F278253

General Info

Members Datasets Scaffolds Average Seq Length
181 147 362 449

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2832004796|2832006690
Length 488
Sequence HRSAPEPGGVVLRPAAPDGRSAGSAASAAIRPDGGAGRGWTPTRALGRAVLLTGLLLVTAVLLGRVDLVVLAAPFALGTAYALRRRPTEQPQVLIGAEEGQLVEGGELTGTISVGNLDPVPYDVAVLRTRVSPWLRVERATFAGGPVGGRGGTDGRPAVADRPFVTSVAPQTAVDLELGGTALRWGRHPIGPAGARVAAAQGLLVSRVVIAEPVRSKVYPKTEPFEAVEAMPRAAGLVGAHHSRRPGEGGELAGVRVFAPGDRLRRIDWRVSLRTRQLHVASTLSDRDAEVVVLLDVLAEAGRSGGIAGTASVLDTTVRAAAAIAEHYLHRGDRVALLEYGPSARRLRPATGRRQYLTVLEWLLEVKAQPFPQAVDDQAFGPQLLSPDALVVVLTPLLQERSAQMLARMARSGRFVVAVDTLPADLPSPKERGWAEVAYRLWRLDRDTMIMQLREHGVPVVPWVGAGSLDQVLRDVARLATAPRVGNR

Samples

Sample ID Description Type Environment
1 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
4 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
5 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
6 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
7 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
8 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
9 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
10 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
11 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
12 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
13 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
14 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
15 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
16 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
17 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
18 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
19 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
20 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
21 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
22 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
23 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
24 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
25 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
26 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
27 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
28 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
29 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
30 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
31 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
32 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
33 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
34 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
35 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
36 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
37 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
38 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
39 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
61 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
62 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
63 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
64 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
65 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
66 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
67 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
68 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
69 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
70 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
71 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
72 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
73 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
74 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
75 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
76 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
77 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
78 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
79 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
80 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
81 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
82 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
83 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
84 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
85 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
86 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
87 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
88 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
89 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
90 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
91 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
92 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
93 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
94 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
95 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
96 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
97 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
98 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
99 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
100 2832004796 Micromonospora endophytica JCM 18317 Isolate Unclassified
101 2501939600 Micromonospora sp. L5 Isolate Unclassified
102 2515154088 Salinispora arenicola CNT800 Isolate Rhizosphere
103 2515154129 Salinispora pacifica CNS103 Isolate Rhizosphere
104 2515154137 Salinispora arenicola CNX482 Isolate Rhizosphere
105 2515154202 Salinispora pacifica CNT084 Isolate Rhizosphere
106 2515154203 Salinispora arenicola CNR921 Isolate Rhizosphere
107 2622736626 Micromonospora rhizosphaerae DSM 45431 Isolate Rhizosphere
108 2675903059 Asanoa hainanensis CGMCC 4.5593 Isolate Rhizosphere
109 2751185782 Actinoplanes subtropicus NRRL B-24665 Isolate Rhizosphere
110 2772190715 Micromonospora chokoriensis NRRL B-24750 Isolate Unclassified
111 2831935698 Jishengella sp. AZ1-13 Isolate Unclassified
112 2855670206 Micromonospora noduli Lupac 07 Isolate Nodule
113 2855676851 Micromonospora saelicesensis GAR05 Isolate Unclassified
114 2855683550 Micromonospora sp. RP3T Isolate Unclassified
115 2856858025 Micromonospora aurantiaca 110B(2018) Isolate Unclassified
116 2857288857 Micromonospora noduli ONO23 Isolate Unclassified
117 2858848962 Micromonospora saelicesensis GAR06 Isolate Unclassified
118 2858868258 Micromonospora sp. MH33 Isolate Unclassified
119 2858882152 Micromonospora noduli MED15 Isolate Nodule
120 2858888857 Micromonospora saelicesensis Lupac 06 Isolate Unclassified
121 2858895516 Micromonospora saelicesensis PSN13 Isolate Unclassified
122 2858902515 Micromonospora sp. MW-13 Isolate Rhizosphere
123 2861520306 Phytomonospora endophytica DSM 45386 Isolate Unclassified
124 2866065130 Micromonospora endophytica DSM 45430 Isolate Unclassified
125 2867302475 Micromonospora globbae WPS1-2 Isolate Unclassified
126 2867312974 Micromonospora musae NGC1-4 Isolate Unclassified
127 2867319477 Micromonospora musae MS1-9 Isolate Unclassified
128 2867507094 Micromonospora zingiberis PLAI 1-1 Isolate Unclassified
129 2869048445 Micromonospora saelicesensis PSN01 Isolate Unclassified
130 2869061728 Micromonospora noduli ONO86 Isolate Unclassified
131 2869068681 Micromonospora noduli GUI43 Isolate Unclassified
132 2880489317 Micromonospora ureilytica DSM 101692 Isolate Unclassified
133 2880495981 Micromonospora vinacea DSM 101695 Isolate Unclassified
134 2887478801 Catellatospora paridis NEAU-CL2 Isolate Rhizosphere
135 2902582711 Micromonospora sp. AP08 Isolate Unclassified
136 2929219909 Micromonospora sp. R-75348 Hybrid assembly Isolate Unclassified
137 2929226422 Micromonospora sp. R-74116 Hybrid assembly Isolate Unclassified
138 2996221748 Micromonospora veneta CAP181 Isolate Unclassified
139 649633069 Micromonospora sp. L5 Isolate Unclassified
140 8001781756 Catellatospora tritici NEAU-YM18 Isolate Rhizosphere
141 8003856774 Micromonospora echinofusca MPMI6 Isolate Unclassified
142 8003870546 Micromonospora tarensis STR1s_6 Isolate Rhizosphere
143 8054704163 Micromonospora trifolii NIE79 Isolate Nodule
144 8054727385 Micromonospora alfalfae MED01 Isolate Nodule
145 8054734606 Micromonospora hortensis NIE111 Isolate Nodule
146 8055412473 Micromonospora phytophila DSM 105363 Isolate Nodule
147 8057568493 Actinorhabdospora filicis NBRC 111898 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 72.93
Metatranscriptomes 0.55
Isolates 26.52

