F277991

General Info

Members Datasets Scaffolds Average Seq Length
181 148 363 312

Family's Representative Sequence

Representative Sequence 3300046674|Ga0495588_0185075|Ga0495588_0185075_52_1080
Length 342
Sequence MWVGKRALHPDDERHATTSTLNMRILLTGSSGWLGRFLSPMLRQAGHEPVGLDVAPGPHTDVVGSVADTPLIRRLFADYRFDAVIHAAALHKPDIARYPRQAFVDVNVTGTLNLLEAAVAYGASRFVFTSTTSLMITRAIRDETAPAAVWLDETSGPLQPRNIYGVTKRTAEELARLCHADHGLPVIVLRTARFFPEDDDTHSTQNRLAGENMKANEFLHRRLAVEDCALAHLAALENAPAIGFGLYVVSAPTPFDRGDAARLKTDAAAVIARCFPDAADLYAARGWTLPATIGRVYDAAAIERDLGFRCRTDFAAVLAALRDGRPLPFAHDPAYTSPMLKS

Samples

Sample ID Description Type Environment
1 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
2 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
3 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
4 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
5 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
6 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
7 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
8 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
9 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
10 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
11 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
12 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
13 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
14 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
15 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
16 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
17 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
18 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
19 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
20 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
21 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
22 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
23 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
24 3300006942 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW Metagenome Nodule
25 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
26 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
27 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
28 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
29 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
30 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
31 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
32 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
33 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
34 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
35 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
36 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
37 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
38 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
39 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
40 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
41 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
42 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
43 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
44 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
45 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
46 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
47 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
48 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
61 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
62 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
63 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
64 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
65 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
66 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
67 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
68 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
69 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
70 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
71 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
72 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
73 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
74 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
75 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
76 3300042115 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_080116_2642 Metagenome Rhizosphere
77 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
78 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
79 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
80 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
81 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
82 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
83 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
84 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
85 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
86 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
87 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
88 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
89 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
90 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
91 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
92 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
93 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
94 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
95 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
96 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
97 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
98 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
99 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
100 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
101 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
102 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
103 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
104 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
105 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
106 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
107 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
108 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
109 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
110 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
111 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
112 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
113 3300053102 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere Metagenome Endosphere
114 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
115 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
116 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
117 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
118 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
119 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
120 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
121 2508501123 Mesorhizobium sp. WSM3626 Isolate Nodule
122 2512875016 Mesorhizobium japonicum R7A Isolate Nodule
123 2513237164 Mesorhizobium loti CJ3sym Isolate Nodule
124 2582581280 Caulobacter henricii CF287 Isolate Rhizosphere
125 2582581293 Caulobacter henricii YR570 Isolate Rhizosphere
126 2643221595 Mesorhizobium sp. Root695 Isolate Unclassified
127 2818991435 Caulobacter henricii 536 Isolate Unclassified
128 2818991454 Caulobacter rhizosphaerae 3260 Isolate Rhizosphere
129 2852653556 Sphingopyxis sp. JAI108 Isolate Rhizosphere
130 2856320880 Mesorhizobium sp. M8A.F.Ca.ET.165.01.1.1 Isolate Nodule
131 2871466892 Mesorhizobium sp. M7D.F.Ca.US.004.01.2.1 Isolate Nodule
132 2874139085 Mesorhizobium sp. M8A.F.Ca.ET.207.01.1.1 Isolate Nodule
133 2878738818 Mesorhizobium sp. M8A.F.Ca.ET.218.01.1.1 Isolate Nodule
134 2888337043 Mesorhizobium sp. M8A.F.Ca.ET.057.01.1.1 Isolate Nodule
135 2924776078 Mesorhizobium sp. M8A.F.Ca.ET.213.01.1.1 Isolate Nodule
136 2937877337 Mesorhizobium sp. M8A.F.Ca.ET.161.01.1.1 Isolate Nodule
137 2937972304 Mesorhizobium sp. M8A.F.Ca.ET.173.01.1.1 Isolate Nodule
138 2958064165 Mesorhizobium sp. SARCC-RB16n Isolate Unclassified
139 2958084443 Mesorhizobium sp. M8A.F.Ca.ET.142.01.1.1 Isolate Nodule
140 2958092219 Mesorhizobium sp. M8A.F.Ca.ET.059.01.1.1 Isolate Nodule
141 2958144490 Mesorhizobium sp. M8A.F.Ca.ET.021.01.1.1 Isolate Nodule
142 2968016561 Mesorhizobium sp. M8A.F.Ca.ET.182.01.1.1 Isolate Nodule
143 2970469710 Mesorhizobium sp. M8A.F.Ca.ET.181.01.1.1 Isolate Nodule
144 2996348954 Mesorhizobium sp. M8A.F.Ca.ET.167.01.1.1 Isolate Nodule
145 3004275668 Mesorhizobium sp. M8A.F.Ca.ET.208.01.1.1 Isolate Nodule
146 3004289098 Mesorhizobium sp. M8A.F.Ca.ET.023.02.2.1 Isolate Nodule
147 3004334049 Mesorhizobium huakuii 583 Isolate Unclassified
148 8056681323 Bradyrhizobium cenepequi CNPSo 4026 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 84.53
Metatranscriptomes 0
Isolates 15.47

