F278297

General Info

Members Datasets Scaffolds Average Seq Length
181 101 167 579

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|3006321560|3006323427
Length 613
Sequence SGSGGGADEPAEGGEGAQGGERQAGGPGPFEPRTLRDYALVADGERGALLGPRGEYVWMCAPRWDSGAVFSSLIGGRGGYALAPAGRYVWGGYYEDRSLIWHSRWVTQDHGVVECREALAFPGDPHRTVLLRQVLPAERPAPLRVLLEPAADFGGGPLRELRRELRQDGHGVWHGRAGGLWLRWSGAVGRARPTGGGRRLELELTARAGATYNLVLEISDRPLEDAPPDPGQAWEATSTAWREAVPELSDVLAPRDARHAYAVMRGLTGSAGGMVAAATTSLPERAEEGRNYDYRYVWVRDQCYAGQAVAAAGGYPLLDDAVRFVTARLAGDGAGLRPAYTVDGRPIPDQRRLELPGYPGGFDLVGNQVSGQFQLDAFGECLLLFAAAARHDRLDADAWRAALTAAEAVERRWREPDAGIWELAPARWTHSRLVCAAGLRALAGSGAAPARQSARWEALADAIVAATDRGGLHPSGRWQRAPGDPRTDAALLFPALRGAVPAGDPRSAATLEAYLAELTDDHFAYRFRHDDRPLAHAEGAFVMCGFVVAMAEHQRGRTAAAHRWFERNRAACGPAGLYAEEYDTAQREMRGNVPQAFVHALMLEAAARLGREW

Samples

Sample ID Description Type Environment
1 2527291627 Frankia casuarinae Thr Isolate Nodule
2 2527291629 Frankia sp. BMG5.23 Isolate Nodule
3 2546825537 Frankia sp. CcI6 Isolate Rhizoplane
4 2558860280 Kutzneria sp. 744 Isolate Unclassified
5 2576861822 Frankia sp. CeD Isolate Nodule
6 2684623036 Frankia sp. CgIM4 Isolate Nodule
7 2710264753 Frankia sp. KB5 Isolate Nodule
8 2773857924 Frankia sp. CgIS1 Isolate Nodule
9 2811994917 Streptomyces sp. SLBN-134 Isolate Unclassified
10 2858868258 Micromonospora sp. MH33 Isolate Unclassified
11 2858902515 Micromonospora sp. MW-13 Isolate Rhizosphere
12 2922554459 Rhodococcus sp. 66b Isolate Unclassified
13 3006321560 Actinacidiphila epipremni PRB2-1 Isolate Unclassified
14 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
15 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
16 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
17 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
18 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
19 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
20 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
21 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
22 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
23 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
24 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
25 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
26 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
27 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
28 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
29 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
30 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
31 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
32 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
33 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
49 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
50 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
51 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
52 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
53 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
54 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
55 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
56 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
57 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
58 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
59 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
60 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
61 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
62 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
63 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
64 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
65 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
66 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
67 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
68 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
69 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
70 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
71 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
72 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
73 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
74 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
75 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
76 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
77 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
78 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
79 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
80 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
81 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
82 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
83 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
84 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
85 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
86 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
87 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
88 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
89 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
90 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
91 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
92 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
93 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
94 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
95 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
96 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
97 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
98 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
99 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
100 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
101 637000116 Frankia casuarinae CcI3 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 91.16
Metatranscriptomes 1.1
Isolates 7.73

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 3.87
Rhizoplane 4.42
Rhizosphere 85.08
Stem 0
Stem Tuber 0
Unclassified 6.63

