F278282

General Info

Members Datasets Scaffolds Average Seq Length
181 129 155 429

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2919523602|2919524391
Length 477
Sequence LFFVVAFLLVAFGGLMAAVDSALAVQSRGDIADLAETSRAKKSLRSIAEDPGAYLNAVSFTRLLAETTAAVLVTLAFEQIFAEWWVSLILAALIMTAVSFVLVGVSPRSVGRANSTLLLRLTAPLVRFVRVVLGPIPGGLVALGNRVTPSRARSAPVTSEEQLLSIVDEATEFDVLEEDDRELIHSIFEFNETVVREVMIPRTDMITVDATAGLGTAMGLFFSTGVSRMPVIDGGDPDEVVGILYLRDAAKLSFERPLGADELTVRDLARPALFVPESQKADALLAQMQRESNHLAMVVDEYGGIAGLVTLEDLIEELVGDISDEYDHEVALIQPLGEGRYRIATRLPIDDLGELFDLEIEDEDVDSVGGLVTKALGRLPEVGSTVNVHGLRFTVDRIEGKHKHVASVLVERDVALLPEPDGGHVPMPKDEDRPDRHASERRASERHASERHASERHQTERQTARTDHRHTAQETRS

Samples

Sample ID Description Type Environment
1 2585428094 Herbiconiux sp. YR403 Isolate Rhizosphere
2 2643221572 Leifsonia sp. Root60 Isolate Unclassified
3 2643221616 Leifsonia sp. Root227 Isolate Unclassified
4 2643221632 Leifsonia sp. Root112D2 Isolate Unclassified
5 2643221635 Yonghaparkia sp. Root332 Isolate Unclassified
6 2643221669 Leifsonia sp. Root1293 Isolate Unclassified
7 2721755702 Agromyces sp. AR33 Isolate Rhizosphere
8 2808606372 Agromyces sp. 23-23 Isolate Unclassified
9 2844841374 Leifsonia soli DSM 23871 Isolate Rhizosphere
10 2844852863 Herbiconiux flava DSM 26474 Isolate Rhizosphere
11 2857729791 Plantibacter sp. R-72288 Isolate Unclassified
12 2857737099 Lysinimonas sp. R-73066 Isolate Unclassified
13 2862993130 Planctomonas deserti 13S1-3 v2 Isolate Rhizosphere
14 2883821847 Microlunatus elymi KUDC0627 Isolate Rhizosphere
15 2884763398 Leifsonia sp. PS1209 Isolate Stem Tuber
16 2919055335 Leifsonia sp. 1010 Isolate Rhizosphere
17 2919443155 Agromyces sp. 3263 Isolate Rhizosphere
18 2919523602 Leifsonia shinshuensis 3821 Isolate Unclassified
19 2928121344 Plantibacter flavus 1756 Isolate Rhizosphere
20 2928153084 Leifsonia sp. 563 Isolate Unclassified
21 2935409751 Agromyces sp. PvR057 Isolate Rhizosphere
22 2966921586 Rathayibacter agropyri 617 Isolate Rhizosphere
23 2966924647 Frigoribacterium sp. 2355 Isolate Rhizosphere
24 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
25 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
26 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
27 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
28 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
29 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
30 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
31 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
32 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
33 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
34 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
35 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
36 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
37 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
38 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
39 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
40 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
41 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
42 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
43 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
44 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
45 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
46 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
47 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
48 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
49 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
50 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
51 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
52 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
53 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
54 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
55 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
56 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
57 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
61 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
62 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
63 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
64 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
65 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
66 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
67 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
68 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
69 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
70 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
71 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
72 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
73 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
74 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
75 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
76 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
77 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
78 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
79 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
80 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
81 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
82 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
83 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
84 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
85 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
86 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
87 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
88 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
89 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
90 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
91 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
92 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
93 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
94 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
95 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
96 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
97 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
98 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
99 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
100 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
101 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
102 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
103 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
104 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
105 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
106 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
107 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
108 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
109 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
110 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
111 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
112 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
113 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
114 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
115 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
116 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
117 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
118 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
119 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
120 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
121 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
122 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
123 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
124 3300053155 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 endosphere Metagenome Endosphere
125 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
126 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
127 8046352972 Agromyces mangrovi NBRC 112812 Isolate Rhizosphere
128 8056037122 Herbiconiux gentiana CPCC 205716 Isolate Rhizosphere
129 8057345674 Herbiconiux aconitum CPCC 205763 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 82.87
Metatranscriptomes 2.76
Isolates 14.36