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 21.55
Nodule 11.6
Rhizoplane 2.76
Rhizosphere 55.25
Stem 0
Stem Tuber 0
Unclassified 0.55

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495588_0185075 3300046674 Bacteria 1100
2 JGI25150J39212_1001984 3300002774 Bacteria 5350
3 JGI25165J46597_1000041 3300003214 Bacteria 272566
4 JGI25165J46597_1000050 3300003214 Bacteria 242776
5 JGI25153J46596_10000395 3300003215 Bacteria 29365
6 JGI25153J46596_10040630 3300003215 Bacteria 1440
7 rootH1_10029390 3300003316 Bacteria 4608
8 rootH1_10029390 3300003323 Bacteria 24130
9 rootL2_10109571 3300003322 Bacteria 3870
10 rootL2_10109572 3300003322 Bacteria 3320
11 Ga0055542_1000025 3300003762 Bacteria 263538
12 Ga0055542_1000200 3300003762 Bacteria 73349
13 Ga0055529_1000014 3300003763 Bacteria 367283
14 Ga0065165_1000930 3300005262 Bacteria 37471
15 Ga0070676_10163171 3300005328 Bacteria 1436
16 Ga0068869_100188632 3300005334 Bacteria 1620
17 Ga0068869_100214016 3300005334 Bacteria 1525
18 Ga0070662_100343687 3300005457 Bacteria 1221
19 Ga0068867_100150462 3300005459 Bacteria 1828
20 Ga0068853_100390158 3300005539 Bacteria 1302
21 Ga0070665_100030258 3300005548 Bacteria 5449
22 Ga0068856_100002262 3300005614 Bacteria 19874
23 Ga0068856_100272332 3300005614 Bacteria 1709
24 Ga0068864_100004712 3300005618 Bacteria 11179
25 Ga0068858_100000784 3300005842 Bacteria 33220
26 Ga0068860_100000317 3300005843 Bacteria 65673
27 Ga0075364_10053232 3300006051 Bacteria 2646
28 Ga0075366_10100492 3300006195 Bacteria 1735
29 Ga0097621_100189908 3300006237 Bacteria 1779
30 Ga0075434_100009130 3300006871 Bacteria 9237
31 Ga0099824_1004152 3300006942 Bacteria 20960
32 Ga0075435_100018747 3300007076 Bacteria 5271
33 Ga0105240_10008597 3300009093 Bacteria 14592
34 Ga0105240_10145002 3300009093 Bacteria 2834
35 Ga0105245_10004076 3300009098 Bacteria 12973
36 Ga0105243_10119537 3300009148 Bacteria 2219
37 Ga0105238_10055588 3300009551 Bacteria 3972
38 Ga0105238_10323478 3300009551 Bacteria 1528
39 Ga0105239_10761005 3300010375 Bacteria 1109
40 Ga0157370_10000063 3300013104 Bacteria 114697
41 Ga0157374_10231472 3300013296 Bacteria 1815
42 Ga0163162_10631667 3300013306 Bacteria 1195
43 Ga0163161_10013700 3300017792 Bacteria 5646
44 Ga0213872_10001980 3300021361 Bacteria 12472
45 Ga0213872_10015258 3300021361 Bacteria 3575
46 Ga0207427_100298 3300025231 Bacteria 34763
47 Ga0207425_1000041 3300025245 Bacteria 210441
48 Ga0209026_1000652 3300025250 Bacteria 21267
49 Ga0209148_1000011 3300025254 Bacteria 1196503
50 Ga0209129_1004489 3300025258 Bacteria 5421
51 Ga0209233_1000041 3300025261 Bacteria 515463
52 Ga0209233_1000104 3300025261 Bacteria 272675
53 Ga0209455_1000006 3300025272 Bacteria 1196503
54 Ga0209676_1013173 3300025292 Bacteria 3195
55 Ga0209025_1000068 3300025294 Bacteria 294129
56 Ga0209564_1004712 3300025295 Bacteria 8177
57 Ga0209758_1000004 3300025297 Bacteria 1375322
58 Ga0209758_1002654 3300025297 Bacteria 17701
59 Ga0209758_1009129 3300025297 Bacteria 6244
60 Ga0209257_1000036 3300025304 Bacteria 616006
61 Ga0209257_1002353 3300025304 Bacteria 19010
62 Ga0207680_10175556 3300025903 Bacteria 1446
