F278263
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 181 | 154 | 155 | 406 |
Family's Representative Sequence
| Representative Sequence | iso_pu_bacteria|2857479173|2857481117 |
| Length | 429 |
| Sequence | NPEDNALRGAAEPRTLAEACDLVTTPDLDVSADGMFGQYGGAHLPPQLASPMAEVARAYAEARQDPDFYAEYRRLLRDAVGRPSPLTPLDRLSDELGGARIVLKREDLNHTGAHKINHTIGEALLAKRMGKRSLIAETGAGQHGVALATAAAMVGLDCEIHMGAIDVAKQHPNVVRMRLLGTKVVSVEREGRSLKEAVDSAFEVYAADPEKYLFAIGSVVGPHPFPTMIRDFQSVVGREARAQFQERFGALPSAVVAAVGGGSNAIGAFTAFLDDADVALVGVEPGGRSSDKGEHAMTMTQGREGVLHGMATLVLADDDGTPDPVHSIASGLDYPGVGPQHAHFARVGRVRYVAEDDAAVLDAFQRLTKFEGVIPALESAHAVAHAIRLAPQMGRDERILVNLSGRGDKDVDYVAEKLGLTGEADEVVR |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2551306352 | Acinetobacter sp. GG2 | Isolate | Rhizosphere |
| 2 | 2639762793 | Acinetobacter calcoaceticus GK1 | Isolate | Rhizosphere |
| 3 | 2643221665 | Acinetobacter sp. Root1280 | Isolate | Unclassified |
| 4 | 2671180531 | Gemmata sp. SH-PL17 | Isolate | Unclassified |
| 5 | 2675903507 | Acinetobacter calcoaceticus GK2 | Isolate | Unclassified |
| 6 | 2687453257 | Planctomyces sp. SH-PL62 | Isolate | Unclassified |
| 7 | 2687453341 | Pirellula sp. SH-Sr6A | Isolate | Unclassified |
| 8 | 2721755523 | Delftia sp. HK171 | Isolate | Unclassified |
| 9 | 2728369097 | Stutzerimonas balearica st101 | Isolate | Unclassified |
| 10 | 2744054655 | Acinetobacter sp. BMW17 | Isolate | Unclassified |
| 11 | 2773857761 | Acinetobacter sp. 3664 | Isolate | Unclassified |
| 12 | 2773857770 | Acinetobacter sp. 3636 | Isolate | Unclassified |
| 13 | 2836160341 | Unclassified Planctomycetes Bin 134 | Isolate | Unclassified |
| 14 | 2839138175 | Delftia acidovorans B15 | Isolate | Rhizosphere |
| 15 | 2857479173 | Micrococcus sp. R-74225 | Isolate | Unclassified |
| 16 | 2857632687 | Micrococcus sp. R-73081 | Isolate | Unclassified |
| 17 | 2870804320 | Micrococcus yunnanensis DSM 21948 | Isolate | Unclassified |
| 18 | 2894023352 | Diaphorobacter ruginosibacter DSM 27467 | Isolate | Nodule |
| 19 | 2919182534 | Acinetobacter calcoaceticus 2589 | Isolate | Rhizosphere |
| 20 | 2928515477 | Acinetobacter bereziniae 1375 | Isolate | Rhizosphere |
| 21 | 2932422444 | Comamonas sp. 4034 | Isolate | Rhizosphere |
| 22 | 3001889506 | Janibacter sp. YIM B02568 | Isolate | Unclassified |
| 23 | 3300003856 | Agave microbial communities from Guanajuato, Mexico - At.Am.rz | Metagenome | Rhizosphere |
| 24 | 3300005272 | Switchgrass rhizosphere microbial communities from Buena Vista Grasslands Wildlife Area, Michigan, USA - BV2.1 v1 | Metagenome | Rhizosphere |
| 25 | 3300005289 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) | Metagenome | Rhizosphere |
| 26 | 3300005331 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG | Metagenome | Rhizosphere |
| 27 | 3300005335 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG | Metagenome | Rhizosphere |
| 28 | 3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Metagenome | Rhizosphere |
| 29 | 3300005344 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG | Metagenome | Rhizosphere |
| 30 | 3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Metagenome | Rhizosphere |
| 31 | 3300005364 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG | Metagenome | Rhizosphere |
| 32 | 3300005365 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG | Metagenome | Rhizosphere |
| 33 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 34 | 3300005434 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG | Metagenome | Rhizosphere |
| 35 | 3300005436 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG | Metagenome | Rhizosphere |
| 36 | 3300005439 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG | Metagenome | Rhizosphere |
| 37 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 38 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 39 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 40 | 3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Metagenome | Rhizosphere |
| 41 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 42 | 3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Metagenome | Rhizosphere |
| 43 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 44 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 45 | 3300006163 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG | Metagenome | Rhizosphere |
| 46 | 3300006175 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG | Metagenome | Rhizosphere |
| 47 | 3300006844 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Metagenome | Rhizosphere |
| 48 | 3300006852 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 | Metagenome | Rhizosphere |