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 24.31
Nodule 0
Rhizoplane 3.87
Rhizosphere 54.7
Stem 0
Stem Tuber 0.55
Unclassified 16.57

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24735J21928_10004172 3300002067 Bacteria 4880
2 JGI25164J39214_1000488 3300002772 Bacteria 19505
3 JGI25406J46586_10026177 3300003203 Bacteria 2253
4 JGI25165J46597_1000002 3300003214 Bacteria 765387
5 Ga0006562J51391_1039615 3300003578 Bacteria 3999
6 Ga0006562J51391_1039617 3300003578 Bacteria 3430
7 Ga0055539_1000008 3300003752 Bacteria 537665
8 Ga0055533_1000001 3300003756 Bacteria 1863437
9 Ga0055525_1000221 3300003759 Bacteria 62301
10 Ga0055525_1000365 3300003759 Bacteria 30386
11 Ga0055527_1000001 3300003760 Bacteria 850044
12 Ga0055529_1000018 3300003763 Bacteria 344344
13 Ga0070658_10005008 3300005327 Bacteria 10788
14 Ga0070658_10013650 3300005327 Bacteria 6517
15 Ga0070671_100062788 3300005355 Bacteria 3093
16 Ga0070667_100249411 3300005367 Bacteria 1587
17 Ga0068855_100004021 3300005563 Bacteria 17952
18 Ga0081539_10000170 3300005985 Bacteria 152854
19 Ga0075365_10031001 3300006038 Bacteria 3428
20 Ga0075364_10010474 3300006051 Bacteria 5601
21 Ga0075369_10003127 3300006186 Bacteria 5996
22 Ga0105240_10194007 3300009093 Bacteria 2386
23 Ga0157369_10260973 3300013105 Bacteria 1807
24 Ga0206354_10874176 3300020081 Bacteria 4833
25 Ga0206353_11195972 3300020082 Bacteria 3419
26 Ga0206353_12056957 3300020082 Bacteria 3195
27 Ga0209566_100026 3300025225 Bacteria 367457
28 Ga0209674_100001 3300025226 Bacteria 4013750
29 Ga0209672_100006 3300025228 Bacteria 1004497
30 Ga0209147_101211 3300025229 Bacteria 10340
31 Ga0209563_100001 3300025230 Bacteria 4013775
32 Ga0209563_101106 3300025230 Bacteria 7719
33 Ga0207427_100124 3300025231 Bacteria 98217
34 Ga0209437_100926 3300025233 Bacteria 11130
35 Ga0209677_100001 3300025253 Bacteria 4013787
36 Ga0209677_100523 3300025253 Bacteria 21334
37 Ga0209148_1000015 3300025254 Bacteria 850103
38 Ga0209233_1000001 3300025261 Bacteria 2992747
39 Ga0209455_1000013 3300025272 Bacteria 850103
40 Ga0209455_1000727 3300025272 Bacteria 18961
41 Ga0207643_10053591 3300025908 Bacteria 2291
42 Ga0207667_10004049 3300025949 Bacteria 18003
43 Ga0207658_10023310 3300025986 Bacteria 4320
44 Ga0307515_10028962 3300028794 Bacteria 9384
45 Ga0307514_10037269 3300031649 Bacteria 3858
46 Ga0395899_0000786 3300037312 Bacteria 31058
47 Ga0395900_0002187 3300037418 Bacteria 21855
48 Ga0395898_0000752 3300037466 Bacteria 56634
