F278583

General Info

Members Datasets Scaffolds Average Seq Length
182 137 364 329

Family's Representative Sequence

Representative Sequence 3300005340|Ga0070689_100100875|Ga0070689_1001008752
Length 367
Sequence MREFQRPRSSPGASCLARLRPGCSSDRLRRMAMSLTGQFPAYRPRRLRQTPALRRLVAETRLSVDQLVLPLFVRPGRKLRRAIGAMPGVFQLSPDELLREASRAHALGVPAVLIFGIPARKDTQASGAYARDGIVQETVRLLKKELPELVVITDVCLCEYMSHGHCGIVVRDDRAGRVLNDPSLKLLARTAASHVEAGADIVAPSDMMDGRVRAIRQALDQGGFTDAPIMSYAAKFASAFYGPFREAAESAPKLGDRRSYQMNPANVLEALREVALDIQEGADIVMVKPALAYLDVLHRVKMEFGYPTAAYAVSAEYSMIKAASANGWIDESAVTLESLLAMRRAGADILITYSAREVAQWLKEGRA

Samples

Sample ID Description Type Environment
1 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
6 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
7 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
8 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
9 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
10 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
11 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
12 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
13 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
14 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
15 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
16 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
17 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
18 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
19 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
20 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
21 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
22 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
23 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
24 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
25 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
26 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
27 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
28 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
29 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
30 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
31 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
32 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
33 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
34 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
35 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
36 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
37 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
38 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
39 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
40 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
54 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
55 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
56 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
57 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
58 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
59 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
60 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
61 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
62 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
63 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
64 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
65 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
66 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
67 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
68 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
69 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
70 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
71 3300034816 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_3 Metagenome Rhizosphere
72 3300034818 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3 Metagenome Rhizosphere
73 3300034820 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2 Metagenome Rhizosphere
74 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
75 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
76 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
77 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
78 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
79 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
80 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
81 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
82 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
83 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
84 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
85 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
86 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
87 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
88 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
89 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
90 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
91 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
92 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
93 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
94 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
95 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
96 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
97 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
98 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
99 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
100 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
101 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
102 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
103 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
104 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
105 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
106 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
107 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
108 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
109 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
110 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
111 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
112 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
113 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
114 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
115 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
116 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
117 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
118 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
119 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
120 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
121 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
122 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
123 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
124 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
125 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
126 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
127 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
128 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere
129 2510917027 Brevibacillus sp. CF112 Isolate Rhizosphere
130 2512564013 Brevibacillus sp. BC25 Isolate Rhizosphere
131 2523533628 Maridesulfovibrio zosterae DSM 11974 Isolate Rhizosphere
132 2857460504 Brevibacillus sp. R-74223 Isolate Unclassified
133 2857465823 Brevibacillus sp. R-74266 Isolate Unclassified
134 2857591370 Brevibacillus sp. R-71934 Isolate Unclassified
135 2915597211 Brevibacillus brevis Ag35 Isolate Nodule
136 2915606848 Brevibacillus sp. HD1.4A Isolate Rhizosphere
137 2929183550 Brevibacillus sp. R-71971 Hybrid assembly Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 95.05
Metatranscriptomes 0
Isolates 4.95