63 Ga0207694_10007561 3300025924 Bacteria 8238
64 Ga0207687_10044826 3300025927 Bacteria 3054
65 Ga0207644_10037827 3300025931 Bacteria 3397
66 Ga0207709_10085521 3300025935 Bacteria 2045
67 Ga0207689_10080354 3300025942 Bacteria 2680
68 Ga0207640_10002493 3300025981 Bacteria 9864
69 Ga0207639_10184454 3300026041 Bacteria 1777
70 Ga0207678_10001628 3300026067 Bacteria 20589
71 Ga0207702_10005207 3300026078 Bacteria 11421
72 Ga0207648_10035867 3300026089 Bacteria 4370
73 Ga0268266_10045354 3300028379 Bacteria 3761
74 Ga0307511_10109102 3300030521 Unclassified 1772
75 Ga0265327_10000360 3300031251 Bacteria 86617
76 Ga0307513_10096390 3300031456 Bacteria 2996
77 Ga0307508_10000231 3300031616 Bacteria 67806
78 Ga0307405_10060798 3300031731 Bacteria 2385
79 Ga0307410_10063477 3300031852 Bacteria 2534
80 Ga0307412_10136468 3300031911 Bacteria 1790
81 Ga0307414_10001551 3300032004 Bacteria 11939
82 Ga0307414_10007842 3300032004 Bacteria 6021
83 Ga0307414_10017130 3300032004 Bacteria 4426
84 Ga0307414_10035485 3300032004 Bacteria 3319
85 Ga0307414_10057192 3300032004 Bacteria 2740
86 Ga0307414_10283484 3300032004 Bacteria 1393
87 Ga0307414_10362037 3300032004 Bacteria 1248
88 Ga0307411_10026862 3300032005 Bacteria 3472
89 Ga0307411_10050432 3300032005 Bacteria 2710
90 Ga0373937_0027587 3300036401 Bacteria 5136
91 Ga0395899_0005543 3300037312 Bacteria 9776
92 Ga0395899_0013914 3300037312 Bacteria 6144
93 Ga0395900_0008726 3300037418 Bacteria 10409
94 Ga0395900_0041743 3300037418 Bacteria 4728
95 Ga0395900_0071041 3300037418 Bacteria 3578
96 Ga0395898_0376216 3300037466 Bacteria 1354
97 Ga0436361_0522309 3300039447 Bacteria 6562
98 Ga0436363_0716914 3300039450 Bacteria 1046
99 Ga0451807_1140693 3300041486 Bacteria 1148
100 Ga0450911_007704 3300042115 Bacteria 1551
101 Ga0439446_0047376 3300042156 Bacteria 1278
102 Ga0466966_0041740 3300044684 Bacteria 2947
103 Ga0466958_0145298 3300045836 Bacteria 1494
104 Ga0495603_0036622 3300046455 Bacteria 2946
105 Ga0495638_0000758 3300046460 Bacteria 34400
106 Ga0495638_0018457 3300046460 Bacteria 4632
107 Ga0495585_0024945 3300046492 Bacteria 3427
108 Ga0495607_0001922 3300046501 Bacteria 17559
109 Ga0495583_0012947 3300046506 Bacteria 4685
110 Ga0495606_0012186 3300046507 Bacteria 6928
111 Ga0495606_0015982 3300046507 Bacteria 5748
112 Ga0495610_0000078 3300046512 Bacteria 116266
113 Ga0495616_0078962 3300046513 Bacteria 1578
114 Ga0495637_0030290 3300046520 Bacteria 2401
115 Ga0495643_0052715 3300046522 Bacteria 2183
116 Ga0495643_0094835 3300046522 Bacteria 1535
117 Ga0495663_0003011 3300046525 Bacteria 4947
118 Ga0495587_0113113 3300046536 Bacteria 1558
119 Ga0495668_0088834 3300046616 Bacteria 1694
120 Ga0495625_0000629 3300046660 Bacteria 51047
121 Ga0495625_0002852 3300046660 Bacteria 18165
122 Ga0495625_0052531 3300046660 Bacteria 2918
123 Ga0495670_0065071 3300046691 Bacteria 1837
124 Ga0495672_0005971 3300047320 Bacteria 9537
125 Ga0495683_0110980 3300047323 Bacteria 1309
126 Ga0495686_0001323 3300047472 Bacteria 27753
127 Ga0495686_0005063 3300047472 Bacteria 10564
128 Ga0496106_0022811 3300048909 Bacteria 4649
129 Ga0496107_0000403 3300048910 Bacteria 23372