49 Ga0466972_0019082 3300044658 Bacteria 3428
50 Ga0466965_0000002 3300044683 Bacteria 297957
51 Ga0466965_0011505 3300044683 Bacteria 4150
52 Ga0466965_0100448 3300044683 Bacteria 1479
53 Ga0466966_0031103 3300044684 Bacteria 3462
54 Ga0466970_0006890 3300044765 Bacteria 5688
55 Ga0466970_0081129 3300044765 Bacteria 1753
56 Ga0466957_0109813 3300044842 Bacteria 1748
57 Ga0466960_0007994 3300044901 Bacteria 4317
58 Ga0466967_0188124 3300045976 Bacteria 1950
59 Ga0495590_0001219 3300046457 Bacteria 11238
60 Ga0495686_0106713 3300047472 Bacteria 1684
61 Ga0496100_0151915 3300048903 Bacteria 1652
62 Ga0496102_0078679 3300048905 Bacteria 3036
63 Ga0496104_0033417 3300048907 Bacteria 4791
64 Ga0496105_0005304 3300048908 Bacteria 9771
65 Ga0496105_0020315 3300048908 Bacteria 5366
66 Ga0496113_0155317 3300048916 Bacteria 1807
67 Ga0496115_0050664 3300048918 Bacteria 3327
68 Ga0496117_0001586 3300048920 Bacteria 32228
69 Ga0496117_0070081 3300048920 Bacteria 2357
70 Ga0496117_0073712 3300048920 Bacteria 2276
71 Ga0496118_0006827 3300048921 Bacteria 12384
72 Ga0496119_0006884 3300048922 Bacteria 10378
73 Ga0496119_0006977 3300048922 Bacteria 10298
74 Ga0496119_0014510 3300048922 Bacteria 6158
75 Ga0496120_0000655 3300048923 Bacteria 50898
76 Ga0496120_0050437 3300048923 Bacteria 2383
77 Ga0496121_0005374 3300048924 Bacteria 16460
78 Ga0496121_0057877 3300048924 Bacteria 3209
79 Ga0496122_0005975 3300048925 Bacteria 14245
80 Ga0496122_0029507 3300048925 Bacteria 4625
81 Ga0496124_0000439 3300048927 Bacteria 73567
82 Ga0496125_0083633 3300048928 Bacteria 2427
83 Ga0496126_0005174 3300048929 Bacteria 15080
84 Ga0501031_0000112 3300049568 Bacteria 43234
85 Ga0501032_0001629 3300049569 Bacteria 17847
86 Ga0501032_0085532 3300049569 Bacteria 2096
87 Ga0501033_0002294 3300049570 Bacteria 16338
88 Ga0501033_0006689 3300049570 Bacteria 9007
89 Ga0501034_0002094 3300049571 Bacteria 24916
90 Ga0501034_0008610 3300049571 Bacteria 10767
91 Ga0501034_0055896 3300049571 Bacteria 3972
92 Ga0501034_0113282 3300049571 Bacteria 2702
93 Ga0501034_0138979 3300049571 Bacteria 2409
94 Ga0501034_0187476 3300049571 Bacteria 2031
95 Ga0501036_0000447 3300049572 Bacteria 29436
96 Ga0501036_0074455 3300049572 Bacteria 2872
97 Ga0501036_0097109 3300049572 Bacteria 2491
98 Ga0501037_0000444 3300049573 Bacteria 33921
99 Ga0501037_0006241 3300049573 Bacteria 8718
100 Ga0501037_0022947 3300049573 Bacteria 4615
101 Ga0501037_0058915 3300049573 Bacteria 2802
102 Ga0501037_0074383 3300049573 Bacteria 2469
103 Ga0501038_0002802 3300049574 Bacteria 16230
