F278247

General Info

Members Datasets Scaffolds Average Seq Length
181 156 136 677

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2808606982|2811846930
Length 733
Sequence HKEQQRPRKGVAHFVCGRRSKWVVVVLWLAVIMLAFPLASKLTDAQDNDAASWLPGSAESTQVLEESKGFRPEVIPAVVVYARDSGLTPADRLQISENVAAIKQLRDHGVRGNETRGPVLDRTVDPRAAQVFVPITMDEKGWARIAPAVDSIRDVTGTGGAGLAVHITGPGGTAADFSEAFEGIDSTLLMSTLAVVVIILLITYRSPTLLLVPVISVIGALAAAEALIYLLARHADLTVNGQSAGILTVLVFGAGTDYALLLVARYREELRRHEDRHEAMALALHRAGPAVLASGATVVLGMLVLLAAEMNSTSGLGPVAAIGVAVALVSMLTLFPALLVIFGRWIFWPAIPHLGTPEPTERGFWARTGQRIAGRPRATWGITAVILAAFALGLTQLRAEGISNAEAFTGEPDSIVGQTVQAKYFPAGSGDPLVVIANAPQARRVGETVATTPGVVPQSIGVPLGTRPFNDGRVLFEATMSDPADSQAARATVERIRDAVHAVPDADARVGGGTAAVLDADTATTRDNYVIIPLVLAVVLLVLTLLLRALIAPLLLIGTVVLSFAAALGLSALAFRYIFDYAGESTDFPLFVFVFLVALGIDYNIFLTTRIREEARRQGTRPGVLTGLAATGAVITSAGLVLAGTFAALGTLPMVAFAEIGFAVALGVLLDTLVVRSVLVTGLFLDVGPKIWWPHRLAREDEPRPPAPAVAGSAVSGGAVSGGGSSAKKPEDP

Samples

Sample ID Description Type Environment
1 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
2 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
3 2643221647 Streptomyces sp. Root369 Isolate Unclassified
4 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
5 2643221682 Streptomyces sp. Root1319 Isolate Unclassified
6 2643221714 Streptomyces sp. Root264 Isolate Unclassified
7 2784746763 Streptomyces ossamyceticus SAI-001 Isolate Unclassified
8 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
9 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
10 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
11 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
12 2808606982 Streptomyces sp. SLBN-118 Isolate Unclassified
13 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
14 2811994917 Streptomyces sp. SLBN-134 Isolate Unclassified
15 2852635781 Streptomyces sp. AK010 Isolate Rhizosphere
16 2856741275 Microbispora triticiradicis NEAU-HRDPA2-9 Isolate Unclassified
17 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
18 2862382967 Streptomyces scabiei NRRL B-2795 Isolate Nodule
19 2863404153 Streptomyces scabiei SAI-025 (Annotation) (version 2) Isolate Unclassified
20 2867428634 Streptomyces sp. RP5T Isolate Unclassified
21 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
22 2880495981 Micromonospora vinacea DSM 101695 Isolate Unclassified
23 2891562705 Microbispora tritici MT50 Isolate Unclassified
24 2899359706 Amycolatopsis anabasis EGI 650086 Isolate Unclassified
25 2919468124 Streptomyces sp. 3330 Isolate Rhizosphere
26 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
27 2946072368 Streptomyces achromogenes W4I19-2 Isolate Rhizosphere
28 2947224130 Streptomyces afghaniensis W1I20 Isolate Rhizosphere
29 2954002825 Streptomyces turgidiscabies W2I16 Isolate Rhizosphere
30 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
31 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
32 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
33 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
34 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
35 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
36 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
37 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
38 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
39 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
40 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
41 2990059506 Streptomyces sp. CAP261 Isolate Unclassified
42 3006321560 Actinacidiphila epipremni PRB2-1 Isolate Unclassified
43 3006493962 Streptomyces grisecoloratus TRM S81-3 Isolate Rhizosphere
44 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
45 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
46 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
47 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
48 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
49 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
50 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
51 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
52 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
53 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
54 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
55 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
56 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
57 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
58 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
59 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
60 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
61 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
62 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
63 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
64 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
65 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
66 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
67 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
68 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
69 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
70 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
71 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
72 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
73 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
74 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
75 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
76 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
77 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
91 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
92 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
93 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
94 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
95 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
96 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
97 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
98 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
99 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
100 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
101 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
102 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
103 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
104 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
105 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
106 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
107 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
108 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
109 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
110 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
111 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
112 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
113 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
114 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
115 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
116 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
117 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
118 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
119 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
120 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
121 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
122 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
123 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
124 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
125 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
126 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
127 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
128 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
129 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
130 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
131 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
132 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
133 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
134 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
135 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
136 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
137 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
138 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
139 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
140 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
141 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
142 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
143 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
144 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
145 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
146 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
147 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
148 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
149 3300053137 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 endosphere Metagenome Endosphere
150 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
151 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
152 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
153 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
154 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
155 8008558824 Streptomyces scabiei NRRL B-2795 Isolate Nodule
156 8048406513 Streptomyces heilongjiangensis NEAU-W2 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 74.59
Metatranscriptomes 0.55
Isolates 24.86