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.1
Nodule 3.31
Rhizoplane 2.76
Rhizosphere 70.17
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10001863 3300003203 Bacteria 9898
2 Ga0070683_100041877 3300005329 Bacteria 4216
3 Ga0068869_100068834 3300005334 Bacteria 2616
4 Ga0068868_100001404 3300005338 Bacteria 16594
5 Ga0070661_100025277 3300005344 Bacteria 4267
6 Ga0070661_100051426 3300005344 Bacteria 3016
7 Ga0070692_10017562 3300005345 Bacteria 3424
8 Ga0070668_100022737 3300005347 Bacteria 4740
9 Ga0070675_100040823 3300005354 Bacteria 3789
10 Ga0070659_100020985 3300005366 Bacteria 4968
11 Ga0070667_100111414 3300005367 Bacteria 2374
12 Ga0070700_100016122 3300005441 Bacteria 4252
13 Ga0070663_100017215 3300005455 Bacteria 4712
14 Ga0070662_100024643 3300005457 Bacteria 4147
15 Ga0070679_100040335 3300005530 Bacteria 4645
16 Ga0070684_100035615 3300005535 Bacteria 4261
17 Ga0070665_100047195 3300005548 Bacteria 4324
18 Ga0070665_100082080 3300005548 Bacteria 3229
19 Ga0070664_100073081 3300005564 Bacteria 2941
20 Ga0070664_100194484 3300005564 Bacteria 1808
21 Ga0068857_100014172 3300005577 Bacteria 6942
22 Ga0068857_100069452 3300005577 Bacteria 3137
23 Ga0070702_100055047 3300005615 Bacteria 2292
24 Ga0068852_100082119 3300005616 Bacteria 2863
25 Ga0068859_100043342 3300005617 Bacteria 4522
26 Ga0068861_100022799 3300005719 Bacteria 4514
27 Ga0068863_100003978 3300005841 Bacteria 14593
28 Ga0068863_100087294 3300005841 Bacteria 2956
29 Ga0068858_100157078 3300005842 Bacteria 2140
30 Ga0068862_100131855 3300005844 Bacteria 2211
31 Ga0068862_100156470 3300005844 Bacteria 2032
32 Ga0081540_1004116 3300005983 Bacteria 11229
33 Ga0081539_10000330 3300005985 Bacteria 105062
34 Ga0081539_10002057 3300005985 Bacteria 30168
35 Ga0081539_10003875 3300005985 Bacteria 17479
36 Ga0081539_10005969 3300005985 Bacteria 11997
37 Ga0081539_10009297 3300005985 Bacteria 8252
38 Ga0075428_100000490 3300006844 Bacteria 39945
39 Ga0075428_100076428 3300006844 Bacteria 3656
40 Ga0075428_100086115 3300006844 Bacteria 3427
41 Ga0075430_100027375 3300006846 Bacteria 4844
42 Ga0075431_100004662 3300006847 Bacteria 13470
43 Ga0075429_100000469 3300006880 Bacteria 30122
44 Ga0097620_100043342 3300006931 Bacteria 4522
45 Ga0111539_10020029 3300009094 Bacteria 8242
46 Ga0105245_10030180 3300009098 Bacteria 4793
47 Ga0114129_10000544 3300009147 Bacteria 46212
48 Ga0114129_10001891 3300009147 Bacteria 28562
49 Ga0114129_10139255 3300009147 Bacteria 3328
50 Ga0114129_10429908 3300009147 Bacteria 1735
51 Ga0157369_10019044 3300013105 Bacteria 7686
52 Ga0163163_10035539 3300014325 Bacteria 4834
53 Ga0206353_10874790 3300020082 Bacteria 4351
54 Ga0207645_10034053 3300025907 Bacteria 3273
55 Ga0207707_10047392 3300025912 Bacteria 3742
56 Ga0207660_10028989 3300025917 Bacteria 3792
57 Ga0207687_10134566 3300025927 Bacteria 1868
58 Ga0207690_10042226 3300025932 Bacteria 2994
59 Ga0207706_10054336 3300025933 Bacteria 3534
60 Ga0207689_10104639 3300025942 Bacteria 2325
61 Ga0207661_10059822 3300025944 Bacteria 3071
62 Ga0207661_10066753 3300025944 Bacteria 2923