| 49 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 50 | 3300006946 | Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG | Metagenome | Nodule |
| 51 | 3300009036 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG | Metagenome | Rhizosphere |
| 52 | 3300009092 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG | Metagenome | Rhizosphere |
| 53 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 54 | 3300009101 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG | Metagenome | Rhizosphere |
| 55 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 56 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 57 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 58 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 59 | 3300013102 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG | Metagenome | Rhizosphere |
| 60 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 61 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 62 | 3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Metagenome | Rhizosphere |
| 63 | 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Metagenome | Rhizosphere |
| 64 | 3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Metagenome | Rhizosphere |
| 65 | 3300025711 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300025728 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300025735 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300025893 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300025900 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300025915 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300025916 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300025925 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300025927 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300025928 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300025931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300025935 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300025939 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 79 | 3300025960 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 80 | 3300025961 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 81 | 3300026023 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 82 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 83 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 84 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 85 | 3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 86 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 87 | 3300027111 | Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) | Metagenome | Nodule |
| 88 | 3300027312 | Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 89 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 90 | 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Metagenome | Rhizosphere |
| 91 | 3300029957 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG | Metagenome | Rhizosphere |
| 92 | 3300030500 | Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) | Metagenome | Rhizosphere |
| 93 | 3300031090 | Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 94 | 3300031247 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG | Metagenome | Rhizosphere |
| 95 | 3300031249 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG | Metagenome | Rhizosphere |
| 96 | 3300031344 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG | Metagenome | Rhizosphere |
| 97 | 3300031665 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 | Metagenome | Rhizosphere |
| 98 | 3300031711 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG | Metagenome | Rhizosphere |
| 99 | 3300031712 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG | Metagenome | Rhizosphere |
| 100 | 3300032133 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA | Metagenome | Rhizosphere |
| 101 | 3300032168 | Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 102 | 3300035083 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 | Metagenome | Rhizosphere |
| 103 | 3300035118 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 | Metagenome | Rhizosphere |
| 104 | 3300035172 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 | Metagenome | Rhizosphere |
| 105 | 3300035695 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 | Metagenome | Rhizosphere |
| 106 | 3300036401 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 107 | 3300036712 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA | Metagenome | Rhizosphere |
| 108 | 3300037068 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 109 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 110 | 3300038725 | Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 | Metagenome | Unclassified |