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.3
Nodule 0.55
Rhizoplane 2.75
Rhizosphere 91.21
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070689_100100875 3300005340 Bacteria 2284
2 Ga0070683_100162439 3300005329 Bacteria 2119
3 Ga0070666_10001141 3300005335 Bacteria 16158
4 Ga0070680_100000740 3300005336 Bacteria 22791
5 Ga0070682_100034489 3300005337 Bacteria 3082
6 Ga0070660_100046250 3300005339 Bacteria 3335
7 Ga0070689_100132697 3300005340 Bacteria 1998
8 Ga0070691_10114753 3300005341 Bacteria 1351
9 Ga0070687_100013162 3300005343 Bacteria 3677
10 Ga0070661_100066267 3300005344 Bacteria 2653
11 Ga0070661_100293842 3300005344 Bacteria 1263
12 Ga0070668_100335657 3300005347 Bacteria 1276
13 Ga0070669_100116190 3300005353 Bacteria 2036
14 Ga0070659_100001108 3300005366 Bacteria 19650
15 Ga0070701_10022041 3300005438 Bacteria 3050
16 Ga0070711_100005824 3300005439 Bacteria 7399
17 Ga0070663_100054857 3300005455 Bacteria 2850
18 Ga0070662_100000234 3300005457 Bacteria 32687
19 Ga0070685_10005225 3300005466 Bacteria 6584
20 Ga0070685_10008810 3300005466 Bacteria 5197
21 Ga0070685_10014118 3300005466 Bacteria 4225
22 Ga0070684_100057152 3300005535 Bacteria 3406
23 Ga0070686_100000483 3300005544 Bacteria 24107
24 Ga0070664_100104745 3300005564 Bacteria 2463
25 Ga0068856_100045943 3300005614 Bacteria 4301
26 Ga0068852_100028026 3300005616 Bacteria 4603
27 Ga0068859_100265076 3300005617 Bacteria 1810
28 Ga0075365_10039572 3300006038 Bacteria 3070
29 Ga0075363_100040045 3300006048 Bacteria 2469
30 Ga0075364_10125616 3300006051 Bacteria 1720
31 Ga0068871_100255227 3300006358 Bacteria 1528
32 Ga0075431_100124742 3300006847 Bacteria 2657
33 Ga0068865_100008699 3300006881 Bacteria 6278
34 Ga0097620_100265072 3300006931 Bacteria 1810
35 Ga0111539_10037878 3300009094 Bacteria 5818
36 Ga0111539_10153402 3300009094 Bacteria 2696
37 Ga0111539_10156681 3300009094 Bacteria 2665
38 Ga0111539_10267016 3300009094 Bacteria 1992
39 Ga0105245_10085222 3300009098 Bacteria 2896
40 Ga0105243_10041533 3300009148 Bacteria 3597
41 Ga0105242_10001870 3300009176 Bacteria 16542
42 Ga0105237_10221859 3300009545 Bacteria 1890
43 Ga0105238_10000035 3300009551 Bacteria 165866
44 Ga0105239_10128768 3300010375 Bacteria 2814
45 Ga0105246_10014297 3300011119 Bacteria 4991
46 Ga0163162_10234458 3300013306 Bacteria 1966
47 Ga0207688_10009975 3300025901 Bacteria 5167
48 Ga0207663_10019084 3300025916 Bacteria 3855
49 Ga0207662_10038242 3300025918 Bacteria 2811
50 Ga0207657_10019815 3300025919 Bacteria 6376
51 Ga0207649_10311380 3300025920 Bacteria 1154
52 Ga0207694_10000045 3300025924 Bacteria 165875
53 Ga0207687_10057247 3300025927 Bacteria 2738
54 Ga0207706_10000352 3300025933 Bacteria 49647
55 Ga0207686_10000189 3300025934 Bacteria 47718
56 Ga0207670_10182950 3300025936 Bacteria 1580
57 Ga0207661_10019158 3300025944 Bacteria 5096
58 Ga0207661_10363250 3300025944 Bacteria 1308
59 Ga0207678_10230175 3300026067 Bacteria 1587
60 Ga0207702_10225487 3300026078 Bacteria 1748
61 Ga0265337_1001234 3300028556 Bacteria 12946
62 Ga0265319_1011450 3300028563 Bacteria 3631
63 Ga0265323_10001285 3300028653 Bacteria 12534
64 Ga0265336_10001753 3300028666 Bacteria 9518
65 Ga0265336_10035197 3300028666 Bacteria 1545