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.52
Nodule 1.1
Rhizoplane 1.1
Rhizosphere 72.93
Stem 0
Stem Tuber 0
Unclassified 19.34

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10008137 3300003203 Bacteria 4760
2 rootH2_10061513 3300003320 Bacteria 2675
3 Ga0006562J51391_1129326 3300003578 Bacteria 5160
4 Ga0070658_10000084 3300005327 Bacteria 88205
5 Ga0070658_10000358 3300005327 Bacteria 39704
6 Ga0070673_100000281 3300005364 Bacteria 26376
7 Ga0070678_100001509 3300005456 Bacteria 12429
8 Ga0070681_10000300 3300005458 Bacteria 40207
9 Ga0068867_100022969 3300005459 Bacteria 4463
10 Ga0070685_10002110 3300005466 Bacteria 10271
11 Ga0070706_100072594 3300005467 Bacteria 3185
12 Ga0070698_100023901 3300005471 Bacteria 6380
13 Ga0070679_100000330 3300005530 Bacteria 40207
14 Ga0070679_100093189 3300005530 Bacteria 3000
15 Ga0081539_10000419 3300005985 Bacteria 90362
16 Ga0075363_100005628 3300006048 Bacteria 5600
17 Ga0075428_100000349 3300006844 Bacteria 45877
18 Ga0075430_100052244 3300006846 Bacteria 3442
19 Ga0075431_100032165 3300006847 Bacteria 5406
20 Ga0075434_100040472 3300006871 Bacteria 4614
21 Ga0075429_100025870 3300006880 Bacteria 5095
22 Ga0105240_10000003 3300009093 Bacteria 1183681
23 Ga0105245_10000093 3300009098 Bacteria 86866
24 Ga0114129_10000492 3300009147 Bacteria 47848
25 Ga0105243_10000001 3300009148 Bacteria 1156578
26 Ga0105241_10000557 3300009174 Bacteria 28152
27 Ga0105242_10000002 3300009176 Bacteria 262559
28 Ga0105239_10006152 3300010375 Bacteria 13967
29 Ga0105239_10177862 3300010375 Unclassified 2380
30 Ga0157374_10000225 3300013296 Bacteria 52365
31 Ga0157374_10044571 3300013296 Unclassified 4100
32 Ga0157378_10009433 3300013297 Bacteria 8506
33 Ga0163162_10025016 3300013306 Bacteria 5898
34 Ga0157375_10075070 3300013308 Bacteria 3404
35 Ga0157377_10006526 3300014745 Bacteria 5570
36 Ga0182007_10000683 3300015262 Bacteria 19451
37 Ga0183367_1014 3300015688 Bacteria 330534
38 Ga0183367_1017 3300015688 Bacteria 126691
39 Ga0207705_10000136 3300025909 Bacteria 79294
40 Ga0207705_10000267 3300025909 Bacteria 50025
41 Ga0207684_10017144 3300025910 Bacteria 6216
42 Ga0207654_10000614 3300025911 Bacteria 20104
43 Ga0207707_10000087 3300025912 Bacteria 93123
44 Ga0207707_10082862 3300025912 Bacteria 2800
45 Ga0207695_10000005 3300025913 Bacteria 1196715
46 Ga0207671_10015272 3300025914 Bacteria 6027
47 Ga0207660_10000778 3300025917 Bacteria 21194
48 Ga0207652_10000169 3300025921 Bacteria 70284
49 Ga0207687_10000127 3300025927 Bacteria 51055
50 Ga0207686_10000001 3300025934 Bacteria 1169580
51 Ga0207709_10000002 3300025935 Bacteria 1171536
52 Ga0207651_10000182 3300025960 Bacteria 27344
53 Ga0268266_10029636 3300028379 Bacteria 4651
54 Ga0307517_10005028 3300028786 Bacteria 20110
55 Ga0307515_10065347 3300028794 Bacteria 5065
56 Ga0307511_10040277 3300030521 Bacteria 3972
57 Ga0307512_10044459 3300030522 Bacteria 3651
58 Ga0307513_10011364 3300031456 Bacteria 11071
59 Ga0307513_10077979 3300031456 Bacteria 3428
60 Ga0307509_10072737 3300031507 Bacteria 3581
61 Ga0307508_10008075 3300031616 Bacteria 9759
62 Ga0307516_10056872 3300031730 Bacteria 3812
63 Ga0307510_10121369 3300033180 Bacteria 2317
64 Ga0373953_0002895 3300035117 Bacteria 5241
65 Ga0439436_0007849 3300041404 Bacteria 3278
66 Ga0439436_0010307 3300041404 Bacteria 2852