| 111 | 3300038726 | Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 | Metagenome | Unclassified |
| 112 | 3300041411 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 | Metagenome | Rhizosphere |
| 113 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 114 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 115 | 3300046459 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere | Metagenome | Rhizosphere |
| 116 | 3300046473 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere | Metagenome | Rhizosphere |
| 117 | 3300046475 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere | Metagenome | Rhizosphere |
| 118 | 3300046516 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere | Metagenome | Rhizosphere |
| 119 | 3300046525 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere | Metagenome | Rhizosphere |
| 120 | 3300046531 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere | Metagenome | Rhizosphere |
| 121 | 3300046558 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere | Metagenome | Rhizosphere |
| 122 | 3300046642 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere | Metagenome | Rhizosphere |
| 123 | 3300046663 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere | Metagenome | Rhizosphere |
| 124 | 3300046681 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere | Metagenome | Rhizosphere |
| 125 | 3300046683 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere | Metagenome | Rhizosphere |
| 126 | 3300047315 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere | Metagenome | Rhizosphere |
| 127 | 3300047322 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere | Metagenome | Rhizosphere |
| 128 | 3300047471 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere | Metagenome | Rhizosphere |
| 129 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 130 | 3300048910 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 | Metagenome | Rhizoplane |
| 131 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 132 | 3300048915 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 | Metagenome | Rhizoplane |
| 133 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 134 | 3300048918 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 | Metagenome | Rhizoplane |
| 135 | 3300048919 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled | Metagenome | Unclassified |
| 136 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 137 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 138 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 139 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 140 | 3300049575 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 141 | 3300049580 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 142 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 143 | 3300049582 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 144 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 145 | 3300049587 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 | Metagenome | Rhizosphere |
| 146 | 3300049588 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 | Metagenome | Rhizosphere |
| 147 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 148 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 149 | 3300053077 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere | Metagenome | Rhizosphere |
| 150 | 3300053085 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere | Metagenome | Rhizosphere |
| 151 | 640427133 | Stutzerimonas stutzeri A1501 | Isolate | Rhizosphere |
| 152 | 651053060 | Stutzerimonas stutzeri CMT.A.9 | Isolate | Rhizosphere |
| 153 | 8033232454 | Acinetobacter radioresistens SA188 | Isolate | Unclassified |
| 154 | 8055037949 | Leucobacter rhizosphaerae H25R-14 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 83.98 |
| Metatranscriptomes | 1.66 |
| Isolates | 14.36 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 0 |
| Nodule | 1.66 |
| Rhizoplane | 3.31 |
| Rhizosphere | 81.77 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 13.26 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0058692_1000003 | 3300003856 | Bacteria | 435295 |
| 2 | Ga0065703_1000246 | 3300005272 | Bacteria | 19185 |
| 3 | Ga0065704_10072799 | 3300005289 | Bacteria | 7989 |
| 4 | Ga0070670_100055940 | 3300005331 | Bacteria | 3386 |
| 5 | Ga0070666_10033288 | 3300005335 | Bacteria | 3409 |
| 6 | Ga0068868_100048205 | 3300005338 | Bacteria | 3341 |
| 7 | Ga0070661_100018109 | 3300005344 | Bacteria | 5005 |
| 8 | Ga0070671_100026893 | 3300005355 | Bacteria | 4733 |
| 9 | Ga0070673_100062658 | 3300005364 | Bacteria | 2955 |
| 10 | Ga0070688_100006226 | 3300005365 | Bacteria | 6359 |