66 Ga0265336_10057011 3300028666 Bacteria 1173
67 Ga0265338_10002459 3300028800 Bacteria 27681
68 Ga0265338_10003214 3300028800 Bacteria 23299
69 Ga0265338_10008884 3300028800 Bacteria 12104
70 Ga0265338_10018382 3300028800 Bacteria 7484
71 Ga0265338_10023675 3300028800 Bacteria 6300
72 Ga0265338_10025679 3300028800 Bacteria 5970
73 Ga0265338_10063867 3300028800 Bacteria 3208
74 Ga0265338_10196179 3300028800 Bacteria 1526
75 Ga0265338_10250601 3300028800 Bacteria 1306
76 Ga0265324_10017344 3300029957 Bacteria 2619
77 Ga0265324_10025702 3300029957 Bacteria 2086
78 Ga0265320_10001732 3300031240 Bacteria 15474
79 Ga0265320_10008591 3300031240 Bacteria 6235
80 Ga0265320_10019918 3300031240 Bacteria 3653
81 Ga0265325_10056493 3300031241 Bacteria 2004
82 Ga0265329_10000209 3300031242 Bacteria 30567
83 Ga0265340_10008943 3300031247 Bacteria 5396
84 Ga0265327_10001305 3300031251 Bacteria 32559
85 Ga0265316_10003464 3300031344 Bacteria 15947
86 Ga0265316_10010738 3300031344 Bacteria 8319
87 Ga0265316_10027106 3300031344 Bacteria 4752
88 Ga0265316_10034211 3300031344 Bacteria 4129
89 Ga0265316_10127075 3300031344 Bacteria 1922
90 Ga0265316_10135185 3300031344 Bacteria 1855
91 Ga0265316_10262820 3300031344 Bacteria 1265
92 Ga0265314_10000480 3300031711 Bacteria 52402
93 Ga0265314_10018215 3300031711 Bacteria 5482
94 Ga0265342_10048007 3300031712 Bacteria 2561
95 Ga0307409_100235217 3300031995 Bacteria 1664
96 Ga0307416_100246421 3300032002 Bacteria 1736
97 Ga0307411_10158392 3300032005 Bacteria 1692
98 Ga0307415_100009433 3300032126 Bacteria 5470
99 Ga0373930_0000869 3300034816 Bacteria 4316
100 Ga0373930_0045752 3300034816 Bacteria 944
101 Ga0373950_0001197 3300034818 Bacteria 3341
102 Ga0373959_0000408 3300034820 Bacteria 8294
103 Ga0373928_0000479 3300035084 Bacteria 7869
104 Ga0373929_0001301 3300035085 Bacteria 4805
105 Ga0373944_0000187 3300035089 Bacteria 13000
106 Ga0373949_0014018 3300035090 Bacteria 1782
107 Ga0373932_0000001 3300035112 Bacteria 1459067
108 Ga0373945_0020756 3300035116 Bacteria 2252
109 Ga0373954_0105435 3300035118 Bacteria 1361
110 Ga0373962_0000315 3300035242 Bacteria 10499
111 Ga0316574_0089324 3300035398 Bacteria 1963
112 Ga0373931_0000008 3300035691 Bacteria 362269
113 Ga0373927_0046295 3300035695 Bacteria 2814
114 Ga0373937_0001665 3300036401 Bacteria 18680
115 Ga0373937_0109605 3300036401 Bacteria 2567
116 Ga0373937_0411784 3300036401 Bacteria 1283
117 Ga0316584_0164991 3300036712 Bacteria 1645
118 Ga0373925_0002695 3300037068 Bacteria 14084
119 Ga0395899_0011423 3300037312 Bacteria 6798
120 Ga0395898_0045980 3300037466 Bacteria 4289
121 Ga0395901_0017793 3300038443 Bacteria 7253
122 Ga0439452_024615 3300042010 Bacteria 1537
123 Ga0439434_0007377 3300042435 Bacteria 3223
124 Ga0453684_0203995 3300044712 Bacteria 2303
125 Ga0451576_0081048 3300045051 Bacteria 3376
126 Ga0451576_0217598 3300045051 Bacteria 1995
127 Ga0451576_0262105 3300045051 Bacteria 1807
128 Ga0451576_0268358 3300045051 Bacteria 1784
129 Ga0495629_0176590 3300046459 Bacteria 1481
130 Ga0495580_0134558 3300046472 Bacteria 1714
131 Ga0495664_0108241 3300046477 Bacteria 1677
132 Ga0495630_0022810 3300046517 Bacteria 4624
133 Ga0495630_0119842 3300046517 Bacteria 1996