104 Ga0501038_0073892 3300049574 Bacteria 2885
105 Ga0501039_0000369 3300049575 Bacteria 32246
106 Ga0501042_0070780 3300049578 Bacteria 2495
107 Ga0501043_0005322 3300049579 Bacteria 10403
108 Ga0501043_0031215 3300049579 Bacteria 4189
109 Ga0501043_0099063 3300049579 Bacteria 2291
110 Ga0501046_0000142 3300049580 Bacteria 74959
111 Ga0501046_0014818 3300049580 Bacteria 6562
112 Ga0501047_0003067 3300049581 Bacteria 15842
113 Ga0501047_0006555 3300049581 Bacteria 10962
114 Ga0501047_0010144 3300049581 Bacteria 8908
115 Ga0501047_0093777 3300049581 Bacteria 2881
116 Ga0501048_0000463 3300049582 Bacteria 28472
117 Ga0501067_0021659 3300049583 Bacteria 3557
118 Ga0501068_0042354 3300049584 Bacteria 2738
119 Ga0501069_0000465 3300049585 Bacteria 18497
120 Ga0501070_0000088 3300049586 Bacteria 77423
121 Ga0501070_0000838 3300049586 Bacteria 27930
122 Ga0501070_0002005 3300049586 Bacteria 17897
123 Ga0501070_0005761 3300049586 Bacteria 10565
124 Ga0501073_0000391 3300049589 Bacteria 29750
125 Ga0501074_0000427 3300049590 Bacteria 25165
126 Ga0501080_0000446 3300049742 Bacteria 32115
127 Ga0501080_0001086 3300049742 Bacteria 22397
128 Ga0501080_0013739 3300049742 Bacteria 7455
129 Ga0501083_0096399 3300049744 Bacteria 1952
130 Ga0501035_0003549 3300049822 Bacteria 14897
131 Ga0501035_0004793 3300049822 Bacteria 12826
132 Ga0501044_0003513 3300049823 Bacteria 17638
133 Ga0501044_0018416 3300049823 Bacteria 7481
134 Ga0501044_0103041 3300049823 Bacteria 2869
135 nmdc:mga00v17_25157_c1 3300050491 Bacteria 3458
136 nmdc:mga0yw44_16684_c1 3300050492 Bacteria 3975
137 nmdc:mga0sz30_44506_c1 3300050516 Bacteria 1870
138 Ga0500635_0000013 3300053080 Bacteria 133088
139 Ga0500651_0000892 3300053093 Bacteria 14633
140 Ga0500556_0000239 3300053104 Bacteria 44477
141 Ga0500562_004534 3300053108 Bacteria 3509
142 Ga0500593_061924 3300053117 Bacteria 1642
143 Ga0500559_0000156 3300053136 Bacteria 53941
144 Ga0500559_0000372 3300053136 Bacteria 33038
145 Ga0500559_0001932 3300053136 Bacteria 11223
146 Ga0500568_0002975 3300053139 Bacteria 9697
147 Ga0500573_0000106 3300053140 Bacteria 35262
148 Ga0500573_0008039 3300053140 Bacteria 5794
149 Ga0500573_0061748 3300053140 Bacteria 2146
150 Ga0500616_0000071 3300053153 Bacteria 232527
151 Ga0500616_0002797 3300053153 Bacteria 14052
152 Ga0500616_0049763 3300053153 Bacteria 2216
153 Ga0500620_000169 3300053155 Bacteria 13137
154 Ga0501084_0024873 3300054114 Bacteria 4998
155 Ga0466962_0032404 3300061719 Bacteria 2502