67 Ga0439439_0000743 3300041406 Bacteria 5861
68 Ga0451791_0234621 3300041451 Bacteria 3945
69 Ga0451853_2547244 3300041512 Bacteria 6430
70 Ga0439433_0003425 3300041999 Bacteria 3402
71 Ga0439449_0001366 3300042007 Bacteria 9548
72 Ga0439449_0005940 3300042007 Bacteria 4662
73 Ga0439457_000222 3300042014 Bacteria 15221
74 Ga0439457_002824 3300042014 Bacteria 4850
75 Ga0450903_000123 3300042138 Bacteria 16808
76 Ga0439458_0000169 3300042157 Bacteria 14717
77 Ga0466960_0006102 3300044901 Bacteria 4819
78 Ga0495629_0006330 3300046459 Bacteria 8779
79 Ga0495643_0002947 3300046522 Bacteria 12891
80 Ga0495658_0008681 3300046683 Bacteria 5046
81 Ga0495670_0009187 3300046691 Bacteria 4861
82 Ga0495589_0024604 3300046794 Bacteria 3060
83 Ga0495685_002543 3300047447 Bacteria 5729
84 Ga0495681_0002560 3300047470 Bacteria 12946
85 Ga0496109_0000324 3300048912 Bacteria 44591
86 Ga0501031_0003503 3300049568 Bacteria 10070
87 Ga0501032_0001581 3300049569 Bacteria 18150
88 Ga0501032_0023248 3300049569 Bacteria 4288
89 Ga0501033_0026593 3300049570 Bacteria 4353
90 Ga0501033_0033567 3300049570 Bacteria 3853
91 Ga0501034_0015943 3300049571 Bacteria 7713
92 Ga0501034_0023401 3300049571 Bacteria 6295
93 Ga0501034_0030852 3300049571 Bacteria 5447
94 Ga0501036_0039259 3300049572 Bacteria 4006
95 Ga0501037_0009694 3300049573 Bacteria 7068
96 Ga0501038_0007419 3300049574 Bacteria 10117
97 Ga0501038_0012985 3300049574 Bacteria 7598
98 Ga0501038_0048788 3300049574 Bacteria 3663
99 Ga0501043_0034168 3300049579 Bacteria 3999
100 Ga0501043_0068418 3300049579 Bacteria 2788
101 Ga0501046_0005643 3300049580 Bacteria 11168
102 Ga0501047_0000182 3300049581 Bacteria 76846
103 Ga0501047_0007314 3300049581 Bacteria 10383
104 Ga0501047_0014297 3300049581 Bacteria 7548
105 Ga0501047_0040403 3300049581 Bacteria 4511
106 Ga0501047_0110952 3300049581 Bacteria 2625
107 Ga0501047_0117386 3300049581 Bacteria 2542
108 Ga0501067_0000587 3300049583 Bacteria 19598
109 Ga0501069_0008324 3300049585 Bacteria 5447
110 Ga0501071_0000025 3300049587 Bacteria 49332
111 Ga0501073_0054856 3300049589 Bacteria 2789
112 Ga0501074_0022568 3300049590 Bacteria 4573
113 Ga0501076_0004341 3300049592 Bacteria 10064
114 Ga0501077_0004118 3300049593 Bacteria 8780
115 Ga0501080_0093583 3300049742 Bacteria 2790
116 Ga0501035_0001653 3300049822 Bacteria 22528
117 Ga0501035_0013021 3300049822 Bacteria 7676
118 Ga0501044_0022400 3300049823 Bacteria 6732
119 Ga0501044_0022950 3300049823 Bacteria 6642
120 nmdc:mga03n38_5617_c1 3300050490 Bacteria 4287
121 nmdc:mga07m45_5669_c1 3300050496 Bacteria 6241
122 nmdc:mga05p37_10686_c1 3300050507 Bacteria 10895
123 nmdc:mga09592_6590_c1 3300050508 Bacteria 9457
124 nmdc:mga0qj67_22_c3 3300050509 Bacteria 58549
125 nmdc:mga06r32_851_c3 3300050510 Bacteria 22324
126 nmdc:mga0n895_38706_c1 3300050512 Bacteria 4622
127 nmdc:mga0rr50_55708_c1 3300050513 Bacteria 2951
128 Ga0500578_0032080 3300053086 Bacteria 3377
129 Ga0500652_000953 3300053131 Bacteria 9557
130 Ga0500658_0001450 3300053134 Bacteria 9473
131 Ga0500561_0000346 3300053137 Bacteria 7747
132 Ga0500573_0011240 3300053140 Bacteria 5011
133 Ga0500616_0023529 3300053153 Bacteria 3430
134 Ga0500634_0015646 3300053161 Bacteria 4033
135 Ga0501084_0018735 3300054114 Bacteria 5763
136 Ga0501082_0035946 3300060353 Bacteria 4268

