F277814

General Info

Members Datasets Scaffolds Average Seq Length
181 26 178 126

Family's Representative Sequence

Representative Sequence 3300042876|Ga0451577_0000313|Ga0451577_0000313_89097_89528
Length 143
Sequence MSWNKVFLGRTINRGEIIMTKKAQVYRCDVCGNIVELLHPGEGELVCCGAPMKLLVENTVEASKEKHVPVIEKIAGGFRIKVGSVPHPMEEKHHIEWIEAITADGRISRQFLLPGQAPEALFMIDAEQIIARAYCNLHGLWQA

Samples

Sample ID Description Type Environment
1 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
2 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
3 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
4 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
5 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
6 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
7 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
8 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
9 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
10 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
11 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
12 3300033524 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
13 3300033527 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
14 3300033528 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
15 3300033529 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
16 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
17 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
18 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
19 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
20 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
21 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
22 3300041456 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_5 MetaG Metagenome Rhizoplane
23 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
24 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
25 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
26 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 49.17
Metatranscriptomes 50.83
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.55
Rhizosphere 94.48
Stem 0
Stem Tuber 0
Unclassified 4.97

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0065707_10012336 3300005295 Bacteria 3123
2 Ga0265338_10009235 3300028800 Bacteria 11801
3 Ga0265339_10343193 3300031249 Bacteria 705
4 Ga0316575_10286130 3300031665 Bacteria 695
5 Ga0265342_10540307 3300031712 Bacteria 592
6 Ga0316576_10345960 3300031727 Unclassified 1107
7 Ga0316578_10368991 3300031728 Bacteria 853
8 Ga0316578_10522087 3300031728 Bacteria 699
9 Ga0316577_10044770 3300031733 Unclassified 2475
10 Ga0316577_10386668 3300031733 Bacteria 795
11 Ga0316583_10016439 3300032133 Bacteria 2664
12 Ga0316585_10228801 3300032137 Archaea 615
13 Ga0316593_10002392 3300032168 Bacteria 4431
14 Ga0316593_10007429 3300032168 Bacteria 3012
15 Ga0316593_10017191 3300032168 Bacteria 2203
16 Ga0316593_10020482 3300032168 Bacteria 2057
17 Ga0316593_10022613 3300032168 Bacteria 1977
18 Ga0316593_10027422 3300032168 Bacteria 1828
19 Ga0316593_10031396 3300032168 Bacteria 1731
20 Ga0316593_10035943 3300032168 Bacteria 1631
21 Ga0316593_10038249 3300032168 Bacteria 1588