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070680_100000196 3300005336 Bacteria 39340
2 Ga0070709_10000364 3300005434 Bacteria 27873
3 Ga0070709_10001393 3300005434 Bacteria 13143
4 Ga0070709_10034420 3300005434 Bacteria 3071
5 Ga0070714_100000052 3300005435 Bacteria 106161
6 Ga0070714_100001932 3300005435 Bacteria 15140
7 Ga0070714_100006919 3300005435 Bacteria 8794
8 Ga0070714_100042218 3300005435 Bacteria 3852
9 Ga0070713_100000812 3300005436 Bacteria 20038
10 Ga0070713_100008360 3300005436 Bacteria 7338
11 Ga0070713_100012424 3300005436 Bacteria 6245
12 Ga0070713_100025756 3300005436 Bacteria 4605
13 Ga0070713_100091923 3300005436 Bacteria 2611
14 Ga0070710_10000495 3300005437 Bacteria 18513
15 Ga0070711_100001628 3300005439 Bacteria 12400
16 Ga0070711_100020718 3300005439 Bacteria 4242
17 Ga0070681_10000741 3300005458 Bacteria 27037
18 Ga0070681_10007536 3300005458 Bacteria 10636
19 Ga0070706_100004171 3300005467 Bacteria 14055
20 Ga0070679_100000070 3300005530 Bacteria 76125
21 Ga0070679_100053921 3300005530 Bacteria 4003
22 Ga0068856_100042335 3300005614 Bacteria 4479
23 Ga0068852_100033243 3300005616 Bacteria 4280
24 Ga0070717_10006107 3300006028 Bacteria 8847
25 Ga0070717_10006960 3300006028 Bacteria 8359
26 Ga0070717_10109783 3300006028 Bacteria 2352
27 Ga0070715_10019661 3300006163 Bacteria 2594
28 Ga0070716_100000112 3300006173 Bacteria 31826
29 Ga0070716_100016411 3300006173 Bacteria 3821
30 Ga0070712_100006628 3300006175 Bacteria 7197
31 Ga0070712_100011981 3300006175 Bacteria 5512
32 Ga0070712_100016068 3300006175 Bacteria 4829
33 Ga0070712_100063722 3300006175 Bacteria 2611
34 Ga0105238_10068289 3300009551 Bacteria 3556
35 Ga0206353_10372236 3300020082 Bacteria 5677
36 Ga0213876_10014738 3300021384 Bacteria 4142
37 Ga0224712_10009101 3300022467 Bacteria 2977
38 Ga0207692_10001935 3300025898 Bacteria 7894
39 Ga0207692_10025551 3300025898 Bacteria 2760
40 Ga0207699_10001286 3300025906 Bacteria 11920
41 Ga0207699_10005842 3300025906 Bacteria 5922
42 Ga0207699_10028795 3300025906 Bacteria 3091
43 Ga0207684_10016625 3300025910 Bacteria 6316
44 Ga0207707_10000153 3300025912 Bacteria 72436
45 Ga0207693_10002516 3300025915 Bacteria 15938
46 Ga0207693_10092125 3300025915 Bacteria 2375
47 Ga0207663_10000750 3300025916 Bacteria 14475
48 Ga0207663_10003350 3300025916 Bacteria 7826
49 Ga0207663_10005086 3300025916 Bacteria 6603
50 Ga0207663_10019736 3300025916 Bacteria 3805
51 Ga0207663_10045132 3300025916 Bacteria 2709
52 Ga0207660_10000173 3300025917 Bacteria 41028
53 Ga0207660_10110958 3300025917 Bacteria 2064
54 Ga0207652_10000221 3300025921 Bacteria 60227
55 Ga0207652_10056130 3300025921 Bacteria 3390