63 Ga0207679_10019206 3300025945 Bacteria 4589
64 Ga0207668_10001415 3300025972 Bacteria 14117
65 Ga0207677_10025926 3300026023 Bacteria 3666
66 Ga0207678_10030742 3300026067 Bacteria 4688
67 Ga0207708_10000673 3300026075 Bacteria 26177
68 Ga0207641_10023055 3300026088 Bacteria 5128
69 Ga0207676_10013985 3300026095 Bacteria 5762
70 Ga0207676_10170942 3300026095 Bacteria 1894
71 Ga0207674_10020830 3300026116 Bacteria 7077
72 Ga0207674_10067789 3300026116 Bacteria 3592
73 Ga0207675_100045746 3300026118 Bacteria 4089
74 Ga0207683_10242294 3300026121 Bacteria 1645
75 Ga0207698_10019688 3300026142 Bacteria 4626
76 Ga0268266_10135018 3300028379 Bacteria 2209
77 Ga0268264_10068001 3300028381 Bacteria 3009
78 Ga0307515_10001363 3300028794 Bacteria 55232
79 Ga0307515_10075860 3300028794 Bacteria 4470
80 Ga0307512_10000643 3300030522 Bacteria 51630
81 Ga0307512_10002888 3300030522 Bacteria 20863
82 Ga0307513_10027440 3300031456 Bacteria 6538
83 Ga0307513_10029941 3300031456 Bacteria 6192
84 Ga0307513_10122008 3300031456 Bacteria 2571
85 Ga0307509_10021913 3300031507 Bacteria 7216
86 Ga0307508_10000927 3300031616 Bacteria 34076
87 Ga0307508_10002793 3300031616 Bacteria 18158
88 Ga0307516_10005997 3300031730 Bacteria 14361
89 Ga0307516_10020176 3300031730 Bacteria 6891
90 Ga0307405_10057531 3300031731 Bacteria 2443
91 Ga0307410_10067052 3300031852 Bacteria 2475
92 Ga0307407_10028443 3300031903 Bacteria 2988
93 Ga0307409_100007961 3300031995 Bacteria 6385
94 Ga0307409_100011751 3300031995 Bacteria 5541
95 Ga0307416_100009211 3300032002 Bacteria 6444
96 Ga0307414_10098389 3300032004 Bacteria 2195
97 Ga0307415_100009427 3300032126 Bacteria 5471
98 Ga0307415_100064378 3300032126 Bacteria 2551
99 Ga0307415_100084109 3300032126 Bacteria 2282
100 Ga0307415_100089148 3300032126 Bacteria 2227
101 Ga0307415_100120056 3300032126 Bacteria 1969
102 Ga0373951_0000018 3300035091 Bacteria 65924
103 Ga0373953_0012924 3300035117 Bacteria 2969
104 Ga0373942_0001780 3300035207 Bacteria 5457
105 Ga0373962_0002492 3300035242 Bacteria 4375
106 Ga0373937_0085438 3300036401 Bacteria 2920
107 Ga0395898_0016280 3300037466 Bacteria 7610
108 Ga0395905_0120745 3300037471 Bacteria 2463
109 Ga0395901_0108676 3300038443 Bacteria 2911
110 Ga0466967_0043096 3300045976 Bacteria 3906
111 Ga0495629_0150722 3300046459 Bacteria 1616
112 Ga0495638_0110217 3300046460 Bacteria 1635
113 Ga0495594_0028616 3300046499 Bacteria 3008
114 Ga0495606_0000885 3300046507 Bacteria 44794
115 Ga0495668_0000620 3300046616 Bacteria 42969
116 Ga0495625_0008268 3300046660 Bacteria 8897
117 Ga0495683_0024018 3300047323 Bacteria 3131
118 Ga0495626_0000113 3300048091 Bacteria 105218
119 Ga0496104_0166255 3300048907 Bacteria 2116
120 Ga0496108_0000016 3300048911 Bacteria 237051
121 Ga0496112_0006306 3300048915 Bacteria 10409
122 Ga0496112_0112932 3300048915 Bacteria 2687
123 Ga0496112_0253836 3300048915 Bacteria 1709
124 Ga0501047_0033243 3300049581 Bacteria 4978
125 nmdc:mga05p37_105231_c1 3300050507 Bacteria 3472
126 nmdc:mga06r32_11526_c1 3300050510 Bacteria 7964
127 nmdc:mga06r32_164785_c1 3300050510 Bacteria 2199
