F278288

General Info

Members Datasets Scaffolds Average Seq Length
181 142 362 501

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2954002825|2954004933
Length 547
Sequence AGVLVAAGAVGVSVAFWPAADAGSGTDLGATAASSGVTRPSEAAGAASSAPSAGSRTPSPTAPAPSPARVYPLSKTPRTIPAVREHVPARGPGWRPASTARVVVTGAGLADEGKLLAGELRMAYGGTVAPRAGDVQLALDPGQAAKGPESYTLTVSKRRVTIAAPAEAGVFYGTRTLKQEVAGGGTASEGVVRDRPAKPQRGLSLDTARKHFPASWIEDRVRELGDLKFNELDLHFSDDQGFRIASDTHPEIVSRDHLTKAEVRRIVALAASRHITVVPEIDSPGHLGAVLAAHPELQLTNAQGTPVPGALDISKPGAAKIVDDLLGEYADLFPGASWHLGGDEYRALAVANPAVSYPQLAAAAIARYGAGARVSDLATGWLGDRAATVRAHGRTAVRAWNDGFYLSSSVQADKNIQVAYWTGKEIGARQPAGYLSAGRKVVNYNDNYLYYVLGQPNQFFYPTGERIYKQWTPRVLRGTTAVSSAYDSQILGGVFAVWCDLANAQTQKQVAAGIRMPLRATVQKLWDPRAQPSLSWTDFKKLANRLG

Samples

Sample ID Description Type Environment
1 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
4 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
5 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
6 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
7 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
8 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
9 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
10 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
11 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
12 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
13 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
14 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
15 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
16 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
17 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
18 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
19 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
20 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
21 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
22 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
23 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
24 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
25 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
26 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
27 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
28 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
29 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
30 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
31 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
32 3300042145 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 Metagenome Rhizosphere
33 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
34 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
35 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
36 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
37 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
38 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
39 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
40 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
41 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
42 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
43 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
44 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
45 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
46 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
47 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
48 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
49 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
50 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
51 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
52 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
53 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
54 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
55 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
56 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
57 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
58 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
59 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
60 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
61 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
62 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
63 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
64 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
65 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
66 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
67 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
68 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
69 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
70 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
71 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
72 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
73 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
74 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
75 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
76 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
77 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
78 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
79 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
80 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
81 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
82 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
83 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
84 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
85 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
86 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
87 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
88 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
89 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
90 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
91 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
92 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
93 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
94 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
95 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
96 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
97 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
98 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
99 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
100 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
101 2954002825 Streptomyces turgidiscabies W2I16 Isolate Rhizosphere
102 2547132111 Streptomyces sp. TOR3209 Isolate Rhizosphere
103 2616644814 Streptomyces mirabilis OK461 Isolate Rhizosphere
104 2616644941 Streptomyces atratus OK807 Isolate Rhizosphere
105 2643221578 Streptomyces sp. Root63 Isolate Unclassified
106 2643221673 Streptomyces sp. Root1295 Isolate Unclassified
107 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
108 2643221714 Streptomyces sp. Root264 Isolate Unclassified
109 2784132148 Streptomyces sp. E5N91 SAI-083 Isolate Unclassified
110 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
111 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
112 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
113 2808606448 Streptomyces sp. 193411 Isolate Unclassified
114 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
115 2811994917 Streptomyces sp. SLBN-134 Isolate Unclassified
116 2818991463 Streptomyces argenteolus 3259 Isolate Rhizosphere
117 2862382967 Streptomyces scabiei NRRL B-2795 Isolate Nodule
118 2862507626 Streptomyces sp. NWU339 Isolate Unclassified
119 2862574272 Streptomyces sp. AcE210 Isolate Nodule
120 2867428634 Streptomyces sp. RP5T Isolate Unclassified
121 2875391855 Streptomyces cavourensis 1AS2a Isolate Rhizosphere
122 2912715099 Streptomyces sp. Z423-1 Isolate Rhizosphere
123 2912723979 Streptomyces sp. NEAU-sy36 Isolate Rhizosphere
124 2919468124 Streptomyces sp. 3330 Isolate Rhizosphere
125 2946045630 Streptomyces sp. W4I9-2 Isolate Rhizosphere
126 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
127 2946072368 Streptomyces achromogenes W4I19-2 Isolate Rhizosphere
128 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
129 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
130 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
131 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
132 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
133 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
134 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
135 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
136 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
137 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
138 3006486233 Streptomyces sp. BR123 Isolate Rhizosphere
139 3006493962 Streptomyces grisecoloratus TRM S81-3 Isolate Rhizosphere
140 8023623736 Streptomyces sp. 111WW2 Isolate Unclassified
141 8048406513 Streptomyces heilongjiangensis NEAU-W2 Isolate Unclassified
142 8056829672 Streptomyces barringtoniae JA03 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 76.8
Metatranscriptomes 0
Isolates 23.2