56 Ga0207694_10121371 3300025924 Bacteria 2087
57 Ga0207700_10001490 3300025928 Bacteria 13253
58 Ga0207700_10005304 3300025928 Bacteria 7689
59 Ga0207700_10011627 3300025928 Bacteria 5624
60 Ga0207700_10041853 3300025928 Bacteria 3354
61 Ga0207664_10000069 3300025929 Bacteria 106174
62 Ga0207664_10000313 3300025929 Bacteria 36100
63 Ga0207664_10005624 3300025929 Bacteria 8573
64 Ga0207664_10009615 3300025929 Bacteria 6793
65 Ga0207664_10013986 3300025929 Bacteria 5784
66 Ga0207665_10000128 3300025939 Bacteria 50300
67 Ga0207665_10016301 3300025939 Bacteria 4878
68 Ga0207665_10046187 3300025939 Bacteria 2918
69 Ga0207639_10090250 3300026041 Bacteria 2451
70 Ga0207674_10023067 3300026116 Bacteria 6674
71 Ga0207698_10009940 3300026142 Bacteria 6086
72 Ga0307507_10000424 3300033179 Bacteria 88095
73 Ga0373955_0007555 3300035172 Bacteria 5002
74 Ga0436364_0251295 3300037853 Bacteria 3926
75 Ga0436364_0897010 3300037853 Bacteria 3301
76 Ga0395901_0182417 3300038443 Bacteria 2202
77 Ga0436365_0983882 3300039437 Bacteria 17130
78 Ga0436365_1819469 3300039437 Bacteria 2847
79 Ga0466969_0001559 3300044656 Bacteria 12312
80 Ga0466969_0006313 3300044656 Bacteria 6306
81 Ga0466969_0009423 3300044656 Bacteria 5176
82 Ga0466966_0070110 3300044684 Bacteria 2198
83 Ga0466961_0001355 3300044693 Bacteria 15096
84 Ga0466961_0004012 3300044693 Bacteria 9219
85 Ga0466961_0063971 3300044693 Bacteria 2338
86 Ga0466963_0000170 3300044694 Bacteria 26709
87 Ga0466963_0001873 3300044694 Bacteria 11471
88 Ga0466963_0005639 3300044694 Bacteria 7348
89 Ga0466963_0018569 3300044694 Bacteria 4350
90 Ga0466971_0019029 3300044719 Bacteria 3047
91 Ga0466971_0029759 3300044719 Bacteria 2443
92 Ga0466968_0026699 3300044735 Bacteria 2371
93 Ga0466970_0004521 3300044765 Bacteria 6862
94 Ga0466957_0002378 3300044842 Bacteria 10102
95 Ga0466957_0009492 3300044842 Bacteria 5556
96 Ga0466957_0014400 3300044842 Bacteria 4605
97 Ga0466959_0001409 3300045049 Bacteria 14692
98 Ga0466959_0122241 3300045049 Bacteria 1850
99 Ga0466958_0026494 3300045836 Bacteria 3426
100 Ga0466958_0115341 3300045836 Bacteria 1679
101 Ga0466967_0000279 3300045976 Bacteria 22606
102 Ga0466967_0004004 3300045976 Bacteria 9820
103 Ga0466967_0012433 3300045976 Bacteria 6510
104 Ga0466967_0013971 3300045976 Bacteria 6232
105 Ga0466967_0051207 3300045976 Bacteria 3618
106 Ga0466967_0073899 3300045976 Bacteria 3060
107 Ga0495629_0018360 3300046459 Bacteria 5007
108 Ga0495634_0099555 3300046642 Bacteria 1879
109 Ga0495604_0036439 3300047317 Bacteria 3878
110 Ga0495676_0000878 3300047321 Bacteria 25093
111 Ga0495675_0024460 3300047444 Bacteria 3850
