superfamily
af_Q8RY79_386_490_3.90.1150.10 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9544 343 432 3.90.1150.10
af_Q7G6M2_418_525_3.90.1150.10 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9449 343 431 3.90.1150.10
af_Q94I30_400_502_3.90.1150.10 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9433 343 431 3.90.1150.10
3rbfA03 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9403 344 431 3.90.1150.10
af_Q95ZS2_455_559_3.90.1150.10 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9313 343 431 3.90.1150.10
ID Description Score Start End GO Terms
AF-A0A1G7Z1M8-F1-model_v4 Uncharacterized protein 0.9765 324 430 GO:0005737
GO:0016831
AF-A0A2W4QDE6-F1-model_v4 Aspartate aminotransferase family protein 0.9753 343 431 GO:0008483
AF-A0A349LFI0-F1-model_v4 Aspartate aminotransferase family protein 0.9717 311 433 GO:0016831
AF-A0A2S9XSH9-F1-model_v4 L-2,4-diaminobutyrate decarboxylase (EC 4.1.1.86) 0.964 204 285 GO:0019752
GO:0030170
GO:0033983
AF-A0A7W0XZD9-F1-model_v4 Aspartate aminotransferase family protein 0.9593 246 431 GO:0008483
GO:0016831
GO:0019752
GO:0030170

Map