130 Ga0496113_0365985 3300048916 Bacteria 1157
131 Ga0496114_0061278 3300048917 Bacteria 3146
132 Ga0496121_0020107 3300048924 Bacteria 6630
133 Ga0496126_0001567 3300048929 Bacteria 35073
134 Ga0496126_0038285 3300048929 Bacteria 4464
135 Ga0496126_0162911 3300048929 Bacteria 1905
136 Ga0495682_0057996 3300049460 Bacteria 1401
137 Ga0501034_0352965 3300049571 Bacteria 1399
138 nmdc:mga00v17_208197_c1 3300050491 Bacteria 1265
139 nmdc:mga0k408_33526_c1 3300050493 Bacteria 2938
140 nmdc:mga0n895_28910_c1 3300050512 Bacteria 5279
141 nmdc:mga0rr50_15971_c1 3300050513 Bacteria 4972
142 Ga0495601_0230407 3300053077 Bacteria 1210
143 Ga0495619_0054786 3300053085 Bacteria 2640
144 Ga0500641_0061538 3300053096 Bacteria 1564
145 Ga0500554_012874 3300053102 Bacteria 2116
146 Ga0500556_0010967 3300053104 Bacteria 2673
147 Ga0500614_010762 3300053123 Bacteria 1969
148 Ga0500658_0012202 3300053134 Bacteria 3166
149 Ga0500559_0046721 3300053136 Bacteria 1899
150 Ga0500559_0151392 3300053136 Bacteria 1089
151 Ga0500577_0000920 3300053142 Bacteria 7626
152 Ga0500616_0040038 3300053153 Bacteria 2523
153 Ga0500616_0049914 3300053153 Bacteria 2212
154 Ga0500645_002512 3300053730 Bacteria 8114
155 2509118114 2508501123 Bacteria 6283661
156 2512931210 2512875016 Bacteria 6529530
157 2514038308 2513237164 Bacteria 7563725
158 2585153018 2582581280 Bacteria 5994497
159 2585195023 2582581293 Bacteria 5907401
160 2643984657 2643221595 Bacteria 6565519
161 2819539906 2818991435 Bacteria 5433759
162 2819649088 2818991454 Bacteria 5563326
163 2852656195 2852653556 Bacteria 4050083
164 2856325527 2856320880 Bacteria 7263508
165 2871472576 2871466892 Bacteria 6923287
166 2874146155 2874139085 Bacteria 7021506
167 2878745509 2878738818 Bacteria 7136951
168 2888339706 2888337043 Bacteria 6629336
169 2924783753 2924776078 Bacteria 7492003
170 2937880479 2937877337 Bacteria 7246526
171 2937975582 2937972304 Bacteria 7532020
172 2958067693 2958064165 Bacteria 7158582
173 2958087613 2958084443 Bacteria 7312792
174 2958099736 2958092219 Bacteria 6861151
175 2958145304 2958144490 Bacteria 6677056
176 2968018160 2968016561 Bacteria 7022047
177 2970471666 2970469710 Bacteria 6969209
178 2996350452 2996348954 Bacteria 7239054
179 3004277150 3004275668 Bacteria 7114440
180 3004293823 3004289098 Bacteria 6135450
181 3004341420 3004334049 Bacteria 8449246
182 8056682824 8056681323 Bacteria 8472857
183 Ga0495588_0185075
184 JGI25150J39212_1001984
185 JGI25165J46597_1000041
186 JGI25165J46597_1000050
187 JGI25153J46596_10000395
188 JGI25153J46596_10040630
189 rootH1_10029390
190 rootL2_10109571
191 rootL2_10109572
192 Ga0055542_1000025
193 Ga0055542_1000200
194 Ga0055529_1000014
195 Ga0065165_1000930
196 Ga0070676_10163171
197 Ga0068869_100188632
198 Ga0068869_100214016
199 Ga0070662_100343687
200 Ga0068867_100150462
201 Ga0068853_100390158
202 Ga0070665_100030258
203 Ga0068856_100002262
204 Ga0068856_100272332
205 Ga0068864_100004712
206 Ga0068858_100000784
207 Ga0068860_100000317
208 Ga0075364_10053232
209 Ga0075366_10100492
210 Ga0097621_100189908
211 Ga0075434_100009130
212 Ga0099824_1004152
213 Ga0075435_100018747
214 Ga0105240_10008597