112 Ga0496104_0022074 3300048907 Bacteria 5849
113 Ga0496104_0054062 3300048907 Bacteria 3795
114 Ga0496105_0000661 3300048908 Bacteria 23132
115 Ga0496105_0092754 3300048908 Bacteria 2493
116 Ga0496112_0000328 3300048915 Bacteria 30672
117 Ga0496113_0045882 3300048916 Bacteria 3243
118 Ga0496115_0007134 3300048918 Bacteria 8205
119 Ga0496119_0000144 3300048922 Bacteria 99370
120 Ga0501031_0012289 3300049568 Bacteria 5581
121 Ga0501032_0000385 3300049569 Bacteria 36381
122 Ga0501032_0015584 3300049569 Bacteria 5362
123 Ga0501032_0016027 3300049569 Bacteria 5277
124 Ga0501034_0001460 3300049571 Bacteria 31287
125 Ga0501034_0066475 3300049571 Bacteria 3618
126 Ga0501036_0000298 3300049572 Bacteria 34478
127 Ga0501036_0002447 3300049572 Bacteria 14543
128 Ga0501036_0007230 3300049572 Bacteria 9040
129 Ga0501037_0000405 3300049573 Bacteria 36045
130 Ga0501037_0008486 3300049573 Bacteria 7531
131 Ga0501037_0019056 3300049573 Bacteria 5059
132 Ga0501038_0005026 3300049574 Bacteria 12284
133 Ga0501038_0026587 3300049574 Bacteria 5154
134 Ga0501039_0010552 3300049575 Bacteria 7041
135 Ga0501039_0025734 3300049575 Bacteria 4522
136 Ga0501041_0000189 3300049577 Bacteria 28141
137 Ga0501043_0000994 3300049579 Bacteria 24974
138 Ga0501043_0011127 3300049579 Bacteria 7048
139 Ga0501043_0089348 3300049579 Bacteria 2421
140 Ga0501046_0028605 3300049580 Bacteria 4538
141 Ga0501047_0000431 3300049581 Bacteria 46585
142 Ga0501047_0006626 3300049581 Bacteria 10889
143 Ga0501047_0010297 3300049581 Bacteria 8842
144 Ga0501047_0030084 3300049581 Bacteria 5236
145 Ga0501048_0001034 3300049582 Bacteria 20835
146 Ga0501067_0037859 3300049583 Bacteria 2678
147 Ga0501068_0007487 3300049584 Bacteria 6042
148 Ga0501070_0033991 3300049586 Bacteria 4265
149 Ga0501070_0058628 3300049586 Bacteria 3191
150 Ga0501071_0000466 3300049587 Bacteria 20445
151 Ga0501072_0051081 3300049588 Bacteria 3256
152 Ga0501073_0010110 3300049589 Bacteria 6935
153 Ga0501074_0004193 3300049590 Bacteria 10297
154 Ga0501074_0019446 3300049590 Bacteria 4932
155 Ga0501077_0002092 3300049593 Bacteria 12037
156 Ga0501080_0041550 3300049742 Bacteria 4283
157 Ga0501083_0000673 3300049744 Bacteria 22193
158 Ga0501035_0000698 3300049822 Bacteria 36582
159 Ga0501035_0002149 3300049822 Bacteria 19584
160 Ga0501035_0005565 3300049822 Bacteria 11904
161 Ga0501044_0000902 3300049823 Bacteria 35866
162 Ga0501044_0014172 3300049823 Bacteria 8608
163 Ga0501044_0042355 3300049823 Bacteria 4736
164 Ga0501044_0067576 3300049823 Bacteria 3641
165 Ga0501045_0030034 3300049824 Bacteria 3931
166 Ga0466962_0002746 3300061719 Bacteria 8363
167 Ga0466962_0041822 3300061719 Bacteria 2193