| 11 | Ga0070667_100106791 | 3300005367 | Bacteria | 2423 |
| 12 | Ga0070709_10032158 | 3300005434 | Bacteria | 3162 |
| 13 | Ga0070713_100007459 | 3300005436 | Bacteria | 7681 |
| 14 | Ga0070711_100003554 | 3300005439 | Bacteria | 9095 |
| 15 | Ga0068853_100006491 | 3300005539 | Bacteria | 9305 |
| 16 | Ga0070665_100001784 | 3300005548 | Bacteria | 24519 |
| 17 | Ga0070665_100019025 | 3300005548 | Bacteria | 6889 |
| 18 | Ga0070665_100048380 | 3300005548 | Bacteria | 4270 |
| 19 | Ga0068855_100261730 | 3300005563 | Bacteria | 1926 |
| 20 | Ga0070664_100109054 | 3300005564 | Bacteria | 2414 |
| 21 | Ga0068859_100008875 | 3300005617 | Bacteria | 10149 |
| 22 | Ga0068864_100013126 | 3300005618 | Bacteria | 6860 |
| 23 | Ga0068863_100006175 | 3300005841 | Bacteria | 11751 |
| 24 | Ga0068863_100117982 | 3300005841 | Bacteria | 2529 |
| 25 | Ga0068858_100092358 | 3300005842 | Bacteria | 2817 |
| 26 | Ga0070715_10010729 | 3300006163 | Bacteria | 3275 |
| 27 | Ga0070712_100005143 | 3300006175 | Bacteria | 8097 |
| 28 | Ga0075428_100002765 | 3300006844 | Bacteria | 19109 |
| 29 | Ga0075433_10163543 | 3300006852 | Bacteria | 1981 |
| 30 | Ga0097620_100008875 | 3300006931 | Bacteria | 10149 |
| 31 | Ga0079104_1000051 | 3300006946 | Bacteria | 171217 |
| 32 | Ga0105244_10008253 | 3300009036 | Bacteria | 6520 |
| 33 | Ga0105244_10037014 | 3300009036 | Bacteria | 2553 |
| 34 | Ga0105250_10014504 | 3300009092 | Bacteria | 3237 |
| 35 | Ga0105245_10007193 | 3300009098 | Bacteria | 9752 |
| 36 | Ga0105245_10060989 | 3300009098 | Bacteria | 3398 |
| 37 | Ga0105245_10172316 | 3300009098 | Bacteria | 2062 |
| 38 | Ga0105247_10000287 | 3300009101 | Bacteria | 46031 |
| 39 | Ga0105247_10047853 | 3300009101 | Bacteria | 2627 |
| 40 | Ga0105243_10000005 | 3300009148 | Bacteria | 576265 |
| 41 | Ga0105243_10000314 | 3300009148 | Bacteria | 53404 |
| 42 | Ga0105248_10029331 | 3300009177 | Bacteria | 6137 |
| 43 | Ga0105249_10005032 | 3300009553 | Bacteria | 11398 |
| 44 | Ga0105239_10016424 | 3300010375 | Bacteria | 8184 |
| 45 | Ga0157371_10003745 | 3300013102 | Bacteria | 13613 |
| 46 | Ga0157370_10107993 | 3300013104 | Bacteria | 2603 |
| 47 | Ga0163163_10004930 | 3300014325 | Bacteria | 11481 |
| 48 | Ga0157379_10038434 | 3300014968 | Bacteria | 4270 |
| 49 | Ga0157376_10114280 | 3300014969 | Bacteria | 2382 |
| 50 | Ga0163161_10064606 | 3300017792 | Bacteria | 2670 |
| 51 | Ga0207696_1002644 | 3300025711 | Bacteria | 8641 |
| 52 | Ga0207655_1001734 | 3300025728 | Bacteria | 19136 |
| 53 | Ga0207655_1005798 | 3300025728 | Bacteria | 8314 |
| 54 | Ga0207655_1005855 | 3300025728 | Bacteria | 8249 |
| 55 | Ga0207655_1009528 | 3300025728 | Bacteria | 6017 |
| 56 | Ga0207713_1002148 | 3300025735 | Bacteria | 14669 |
| 57 | Ga0207682_10067966 | 3300025893 | Bacteria | 1505 |
| 58 | Ga0207710_10000215 | 3300025900 | Bacteria | 50960 |
| 59 | Ga0207710_10016013 | 3300025900 | Bacteria | 3172 |
| 60 | Ga0207693_10004538 | 3300025915 | Bacteria | 11723 |
| 61 | Ga0207663_10045721 | 3300025916 | Bacteria | 2694 |
| 62 | Ga0207650_10044356 | 3300025925 | Bacteria | 3268 |
| 63 | Ga0207687_10045052 | 3300025927 | Bacteria | 3048 |
| 64 | Ga0207687_10153324 | 3300025927 | Bacteria | 1760 |
| 65 | Ga0207700_10066294 | 3300025928 | Bacteria | 2759 |
| 66 | Ga0207644_10005452 | 3300025931 | Bacteria | 8287 |
| 67 | Ga0207709_10000001 | 3300025935 | Bacteria | 2228154 |
| 68 | Ga0207709_10000255 | 3300025935 | Bacteria | 63944 |
| 69 | Ga0207665_10013892 | 3300025939 | Bacteria | 5296 |
| 70 | Ga0207711_10005367 | 3300025941 | Bacteria | 10853 |
| 71 | Ga0207651_10010496 | 3300025960 | Bacteria | 5137 |
| 72 | Ga0207712_10083183 | 3300025961 | Bacteria | 2335 |
| 73 | Ga0207677_10000186 | 3300026023 | Bacteria | 49949 |
| 74 | Ga0207703_10035786 | 3300026035 | Bacteria | 3947 |
| 75 | Ga0207639_10006711 | 3300026041 | Bacteria | 7826 |
| 76 | Ga0207641_10245354 | 3300026088 | Bacteria | 1671 |
| 77 | Ga0207676_10003725 | 3300026095 | Bacteria | 10777 |
| 78 | Ga0207674_10002542 | 3300026116 | Bacteria | 22977 |
| 79 | Ga0209281_1000005 | 3300027111 | Bacteria | 1242284 |
| 80 | Ga0209371_1000006 | 3300027312 | Bacteria | 1055642 |
| 81 | Ga0268266_10005895 | 3300028379 | Bacteria | 11336 |
| 82 | Ga0268266_10012350 | 3300028379 | Bacteria | 7388 |
| 83 | Ga0265338_10010963 | 3300028800 | Bacteria | 10535 |
| 84 | Ga0265324_10033001 | 3300029957 | Bacteria | 1808 |
| 85 | Ga0268256_1000007 | 3300030500 | Bacteria | 1055326 |
| 86 | Ga0265760_10010520 | 3300031090 | Bacteria | 2642 |
| 87 | Ga0265340_10002719 | 3300031247 | Bacteria | 10068 |
| 88 | Ga0265339_10031906 | 3300031249 | Bacteria | 2974 |
| 89 | Ga0265316_10123397 | 3300031344 | Bacteria | 1955 |