215 Ga0105240_10145002
216 Ga0105245_10004076
217 Ga0105243_10119537
218 Ga0105238_10055588
219 Ga0105238_10323478
220 Ga0105239_10761005
221 Ga0157370_10000063
222 Ga0157374_10231472
223 Ga0163162_10631667
224 Ga0163161_10013700
225 Ga0213872_10001980
226 Ga0213872_10015258
227 Ga0207427_100298
228 Ga0207425_1000041
229 Ga0209026_1000652
230 Ga0209148_1000011
231 Ga0209129_1004489
232 Ga0209233_1000041
233 Ga0209233_1000104
234 Ga0209455_1000006
235 Ga0209676_1013173
236 Ga0209025_1000068
237 Ga0209564_1004712
238 Ga0209758_1000004
239 Ga0209758_1002654
240 Ga0209758_1009129
241 Ga0209257_1000036
242 Ga0209257_1002353
243 Ga0207680_10175556
244 Ga0207694_10007561
245 Ga0207687_10044826
246 Ga0207644_10037827
247 Ga0207709_10085521
248 Ga0207689_10080354
249 Ga0207640_10002493
250 Ga0207639_10184454
251 Ga0207678_10001628
252 Ga0207702_10005207
253 Ga0207648_10035867
254 Ga0268266_10045354
255 Ga0307511_10109102
256 Ga0265327_10000360
257 Ga0307513_10096390
258 Ga0307508_10000231
259 Ga0307405_10060798
260 Ga0307410_10063477
261 Ga0307412_10136468
262 Ga0307414_10001551
263 Ga0307414_10007842
264 Ga0307414_10017130
265 Ga0307414_10035485
266 Ga0307414_10057192
267 Ga0307414_10283484
268 Ga0307414_10362037
269 Ga0307411_10026862
270 Ga0307411_10050432
271 Ga0373937_0027587
272 Ga0395899_0005543
273 Ga0395899_0013914
274 Ga0395900_0008726
275 Ga0395900_0041743
276 Ga0395900_0071041
277 Ga0395898_0376216
278 Ga0436361_0522309
279 Ga0436363_0716914
280 Ga0451807_1140693
281 Ga0450911_007704
282 Ga0439446_0047376
283 Ga0466966_0041740
284 Ga0466958_0145298
285 Ga0495603_0036622
286 Ga0495638_0000758
287 Ga0495638_0018457
288 Ga0495585_0024945
289 Ga0495607_0001922
290 Ga0495583_0012947
291 Ga0495606_0012186
292 Ga0495606_0015982
293 Ga0495610_0000078
294 Ga0495616_0078962
295 Ga0495637_0030290
296 Ga0495643_0052715
297 Ga0495643_0094835
298 Ga0495663_0003011
299 Ga0495587_0113113
300 Ga0495668_0088834
301 Ga0495625_0000629
302 Ga0495625_0002852
303 Ga0495625_0052531
304 Ga0495670_0065071
305 Ga0495672_0005971
306 Ga0495683_0110980
307 Ga0495686_0001323
308 Ga0495686_0005063
309 Ga0496106_0022811
310 Ga0496107_0000403
311 Ga0496113_0365985
312 Ga0496114_0061278
313 Ga0496121_0020107
314 Ga0496126_0001567
315 Ga0496126_0038285
316 Ga0496126_0162911
317 Ga0495682_0057996
318 Ga0501034_0352965
319 nmdc:mga00v17_208197_c1
320 nmdc:mga0k408_33526_c1
321 nmdc:mga0n895_28910_c1
322 nmdc:mga0rr50_15971_c1
323 Ga0495601_0230407
324 Ga0495619_0054786
325 Ga0500641_0061538
326 Ga0500554_012874
327 Ga0500556_0010967
328 Ga0500614_010762
329 Ga0500658_0012202
330 Ga0500559_0046721
331 Ga0500559_0151392
332 Ga0500577_0000920
333 Ga0500616_0040038
334 Ga0500616_0049914
335 Ga0500645_002512
336 2509118114
337 2512931210
338 2514038308
339 2585153018
340 2585195023
341 2643984657
342 2819539906
343 2819649088
344 2852656195
345 2856325527
346 2871472576
347 2874146155
348 2878745509
349 2888339706
350 2924783753
351 2937880479
352 2937975582
353 2958067693
354 2958087613
355 2958099736
356 2958145304
357 2968018160
358 2970471666
359 2996350452
360 3004277150
361 3004293823
362 3004341420
363 8056682824