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.76
Nodule 1.1
Rhizoplane 1.1
Rhizosphere 76.8
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10011211 3300003316 Bacteria 4420
2 rootH1_10018135 3300003316 Bacteria 3606
3 rootH2_10092493 3300003320 Bacteria 2667
4 rootH2_10092494 3300003320 Bacteria 2924
5 rootH1_10047604 3300003323 Bacteria 3936
6 rootH1_10050304 3300003323 Bacteria 2742
7 rootH1_10050305 3300003323 Bacteria 3676
8 Ga0075368_10031465 3300006042 Bacteria 2058
9 Ga0075367_10000592 3300006178 Bacteria 13919
10 Ga0105251_10023960 3300009011 Bacteria 3141
11 Ga0105245_10122236 3300009098 Bacteria 2433
12 Ga0105246_10014438 3300011119 Bacteria 4967
13 Ga0182007_10000822 3300015262 Bacteria 17292
14 Ga0183367_1002 3300015688 Bacteria 1101531
15 Ga0207647_10007709 3300025904 Bacteria 7749
16 Ga0207639_10012770 3300026041 Bacteria 5859
17 Ga0209813_10010065 3300027866 Bacteria 2435
18 Ga0307517_10007699 3300028786 Bacteria 15648
19 Ga0307515_10000497 3300028794 Bacteria 94190
20 Ga0307515_10091267 3300028794 Bacteria 3808
21 Ga0307511_10043633 3300030521 Bacteria 3742
22 Ga0307512_10005779 3300030522 Bacteria 12751
23 Ga0307513_10010529 3300031456 Bacteria 11575
24 Ga0307509_10011503 3300031507 Bacteria 10700
25 Ga0307509_10048064 3300031507 Bacteria 4585
26 Ga0307508_10004630 3300031616 Bacteria 13355
27 Ga0307516_10003058 3300031730 Bacteria 21831
28 Ga0307410_10098450 3300031852 Bacteria 2092
29 Ga0307510_10058381 3300033180 Bacteria 3995
30 Ga0395900_0118927 3300037418 Bacteria 2712
31 Ga0395900_0262046 3300037418 Bacteria 1726
32 Ga0395898_0029287 3300037466 Bacteria 5517
33 Ga0395898_0094736 3300037466 Bacteria 2869
34 Ga0395901_0114903 3300038443 Bacteria 2827
35 Ga0439436_0001956 3300041404 Bacteria 6101
36 Ga0439436_0010167 3300041404 Bacteria 2873
37 Ga0439433_0001037 3300041999 Bacteria 5632
38 Ga0439449_0002149 3300042007 Bacteria 7740
39 Ga0439457_001659 3300042014 Bacteria 6611
40 Ga0450903_000168 3300042138 Bacteria 14356
41 Ga0450906_001013 3300042145 Bacteria 6172
42 Ga0466961_0001187 3300044693 Bacteria 16059
43 Ga0466961_0015138 3300044693 Bacteria 4951
44 Ga0466963_0000226 3300044694 Bacteria 24096
45 Ga0466963_0009262 3300044694 Bacteria 5930
46 Ga0466964_0010850 3300044706 Bacteria 3441
47 Ga0466970_0003063 3300044765 Bacteria 8116
48 Ga0466970_0007932 3300044765 Bacteria 5332
49 Ga0466957_0007765 3300044842 Bacteria 6072
50 Ga0466959_0003039 3300045049 Bacteria 10848
51 Ga0466958_0003109 3300045836 Bacteria 8526
52 Ga0466967_0065188 3300045976 Bacteria 3241
53 Ga0495592_0010626 3300046454 Bacteria 6941
54 Ga0495603_0003400 3300046455 Bacteria 9475
55 Ga0495603_0044044 3300046455 Bacteria 2663
56 Ga0495603_0058419 3300046455 Bacteria 2280
57 Ga0495629_0010131 3300046459 Bacteria 6874
58 Ga0495629_0029311 3300046459 Bacteria 3904
59 Ga0495629_0035763 3300046459 Bacteria 3508
60 Ga0495629_0098077 3300046459 Bacteria 2044
61 Ga0495651_0001724 3300046462 Bacteria 16876
62 Ga0495580_0048090 3300046472 Bacteria 3023