| 90 | Ga0316575_10001794 | 3300031665 | Bacteria | 7037 |
| 91 | Ga0265314_10000943 | 3300031711 | Bacteria | 34205 |
| 92 | Ga0265314_10090547 | 3300031711 | Bacteria | 1992 |
| 93 | Ga0265342_10000943 | 3300031712 | Bacteria | 28942 |
| 94 | Ga0316583_10008483 | 3300032133 | Bacteria | 3707 |
| 95 | Ga0316593_10001998 | 3300032168 | Bacteria | 4702 |
| 96 | Ga0316593_10019119 | 3300032168 | Bacteria | 2114 |
| 97 | Ga0373926_0021242 | 3300035083 | Bacteria | 2246 |
| 98 | Ga0373954_0012414 | 3300035118 | Bacteria | 3787 |
| 99 | Ga0373955_0050373 | 3300035172 | Bacteria | 2264 |
| 100 | Ga0373927_0051636 | 3300035695 | Bacteria | 2658 |
| 101 | Ga0373937_0063128 | 3300036401 | Bacteria | 3406 |
| 102 | Ga0316584_0230120 | 3300036712 | Bacteria | 1359 |
| 103 | Ga0373925_0008165 | 3300037068 | Bacteria | 7620 |
| 104 | Ga0373925_0088598 | 3300037068 | Bacteria | 2363 |
| 105 | Ga0395901_0342653 | 3300038443 | Bacteria | 1544 |
| 106 | Ga0400484_39256 | 3300038725 | Bacteria | 8375 |
| 107 | Ga0400490_48940 | 3300038726 | Bacteria | 6217 |
| 108 | Ga0439466_0040040 | 3300041411 | Bacteria | 1568 |
| 109 | Ga0453684_0063811 | 3300044712 | Bacteria | 4709 |
| 110 | Ga0453684_0222860 | 3300044712 | Bacteria | 2183 |
| 111 | Ga0451576_0000340 | 3300045051 | Bacteria | 112415 |
| 112 | Ga0451576_0037344 | 3300045051 | Bacteria | 5146 |
| 113 | Ga0451576_0262521 | 3300045051 | Bacteria | 1805 |
| 114 | Ga0495629_0015113 | 3300046459 | Bacteria | 5549 |
| 115 | Ga0495582_0003454 | 3300046473 | Bacteria | 8906 |
| 116 | Ga0495639_0059207 | 3300046475 | Bacteria | 1753 |
| 117 | Ga0495628_0157858 | 3300046516 | Bacteria | 1725 |
| 118 | Ga0495663_0028254 | 3300046525 | Bacteria | 1649 |
| 119 | Ga0495665_0011568 | 3300046531 | Bacteria | 4777 |
| 120 | Ga0495633_0052134 | 3300046558 | Bacteria | 1928 |
| 121 | Ga0495634_0058169 | 3300046642 | Bacteria | 2578 |
| 122 | Ga0495635_0007285 | 3300046663 | Bacteria | 7729 |
| 123 | Ga0495647_0006406 | 3300046681 | Bacteria | 3895 |
| 124 | Ga0495658_0017750 | 3300046683 | Bacteria | 3683 |
| 125 | Ga0495581_0027948 | 3300047315 | Bacteria | 3271 |
| 126 | Ga0495680_0013582 | 3300047322 | Bacteria | 7097 |
| 127 | Ga0495684_0047460 | 3300047471 | Bacteria | 3284 |
| 128 | Ga0496104_0010696 | 3300048907 | Bacteria | 8204 |
| 129 | Ga0496107_0097249 | 3300048910 | Bacteria | 2155 |
| 130 | Ga0496109_0026216 | 3300048912 | Bacteria | 5197 |
| 131 | Ga0496112_0014117 | 3300048915 | Bacteria | 7397 |
| 132 | Ga0496114_0126883 | 3300048917 | Bacteria | 2200 |
| 133 | Ga0496115_0070114 | 3300048918 | Bacteria | 2841 |
| 134 | Ga0496116_0003972 | 3300048919 | Unclassified | 14364 |
| 135 | Ga0496122_0012725 | 3300048925 | Bacteria | 8329 |
| 136 | Ga0496122_0023639 | 3300048925 | Bacteria | 5406 |
| 137 | Ga0496125_0000710 | 3300048928 | Bacteria | 55020 |
| 138 | Ga0496125_0046641 | 3300048928 | Bacteria | 3634 |
| 139 | Ga0496126_0003369 | 3300048929 | Unclassified | 20264 |
| 140 | Ga0501034_0016164 | 3300049571 | Bacteria | 7655 |
| 141 | Ga0501034_0071195 | 3300049571 | Bacteria | 3487 |
| 142 | Ga0501039_0056177 | 3300049575 | Bacteria | 3049 |
| 143 | Ga0501046_0096787 | 3300049580 | Bacteria | 2267 |
| 144 | Ga0501047_0027067 | 3300049581 | Bacteria | 5523 |
| 145 | Ga0501047_0198726 | 3300049581 | Bacteria | 1866 |
| 146 | Ga0501048_0015788 | 3300049582 | Bacteria | 5573 |
| 147 | Ga0501048_0103137 | 3300049582 | Bacteria | 2013 |
| 148 | Ga0501070_0000390 | 3300049586 | Bacteria | 40336 |
| 149 | Ga0501071_0087404 | 3300049587 | Bacteria | 2287 |
| 150 | Ga0501072_0076717 | 3300049588 | Bacteria | 2644 |
| 151 | Ga0501035_0283441 | 3300049822 | Bacteria | 1400 |
| 152 | Ga0501044_0072672 | 3300049823 | Bacteria | 3497 |
| 153 | Ga0495601_0189826 | 3300053077 | Bacteria | 1343 |
| 154 | Ga0495619_0060845 | 3300053085 | Bacteria | 2511 |
| 155 | Ga0495619_0092059 | 3300053085 | Bacteria | 2053 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300049582 | Ga0501048_0103137 | Ga0501048_0103137_440_1525 | 334 |
| 2 | iso_pu_bacteria | 2836160341 | 2836165785 | 368 |
| 3 | 3300009553 | Ga0105249_10005032 | Ga0105249_1000503210 | 369 |
| 4 | 3300036712 | Ga0316584_0230120 | Ga0316584_0230120_12_1139 | 372 |
| 5 | 3300048917 | Ga0496114_0126883 | Ga0496114_0126883_13_1140 | 372 |
| 6 | 3300049580 | Ga0501046_0096787 | Ga0501046_0096787_325_1449 | 372 |
| 7 | 3300049581 | Ga0501047_0198726 | Ga0501047_0198726_440_1564 | 372 |
| 8 | 3300049586 | Ga0501070_0000390 | Ga0501070_0000390_12507_13631 | 372 |
| 9 | 3300006852 | Ga0075433_10163543 | Ga0075433_101635432 | 375 |
| 10 | 3300038725 | Ga0400484_39256 | Ga0400484_39256_4505_5677 | 385 |
| 11 | 3300038726 | Ga0400490_48940 | Ga0400490_48940_2068_3240 | 385 |