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300048925 Ga0496122_0029507 Ga0496122_0029507_16_1095 327
2 3300005367 Ga0070667_100249411 Ga0070667_1002494112 369
3 3300025986 Ga0207658_10023310 Ga0207658_100233102 369
4 3300006186 Ga0075369_10003127 Ga0075369_100031272 375
5 3300050516 nmdc:mga0sz30_44506_c1 nmdc:mga0sz30_44506_c1_369_1682 375
6 3300047472 Ga0495686_0106713 Ga0495686_0106713_199_1485 381
7 3300050492 nmdc:mga0yw44_16684_c1 nmdc:mga0yw44_16684_c1_2098_3408 389
8 3300028794 Ga0307515_10028962 Ga0307515_1002896211 390
9 3300044683 Ga0466965_0000002 Ga0466965_0000002_132218_133516 393
10 3300006051 Ga0075364_10010474 Ga0075364_100104742 394
11 3300049571 Ga0501034_0008610 Ga0501034_0008610_8485_9762 394
12 3300044683 Ga0466965_0100448 Ga0466965_0100448_17_1249 396
13 3300003203 JGI25406J46586_10026177 JGI25406J46586_100261772 397
14 3300005355 Ga0070671_100062788 Ga0070671_1000627883 397
15 3300005985 Ga0081539_10000170 Ga0081539_10000170126 397
16 3300049583 Ga0501067_0021659 Ga0501067_0021659_187_1464 398
17 3300046457 Ga0495590_0001219 Ga0495590_0001219_6793_8088 399
18 3300049568 Ga0501031_0000112 Ga0501031_0000112_22253_23593 399
19 3300049569 Ga0501032_0001629 Ga0501032_0001629_963_2303 399
20 3300049570 Ga0501033_0002294 Ga0501033_0002294_14226_15566 399
21 3300049571 Ga0501034_0002094 Ga0501034_0002094_690_2030 399
22 3300049572 Ga0501036_0000447 Ga0501036_0000447_962_2302 399
23 3300049573 Ga0501037_0000444 Ga0501037_0000444_21240_22580 399
24 3300049574 Ga0501038_0002802 Ga0501038_0002802_10017_11357 399
25 3300049575 Ga0501039_0000369 Ga0501039_0000369_16474_17814 399
26 3300049578 Ga0501042_0070780 Ga0501042_0070780_801_2141 399
27 3300049580 Ga0501046_0000142 Ga0501046_0000142_10017_11357 399
28 3300049582 Ga0501048_0000463 Ga0501048_0000463_3828_5168 399
29 3300049584 Ga0501068_0042354 Ga0501068_0042354_822_2162 399
30 3300049585 Ga0501069_0000465 Ga0501069_0000465_1739_3079 399
31 3300049586 Ga0501070_0000838 Ga0501070_0000838_25677_27017 399
32 3300049590 Ga0501074_0000427 Ga0501074_0000427_23336_24676 399
33 3300049742 Ga0501080_0001086 Ga0501080_0001086_1738_3078 399
34 3300049822 Ga0501035_0004793 Ga0501035_0004793_7020_8360 399
35 3300053104 Ga0500556_0000239 Ga0500556_0000239_5964_7268 399
36 3300053117 Ga0500593_061924 Ga0500593_061924_234_1538 399
37 3300053153 Ga0500616_0049763 Ga0500616_0049763_759_2063 399
38 3300054114 Ga0501084_0024873 Ga0501084_0024873_457_1797 399
39 3300049571 Ga0501034_0138979 Ga0501034_0138979_698_1996 401
40 3300049573 Ga0501037_0006241 Ga0501037_0006241_7332_8630 401
41 3300049579 Ga0501043_0005322 Ga0501043_0005322_8689_9987 401
42 3300049581 Ga0501047_0010144 Ga0501047_0010144_3258_4556 401
43 3300049586 Ga0501070_0002005 Ga0501070_0002005_15842_17140 401
44 3300049742 Ga0501080_0000446 Ga0501080_0000446_11906_13204 401