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02719

Polysacc_synt_2

Polysaccharide biosynthesis protein

55

144

0.94

PF04321

RmlD_sub_bind

RmlD substrate binding domain

23

222

0.83

PF07993

NAD_binding_4

Male sterility protein

72

215

0.83

PF01370

Epimerase

NAD dependent epimerase/dehydratase family

25

249

0.8

PF16363

GDP_Man_Dehyd

GDP-mannose 4,6 dehydratase

26

202

0.8

PF01073

3Beta_HSD

3-beta hydroxysteroid dehydrogenase/isomerase family

26

240

0.77

Structural Annotation

Top 5 Hits

ID Description Score Start End
4yrb-assembly1.cif.gz_B mouse tdh mutant r180k with nad+ bound 0.8427 2 226
4yrb-assembly1.cif.gz_A mouse tdh mutant r180k with nad+ bound 0.8186 2 226
4yrb-assembly3.cif.gz_E mouse tdh mutant r180k with nad+ bound 0.8179 2 234
4yrb-assembly2.cif.gz_D mouse tdh mutant r180k with nad+ bound 0.8147 2 234
7ys8-assembly1.cif.gz_B crystal structure of udp-glucose 4-epimerase (rv3634c) from mycobacterium tuberculosis 0.81 1 169
ID Description Score Start End Superfamily
af_Q6MWX3_36_334_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8817 1 275 3.40.50.720
1db3A01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.876 2 224 3.40.50.720
3aw9B01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8701 1 224 3.40.50.720
3aw9B01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8615 1 224 3.40.50.720
af_Q4CM81_7_150_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8525 2 112 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A1R3VMN7-F1-model_v4 NAD-dependent epimerase/dehydratase domain-containing protein 0.9898 1 100
AF-A0A175VYQ1-F1-model_v4 UDP-glucose 4-epimerase 0.9257 2 155
AF-A0A532CGR9-F1-model_v4 NAD(P)-dependent oxidoreductase 0.9142 45 231
AF-A0A2V8DPB4-F1-model_v4 NAD-dependent epimerase 0.9126 1 180
AF-A0A1G8Y0W4-F1-model_v4 Adenosine deaminase 0.9107 1 274 GO:0000150
GO:0019239

Map