134 Ga0495630_0219512 3300046517 Bacteria 1451
135 Ga0495643_0000071 3300046522 Bacteria 168991
136 Ga0495640_0035866 3300046533 Bacteria 3508
137 Ga0495640_0108684 3300046533 Bacteria 1814
138 Ga0495586_0017282 3300046535 Bacteria 3834
139 Ga0495667_0021711 3300046559 Bacteria 4332
140 Ga0495667_0061390 3300046559 Bacteria 2464
141 Ga0495667_0094350 3300046559 Bacteria 1937
142 Ga0495634_0002277 3300046642 Bacteria 16062
143 Ga0495613_0047678 3300046689 Bacteria 3165
144 Ga0495604_0002564 3300047317 Bacteria 14535
145 Ga0495604_0037586 3300047317 Bacteria 3812
146 Ga0495680_0097295 3300047322 Bacteria 2197
147 Ga0495680_0194240 3300047322 Bacteria 1459
148 Ga0495675_0017068 3300047444 Bacteria 4597
149 Ga0496106_0179720 3300048909 Bacteria 1679
150 Ga0496107_0052355 3300048910 Bacteria 2945
151 Ga0496108_0164472 3300048911 Bacteria 1918
152 Ga0496109_0163735 3300048912 Bacteria 2084
153 Ga0496110_0209493 3300048913 Bacteria 1772
154 Ga0501033_0068050 3300049570 Bacteria 2619
155 Ga0501037_0059455 3300049573 Bacteria 2788
156 Ga0501040_0040989 3300049576 Bacteria 3153
157 Ga0501041_0130274 3300049577 Bacteria 1567
158 Ga0501043_0143517 3300049579 Bacteria 1869
159 Ga0501067_0173581 3300049583 Bacteria 1201
160 Ga0501074_0043515 3300049590 Bacteria 3250
161 Ga0501075_0247547 3300049591 Bacteria 1359
162 Ga0501075_0421252 3300049591 Bacteria 1018
163 Ga0501080_0042597 3300049742 Bacteria 4227
164 Ga0501035_0030779 3300049822 Bacteria 4892
165 Ga0501035_0061352 3300049822 Bacteria 3346
166 nmdc:mga03n38_41102_c1 3300050490 Bacteria 2013
167 nmdc:mga0yw44_38558_c1 3300050492 Bacteria 2828
168 nmdc:mga06r32_128791_c1 3300050510 Bacteria 2501
169 nmdc:mga08y16_302045_c1 3300050511 Bacteria 1650
170 nmdc:mga08y16_63537_c1 3300050511 Bacteria 3855
171 nmdc:mga08y16_87839_c1 3300050511 Bacteria 3239
172 nmdc:mga0n895_619229_c1 3300050512 Bacteria 1083
173 Ga0500628_000145 3300053129 Bacteria 13625
174 2511178309 2510917027 Bacteria 5287437
175 2512640107 2512564013 Bacteria 6286191
176 2524002940 2523533628 Bacteria 4098242
177 2857462432 2857460504 Bacteria 5194327
178 2857468912 2857465823 Bacteria 6772595
179 2857596436 2857591370 Bacteria 6569758
180 2915600400 2915597211 Bacteria 6475886
181 2915608128 2915606848 Bacteria 6032732
182 2929185562 2929183550 Bacteria 6377511
183 Ga0070689_100100875
184 Ga0070683_100162439
185 Ga0070666_10001141
186 Ga0070680_100000740
187 Ga0070682_100034489
188 Ga0070660_100046250
189 Ga0070689_100132697
190 Ga0070691_10114753
191 Ga0070687_100013162
192 Ga0070661_100066267
193 Ga0070661_100293842
194 Ga0070668_100335657
195 Ga0070669_100116190
196 Ga0070659_100001108
197 Ga0070701_10022041
198 Ga0070711_100005824
199 Ga0070663_100054857
200 Ga0070662_100000234
201 Ga0070685_10005225
202 Ga0070685_10008810
203 Ga0070685_10014118
204 Ga0070684_100057152
205 Ga0070686_100000483
206 Ga0070664_100104745
207 Ga0068856_100045943
208 Ga0068852_100028026
209 Ga0068859_100265076
210 Ga0075365_10039572
211 Ga0075363_100040045
212 Ga0075364_10125616
213 Ga0068871_100255227
214 Ga0075431_100124742
215 Ga0068865_100008699
216 Ga0097620_100265072
217 Ga0111539_10037878
218 Ga0111539_10153402
219 Ga0111539_10156681