45 3300049744 Ga0501083_0096399 Ga0501083_0096399_123_1421 401
46 3300053108 Ga0500562_004534 Ga0500562_004534_799_2103 401
47 3300053136 Ga0500559_0000156 Ga0500559_0000156_10064_11368 401
48 3300049571 Ga0501034_0055896 Ga0501034_0055896_1987_3285 402
49 3300049742 Ga0501080_0013739 Ga0501080_0013739_4178_5473 402
50 3300053080 Ga0500635_0000013 Ga0500635_0000013_66293_67591 402
51 3300049569 Ga0501032_0085532 Ga0501032_0085532_266_1564 403
52 3300049570 Ga0501033_0006689 Ga0501033_0006689_7065_8363 403
53 3300049571 Ga0501034_0113282 Ga0501034_0113282_746_2044 403
54 3300049571 Ga0501034_0187476 Ga0501034_0187476_237_1535 403
55 3300049572 Ga0501036_0097109 Ga0501036_0097109_203_1501 403
56 3300049573 Ga0501037_0022947 Ga0501037_0022947_2406_3704 403
57 3300049573 Ga0501037_0074383 Ga0501037_0074383_1166_2419 403
58 3300049574 Ga0501038_0073892 Ga0501038_0073892_831_2129 403
59 3300049579 Ga0501043_0099063 Ga0501043_0099063_975_2273 403
60 3300049580 Ga0501046_0014818 Ga0501046_0014818_1732_2988 403
61 3300049581 Ga0501047_0003067 Ga0501047_0003067_6059_7315 403
62 3300049581 Ga0501047_0093777 Ga0501047_0093777_34_1332 403
63 3300049586 Ga0501070_0005761 Ga0501070_0005761_9164_10462 403
64 3300049823 Ga0501044_0003513 Ga0501044_0003513_9118_10374 403
65 3300006038 Ga0075365_10031001 Ga0075365_100310013 404
66 3300049589 Ga0501073_0000391 Ga0501073_0000391_16758_18053 404
67 3300053139 Ga0500568_0002975 Ga0500568_0002975_4705_6006 404
68 3300009093 Ga0105240_10194007 Ga0105240_101940073 407
69 iso_pu_bacteria 2643221632 2644183284 407
70 3300048922 Ga0496119_0014510 Ga0496119_0014510_3546_4868 408
71 3300048923 Ga0496120_0050437 Ga0496120_0050437_439_1740 408
72 3300048927 Ga0496124_0000439 Ga0496124_0000439_9845_11167 408
73 3300044901 Ga0466960_0007994 Ga0466960_0007994_1938_3302 413
74 3300049823 Ga0501044_0103041 Ga0501044_0103041_972_2312 413
75 3300053136 Ga0500559_0000372 Ga0500559_0000372_3346_4680 413
76 3300053136 Ga0500559_0001932 Ga0500559_0001932_3789_5123 413
77 iso_pu_bacteria 2857737099 2857739620 413
78 3300013105 Ga0157369_10260973 Ga0157369_102609732 414
79 3300044842 Ga0466957_0109813 Ga0466957_0109813_131_1429 414
80 3300048924 Ga0496121_0005374 Ga0496121_0005374_3044_4351 414
81 iso_pu_bacteria 2643221616 2644095945 414
82 iso_pu_bacteria 2884763398 2884765308 414
83 iso_pu_bacteria 2966924647 2966925033 414
84 3300044683 Ga0466965_0011505 Ga0466965_0011505_1130_2470 415
85 3300044765 Ga0466970_0006890 Ga0466970_0006890_1213_2553 415
86 3300045976 Ga0466967_0188124 Ga0466967_0188124_600_1940 415
87 3300049572 Ga0501036_0074455 Ga0501036_0074455_1009_2316 415
88 3300049573 Ga0501037_0058915 Ga0501037_0058915_539_1846 415
89 3300049579 Ga0501043_0031215 Ga0501043_0031215_1486_2793 415
90 3300049581 Ga0501047_0006555 Ga0501047_0006555_6498_7805 415
91 3300049822 Ga0501035_0003549 Ga0501035_0003549_12793_14100 415