| 12 | 3300009148 | Ga0105243_10000314 | Ga0105243_1000031437 | 392 |
| 13 | 3300005344 | Ga0070661_100018109 | Ga0070661_1000181092 | 393 |
| 14 | iso_pu_bacteria | 3001889506 | 3001890666 | 393 |
| 15 | 3300014969 | Ga0157376_10114280 | Ga0157376_101142802 | 395 |
| 16 | 3300038443 | Ga0395901_0342653 | Ga0395901_0342653_215_1429 | 395 |
| 17 | 3300048910 | Ga0496107_0097249 | Ga0496107_0097249_324_1550 | 395 |
| 18 | iso_pu_bacteria | 2932422444 | 2932422938 | 396 |
| 19 | iso_pu_bacteria | 2551306352 | 2552749251 | 397 |
| 20 | iso_pu_bacteria | 2639762793 | 2640734196 | 397 |
| 21 | iso_pu_bacteria | 2643221665 | 2644361743 | 397 |
| 22 | iso_pu_bacteria | 2675903507 | 2678231169 | 397 |
| 23 | iso_pu_bacteria | 2728369097 | 2729148247 | 397 |
| 24 | iso_pu_bacteria | 2744054655 | 2745160015 | 397 |
| 25 | iso_pu_bacteria | 2773857761 | 2774388277 | 397 |
| 26 | iso_pu_bacteria | 2773857770 | 2774437484 | 397 |
| 27 | iso_pu_bacteria | 2894023352 | 2894023358 | 397 |
| 28 | iso_pu_bacteria | 2919182534 | 2919184085 | 397 |
| 29 | iso_pu_bacteria | 2928515477 | 2928517129 | 397 |
| 30 | iso_pu_bacteria | 640427133 | 640487695 | 397 |
| 31 | iso_pu_bacteria | 651053060 | 651175628 | 397 |
| 32 | iso_pu_bacteria | 8033232454 | 8033234461 | 397 |
| 33 | 3300005548 | Ga0070665_100001784 | Ga0070665_10000178415 | 398 |
| 34 | 3300028379 | Ga0268266_10005895 | Ga0268266_100058956 | 398 |
| 35 | 3300044712 | Ga0453684_0222860 | Ga0453684_0222860_728_1924 | 398 |
| 36 | iso_pu_bacteria | 2721755523 | 2722883768 | 398 |
| 37 | iso_pu_bacteria | 2839138175 | 2839138915 | 398 |
| 38 | iso_pu_bacteria | 8055037949 | 8055038684 | 398 |
| 39 | 3300025893 | Ga0207682_10067966 | Ga0207682_100679662 | 399 |
| 40 | 3300025935 | Ga0207709_10000255 | Ga0207709_1000025550 | 399 |
| 41 | 3300025961 | Ga0207712_10083183 | Ga0207712_100831832 | 399 |
| 42 | 3300032133 | Ga0316583_10008483 | Ga0316583_100084834 | 399 |
| 43 | 3300032168 | Ga0316593_10001998 | Ga0316593_100019985 | 399 |
| 44 | 3300032168 | Ga0316593_10019119 | Ga0316593_100191192 | 399 |
| 45 | 3300045051 | Ga0451576_0000340 | Ga0451576_0000340_58368_59567 | 399 |
| 46 | 3300045051 | Ga0451576_0262521 | Ga0451576_0262521_462_1664 | 399 |
| 47 | 3300046516 | Ga0495628_0157858 | Ga0495628_0157858_197_1411 | 399 |
| 48 | 3300049822 | Ga0501035_0283441 | Ga0501035_0283441_159_1364 | 399 |
| 49 | 3300049823 | Ga0501044_0072672 | Ga0501044_0072672_1168_2373 | 399 |
| 50 | 3300053077 | Ga0495601_0189826 | Ga0495601_0189826_41_1255 | 399 |
| 51 | iso_pu_bacteria | 2671180531 | 2673161293 | 399 |
| 52 | 3300006844 | Ga0075428_100002765 | Ga0075428_1000027653 | 400 |
| 53 | 3300031344 | Ga0265316_10123397 | Ga0265316_101233972 | 400 |
| 54 | 3300031711 | Ga0265314_10000943 | Ga0265314_100009436 | 400 |
| 55 | 3300045051 | Ga0451576_0037344 | Ga0451576_0037344_3137_4339 | 400 |
| 56 | 3300003856 | Ga0058692_1000003 | Ga0058692_1000003223 | 401 |
| 57 | 3300005272 | Ga0065703_1000246 | Ga0065703_100024611 | 401 |
| 58 | 3300005289 | Ga0065704_10072799 | Ga0065704_100727995 | 401 |
| 59 | 3300005331 | Ga0070670_100055940 | Ga0070670_1000559402 | 401 |
| 60 | 3300005335 | Ga0070666_10033288 | Ga0070666_100332882 | 401 |
| 61 | 3300005338 | Ga0068868_100048205 | Ga0068868_1000482052 | 401 |
| 62 | 3300005355 | Ga0070671_100026893 | Ga0070671_1000268934 | 401 |
| 63 | 3300005364 | Ga0070673_100062658 | Ga0070673_1000626583 | 401 |
| 64 | 3300005365 | Ga0070688_100006226 | Ga0070688_1000062264 | 401 |
| 65 | 3300005367 | Ga0070667_100106791 | Ga0070667_1001067912 | 401 |
| 66 | 3300005434 | Ga0070709_10032158 | Ga0070709_100321583 | 401 |
| 67 | 3300005436 | Ga0070713_100007459 | Ga0070713_1000074595 | 401 |
| 68 | 3300005439 | Ga0070711_100003554 | Ga0070711_1000035544 | 401 |
| 69 | 3300005539 | Ga0068853_100006491 | Ga0068853_1000064914 | 401 |
| 70 | 3300005548 | Ga0070665_100019025 | Ga0070665_1000190254 | 401 |
| 71 | 3300005548 | Ga0070665_100048380 | Ga0070665_1000483804 | 401 |
| 72 | 3300005563 | Ga0068855_100261730 | Ga0068855_1002617302 | 401 |
| 73 | 3300005564 | Ga0070664_100109054 | Ga0070664_1001090542 | 401 |
| 74 | 3300005617 | Ga0068859_100008875 | Ga0068859_1000088757 | 401 |
| 75 | 3300005618 | Ga0068864_100013126 | Ga0068864_1000131265 | 401 |
| 76 | 3300005841 | Ga0068863_100006175 | Ga0068863_1000061756 | 401 |
| 77 | 3300005841 | Ga0068863_100117982 | Ga0068863_1001179822 | 401 |
| 78 | 3300005842 | Ga0068858_100092358 | Ga0068858_1000923582 | 401 |
| 79 | 3300006163 | Ga0070715_10010729 | Ga0070715_100107293 | 401 |
| 80 | 3300006175 | Ga0070712_100005143 | Ga0070712_1000051432 | 401 |
| 81 | 3300006931 | Ga0097620_100008875 | Ga0097620_1000088757 | 401 |