63 Ga0495605_0002633 3300046474 Bacteria 11011
64 Ga0495662_0002264 3300046476 Bacteria 9699
65 Ga0495662_0010948 3300046476 Bacteria 4436
66 Ga0495664_0012765 3300046477 Bacteria 4759
67 Ga0495584_0100970 3300046491 Bacteria 1458
68 Ga0495594_0026079 3300046499 Bacteria 3143
69 Ga0495594_0028576 3300046499 Bacteria 3010
70 Ga0495607_0058909 3300046501 Bacteria 2193
71 Ga0495606_0006416 3300046507 Bacteria 10850
72 Ga0495618_0071231 3300046514 Bacteria 2211
73 Ga0495620_0002248 3300046515 Bacteria 11189
74 Ga0495620_0005990 3300046515 Bacteria 6734
75 Ga0495643_0028261 3300046522 Bacteria 3145
76 Ga0495648_0014514 3300046524 Bacteria 5764
77 Ga0495652_0022380 3300046529 Bacteria 5607
78 Ga0495587_0005704 3300046536 Bacteria 8112
79 Ga0495645_0010041 3300046543 Bacteria 6631
80 Ga0495622_0003632 3300046557 Bacteria 7243
81 Ga0495633_0009508 3300046558 Bacteria 5363
82 Ga0495668_0014840 3300046616 Bacteria 4559
83 Ga0495634_0011255 3300046642 Bacteria 6518
84 Ga0495634_0044545 3300046642 Bacteria 3002
85 Ga0495625_0045142 3300046660 Bacteria 3187
86 Ga0495635_0005226 3300046663 Bacteria 9030
87 Ga0495588_0006667 3300046674 Bacteria 5214
88 Ga0495588_0011944 3300046674 Bacteria 4091
89 Ga0495588_0072604 3300046674 Bacteria 1790
90 Ga0495657_0003659 3300046675 Bacteria 12477
91 Ga0495657_0026000 3300046675 Bacteria 4151
92 Ga0495657_0044077 3300046675 Bacteria 3037
93 Ga0495646_0004894 3300046680 Bacteria 8462
94 Ga0495613_0040161 3300046689 Bacteria 3468
95 Ga0495613_0049409 3300046689 Bacteria 3104
96 Ga0495624_0012261 3300046690 Bacteria 5867
97 Ga0495671_0007169 3300046692 Bacteria 6380
98 Ga0495649_0018564 3300046694 Bacteria 3911
99 Ga0495649_0033121 3300046694 Bacteria 2844
100 Ga0495589_0026352 3300046794 Bacteria 2945
101 Ga0495589_0038568 3300046794 Bacteria 2390
102 Ga0495581_0005662 3300047315 Bacteria 7246
103 Ga0495581_0015915 3300047315 Bacteria 4370
104 Ga0495604_0000264 3300047317 Bacteria 46714
105 Ga0495604_0037457 3300047317 Bacteria 3819
106 Ga0495636_0008478 3300047318 Bacteria 4056
107 Ga0495676_0010262 3300047321 Bacteria 8499
108 Ga0495676_0015372 3300047321 Bacteria 6815
109 Ga0495680_0005909 3300047322 Bacteria 11444
110 Ga0495687_014211 3300047443 Bacteria 4111
111 Ga0495675_0008712 3300047444 Bacteria 6295
112 Ga0495685_013473 3300047447 Bacteria 2776
113 Ga0495685_028124 3300047447 Bacteria 1934
114 Ga0495681_0007407 3300047470 Bacteria 7018
115 Ga0495593_0010508 3300047673 Bacteria 5342
116 Ga0495602_0013989 3300048088 Bacteria 8169
117 Ga0496108_0277806 3300048911 Bacteria 1458
118 Ga0496109_0012207 3300048912 Bacteria 7412
119 Ga0501031_0028866 3300049568 Bacteria 3616
120 Ga0501033_0053914 3300049570 Bacteria 2976
121 Ga0501038_0015732 3300049574 Bacteria 6875
122 Ga0501043_0029820 3300049579 Bacteria 4286
123 Ga0501043_0071646 3300049579 Bacteria 2721
124 Ga0501047_0007067 3300049581 Bacteria 10541
125 Ga0501047_0026667 3300049581 Bacteria 5561
126 Ga0501047_0043355 3300049581 Bacteria 4346
127 Ga0501047_0286400 3300049581 Bacteria 1491
128 Ga0501048_0002650 3300049582 Bacteria 13674