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049587 Ga0501071_0000025 Ga0501071_0000025_47029_49101 567
2 3300049581 Ga0501047_0110952 Ga0501047_0110952_380_2500 571
3 3300049581 Ga0501047_0000182 Ga0501047_0000182_29774_31954 573
4 3300049574 Ga0501038_0048788 Ga0501038_0048788_160_2253 574
5 3300049579 Ga0501043_0034168 Ga0501043_0034168_1747_3840 574
6 3300049589 Ga0501073_0054856 Ga0501073_0054856_537_2630 574
7 3300049742 Ga0501080_0093583 Ga0501080_0093583_409_2502 574
8 3300060353 Ga0501082_0035946 Ga0501082_0035946_454_2547 574
9 3300005459 Ga0068867_100022969 Ga0068867_1000229693 575
10 3300009093 Ga0105240_10000003 Ga0105240_100000031240 575
11 3300009098 Ga0105245_10000093 Ga0105245_1000009333 575
12 3300009148 Ga0105243_10000001 Ga0105243_1000000139 575
13 3300009176 Ga0105242_10000002 Ga0105242_10000002243 575
14 3300010375 Ga0105239_10006152 Ga0105239_100061525 575
15 3300013306 Ga0163162_10025016 Ga0163162_100250163 575
16 3300025913 Ga0207695_10000005 Ga0207695_100000051251 575
17 3300025914 Ga0207671_10015272 Ga0207671_100152726 575
18 3300025927 Ga0207687_10000127 Ga0207687_1000012733 575
19 3300025934 Ga0207686_10000001 Ga0207686_100000011105 575
20 3300025935 Ga0207709_10000002 Ga0207709_100000021222 575
21 3300005467 Ga0070706_100072594 Ga0070706_1000725943 576
22 3300005471 Ga0070698_100023901 Ga0070698_1000239015 576
23 3300025910 Ga0207684_10017144 Ga0207684_100171446 576
24 3300013296 Ga0157374_10000225 Ga0157374_1000022557 577
25 3300014745 Ga0157377_10006526 Ga0157377_100065264 577
26 3300049568 Ga0501031_0003503 Ga0501031_0003503_3476_5809 577
27 3300049569 Ga0501032_0001581 Ga0501032_0001581_14407_16740 577
28 3300049571 Ga0501034_0030852 Ga0501034_0030852_1704_4037 577
29 3300049573 Ga0501037_0009694 Ga0501037_0009694_3325_5658 577
30 3300049580 Ga0501046_0005643 Ga0501046_0005643_1953_4286 577
31 3300049581 Ga0501047_0007314 Ga0501047_0007314_6778_9111 577
32 3300049583 Ga0501067_0000587 Ga0501067_0000587_1601_3934 577
33 3300049585 Ga0501069_0008324 Ga0501069_0008324_1411_3744 577
34 3300049590 Ga0501074_0022568 Ga0501074_0022568_537_2870 577
35 3300049592 Ga0501076_0004341 Ga0501076_0004341_1647_3980 577
36 3300049593 Ga0501077_0004118 Ga0501077_0004118_2932_5265 577
37 3300049822 Ga0501035_0001653 Ga0501035_0001653_1563_3896 577
38 3300054114 Ga0501084_0018735 Ga0501084_0018735_1727_4060 577
39 3300003578 Ga0006562J51391_1129326 Ga0006562J51391_11293262 579
40 3300048912 Ga0496109_0000324 Ga0496109_0000324_23136_25400 579
41 3300042007 Ga0439449_0005940 Ga0439449_0005940_934_3078 580
42 3300049581 Ga0501047_0117386 Ga0501047_0117386_112_2295 580
43 3300049823 Ga0501044_0022950 Ga0501044_0022950_1639_3822 580