22 Ga0316593_10040458 3300032168 Bacteria 1549
23 Ga0316593_10042319 3300032168 Unclassified 1519
24 Ga0316593_10043530 3300032168 Bacteria 1500
25 Ga0316593_10053215 3300032168 Unclassified 1371
26 Ga0316593_10058147 3300032168 Bacteria 1318
27 Ga0316593_10065460 3300032168 Bacteria 1249
28 Ga0316593_10068888 3300032168 Bacteria 1221
29 Ga0316593_10074969 3300032168 Bacteria 1174
30 Ga0316593_10107144 3300032168 Bacteria 996
31 Ga0316593_10126679 3300032168 Bacteria 920
32 Ga0316593_10138534 3300032168 Unclassified 881
33 Ga0316593_10221564 3300032168 Bacteria 703
34 Ga0316593_10408327 3300032168 Unclassified 526
35 Ga0316593_10434788 3300032168 Unclassified 510
36 Ga0316593_10450195 3300032168 Unclassified 502
37 Ga0316592_1000910 3300033524 Bacteria 4495
38 Ga0316592_1004134 3300033524 Bacteria 2676
39 Ga0316592_1005264 3300033524 Bacteria 2447
40 Ga0316592_1005435 3300033524 Bacteria 2418
41 Ga0316592_1019756 3300033524 Bacteria 1427
42 Ga0316592_1021310 3300033524 Bacteria 1380
43 Ga0316592_1025755 3300033524 Bacteria 1268
44 Ga0316592_1043982 3300033524 Unclassified 992
45 Ga0316592_1078419 3300033524 Unclassified 750
46 Ga0316592_1080611 3300033524 Bacteria 740
47 Ga0316592_1084633 3300033524 Bacteria 723
48 Ga0316592_1090975 3300033524 Bacteria 698
49 Ga0316592_1172070 3300033524 Unclassified 516
50 Ga0316592_1172235 3300033524 Bacteria 516
51 Ga0316592_1174010 3300033524 Unclassified 513
52 Ga0316586_1011889 3300033527 Bacteria 1341
53 Ga0316586_1018687 3300033527 Unclassified 1126
54 Ga0316586_1073790 3300033527 Unclassified 631
55 Ga0316586_1096657 3300033527 Bacteria 562
56 Ga0316586_1101628 3300033527 Unclassified 550
57 Ga0316586_1115716 3300033527 Unclassified 520
58 Ga0316588_1007417 3300033528 Bacteria 2226
59 Ga0316588_1010249 3300033528 Bacteria 1971
60 Ga0316588_1013246 3300033528 Bacteria 1786
61 Ga0316588_1014995 3300033528 Bacteria 1703
62 Ga0316588_1016026 3300033528 Unclassified 1657
63 Ga0316588_1025247 3300033528 Bacteria 1372
64 Ga0316588_1026857 3300033528 Bacteria 1335
65 Ga0316588_1037077 3300033528 Bacteria 1159
66 Ga0316588_1049337 3300033528 Unclassified 1019
67 Ga0316588_1055016 3300033528 Bacteria 968
68 Ga0316588_1090968 3300033528 Unclassified 760
69 Ga0316588_1100926 3300033528 Unclassified 722
70 Ga0316588_1163507 3300033528 Unclassified 574
71 Ga0316588_1176031 3300033528 Eukaryota 554
72 Ga0316588_1186172 3300033528 Bacteria 540
73 Ga0316588_1201395 3300033528 Unclassified 520
74 Ga0316588_1207580 3300033528 Bacteria 513
75 Ga0316588_1209223 3300033528 Unclassified 511
76 Ga0316588_1212521 3300033528 Unclassified 508
77 Ga0316587_1011816 3300033529 Bacteria 1415
78 Ga0316587_1015688 3300033529 Bacteria 1259
79 Ga0316587_1018906 3300033529 Bacteria 1162
80 Ga0316587_1083884 3300033529 Unclassified 604
81 Ga0316587_1105865 3300033529 Bacteria 544
82 Ga0316587_1109164 3300033529 Unclassified 536
83 Ga0316596_1004763 3300033541 Bacteria 3064
84 Ga0316596_1013476 3300033541 Bacteria 2019
85 Ga0316596_1027321 3300033541 Bacteria 1472
86 Ga0316596_1028020 3300033541 Bacteria 1455
87 Ga0316596_1028052 3300033541 Bacteria 1454
88 Ga0316596_1030529 3300033541 Bacteria 1398