129 Ga0501070_0000919 3300049586 Bacteria 26675
130 Ga0501074_0000869 3300049590 Bacteria 19255
131 Ga0501035_0008572 3300049822 Bacteria 9516
132 Ga0501035_0096682 3300049822 Bacteria 2594
133 Ga0501035_0176267 3300049822 Bacteria 1844
134 Ga0501044_0051973 3300049823 Bacteria 4225
135 Ga0501044_0266644 3300049823 Bacteria 1649
136 nmdc:mga04h51_14483_c1 3300050495 Bacteria 2254
137 Ga0495619_0082546 3300053085 Bacteria 2166
138 Ga0500640_002145 3300053095 Bacteria 6399
139 Ga0466962_0000820 3300061719 Bacteria 13990
140 2954004933 2954002825 Bacteria 9173742
141 2547411828 2547132111 Bacteria 8013147
142 2616696584 2616644814 Bacteria 11555299
143 2616903095 2616644941 Bacteria 8510691
144 2643903100 2643221578 Bacteria 9213798
145 2644404390 2643221673 Bacteria 9196637
146 2644439523 2643221678 Bacteria 9540101
147 2644633111 2643221714 Bacteria 9015452
148 2784589902 2784132148 Bacteria 8627943
149 2786672152 2786546132 Bacteria 10419719
150 2808843526 2808606359 Bacteria 9866990
151 2808913096 2808606375 Bacteria 9466072
152 2809233571 2808606448 Bacteria 8656184
153 2812356515 2811994879 Bacteria 9313447
154 2812479255 2811994917 Bacteria 7761064
155 2819695092 2818991463 Bacteria 7948711
156 2862384201 2862382967 Bacteria 10317375
157 2862512044 2862507626 Bacteria 9425308
158 2862578006 2862574272 Bacteria 10567477
159 2867437013 2867428634 Bacteria 9590268
160 2875396186 2875391855 Bacteria 7600475
161 2912718253 2912715099 Bacteria 9460473
162 2912730634 2912723979 Bacteria 8557534
163 2919470409 2919468124 Bacteria 9133025
164 2946048430 2946045630 Bacteria 8527308
165 2946069348 2946064051 Bacteria 8957905
166 2946077284 2946072368 Bacteria 8999607
167 2954384513 2954380949 Bacteria 10050426
168 2954678428 2954673503 Bacteria 9685905
169 2954685727 2954682443 Bacteria 9862841
170 2954695370 2954691527 Bacteria 10720516
171 2954710561 2954701450 Bacteria 10834262
172 2954724750 2954721474 Bacteria 10456478
173 2954737068 2954731030 Bacteria 10243860
174 2954743674 2954740390 Bacteria 10229294
175 2954755919 2954749733 Bacteria 10366972
176 2954762628 2954759201 Bacteria 9358192
177 3006493913 3006486233 Bacteria 8157040
178 3006498988 3006493962 Bacteria 8825450
179 8023631723 8023623736 Bacteria 8593882
180 8048412241 8048406513 Bacteria 8936924
181 8056837445 8056829672 Bacteria 9045328
182 rootH1_10011211
183 rootH1_10018135
184 rootH2_10092493
185 rootH2_10092494
186 rootH1_10047604
187 rootH1_10050304
188 rootH1_10050305
189 Ga0075368_10031465
190 Ga0075367_10000592
191 Ga0105251_10023960
192 Ga0105245_10122236
193 Ga0105246_10014438
194 Ga0182007_10000822
195 Ga0183367_1002
196 Ga0207647_10007709
197 Ga0207639_10012770
198 Ga0209813_10010065
199 Ga0307517_10007699
200 Ga0307515_10000497
201 Ga0307515_10091267
202 Ga0307511_10043633
203 Ga0307512_10005779
204 Ga0307513_10010529
205 Ga0307509_10011503
206 Ga0307509_10048064
207 Ga0307508_10004630
208 Ga0307516_10003058
209 Ga0307410_10098450
210 Ga0307510_10058381
211 Ga0395900_0118927