128 nmdc:mga06r32_170489_c1 3300050510 Bacteria 2160
129 nmdc:mga06r32_40452_c1 3300050510 Bacteria 4426
130 nmdc:mga08y16_1543_c1 3300050511 Bacteria 23189
131 Ga0500646_0000108 3300053090 Bacteria 23661
132 Ga0500588_0000403 3300053146 Bacteria 6774
133 Ga0530510_0027773 3300061734 Bacteria 4055
134 2832006690 2832004796 Bacteria 6538017
135 2501943555 2501939600 Bacteria 6907073
136 2515493734 2515154088 Bacteria 5526283
137 2515720509 2515154129 Bacteria 5584369
138 2515755123 2515154137 Bacteria 5711575
139 2516084078 2515154202 Bacteria 5471270
140 2516087734 2515154203 Bacteria 5458536
141 2623586657 2622736626 Bacteria 7181580
142 2676480313 2675903059 Bacteria 8644972
143 2753265319 2751185782 Bacteria 11227053
144 2772641865 2772190715 Bacteria 6959372
145 2831940529 2831935698 Bacteria 5963223
146 2855671542 2855670206 Bacteria 7120389
147 2855680561 2855676851 Bacteria 7063653
148 2855688457 2855683550 Bacteria 7134265
149 2856860575 2856858025 Bacteria 7255264
150 2857292238 2857288857 Bacteria 7189066
151 2858853427 2858848962 Bacteria 6963058
152 2858874260 2858868258 Bacteria 7683772
153 2858883605 2858882152 Bacteria 7230291
154 2858890549 2858888857 Bacteria 7060307
155 2858901178 2858895516 Bacteria 7378898
156 2858907595 2858902515 Bacteria 7086037
157 2861524705 2861520306 Bacteria 8348283
158 2866065693 2866065130 Bacteria 6518152
159 2867304022 2867302475 Bacteria 7087181
160 2867313135 2867312974 Bacteria 7058875
161 2867324726 2867319477 Bacteria 7069771
162 2867509519 2867507094 Bacteria 6506033
163 2869048644 2869048445 Bacteria 6875584
164 2869063402 2869061728 Bacteria 7112407
165 2869070323 2869068681 Bacteria 7205615
166 2880493549 2880489317 Bacteria 7096270
167 2880498778 2880495981 Bacteria 7340502
168 2887485866 2887478801 Bacteria 8972725
169 2902586168 2902582711 Bacteria 6187705
170 2929220780 2929219909 Bacteria 6984360
171 2929227356 2929226422 Bacteria 7248583
172 2996227138 2996221748 Bacteria 6799777
173 649811312 649633069 Bacteria 6962533
174 8001784997 8001781756 Bacteria 9586736
175 8003859045 8003856774 Bacteria 7675274
176 8003871488 8003870546 Bacteria 7396674
177 8054707022 8054704163 Bacteria 7247792
178 8054727637 8054727385 Bacteria 7558670
179 8054740263 8054734606 Bacteria 6947278
180 8055419043 8055412473 Bacteria 6257500
181 8057569706 8057568493 Bacteria 7221719
182 JGI25406J46586_10001863
183 Ga0070683_100041877
184 Ga0068869_100068834
185 Ga0068868_100001404
186 Ga0070661_100025277
187 Ga0070661_100051426
188 Ga0070692_10017562
189 Ga0070668_100022737
190 Ga0070675_100040823
191 Ga0070659_100020985
192 Ga0070667_100111414
193 Ga0070700_100016122
194 Ga0070663_100017215
195 Ga0070662_100024643
196 Ga0070679_100040335
197 Ga0070684_100035615
198 Ga0070665_100047195
199 Ga0070665_100082080
200 Ga0070664_100073081
201 Ga0070664_100194484
202 Ga0068857_100014172
203 Ga0068857_100069452
204 Ga0070702_100055047
205 Ga0068852_100082119
206 Ga0068859_100043342
207 Ga0068861_100022799
208 Ga0068863_100003978
209 Ga0068863_100087294
210 Ga0068858_100157078
211 Ga0068862_100131855