89 Ga0316596_1036822 3300033541 Bacteria 1279
90 Ga0316596_1051027 3300033541 Bacteria 1094
91 Ga0316596_1058500 3300033541 Bacteria 1026
92 Ga0316596_1076385 3300033541 Bacteria 899
93 Ga0316596_1086196 3300033541 Bacteria 845
94 Ga0316596_1089636 3300033541 Bacteria 829
95 Ga0316596_1092619 3300033541 Unclassified 815
96 Ga0316596_1135639 3300033541 Bacteria 673
97 Ga0316596_1157625 3300033541 Bacteria 624
98 Ga0316596_1171386 3300033541 Unclassified 599
99 Ga0316596_1200273 3300033541 Unclassified 555
100 Ga0316596_1229167 3300033541 Bacteria 521
101 Ga0316596_1229513 3300033541 Bacteria 520
102 Ga0316582_0003954 3300036647 Bacteria 7402
103 Ga0316582_0216616 3300036647 Bacteria 1309
104 Ga0316584_0011270 3300036712 Bacteria 6277
105 Ga0316584_0112836 3300036712 Bacteria 2034
106 Ga0316584_0155802 3300036712 Archaea 1699
107 Ga0316584_0192924 3300036712 Bacteria 1505
108 Ga0316584_0231169 3300036712 Bacteria 1355
109 Ga0400484_39454 3300038725 Bacteria 1399
110 Ga0400483_010960 3300039062 Bacteria 7568
111 Ga0400483_071887 3300039062 Unclassified 1114
112 Ga0400483_102068 3300039062 Unclassified 1335
113 Ga0400483_195495 3300039062 Bacteria 1307
114 Ga0400483_214971 3300039062 Unclassified 1164
115 Ga0400483_221043 3300039062 Unclassified 1389
116 Ga0400483_283450 3300039062 Bacteria 5882
117 Ga0400489_02039 3300039093 Bacteria 6950
118 Ga0451795_0172087 3300041456 Unclassified 770
119 Ga0451577_0000313 3300042876 Bacteria 92642
120 Ga0451577_0000324 3300042876 Bacteria 89275
121 Ga0451577_0001083 3300042876 Bacteria 39026
122 Ga0451577_0002852 3300042876 Bacteria 19878
123 Ga0451577_0005091 3300042876 Bacteria 13555
124 Ga0451577_0028308 3300042876 Bacteria 5068
125 Ga0451577_0064175 3300042876 Bacteria 3275
126 Ga0451577_0076655 3300042876 Bacteria 2981
127 Ga0451577_0082569 3300042876 Bacteria 2867
128 Ga0451577_0161255 3300042876 Bacteria 2019
129 Ga0451577_0250959 3300042876 Unclassified 1602
130 Ga0451577_0308038 3300042876 Bacteria 1435
131 Ga0451577_0544959 3300042876 Bacteria 1053
132 Ga0451577_0675557 3300042876 Bacteria 936
133 Ga0451577_1596469 3300042876 Bacteria 575
134 Ga0451577_1666714 3300042876 Bacteria 561
135 Ga0453683_0000001 3300044673 Bacteria 1384965
136 Ga0453683_0000048 3300044673 Bacteria 207480
137 Ga0453683_0000076 3300044673 Bacteria 149358
138 Ga0453683_0000244 3300044673 Bacteria 72720
139 Ga0453683_0001726 3300044673 Bacteria 18115
140 Ga0453683_0009823 3300044673 Bacteria 6376
141 Ga0453683_0157796 3300044673 Bacteria 1435
142 Ga0453683_0362170 3300044673 Bacteria 932
143 Ga0453683_0759657 3300044673 Bacteria 637
144 Ga0453684_0000853 3300044712 Bacteria 102730
145 Ga0453684_0000971 3300044712 Bacteria 94443
146 Ga0453684_0000992 3300044712 Bacteria 92625
147 Ga0453684_0003036 3300044712 Bacteria 39033
148 Ga0453684_0003429 3300044712 Bacteria 35743
149 Ga0453684_0004364 3300044712 Bacteria 30005
150 Ga0453684_0004607 3300044712 Bacteria 28729
151 Ga0453684_0013711 3300044712 Bacteria 13122
152 Ga0453684_0018606 3300044712 Unclassified 10649
153 Ga0453684_0019258 3300044712 Bacteria 10405
154 Ga0453684_0065103 3300044712 Bacteria 4650
155 Ga0453684_0087287 3300044712 Bacteria 3867