44 3300028794 Ga0307515_10065347 Ga0307515_100653472 581
45 3300031456 Ga0307513_10011364 Ga0307513_100113644 581
46 3300049822 Ga0501035_0013021 Ga0501035_0013021_4914_7112 581
47 3300042138 Ga0450903_000123 Ga0450903_000123_13534_15612 582
48 3300042157 Ga0439458_0000169 Ga0439458_0000169_5560_7638 582
49 iso_pu_bacteria 2899359706 2899367503 582
50 3300005327 Ga0070658_10000084 Ga0070658_1000008488 584
51 3300025909 Ga0207705_10000267 Ga0207705_1000026748 584
52 3300009174 Ga0105241_10000557 Ga0105241_100005573 586
53 3300013308 Ga0157375_10075070 Ga0157375_100750703 586
54 3300025911 Ga0207654_10000614 Ga0207654_100006143 586
55 3300044901 Ga0466960_0006102 Ga0466960_0006102_542_2680 587
56 3300005327 Ga0070658_10000358 Ga0070658_1000035819 588
57 3300005364 Ga0070673_100000281 Ga0070673_10000028110 588
58 3300005456 Ga0070678_100001509 Ga0070678_1000015099 588
59 3300005466 Ga0070685_10002110 Ga0070685_100021105 588
60 3300010375 Ga0105239_10177862 Ga0105239_101778621 588
61 3300013296 Ga0157374_10044571 Ga0157374_100445712 588
62 3300025909 Ga0207705_10000136 Ga0207705_1000013660 588
63 3300025960 Ga0207651_10000182 Ga0207651_1000018210 588
64 3300028379 Ga0268266_10029636 Ga0268266_100296363 588
65 3300035117 Ga0373953_0002895 Ga0373953_0002895_457_2565 588
66 iso_pu_bacteria 2856741275 2856743668 588
67 iso_pu_bacteria 2891562705 2891562941 588
68 3300041404 Ga0439436_0007849 Ga0439436_0007849_580_2697 589
69 3300042014 Ga0439457_002824 Ga0439457_002824_1468_3585 589
70 3300006844 Ga0075428_100000349 Ga0075428_10000034934 590
71 3300006846 Ga0075430_100052244 Ga0075430_1000522442 590
72 iso_pu_bacteria 3006321560 3006328052 590
73 3300050496 nmdc:mga07m45_5669_c1 nmdc:mga07m45_5669_c1_3763_5874 591
74 iso_pu_bacteria 2880495981 2880501668 591
75 3300003320 rootH2_10061513 rootH2_100615131 592
76 3300005458 Ga0070681_10000300 Ga0070681_1000030023 592
77 3300005530 Ga0070679_100000330 Ga0070679_1000003307 592
78 3300025912 Ga0207707_10000087 Ga0207707_1000008736 592
79 3300025917 Ga0207660_10000778 Ga0207660_1000077813 592
80 3300025921 Ga0207652_10000169 Ga0207652_100001698 592
81 3300049570 Ga0501033_0026593 Ga0501033_0026593_2112_4238 592
82 3300049579 Ga0501043_0068418 Ga0501043_0068418_345_2471 592
83 iso_pu_bacteria 8048406513 8048408129 592
84 3300013297 Ga0157378_10009433 Ga0157378_100094331 593
85 3300025912 Ga0207707_10082862 Ga0207707_100828622 593
86 3300031507 Ga0307509_10072737 Ga0307509_100727372 593
87 3300046459 Ga0495629_0006330 Ga0495629_0006330_6171_8465 593
88 iso_pu_bacteria 2643221682 2644459639 593
89 3300006847 Ga0075431_100032165 Ga0075431_1000321653 594
90 3300006880 Ga0075429_100025870 Ga0075429_1000258703 594