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300038443 Ga0395901_0182417 Ga0395901_0182417_66_1511 468
2 3300045836 Ga0466958_0115341 Ga0466958_0115341_45_1667 528
3 3300047321 Ga0495676_0000878 Ga0495676_0000878_55_1713 529
4 iso_pu_bacteria 2858868258 2858874421 529
5 3300047444 Ga0495675_0024460 Ga0495675_0024460_1081_2862 531
6 3300049572 Ga0501036_0000298 Ga0501036_0000298_6776_8572 533
7 3300049574 Ga0501038_0026587 Ga0501038_0026587_1093_2889 533
8 3300049581 Ga0501047_0006626 Ga0501047_0006626_3057_4853 533
9 3300049582 Ga0501048_0001034 Ga0501048_0001034_553_2349 533
10 3300049590 Ga0501074_0004193 Ga0501074_0004193_5912_7708 533
11 3300049823 Ga0501044_0042355 Ga0501044_0042355_592_2388 533
12 3300048908 Ga0496105_0092754 Ga0496105_0092754_701_2470 534
13 3300047317 Ga0495604_0036439 Ga0495604_0036439_297_2066 542
14 3300049568 Ga0501031_0012289 Ga0501031_0012289_2690_4372 542
15 3300049569 Ga0501032_0000385 Ga0501032_0000385_2826_4508 542
16 3300049571 Ga0501034_0001460 Ga0501034_0001460_9258_10931 542
17 3300049572 Ga0501036_0002447 Ga0501036_0002447_72_1754 542
18 3300049573 Ga0501037_0000405 Ga0501037_0000405_31683_33356 542
19 3300049575 Ga0501039_0025734 Ga0501039_0025734_24_1697 542
20 3300049577 Ga0501041_0000189 Ga0501041_0000189_9366_11057 542
21 3300049579 Ga0501043_0000994 Ga0501043_0000994_2970_4652 542
22 3300049581 Ga0501047_0010297 Ga0501047_0010297_5313_6995 542
23 3300049583 Ga0501067_0037859 Ga0501067_0037859_24_1697 542
24 3300049584 Ga0501068_0007487 Ga0501068_0007487_3160_4833 542
25 3300049586 Ga0501070_0058628 Ga0501070_0058628_309_1982 542
26 3300049587 Ga0501071_0000466 Ga0501071_0000466_10760_12433 542
27 3300049588 Ga0501072_0051081 Ga0501072_0051081_995_2695 542
28 3300049589 Ga0501073_0010110 Ga0501073_0010110_5179_6852 542
29 3300049590 Ga0501074_0019446 Ga0501074_0019446_2092_3765 542
30 3300049593 Ga0501077_0002092 Ga0501077_0002092_1535_3208 542
31 3300049742 Ga0501080_0041550 Ga0501080_0041550_481_2154 542
32 3300049744 Ga0501083_0000673 Ga0501083_0000673_20212_21885 542
33 3300049822 Ga0501035_0000698 Ga0501035_0000698_2736_4418 542
34 3300049823 Ga0501044_0000902 Ga0501044_0000902_31495_33177 542
35 3300049824 Ga0501045_0030034 Ga0501045_0030034_1168_2850 542
36 3300025924 Ga0207694_10121371 Ga0207694_101213711 543
37 3300035172 Ga0373955_0007555 Ga0373955_0007555_2025_3821 543
38 3300005434 Ga0070709_10034420 Ga0070709_100344203 544
39 3300005436 Ga0070713_100091923 Ga0070713_1000919231 544
40 3300006163 Ga0070715_10019661 Ga0070715_100196613 544
41 3300006175 Ga0070712_100063722 Ga0070712_1000637223 544
42 3300025898 Ga0207692_10001935 Ga0207692_100019354 544
43 3300025906 Ga0207699_10028795 Ga0207699_100287952 544
44 3300025915 Ga0207693_10092125 Ga0207693_100921252 544
45 3300025916 Ga0207663_10005086 Ga0207663_100050862 544
46 3300025928 Ga0207700_10041853 Ga0207700_100418532 544
47 3300025929 Ga0207664_10009615 Ga0207664_100096155 544
48 3300025939 Ga0207665_10046187 Ga0207665_100461872 544
49 3300048907 Ga0496104_0054062 Ga0496104_0054062_786_2594 544
50 3300021384 Ga0213876_10014738 Ga0213876_100147382 546
51 3300039437 Ga0436365_0983882 Ga0436365_0983882_1953_3785 546
52 3300022467 Ga0224712_10009101 Ga0224712_100091011 554
53 3300044656 Ga0466969_0001559 Ga0466969_0001559_6559_8262 554
54 3300044693 Ga0466961_0001355 Ga0466961_0001355_2151_3854 554
55 3300044765 Ga0466970_0004521 Ga0466970_0004521_1356_3059 554
56 3300045049 Ga0466959_0001409 Ga0466959_0001409_6643_8346 554
57 3300061719 Ga0466962_0041822 Ga0466962_0041822_403_2106 554
58 3300045976 Ga0466967_0000279 Ga0466967_0000279_20714_22504 555