212 Ga0395900_0262046
213 Ga0395898_0029287
214 Ga0395898_0094736
215 Ga0395901_0114903
216 Ga0439436_0001956
217 Ga0439436_0010167
218 Ga0439433_0001037
219 Ga0439449_0002149
220 Ga0439457_001659
221 Ga0450903_000168
222 Ga0450906_001013
223 Ga0466961_0001187
224 Ga0466961_0015138
225 Ga0466963_0000226
226 Ga0466963_0009262
227 Ga0466964_0010850
228 Ga0466970_0003063
229 Ga0466970_0007932
230 Ga0466957_0007765
231 Ga0466959_0003039
232 Ga0466958_0003109
233 Ga0466967_0065188
234 Ga0495592_0010626
235 Ga0495603_0003400
236 Ga0495603_0044044
237 Ga0495603_0058419
238 Ga0495629_0010131
239 Ga0495629_0029311
240 Ga0495629_0035763
241 Ga0495629_0098077
242 Ga0495651_0001724
243 Ga0495580_0048090
244 Ga0495605_0002633
245 Ga0495662_0002264
246 Ga0495662_0010948
247 Ga0495664_0012765
248 Ga0495584_0100970
249 Ga0495594_0026079
250 Ga0495594_0028576
251 Ga0495607_0058909
252 Ga0495606_0006416
253 Ga0495618_0071231
254 Ga0495620_0002248
255 Ga0495620_0005990
256 Ga0495643_0028261
257 Ga0495648_0014514
258 Ga0495652_0022380
259 Ga0495587_0005704
260 Ga0495645_0010041
261 Ga0495622_0003632
262 Ga0495633_0009508
263 Ga0495668_0014840
264 Ga0495634_0011255
265 Ga0495634_0044545
266 Ga0495625_0045142
267 Ga0495635_0005226
268 Ga0495588_0006667
269 Ga0495588_0011944
270 Ga0495588_0072604
271 Ga0495657_0003659
272 Ga0495657_0026000
273 Ga0495657_0044077
274 Ga0495646_0004894
275 Ga0495613_0040161
276 Ga0495613_0049409
277 Ga0495624_0012261
278 Ga0495671_0007169
279 Ga0495649_0018564
280 Ga0495649_0033121
281 Ga0495589_0026352
282 Ga0495589_0038568
283 Ga0495581_0005662
284 Ga0495581_0015915
285 Ga0495604_0000264
286 Ga0495604_0037457
287 Ga0495636_0008478
288 Ga0495676_0010262
289 Ga0495676_0015372
290 Ga0495680_0005909
291 Ga0495687_014211
292 Ga0495675_0008712
293 Ga0495685_013473
294 Ga0495685_028124
295 Ga0495681_0007407
296 Ga0495593_0010508
297 Ga0495602_0013989
298 Ga0496108_0277806
299 Ga0496109_0012207
300 Ga0501031_0028866
301 Ga0501033_0053914
302 Ga0501038_0015732
303 Ga0501043_0029820
304 Ga0501043_0071646
305 Ga0501047_0007067
306 Ga0501047_0026667
307 Ga0501047_0043355
308 Ga0501047_0286400
309 Ga0501048_0002650
310 Ga0501070_0000919
311 Ga0501074_0000869
312 Ga0501035_0008572
313 Ga0501035_0096682
314 Ga0501035_0176267
315 Ga0501044_0051973
316 Ga0501044_0266644
317 nmdc:mga04h51_14483_c1
318 Ga0495619_0082546
319 Ga0500640_002145
320 Ga0466962_0000820
321 2954004933
322 2547411828
323 2616696584
324 2616903095
325 2643903100
326 2644404390
327 2644439523
328 2644633111
329 2784589902
330 2786672152
331 2808843526
332 2808913096
333 2809233571
334 2812356515
335 2812479255
336 2819695092
337 2862384201
338 2862512044
339 2862578006
340 2867437013
341 2875396186
342 2912718253
343 2912730634
344 2919470409
345 2946048430
346 2946069348
347 2946077284
348 2954384513
349 2954678428
350 2954685727
351 2954695370
352 2954710561
353 2954724750
354 2954737068
355 2954743674
356 2954755919
357 2954762628
358 3006493913
359 3006498988
360 8023631723
361 8048412241
362 8056837445