92 3300049823 Ga0501044_0018416 Ga0501044_0018416_3063_4370 415
93 3300050491 nmdc:mga00v17_25157_c1 nmdc:mga00v17_25157_c1_1848_3152 415
94 iso_pu_bacteria 2857729791 2857730003 416
95 iso_pu_bacteria 2928121344 2928123225 416
96 3300020082 Ga0206353_11195972 Ga0206353_111959722 417
97 3300048929 Ga0496126_0005174 Ga0496126_0005174_3951_5312 417
98 3300002772 JGI25164J39214_1000488 JGI25164J39214_100048810 418
99 3300003214 JGI25165J46597_1000002 JGI25165J46597_1000002595 418
100 3300025231 Ga0207427_100124 Ga0207427_10012485 418
101 3300025233 Ga0209437_100926 Ga0209437_10092610 418
102 3300025261 Ga0209233_1000001 Ga0209233_10000012212 418
103 3300048908 Ga0496105_0005304 Ga0496105_0005304_6571_7869 418
104 3300048908 Ga0496105_0020315 Ga0496105_0020315_2887_4185 418
105 3300048918 Ga0496115_0050664 Ga0496115_0050664_630_1928 418
106 3300053153 Ga0500616_0002797 Ga0500616_0002797_6509_7816 418
107 3300048922 Ga0496119_0006884 Ga0496119_0006884_4084_5391 420
108 3300048924 Ga0496121_0057877 Ga0496121_0057877_1727_3034 420
109 3300048928 Ga0496125_0083633 Ga0496125_0083633_639_1946 420
110 3300053140 Ga0500573_0008039 Ga0500573_0008039_2978_4282 420
111 3300053140 Ga0500573_0061748 Ga0500573_0061748_378_1682 420
112 3300053153 Ga0500616_0000071 Ga0500616_0000071_49881_51326 420
113 iso_pu_bacteria 2721755702 2723642349 420
114 iso_pu_bacteria 2808606372 2808902324 420
115 iso_pu_bacteria 2862993130 2862995837 420
116 iso_pu_bacteria 2919443155 2919445961 420
117 iso_pu_bacteria 2935409751 2935412730 420
118 iso_pu_bacteria 8046352972 8046356226 420
119 3300037418 Ga0395900_0002187 Ga0395900_0002187_9804_11177 421
120 3300037466 Ga0395898_0000752 Ga0395898_0000752_41194_42567 421
121 3300048903 Ga0496100_0151915 Ga0496100_0151915_243_1625 421
122 3300048905 Ga0496102_0078679 Ga0496102_0078679_423_1823 421
123 3300048907 Ga0496104_0033417 Ga0496104_0033417_1229_2629 421
124 3300048920 Ga0496117_0001586 Ga0496117_0001586_23283_24635 421
125 3300049586 Ga0501070_0000088 Ga0501070_0000088_59277_60584 421
126 3300053093 Ga0500651_0000892 Ga0500651_0000892_6435_7754 421
127 3300053140 Ga0500573_0000106 Ga0500573_0000106_26598_27905 421
128 iso_pu_bacteria 2643221572 2643875437 421
129 iso_pu_bacteria 2643221669 2644382492 421
130 3300005327 Ga0070658_10005008 Ga0070658_100050088 422
131 3300005563 Ga0068855_100004021 Ga0068855_1000040217 422
132 3300025949 Ga0207667_10004049 Ga0207667_1000404911 422
133 3300048920 Ga0496117_0073712 Ga0496117_0073712_281_1603 422
134 3300048922 Ga0496119_0006977 Ga0496119_0006977_8497_9819 422
135 3300048923 Ga0496120_0000655 Ga0496120_0000655_12146_13468 422
136 3300053155 Ga0500620_000169 Ga0500620_000169_3857_5182 422
137 3300003760 Ga0055527_1000001 Ga0055527_1000001211 424
138 3300003763 Ga0055529_1000018 Ga0055529_1000018285 424
139 3300025228 Ga0209672_100006 Ga0209672_100006765 424