59 3300005467 Ga0070706_100004171 Ga0070706_10000417111 556
60 3300025910 Ga0207684_10016625 Ga0207684_100166253 556
61 3300049580 Ga0501046_0028605 Ga0501046_0028605_2618_4468 560
62 3300009551 Ga0105238_10068289 Ga0105238_100682892 561
63 3300026041 Ga0207639_10090250 Ga0207639_100902501 561
64 3300037853 Ga0436364_0251295 Ga0436364_0251295_2101_3861 562
65 3300046459 Ga0495629_0018360 Ga0495629_0018360_2631_4406 562
66 3300046642 Ga0495634_0099555 Ga0495634_0099555_13_1827 562
67 3300045976 Ga0466967_0051207 Ga0466967_0051207_1801_3570 564
68 3300025917 Ga0207660_10110958 Ga0207660_101109582 565
69 iso_pu_bacteria 2558860280 2559423543 565
70 3300044735 Ga0466968_0026699 Ga0466968_0026699_34_1809 566
71 3300049581 Ga0501047_0030084 Ga0501047_0030084_1745_3508 566
72 3300005434 Ga0070709_10001393 Ga0070709_1000139312 568
73 3300005435 Ga0070714_100001932 Ga0070714_1000019324 568
74 3300005436 Ga0070713_100008360 Ga0070713_1000083607 568
75 3300005436 Ga0070713_100012424 Ga0070713_1000124244 568
76 3300005614 Ga0068856_100042335 Ga0068856_1000423352 568
77 3300006028 Ga0070717_10006960 Ga0070717_100069606 568
78 3300006173 Ga0070716_100016411 Ga0070716_1000164114 568
79 3300006175 Ga0070712_100011981 Ga0070712_1000119813 568
80 3300025898 Ga0207692_10025551 Ga0207692_100255512 568
81 3300025906 Ga0207699_10005842 Ga0207699_100058426 568
82 3300025916 Ga0207663_10003350 Ga0207663_100033504 568
83 3300025916 Ga0207663_10045132 Ga0207663_100451321 568
84 3300025928 Ga0207700_10005304 Ga0207700_100053044 568
85 3300025929 Ga0207664_10005624 Ga0207664_100056244 568
86 3300025939 Ga0207665_10016301 Ga0207665_100163012 568
87 3300048907 Ga0496104_0022074 Ga0496104_0022074_3955_5739 568
88 3300048908 Ga0496105_0000661 Ga0496105_0000661_9042_10826 568
89 3300048915 Ga0496112_0000328 Ga0496112_0000328_4877_6661 568
90 3300048916 Ga0496113_0045882 Ga0496113_0045882_770_2554 568
91 3300048918 Ga0496115_0007134 Ga0496115_0007134_4428_6212 568
92 3300005439 Ga0070711_100020718 Ga0070711_1000207183 569
93 3300006175 Ga0070712_100016068 Ga0070712_1000160682 569
94 3300025916 Ga0207663_10019736 Ga0207663_100197363 569
95 3300044694 Ga0466963_0000170 Ga0466963_0000170_23436_25181 569
96 3300045976 Ga0466967_0012433 Ga0466967_0012433_2139_3884 569
97 3300039437 Ga0436365_1819469 Ga0436365_1819469_971_2824 570
98 3300044842 Ga0466957_0002378 Ga0466957_0002378_7498_9288 570
99 3300045836 Ga0466958_0026494 Ga0466958_0026494_1304_3094 570
100 3300045976 Ga0466967_0004004 Ga0466967_0004004_1173_2963 570
101 iso_pu_bacteria 2858902515 2858908491 570
102 3300005435 Ga0070714_100042218 Ga0070714_1000422182 571
103 3300006028 Ga0070717_10109783 Ga0070717_101097832 571
104 3300025929 Ga0207664_10013986 Ga0207664_100139866 571
105 3300049822 Ga0501035_0005565 Ga0501035_0005565_6848_8647 573
106 3300005434 Ga0070709_10000364 Ga0070709_1000036413 574
107 3300005435 Ga0070714_100006919 Ga0070714_1000069195 574
108 3300005436 Ga0070713_100000812 Ga0070713_1000008127 574
109 3300005436 Ga0070713_100025756 Ga0070713_1000257562 574
110 3300005437 Ga0070710_10000495 Ga0070710_1000049510 574
111 3300005439 Ga0070711_100001628 Ga0070711_1000016288 574
112 3300006028 Ga0070717_10006107 Ga0070717_100061078 574
113 3300006173 Ga0070716_100000112 Ga0070716_10000011216 574
114 3300006175 Ga0070712_100006628 Ga0070712_1000066286 574
115 3300025906 Ga0207699_10001286 Ga0207699_100012867 574
116 3300025915 Ga0207693_10002516 Ga0207693_1000251613 574
117 3300025916 Ga0207663_10000750 Ga0207663_100007509 574
118 3300025928 Ga0207700_10001490 Ga0207700_100014907 574
119 3300025928 Ga0207700_10011627 Ga0207700_100116274 574
120 3300025929 Ga0207664_10000313 Ga0207664_1000031328 574