156 Ga0453684_0094871 3300044712 Bacteria 3668
157 Ga0453684_0151218 3300044712 Bacteria 2758
158 Ga0453684_0202265 3300044712 Unclassified 2315
159 Ga0453684_0220779 3300044712 Bacteria 2196
160 Ga0453684_0386691 3300044712 Bacteria 1570
161 Ga0453684_0609298 3300044712 Bacteria 1196
162 Ga0453684_1284946 3300044712 Bacteria 764
163 Ga0453684_1314545 3300044712 Bacteria 754
164 Ga0453684_1350980 3300044712 Bacteria 741
165 Ga0451576_0000248 3300045051 Bacteria 132398
166 Ga0451576_0000843 3300045051 Bacteria 59676
167 Ga0451576_0001078 3300045051 Bacteria 50041
168 Ga0451576_0021674 3300045051 Bacteria 6980
169 Ga0451576_0063583 3300045051 Bacteria 3847
170 Ga0451576_0227393 3300045051 Bacteria 1948
171 Ga0451576_0237417 3300045051 Bacteria 1904
172 Ga0451576_0307531 3300045051 Bacteria 1658
173 Ga0451576_0461358 3300045051 Bacteria 1334
174 Ga0451576_0464477 3300045051 Bacteria 1329
175 Ga0451576_0577877 3300045051 Unclassified 1181
176 Ga0451576_0683058 3300045051 Bacteria 1079
177 Ga0451576_0753177 3300045051 Bacteria 1023
178 Ga0451576_1229374 3300045051 Bacteria 782

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300033528 Ga0316588_1201395 Ga0316588_12013952 109
2 3300032168 Ga0316593_10007429 Ga0316593_100074293 115
3 3300044712 Ga0453684_0609298 Ga0453684_0609298_177_551 117
4 3300044712 Ga0453684_0018606 Ga0453684_0018606_1634_1999 121
5 3300031733 Ga0316577_10386668 Ga0316577_103866682 123
6 3300032168 Ga0316593_10107144 Ga0316593_101071441 123
7 3300033528 Ga0316588_1026857 Ga0316588_10268571 123
8 3300028800 Ga0265338_10009235 Ga0265338_1000923511 124
9 3300031727 Ga0316576_10345960 Ga0316576_103459602 124
10 3300031728 Ga0316578_10368991 Ga0316578_103689912 124
11 3300031733 Ga0316577_10044770 Ga0316577_100447702 124
12 3300032133 Ga0316583_10016439 Ga0316583_100164394 124
13 3300032137 Ga0316585_10228801 Ga0316585_102288012 124
14 3300032168 Ga0316593_10002392 Ga0316593_100023928 124
15 3300032168 Ga0316593_10017191 Ga0316593_100171913 124
16 3300032168 Ga0316593_10020482 Ga0316593_100204823 124
17 3300032168 Ga0316593_10022613 Ga0316593_100226132 124
18 3300032168 Ga0316593_10031396 Ga0316593_100313962 124
19 3300032168 Ga0316593_10035943 Ga0316593_100359433 124
20 3300032168 Ga0316593_10038249 Ga0316593_100382491 124
21 3300032168 Ga0316593_10040458 Ga0316593_100404582 124
22 3300032168 Ga0316593_10043530 Ga0316593_100435301 124
23 3300032168 Ga0316593_10053215 Ga0316593_100532152 124
24 3300032168 Ga0316593_10058147 Ga0316593_100581472 124
25 3300032168 Ga0316593_10065460 Ga0316593_100654601 124
26 3300032168 Ga0316593_10065460 Ga0316593_100654603 124
27 3300032168 Ga0316593_10068888 Ga0316593_100688882 124
28 3300032168 Ga0316593_10074969 Ga0316593_100749692 124
29 3300032168 Ga0316593_10126679 Ga0316593_101266791 124
30 3300032168 Ga0316593_10138534 Ga0316593_101385342 124
31 3300032168 Ga0316593_10221564 Ga0316593_102215641 124
32 3300032168 Ga0316593_10434788 Ga0316593_104347881 124
33 3300033524 Ga0316592_1000910 Ga0316592_10009103 124
34 3300033524 Ga0316592_1004134 Ga0316592_10041345 124
35 3300033524 Ga0316592_1005264 Ga0316592_10052644 124