212 Ga0068862_100156470
213 Ga0081540_1004116
214 Ga0081539_10000330
215 Ga0081539_10002057
216 Ga0081539_10003875
217 Ga0081539_10005969
218 Ga0081539_10009297
219 Ga0075428_100000490
220 Ga0075428_100076428
221 Ga0075428_100086115
222 Ga0075430_100027375
223 Ga0075431_100004662
224 Ga0075429_100000469
225 Ga0097620_100043342
226 Ga0111539_10020029
227 Ga0105245_10030180
228 Ga0114129_10000544
229 Ga0114129_10001891
230 Ga0114129_10139255
231 Ga0114129_10429908
232 Ga0157369_10019044
233 Ga0163163_10035539
234 Ga0206353_10874790
235 Ga0207645_10034053
236 Ga0207707_10047392
237 Ga0207660_10028989
238 Ga0207687_10134566
239 Ga0207690_10042226
240 Ga0207706_10054336
241 Ga0207689_10104639
242 Ga0207661_10059822
243 Ga0207661_10066753
244 Ga0207679_10019206
245 Ga0207668_10001415
246 Ga0207677_10025926
247 Ga0207678_10030742
248 Ga0207708_10000673
249 Ga0207641_10023055
250 Ga0207676_10013985
251 Ga0207676_10170942
252 Ga0207674_10020830
253 Ga0207674_10067789
254 Ga0207675_100045746
255 Ga0207683_10242294
256 Ga0207698_10019688
257 Ga0268266_10135018
258 Ga0268264_10068001
259 Ga0307515_10001363
260 Ga0307515_10075860
261 Ga0307512_10000643
262 Ga0307512_10002888
263 Ga0307513_10027440
264 Ga0307513_10029941
265 Ga0307513_10122008
266 Ga0307509_10021913
267 Ga0307508_10000927
268 Ga0307508_10002793
269 Ga0307516_10005997
270 Ga0307516_10020176
271 Ga0307405_10057531
272 Ga0307410_10067052
273 Ga0307407_10028443
274 Ga0307409_100007961
275 Ga0307409_100011751
276 Ga0307416_100009211
277 Ga0307414_10098389
278 Ga0307415_100009427
279 Ga0307415_100064378
280 Ga0307415_100084109
281 Ga0307415_100089148
282 Ga0307415_100120056
283 Ga0373951_0000018
284 Ga0373953_0012924
285 Ga0373942_0001780
286 Ga0373962_0002492
287 Ga0373937_0085438
288 Ga0395898_0016280
289 Ga0395905_0120745
290 Ga0395901_0108676
291 Ga0466967_0043096
292 Ga0495629_0150722
293 Ga0495638_0110217
294 Ga0495594_0028616
295 Ga0495606_0000885
296 Ga0495668_0000620
297 Ga0495625_0008268
298 Ga0495683_0024018
299 Ga0495626_0000113
300 Ga0496104_0166255
301 Ga0496108_0000016
302 Ga0496112_0006306
303 Ga0496112_0112932
304 Ga0496112_0253836
305 Ga0501047_0033243
306 nmdc:mga05p37_105231_c1
307 nmdc:mga06r32_11526_c1
308 nmdc:mga06r32_164785_c1
309 nmdc:mga06r32_170489_c1
310 nmdc:mga06r32_40452_c1
311 nmdc:mga08y16_1543_c1
312 Ga0500646_0000108
313 Ga0500588_0000403
314 Ga0530510_0027773
315 2832006690
316 2501943555
317 2515493734
318 2515720509
319 2515755123
320 2516084078
321 2516087734
322 2623586657
323 2676480313
324 2753265319
325 2772641865
326 2831940529
327 2855671542
328 2855680561
329 2855688457
330 2856860575
331 2857292238
332 2858853427
333 2858874260
334 2858883605
335 2858890549
336 2858901178
337 2858907595
338 2861524705
339 2866065693
340 2867304022
341 2867313135
342 2867324726
343 2867509519
344 2869048644
345 2869063402
346 2869070323
347 2880493549
348 2880498778
349 2887485866
350 2902586168
351 2929220780
352 2929227356
353 2996227138
354 649811312
355 8001784997
356 8003859045
357 8003871488
358 8054707022
359 8054727637
360 8054740263
361 8055419043
362 8057569706