121 3300025939 Ga0207665_10000128 Ga0207665_1000012833 574
122 3300049569 Ga0501032_0016027 Ga0501032_0016027_2579_4519 574
123 iso_pu_bacteria 2527291627 2528205836 575
124 iso_pu_bacteria 2527291629 2528215397 575
125 iso_pu_bacteria 2546825537 2546950656 575
126 iso_pu_bacteria 2576861822 2579750572 575
127 iso_pu_bacteria 2684623036 2686543864 575
128 iso_pu_bacteria 2710264753 2710605386 575
129 iso_pu_bacteria 2773857924 2774866592 575
130 iso_pu_bacteria 637000116 637879824 575
131 3300033179 Ga0307507_10000424 Ga0307507_1000042478 576
132 3300037853 Ga0436364_0897010 Ga0436364_0897010_229_2025 576
133 3300044656 Ga0466969_0006313 Ga0466969_0006313_2503_4320 576
134 3300049573 Ga0501037_0008486 Ga0501037_0008486_964_2781 576
135 3300049581 Ga0501047_0000431 Ga0501047_0000431_29505_31322 576
136 iso_pu_bacteria 2811994917 2812482921 576
137 3300005435 Ga0070714_100000052 Ga0070714_10000005297 577
138 3300005616 Ga0068852_100033243 Ga0068852_1000332434 577
139 3300025929 Ga0207664_10000069 Ga0207664_100000697 577
140 3300026116 Ga0207674_10023067 Ga0207674_100230676 577
141 3300026142 Ga0207698_10009940 Ga0207698_100099404 577
142 3300044656 Ga0466969_0009423 Ga0466969_0009423_2930_4675 577
143 3300044693 Ga0466961_0004012 Ga0466961_0004012_234_2024 577
144 3300044694 Ga0466963_0001873 Ga0466963_0001873_4387_6177 577
145 3300044694 Ga0466963_0005639 Ga0466963_0005639_3169_4944 577
146 3300044719 Ga0466971_0019029 Ga0466971_0019029_1056_2846 577
147 3300044719 Ga0466971_0029759 Ga0466971_0029759_152_1885 577
148 3300044842 Ga0466957_0009492 Ga0466957_0009492_2064_3797 577
149 3300044842 Ga0466957_0014400 Ga0466957_0014400_2540_4315 577
150 3300045976 Ga0466967_0013971 Ga0466967_0013971_1915_3690 577
151 3300045976 Ga0466967_0073899 Ga0466967_0073899_347_2116 577
152 3300048922 Ga0496119_0000144 Ga0496119_0000144_74348_76144 577
153 3300049569 Ga0501032_0015584 Ga0501032_0015584_1554_3359 577
154 3300049571 Ga0501034_0066475 Ga0501034_0066475_1808_3601 577
155 3300049572 Ga0501036_0007230 Ga0501036_0007230_2735_4549 577
156 3300049573 Ga0501037_0019056 Ga0501037_0019056_1953_3767 577
157 3300049574 Ga0501038_0005026 Ga0501038_0005026_2918_4858 577
158 3300049575 Ga0501039_0010552 Ga0501039_0010552_1111_2925 577
159 3300049579 Ga0501043_0011127 Ga0501043_0011127_806_2620 577
160 3300049579 Ga0501043_0089348 Ga0501043_0089348_21_1814 577
161 3300049586 Ga0501070_0033991 Ga0501070_0033991_636_2450 577
162 3300049822 Ga0501035_0002149 Ga0501035_0002149_15776_17581 577
163 3300049823 Ga0501044_0014172 Ga0501044_0014172_4800_6605 577
164 3300049823 Ga0501044_0067576 Ga0501044_0067576_379_2193 577
165 3300061719 Ga0466962_0002746 Ga0466962_0002746_4737_6512 577
166 iso_pu_bacteria 3006321560 3006323427 577
167 iso_pu_bacteria 2922554459 2922557882 578
168 3300005336 Ga0070680_100000196 Ga0070680_1000001963 579
169 3300005458 Ga0070681_10000741 Ga0070681_1000074118 579
170 3300005458 Ga0070681_10007536 Ga0070681_100075362 579
171 3300005530 Ga0070679_100000070 Ga0070679_10000007068 579
172 3300005530 Ga0070679_100053921 Ga0070679_1000539212 579
173 3300020082 Ga0206353_10372236 Ga0206353_103722363 579
174 3300025912 Ga0207707_10000153 Ga0207707_100001535 579
175 3300025917 Ga0207660_10000173 Ga0207660_1000017334 579
176 3300025921 Ga0207652_10000221 Ga0207652_100002215 579
177 3300025921 Ga0207652_10056130 Ga0207652_100561302 579
178 3300044684 Ga0466966_0070110 Ga0466966_0070110_228_1976 579
179 3300044693 Ga0466961_0063971 Ga0466961_0063971_504_2246 579
180 3300044694 Ga0466963_0018569 Ga0466963_0018569_1360_3117 579
181 3300045049 Ga0466959_0122241 Ga0466959_0122241_20_1762 579