140 3300025229 Ga0209147_101211 Ga0209147_1012115 424
141 3300025254 Ga0209148_1000015 Ga0209148_1000015609 424
142 3300025272 Ga0209455_1000013 Ga0209455_1000013609 424
143 3300025908 Ga0207643_10053591 Ga0207643_100535912 424
144 3300048916 Ga0496113_0155317 Ga0496113_0155317_393_1709 424
145 3300048925 Ga0496122_0005975 Ga0496122_0005975_9813_11198 424
146 iso_pu_bacteria 2844852863 2844854874 424
147 iso_pu_bacteria 2643221635 2644199102 425
148 3300005327 Ga0070658_10013650 Ga0070658_100136505 426
149 3300044765 Ga0466970_0081129 Ga0466970_0081129_52_1458 427
150 3300061719 Ga0466962_0032404 Ga0466962_0032404_52_1419 428
151 3300031649 Ga0307514_10037269 Ga0307514_100372694 430
152 3300044684 Ga0466966_0031103 Ga0466966_0031103_1950_3347 431
153 3300003752 Ga0055539_1000008 Ga0055539_1000008387 432
154 3300003756 Ga0055533_1000001 Ga0055533_1000001683 432
155 3300003759 Ga0055525_1000221 Ga0055525_100022151 432
156 3300003759 Ga0055525_1000365 Ga0055525_100036512 432
157 3300025225 Ga0209566_100026 Ga0209566_10002640 432
158 3300025226 Ga0209674_100001 Ga0209674_100001684 432
159 3300025230 Ga0209563_100001 Ga0209563_100001684 432
160 3300025253 Ga0209677_100001 Ga0209677_100001684 432
161 3300037312 Ga0395899_0000786 Ga0395899_0000786_2981_4453 432
162 iso_pu_bacteria 2883821847 2883823886 433
163 3300048920 Ga0496117_0070081 Ga0496117_0070081_117_1463 434
164 3300048921 Ga0496118_0006827 Ga0496118_0006827_4272_5618 434
165 iso_pu_bacteria 8056037122 8056038858 435
166 3300020081 Ga0206354_10874176 Ga0206354_108741763 437
167 3300020082 Ga0206353_12056957 Ga0206353_120569573 437
168 3300025253 Ga0209677_100523 Ga0209677_1005233 437
169 iso_pu_bacteria 2585428094 2587862574 438
170 iso_pu_bacteria 2966921586 2966922347 438
171 3300025272 Ga0209455_1000727 Ga0209455_100072713 439
172 3300044658 Ga0466972_0019082 Ga0466972_0019082_955_2322 440
173 iso_pu_bacteria 8057345674 8057349597 440
174 iso_pu_bacteria 2919523602 2919524391 441
175 iso_pu_bacteria 2844841374 2844842350 444
176 3300025230 Ga0209563_101106 Ga0209563_1011067 445
177 iso_pu_bacteria 2919055335 2919057998 447
178 iso_pu_bacteria 2928153084 2928155987 447
179 3300002067 JGI24735J21928_10004172 JGI24735J21928_100041724 451
180 3300003578 Ga0006562J51391_1039615 Ga0006562J51391_10396153 451
181 3300003578 Ga0006562J51391_1039617 Ga0006562J51391_10396172 451

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01595

CNNM

Cyclin M transmembrane N-terminal domain

4

180

0.97

PF03471

CorC_HlyC

Transporter associated domain

334

414

0.9

PF00571

CBS

CBS domain

265

320

0.85

PF00571

CBS

CBS domain

195

255

0.84

Feature Viewer

pLDDT pTM Quality
71.75 0.42 Low
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Predicted Structure (AlphaFold2)

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