91 3300041404 Ga0439436_0010307 Ga0439436_0010307_215_2356 594
92 3300041406 Ga0439439_0000743 Ga0439439_0000743_340_2481 594
93 3300041451 Ga0451791_0234621 Ga0451791_0234621_975_3077 594
94 3300041999 Ga0439433_0003425 Ga0439433_0003425_464_2599 594
95 3300042007 Ga0439449_0001366 Ga0439449_0001366_216_2351 594
96 3300042014 Ga0439457_000222 Ga0439457_000222_1982_4123 594
97 iso_pu_bacteria 2784746763 2785345774 594
98 3300033180 Ga0307510_10121369 Ga0307510_101213691 595
99 iso_pu_bacteria 3006493962 3006495116 595
100 3300049571 Ga0501034_0023401 Ga0501034_0023401_750_2933 596
101 3300049574 Ga0501038_0007419 Ga0501038_0007419_2549_4732 596
102 3300049581 Ga0501047_0040403 Ga0501047_0040403_1333_3516 596
103 iso_pu_bacteria 2811994879 2812360354 596
104 iso_pu_bacteria 2811994917 2812482454 596
105 iso_pu_bacteria 2852635781 2852637675 596
106 iso_pu_bacteria 2946064051 2946065534 596
107 iso_pu_bacteria 2947224130 2947231875 596
108 iso_pu_bacteria 2954002825 2954011109 596
109 3300046691 Ga0495670_0009187 Ga0495670_0009187_2010_4130 598
110 iso_pu_bacteria 2582581313 2585303492 598
111 iso_pu_bacteria 2643221647 2644267983 598
112 iso_pu_bacteria 2643221678 2644443657 598
113 iso_pu_bacteria 2643221714 2644632417 598
114 iso_pu_bacteria 2784746768 2785367114 598
115 iso_pu_bacteria 2786546132 2786668163 598
116 iso_pu_bacteria 2808606359 2808847619 598
117 iso_pu_bacteria 2862281513 2862289701 598
118 iso_pu_bacteria 2862382967 2862390381 598
119 iso_pu_bacteria 2863404153 2863407009 598
120 iso_pu_bacteria 2867428634 2867433285 598
121 iso_pu_bacteria 2919468124 2919472231 598
122 iso_pu_bacteria 2946072368 2946073893 598
123 iso_pu_bacteria 2954380949 2954388678 598
124 iso_pu_bacteria 2954673503 2954674445 598
125 iso_pu_bacteria 2954682443 2954689686 598
126 iso_pu_bacteria 2954691527 2954699469 598
127 iso_pu_bacteria 2954701450 2954702749 598
128 iso_pu_bacteria 2954711539 2954718409 598
129 iso_pu_bacteria 2954721474 2954728379 598
130 iso_pu_bacteria 2954731030 2954733430 598
131 iso_pu_bacteria 2954740390 2954747275 598
132 iso_pu_bacteria 2954749733 2954752313 598
133 iso_pu_bacteria 2954759201 2954766390 598
134 iso_pu_bacteria 8008558824 8008561276 598
135 3300009147 Ga0114129_10000492 Ga0114129_100004924 599
136 3300028786 Ga0307517_10005028 Ga0307517_100050286 599
137 3300030521 Ga0307511_10040277 Ga0307511_100402772 599
138 3300031616 Ga0307508_10008075 Ga0307508_100080758 599
139 3300046522 Ga0495643_0002947 Ga0495643_0002947_10328_12448 599
140 3300047447 Ga0495685_002543 Ga0495685_002543_168_2288 599
141 3300047470 Ga0495681_0002560 Ga0495681_0002560_3579_5699 599
142 3300050509 nmdc:mga0qj67_22_c3 nmdc:mga0qj67_22_c3_46015_48159 599
143 3300053086 Ga0500578_0032080 Ga0500578_0032080_191_2311 599