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02838

Glyco_hydro_20b

Glycosyl hydrolase family 20, domain 2

76

195

0.87

PF00728

Glyco_hydro_20

Glycosyl hydrolase family 20, catalytic domain

199

526

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
8hvb-assembly1.cif.gz_A crystal structure of lacto-n-biosidase strlnbase from streptomyces sp. strain 142, lacto-n-biose complex 0.8578 45 404
4h04-assembly1.cif.gz_A lacto-n-biosidase from bifidobacterium bifidum 0.8562 31 404
4pys-assembly2.cif.gz_B the crystal structure of beta-n-acetylhexosaminidase from bacteroides fragilis nctc 9343 0.8393 45 404
6q63-assembly3.cif.gz_C bt0459 0.8349 45 411
7dvb-assembly3.cif.gz_C d335n variant of bt4394 in complex with 6so3-nag-oxazoline intermediate 0.8319 46 384
ID Description Score Start End Superfamily
4jawB02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.9163 159 404 3.20.20.80
3gh7A02 Alpha Beta;2-Layer Sandwich;Chitobiase; domain 2;Chitobiase/beta-hexosaminidase domain 2-like 0.8485 41 160 3.30.379.10
5bxpA01 Alpha Beta;2-Layer Sandwich;Chitobiase; domain 2;Chitobiase/beta-hexosaminidase domain 2-like 0.8319 41 157 3.30.379.10
af_A0A1D6G7A1_170_514_3.20.20.80 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.8242 160 403 3.20.20.80
af_Q54K56_193_563_3.20.20.80 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.8231 160 403 3.20.20.80
ID Description Score Start End GO Terms
AF-A0A7K2LZ97-F1-model_v4 Family 20 glycosylhydrolase 0.9716 70 412 GO:0005975
GO:0016231
AF-A0A0M8T5W9-F1-model_v4 Beta-N-acetylglucosaminidase 0.9701 115 373 GO:0005975
GO:0016231
AF-A0A0M8T5W9-F1-model_v4 Beta-N-acetylglucosaminidase 0.9556 115 373 GO:0005975
GO:0016231
AF-A0A4D4LXU5-F1-model_v4 Glycoside hydrolase family 20 catalytic domain-containing protein 0.9513 146 412 GO:0005975
GO:0016231
AF-A0A7X5N2U1-F1-model_v4 beta-N-acetylhexosaminidase (EC 3.2.1.52) (Beta-N-acetylhexosaminidase) 0.9422 158 252 GO:0004563
GO:0005975
GO:0016020
GO:0030203

Map