| 82 | 3300006946 | Ga0079104_1000051 | Ga0079104_100005175 | 401 |
| 83 | 3300009036 | Ga0105244_10008253 | Ga0105244_100082536 | 401 |
| 84 | 3300009036 | Ga0105244_10037014 | Ga0105244_100370142 | 401 |
| 85 | 3300009092 | Ga0105250_10014504 | Ga0105250_100145043 | 401 |
| 86 | 3300009098 | Ga0105245_10007193 | Ga0105245_100071937 | 401 |
| 87 | 3300009098 | Ga0105245_10060989 | Ga0105245_100609893 | 401 |
| 88 | 3300009098 | Ga0105245_10172316 | Ga0105245_101723162 | 401 |
| 89 | 3300009101 | Ga0105247_10000287 | Ga0105247_1000028720 | 401 |
| 90 | 3300009101 | Ga0105247_10047853 | Ga0105247_100478532 | 401 |
| 91 | 3300009148 | Ga0105243_10000005 | Ga0105243_10000005290 | 401 |
| 92 | 3300009177 | Ga0105248_10029331 | Ga0105248_100293312 | 401 |
| 93 | 3300010375 | Ga0105239_10016424 | Ga0105239_100164242 | 401 |
| 94 | 3300013102 | Ga0157371_10003745 | Ga0157371_100037452 | 401 |
| 95 | 3300013104 | Ga0157370_10107993 | Ga0157370_101079931 | 401 |
| 96 | 3300014325 | Ga0163163_10004930 | Ga0163163_100049303 | 401 |
| 97 | 3300014968 | Ga0157379_10038434 | Ga0157379_100384343 | 401 |
| 98 | 3300017792 | Ga0163161_10064606 | Ga0163161_100646061 | 401 |
| 99 | 3300025711 | Ga0207696_1002644 | Ga0207696_10026447 | 401 |
| 100 | 3300025728 | Ga0207655_1001734 | Ga0207655_100173414 | 401 |
| 101 | 3300025728 | Ga0207655_1005798 | Ga0207655_100579811 | 401 |
| 102 | 3300025728 | Ga0207655_1005855 | Ga0207655_100585511 | 401 |
| 103 | 3300025728 | Ga0207655_1009528 | Ga0207655_10095287 | 401 |
| 104 | 3300025735 | Ga0207713_1002148 | Ga0207713_10021487 | 401 |
| 105 | 3300025900 | Ga0207710_10000215 | Ga0207710_1000021540 | 401 |
| 106 | 3300025900 | Ga0207710_10016013 | Ga0207710_100160132 | 401 |
| 107 | 3300025915 | Ga0207693_10004538 | Ga0207693_100045384 | 401 |
| 108 | 3300025916 | Ga0207663_10045721 | Ga0207663_100457212 | 401 |
| 109 | 3300025925 | Ga0207650_10044356 | Ga0207650_100443564 | 401 |
| 110 | 3300025927 | Ga0207687_10045052 | Ga0207687_100450522 | 401 |
| 111 | 3300025927 | Ga0207687_10153324 | Ga0207687_101533242 | 401 |
| 112 | 3300025928 | Ga0207700_10066294 | Ga0207700_100662942 | 401 |
| 113 | 3300025931 | Ga0207644_10005452 | Ga0207644_100054525 | 401 |
| 114 | 3300025935 | Ga0207709_10000001 | Ga0207709_100000011137 | 401 |
| 115 | 3300025939 | Ga0207665_10013892 | Ga0207665_100138924 | 401 |
| 116 | 3300025941 | Ga0207711_10005367 | Ga0207711_100053672 | 401 |
| 117 | 3300025960 | Ga0207651_10010496 | Ga0207651_100104965 | 401 |
| 118 | 3300026023 | Ga0207677_10000186 | Ga0207677_1000018654 | 401 |
| 119 | 3300026035 | Ga0207703_10035786 | Ga0207703_100357863 | 401 |
| 120 | 3300026041 | Ga0207639_10006711 | Ga0207639_100067115 | 401 |
| 121 | 3300026088 | Ga0207641_10245354 | Ga0207641_102453541 | 401 |
| 122 | 3300026095 | Ga0207676_10003725 | Ga0207676_100037255 | 401 |
| 123 | 3300026116 | Ga0207674_10002542 | Ga0207674_100025425 | 401 |
| 124 | 3300027111 | Ga0209281_1000005 | Ga0209281_10000051036 | 401 |
| 125 | 3300027312 | Ga0209371_1000006 | Ga0209371_1000006282 | 401 |
| 126 | 3300028379 | Ga0268266_10012350 | Ga0268266_100123506 | 401 |
| 127 | 3300028800 | Ga0265338_10010963 | Ga0265338_100109637 | 401 |
| 128 | 3300029957 | Ga0265324_10033001 | Ga0265324_100330011 | 401 |
| 129 | 3300030500 | Ga0268256_1000007 | Ga0268256_1000007282 | 401 |
| 130 | 3300031090 | Ga0265760_10010520 | Ga0265760_100105202 | 401 |
| 131 | 3300031247 | Ga0265340_10002719 | Ga0265340_100027198 | 401 |
| 132 | 3300031249 | Ga0265339_10031906 | Ga0265339_100319062 | 401 |
| 133 | 3300031665 | Ga0316575_10001794 | Ga0316575_100017942 | 401 |
| 134 | 3300031711 | Ga0265314_10090547 | Ga0265314_100905472 | 401 |
| 135 | 3300031712 | Ga0265342_10000943 | Ga0265342_100009437 | 401 |
| 136 | 3300035083 | Ga0373926_0021242 | Ga0373926_0021242_338_1582 | 401 |
| 137 | 3300035118 | Ga0373954_0012414 | Ga0373954_0012414_549_1793 | 401 |
| 138 | 3300035172 | Ga0373955_0050373 | Ga0373955_0050373_885_2129 | 401 |
| 139 | 3300035695 | Ga0373927_0051636 | Ga0373927_0051636_569_1813 | 401 |
| 140 | 3300036401 | Ga0373937_0063128 | Ga0373937_0063128_1140_2384 | 401 |
| 141 | 3300037068 | Ga0373925_0008165 | Ga0373925_0008165_1591_2835 | 401 |
| 142 | 3300037068 | Ga0373925_0088598 | Ga0373925_0088598_688_1932 | 401 |
| 143 | 3300041411 | Ga0439466_0040040 | Ga0439466_0040040_126_1343 | 401 |
| 144 | 3300044712 | Ga0453684_0063811 | Ga0453684_0063811_1868_3088 | 401 |
| 145 | 3300046459 | Ga0495629_0015113 | Ga0495629_0015113_3286_4530 | 401 |
| 146 | 3300046473 | Ga0495582_0003454 | Ga0495582_0003454_1532_2776 | 401 |
| 147 | 3300046475 | Ga0495639_0059207 | Ga0495639_0059207_429_1673 | 401 |