220 Ga0111539_10267016
221 Ga0105245_10085222
222 Ga0105243_10041533
223 Ga0105242_10001870
224 Ga0105237_10221859
225 Ga0105238_10000035
226 Ga0105239_10128768
227 Ga0105246_10014297
228 Ga0163162_10234458
229 Ga0207688_10009975
230 Ga0207663_10019084
231 Ga0207662_10038242
232 Ga0207657_10019815
233 Ga0207649_10311380
234 Ga0207694_10000045
235 Ga0207687_10057247
236 Ga0207706_10000352
237 Ga0207686_10000189
238 Ga0207670_10182950
239 Ga0207661_10019158
240 Ga0207661_10363250
241 Ga0207678_10230175
242 Ga0207702_10225487
243 Ga0265337_1001234
244 Ga0265319_1011450
245 Ga0265323_10001285
246 Ga0265336_10001753
247 Ga0265336_10035197
248 Ga0265336_10057011
249 Ga0265338_10002459
250 Ga0265338_10003214
251 Ga0265338_10008884
252 Ga0265338_10018382
253 Ga0265338_10023675
254 Ga0265338_10025679
255 Ga0265338_10063867
256 Ga0265338_10196179
257 Ga0265338_10250601
258 Ga0265324_10017344
259 Ga0265324_10025702
260 Ga0265320_10001732
261 Ga0265320_10008591
262 Ga0265320_10019918
263 Ga0265325_10056493
264 Ga0265329_10000209
265 Ga0265340_10008943
266 Ga0265327_10001305
267 Ga0265316_10003464
268 Ga0265316_10010738
269 Ga0265316_10027106
270 Ga0265316_10034211
271 Ga0265316_10127075
272 Ga0265316_10135185
273 Ga0265316_10262820
274 Ga0265314_10000480
275 Ga0265314_10018215
276 Ga0265342_10048007
277 Ga0307409_100235217
278 Ga0307416_100246421
279 Ga0307411_10158392
280 Ga0307415_100009433
281 Ga0373930_0000869
282 Ga0373930_0045752
283 Ga0373950_0001197
284 Ga0373959_0000408
285 Ga0373928_0000479
286 Ga0373929_0001301
287 Ga0373944_0000187
288 Ga0373949_0014018
289 Ga0373932_0000001
290 Ga0373945_0020756
291 Ga0373954_0105435
292 Ga0373962_0000315
293 Ga0316574_0089324
294 Ga0373931_0000008
295 Ga0373927_0046295
296 Ga0373937_0001665
297 Ga0373937_0109605
298 Ga0373937_0411784
299 Ga0316584_0164991
300 Ga0373925_0002695
301 Ga0395899_0011423
302 Ga0395898_0045980
303 Ga0395901_0017793
304 Ga0439452_024615
305 Ga0439434_0007377
306 Ga0453684_0203995
307 Ga0451576_0081048
308 Ga0451576_0217598
309 Ga0451576_0262105
310 Ga0451576_0268358
311 Ga0495629_0176590
312 Ga0495580_0134558
313 Ga0495664_0108241
314 Ga0495630_0022810
315 Ga0495630_0119842
316 Ga0495630_0219512
317 Ga0495643_0000071
318 Ga0495640_0035866
319 Ga0495640_0108684
320 Ga0495586_0017282
321 Ga0495667_0021711
322 Ga0495667_0061390
323 Ga0495667_0094350
324 Ga0495634_0002277
325 Ga0495613_0047678
326 Ga0495604_0002564
327 Ga0495604_0037586
328 Ga0495680_0097295
329 Ga0495680_0194240
330 Ga0495675_0017068
331 Ga0496106_0179720
332 Ga0496107_0052355
333 Ga0496108_0164472
334 Ga0496109_0163735
335 Ga0496110_0209493
336 Ga0501033_0068050
337 Ga0501037_0059455
338 Ga0501040_0040989
339 Ga0501041_0130274
340 Ga0501043_0143517
341 Ga0501067_0173581
342 Ga0501074_0043515
343 Ga0501075_0247547
344 Ga0501075_0421252
345 Ga0501080_0042597
346 Ga0501035_0030779
347 Ga0501035_0061352
348 nmdc:mga03n38_41102_c1
349 nmdc:mga0yw44_38558_c1
350 nmdc:mga06r32_128791_c1
351 nmdc:mga08y16_302045_c1
352 nmdc:mga08y16_63537_c1
353 nmdc:mga08y16_87839_c1
354 nmdc:mga0n895_619229_c1
355 Ga0500628_000145
356 2511178309
357 2512640107
358 2524002940
359 2857462432
360 2857468912
361 2857596436
362 2915600400
363 2915608128
364 2929185562