144 3300053131 Ga0500652_000953 Ga0500652_000953_2812_4932 599
145 3300053134 Ga0500658_0001450 Ga0500658_0001450_7119_9239 599
146 3300053137 Ga0500561_0000346 Ga0500561_0000346_2809_4929 599
147 3300053153 Ga0500616_0023529 Ga0500616_0023529_244_2364 599
148 3300053161 Ga0500634_0015646 Ga0500634_0015646_847_2967 599
149 iso_pu_bacteria 2877676314 2877683433 599
150 3300005530 Ga0070679_100093189 Ga0070679_1000931891 600
151 3300041512 Ga0451853_2547244 Ga0451853_2547244_3313_5454 600
152 3300046683 Ga0495658_0008681 Ga0495658_0008681_1392_3560 600
153 3300015262 Ga0182007_10000683 Ga0182007_1000068313 601
154 3300006048 Ga0075363_100005628 Ga0075363_1000056283 602
155 3300015688 Ga0183367_1017 Ga0183367_101788 602
156 3300050490 nmdc:mga03n38_5617_c1 nmdc:mga03n38_5617_c1_472_2613 602
157 iso_pu_bacteria 2582581314 2585316974 602
158 iso_pu_bacteria 2808606375 2808918351 602
159 3300050507 nmdc:mga05p37_10686_c1 nmdc:mga05p37_10686_c1_1562_3706 603
160 3300050508 nmdc:mga09592_6590_c1 nmdc:mga09592_6590_c1_2725_4869 603
161 3300050510 nmdc:mga06r32_851_c3 nmdc:mga06r32_851_c3_11177_13321 603
162 3300050512 nmdc:mga0n895_38706_c1 nmdc:mga0n895_38706_c1_203_2323 603
163 3300050513 nmdc:mga0rr50_55708_c1 nmdc:mga0rr50_55708_c1_472_2592 603
164 3300053140 Ga0500573_0011240 Ga0500573_0011240_957_3137 603
165 3300030522 Ga0307512_10044459 Ga0307512_100444592 604
166 3300046794 Ga0495589_0024604 Ga0495589_0024604_766_2955 604
167 3300031730 Ga0307516_10056872 Ga0307516_100568722 606
168 iso_pu_bacteria 2808606982 2811846930 606
169 iso_pu_bacteria 2990059506 2990059613 606
170 3300015688 Ga0183367_1014 Ga0183367_101493 607
171 3300031456 Ga0307513_10077979 Ga0307513_100779792 607
172 3300049570 Ga0501033_0033567 Ga0501033_0033567_1125_3317 607
173 3300049823 Ga0501044_0022400 Ga0501044_0022400_2426_4618 607
174 3300006871 Ga0075434_100040472 Ga0075434_1000404725 608
175 3300049569 Ga0501032_0023248 Ga0501032_0023248_880_3120 608
176 3300049571 Ga0501034_0015943 Ga0501034_0015943_1592_3832 608
177 3300049572 Ga0501036_0039259 Ga0501036_0039259_470_2710 608
178 3300049574 Ga0501038_0012985 Ga0501038_0012985_3257_5497 608
179 3300049581 Ga0501047_0014297 Ga0501047_0014297_2494_4734 608
180 3300003203 JGI25406J46586_10008137 JGI25406J46586_100081373 618
181 3300005985 Ga0081539_10000419 Ga0081539_1000041941 618

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03176

MMPL

MMPL family

468

708

0.91

PF12349

Sterol-sensing

Sterol-sensing domain of SREBP cleavage-activation

204

345

0.87

PF03176

MMPL

MMPL family

52

379

0.83

Feature Viewer

pLDDT pTM Quality
57.76 0.46 Low
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map