| 148 | 3300046525 | Ga0495663_0028254 | Ga0495663_0028254_172_1377 | 401 |
| 149 | 3300046531 | Ga0495665_0011568 | Ga0495665_0011568_2615_3859 | 401 |
| 150 | 3300046558 | Ga0495633_0052134 | Ga0495633_0052134_584_1858 | 401 |
| 151 | 3300046642 | Ga0495634_0058169 | Ga0495634_0058169_1092_2336 | 401 |
| 152 | 3300046663 | Ga0495635_0007285 | Ga0495635_0007285_4603_5847 | 401 |
| 153 | 3300046681 | Ga0495647_0006406 | Ga0495647_0006406_2440_3684 | 401 |
| 154 | 3300046683 | Ga0495658_0017750 | Ga0495658_0017750_2412_3656 | 401 |
| 155 | 3300047315 | Ga0495581_0027948 | Ga0495581_0027948_1726_2970 | 401 |
| 156 | 3300047322 | Ga0495680_0013582 | Ga0495680_0013582_2871_4115 | 401 |
| 157 | 3300047471 | Ga0495684_0047460 | Ga0495684_0047460_1883_3127 | 401 |
| 158 | 3300048907 | Ga0496104_0010696 | Ga0496104_0010696_5691_6935 | 401 |
| 159 | 3300048912 | Ga0496109_0026216 | Ga0496109_0026216_1659_2903 | 401 |
| 160 | 3300048915 | Ga0496112_0014117 | Ga0496112_0014117_5074_6318 | 401 |
| 161 | 3300048918 | Ga0496115_0070114 | Ga0496115_0070114_1006_2331 | 401 |
| 162 | 3300048919 | Ga0496116_0003972 | Ga0496116_0003972_1579_2853 | 401 |
| 163 | 3300048925 | Ga0496122_0012725 | Ga0496122_0012725_4713_5987 | 401 |
| 164 | 3300048925 | Ga0496122_0023639 | Ga0496122_0023639_2732_3940 | 401 |
| 165 | 3300048928 | Ga0496125_0000710 | Ga0496125_0000710_36297_37505 | 401 |
| 166 | 3300048928 | Ga0496125_0046641 | Ga0496125_0046641_1014_2288 | 401 |
| 167 | 3300048929 | Ga0496126_0003369 | Ga0496126_0003369_7163_8437 | 401 |
| 168 | 3300049571 | Ga0501034_0016164 | Ga0501034_0016164_3461_4678 | 401 |
| 169 | 3300049571 | Ga0501034_0071195 | Ga0501034_0071195_1542_2756 | 401 |
| 170 | 3300049575 | Ga0501039_0056177 | Ga0501039_0056177_246_1472 | 401 |
| 171 | 3300049581 | Ga0501047_0027067 | Ga0501047_0027067_276_1493 | 401 |
| 172 | 3300049582 | Ga0501048_0015788 | Ga0501048_0015788_217_1443 | 401 |
| 173 | 3300049587 | Ga0501071_0087404 | Ga0501071_0087404_810_2036 | 401 |
| 174 | 3300049588 | Ga0501072_0076717 | Ga0501072_0076717_507_1733 | 401 |
| 175 | 3300053085 | Ga0495619_0060845 | Ga0495619_0060845_970_2193 | 401 |
| 176 | 3300053085 | Ga0495619_0092059 | Ga0495619_0092059_744_1988 | 401 |
| 177 | iso_pu_bacteria | 2687453257 | 2688066325 | 401 |
| 178 | iso_pu_bacteria | 2687453341 | 2688394521 | 401 |
| 179 | iso_pu_bacteria | 2857479173 | 2857481117 | 401 |
| 180 | iso_pu_bacteria | 2857632687 | 2857632751 | 401 |
| 181 | iso_pu_bacteria | 2870804320 | 2870805794 | 401 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 6am8-assembly2.cif.gz_D | engineered tryptophan synthase b-subunit from pyrococcus furiosus, pftrpb2b9 with trp bound as e(aex2) | 0.9884 | 16 | 397 |
| 6cuz-assembly1.cif.gz_B | engineered trpb from pyrococcus furiosus, pftrpb7e6 with (2s,3r)-ethylserine bound as the amino-acrylate | 0.9882 | 16 | 397 |
| 6am9-assembly2.cif.gz_D | engineered tryptophan synthase b-subunit from pyrococcus furiosus, pftrpb2b9, with ser-bound in a predominantly closed state. | 0.9881 | 16 | 398 |
| 6cut-assembly1.cif.gz_A | engineered holo trpb from pyrococcus furiosus, pftrpb7e6 with (2s,3s)-isopropylserine bound as the external aldimine | 0.988 | 16 | 398 |
| 5vm5-assembly2.cif.gz_D | engineered tryptophan synthase b-subunit from pyrococcus furiosus, pftrpb2b9, with ser bound | 0.9869 | 16 | 398 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_Q60179_217_401_3.40.50.1100 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; | 0.9918 | 216 | 399 | 3.40.50.1100 |
| af_Q60179_69_392_3.40.50.1100 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; | 0.9918 | 66 | 391 | 3.40.50.1100 |
| 5ixjD02 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; | 0.9904 | 62 | 399 | 3.40.50.1100 |
| af_Q60179_69_392_3.40.50.1100 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; | 0.9888 | 66 | 391 | 3.40.50.1100 |
| af_P43283_44_197_3.60.21.10 | Alpha Beta;4-Layer Sandwich;Purple Acid Phosphatase; chain A, domain 2;Metallo-dependent phosphatases | 0.9867 | 61 | 208 | 3.60.21.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A333WGU6-F1-model_v4 | Tryptophan synthase beta chain (EC 4.2.1.20) | 0.9976 | 33 | 401 |
GO:0004834
GO:0005737 GO:0006568 |
| AF-A0A533IH34-F1-model_v4 | deleted | 0.9962 | 194 | 400 |
|
| AF-A0A4S4JFB9-F1-model_v4 | deleted | 0.9958 | 10 | 401 |
|
| AF-A0A6B3IFD7-F1-model_v4 | Tryptophan synthase subunit beta (EC 4.2.1.20) | 0.995 | 245 | 357 |
GO:0004834
GO:0005737 |
| AF-A0A333WGU6-F1-model_v4 | Tryptophan synthase beta chain (EC 4.2.1.20) | 0.9949 | 33 | 401 |
GO:0004834
GO:0005737 GO:0006568 |
Predicted Structure (AlphaFold2)
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