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00723

Glyco_hydro_15

Glycosyl hydrolases family 15

258

607

0.92

PF19291

TREH_N

Trehalase-like, N-terminal

30

183

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
5hop-assembly1.cif.gz_B 1.65 angstrom resolution crystal structure of lmo0182 (residues 1-245) from listeria monocytogenes egd-e 0.8547 344 575
5z3c-assembly1.cif.gz_A glycosidase e178a 0.7773 225 577
5z3b-assembly1.cif.gz_A glycosidase y48f 0.776 225 577
5z3d-assembly1.cif.gz_A glycosidase f290y 0.7716 225 577
5z3a-assembly1.cif.gz_A glycosidase wild type 0.7689 225 577
ID Description Score Start End Superfamily
af_Q552D2_275_646_1.50.10.10 Mainly Alpha;Alpha/alpha barrel;Glycosyltransferase; 0.9137 225 574 1.50.10.10
af_P71741_292_669_1.50.10.10 Mainly Alpha;Alpha/alpha barrel;Glycosyltransferase; 0.908 225 577 1.50.10.10
af_Q10211_257_646_1.50.10.10 Mainly Alpha;Alpha/alpha barrel;Glycosyltransferase; 0.9034 225 577 1.50.10.10
af_Q550P8_46_420_1.50.10.10 Mainly Alpha;Alpha/alpha barrel;Glycosyltransferase; 0.8645 40 379 1.50.10.10
af_Q552D2_275_646_1.50.10.10 Mainly Alpha;Alpha/alpha barrel;Glycosyltransferase; 0.8597 225 574 1.50.10.10
ID Description Score Start End GO Terms
AF-A0A6B2V719-F1-model_v4 Glycoside hydrolase family 15 protein 0.9903 454 579 GO:0005993
GO:0015927
AF-A0A1G9BVD3-F1-model_v4 Glycosyl hydrolases family 15 0.989 354 579 GO:0005993
GO:0015927
AF-A0A7Z0SY32-F1-model_v4 Glycoside hydrolase family 15 protein 0.9876 8 577 GO:0005993
GO:0015927
AF-A0A7Z0IIR6-F1-model_v4 GH15 family glucan-1,4-alpha-glucosidase 0.9871 1 577 GO:0005993
GO:0015927
AF-A0A2W6DUR7-F1-model_v4 Glycoside hydrolase 0.9867 4 537 GO:0005993
GO:0015927

Feature Viewer

pLDDT pTM Quality
92.95 0.94 High
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Predicted Structure (AlphaFold2)

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