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00490

ALAD

Delta-aminolevulinic acid dehydratase

41

361

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
2c1h-assembly1.cif.gz_A the x-ray structure of chlorobium vibrioforme 5-aminolaevulinic acid dehydratase complexed with a diacid inhibitor 0.987 6 324
3obk-assembly1.cif.gz_H crystal structure of delta-aminolevulinic acid dehydratase (porphobilinogen synthase) from toxoplasma gondii me49 in complex with the reaction product porphobilinogen 0.9843 6 322
2c1h-assembly1.cif.gz_A the x-ray structure of chlorobium vibrioforme 5-aminolaevulinic acid dehydratase complexed with a diacid inhibitor 0.9809 6 324
1w56-assembly1.cif.gz_A stepwise introduction of zinc binding site into porphobilinogen synthase of pseudomonas aeruginosa (mutations a129c and d131c) 0.9805 2 323
1w54-assembly1.cif.gz_A stepwise introduction of a zinc binding site into porphobilinogen synthase from pseudomonas aeruginosa (mutation d139c) 0.9797 6 323
ID Description Score Start End Superfamily
af_Q60178_5_334_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9841 3 322 3.20.20.70
af_P9WMP5_2_329_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9813 2 324 3.20.20.70
1i8jA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9778 3 323 3.20.20.70
af_P9WMP5_2_329_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9753 2 324 3.20.20.70
2c19A00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9734 1 321 3.20.20.70
ID Description Score Start End GO Terms
AF-A0A849TES1-F1-model_v4 Delta-aminolevulinic acid dehydratase (EC 4.2.1.24) 1.004 232 323 GO:0004655
GO:0005829
GO:0006782
GO:0008270
AF-A0A1V4V906-F1-model_v4 Delta-aminolevulinic acid dehydratase (EC 4.2.1.24) 1 193 323 GO:0004655
GO:0005829
GO:0006782
GO:0008270
AF-A0A1W1D7K8-F1-model_v4 porphobilinogen synthase (EC 4.2.1.24) (Porphobilinogen synthase) 1 223 324 GO:0004655
GO:0005829
GO:0006782
GO:0008270
AF-A0A7V8BDZ2-F1-model_v4 Delta-aminolevulinic acid dehydratase (EC 4.2.1.24) 1 218 323 GO:0004655
GO:0005829
GO:0006782
GO:0008270
AF-A0A535MK06-F1-model_v4 Delta-aminolevulinic acid dehydratase (EC 4.2.1.24) 0.9998 233 320 GO:0004655
GO:0005829
GO:0006782
GO:0008270

Map