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01882

DUF58

Protein of unknown function DUF58

249

337

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
8b6l-assembly1.cif.gz_F subtomogram average of the human sec61-trap-osta-translocon 0.8415 74 184
8b5l-assembly1.cif.gz_v cryo-em structure of ribosome-sec61-trap (translocon associated protein) translocon complex 0.836 74 184
7b2m-assembly1.cif.gz_B cryo-em structure of complement c4b in complex with nanobody e3 0.7974 77 187
7b2q-assembly1.cif.gz_B cryo-em structure of complement c4b in complex with nanobody b12 0.7935 77 182
4kty-assembly2.cif.gz_B fibrin-stabilizing factor with a bound ligand 0.7912 75 187
ID Description Score Start End Superfamily
af_Q4D1A2_978_1070_2.60.40.10 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.8553 76 163 2.60.40.10
af_Q4DE16_989_1083_2.60.40.10 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.8405 87 163 2.60.40.10
3klsA09 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.8211 79 184 2.60.40.10
af_A4HUB1_833_917_2.60.40.10 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.8178 76 159 2.60.40.10
3klsB08 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.8139 79 161 2.60.40.10
ID Description Score Start End GO Terms
AF-A0A3L6JNV9-F1-model_v4 DUF11 domain-containing protein 0.8572 75 187 GO:0016020
AF-A0A847GAW8-F1-model_v4 LPXTG cell wall anchor domain-containing protein 0.8385 75 146 GO:0016020
AF-Q5JEE2-F1-model_v4 Hypothetical membrane protein, conserved 0.8305 75 184 GO:0016020
AF-A0A538MYW3-F1-model_v4 DUF58 domain-containing protein 0.8229 46 452
AF-A0A505DHY1-F1-model_v4 Ricin B lectin domain-containing protein 0.8218 75 184 GO:0005975
GO:0016231

Map