36 3300033524 Ga0316592_1005435 Ga0316592_10054354 124
37 3300033524 Ga0316592_1019756 Ga0316592_10197562 124
38 3300033524 Ga0316592_1021310 Ga0316592_10213101 124
39 3300033524 Ga0316592_1021310 Ga0316592_10213103 124
40 3300033524 Ga0316592_1043982 Ga0316592_10439822 124
41 3300033524 Ga0316592_1078419 Ga0316592_10784191 124
42 3300033524 Ga0316592_1080611 Ga0316592_10806112 124
43 3300033524 Ga0316592_1084633 Ga0316592_10846331 124
44 3300033524 Ga0316592_1090975 Ga0316592_10909751 124
45 3300033527 Ga0316586_1011889 Ga0316586_10118891 124
46 3300033527 Ga0316586_1073790 Ga0316586_10737902 124
47 3300033527 Ga0316586_1096657 Ga0316586_10966571 124
48 3300033527 Ga0316586_1115716 Ga0316586_11157161 124
49 3300033528 Ga0316588_1007417 Ga0316588_10074173 124
50 3300033528 Ga0316588_1010249 Ga0316588_10102493 124
51 3300033528 Ga0316588_1013246 Ga0316588_10132463 124
52 3300033528 Ga0316588_1014995 Ga0316588_10149952 124
53 3300033528 Ga0316588_1016026 Ga0316588_10160263 124
54 3300033528 Ga0316588_1049337 Ga0316588_10493371 124
55 3300033528 Ga0316588_1055016 Ga0316588_10550163 124
56 3300033528 Ga0316588_1090968 Ga0316588_10909682 124
57 3300033528 Ga0316588_1100926 Ga0316588_11009261 124
58 3300033528 Ga0316588_1176031 Ga0316588_11760311 124
59 3300033528 Ga0316588_1186172 Ga0316588_11861721 124
60 3300033528 Ga0316588_1212521 Ga0316588_12125211 124
61 3300033529 Ga0316587_1015688 Ga0316587_10156882 124
62 3300033529 Ga0316587_1018906 Ga0316587_10189063 124
63 3300033529 Ga0316587_1083884 Ga0316587_10838842 124
64 3300033529 Ga0316587_1105865 Ga0316587_11058651 124
65 3300033529 Ga0316587_1109164 Ga0316587_11091641 124
66 3300033541 Ga0316596_1004763 Ga0316596_10047635 124
67 3300033541 Ga0316596_1013476 Ga0316596_10134763 124
68 3300033541 Ga0316596_1027321 Ga0316596_10273212 124
69 3300033541 Ga0316596_1028020 Ga0316596_10280203 124
70 3300033541 Ga0316596_1028052 Ga0316596_10280521 124
71 3300033541 Ga0316596_1036822 Ga0316596_10368221 124
72 3300033541 Ga0316596_1036822 Ga0316596_10368223 124
73 3300033541 Ga0316596_1058500 Ga0316596_10585001 124
74 3300033541 Ga0316596_1076385 Ga0316596_10763851 124
75 3300033541 Ga0316596_1086196 Ga0316596_10861961 124
76 3300033541 Ga0316596_1089636 Ga0316596_10896361 124
77 3300033541 Ga0316596_1092619 Ga0316596_10926192 124
78 3300033541 Ga0316596_1135639 Ga0316596_11356392 124
79 3300033541 Ga0316596_1157625 Ga0316596_11576252 124
80 3300033541 Ga0316596_1171386 Ga0316596_11713862 124
81 3300033541 Ga0316596_1229513 Ga0316596_12295131 124
82 3300036647 Ga0316582_0003954 Ga0316582_0003954_5722_6102 124
83 3300036712 Ga0316584_0011270 Ga0316584_0011270_1181_1558 124
84 3300036712 Ga0316584_0112836 Ga0316584_0112836_1289_1663 124
85 3300036712 Ga0316584_0155802 Ga0316584_0155802_1280_1657 124
86 3300036712 Ga0316584_0192924 Ga0316584_0192924_410_784 124
87 3300036712 Ga0316584_0231169 Ga0316584_0231169_797_1189 124
88 3300039062 Ga0400483_010960 Ga0400483_010960_5045_5419 124
89 3300039062 Ga0400483_071887 Ga0400483_071887_417_791 124
90 3300039062 Ga0400483_102068 Ga0400483_102068_646_1023 124
91 3300039062 Ga0400483_195495 Ga0400483_195495_615_989 124
92 3300039062 Ga0400483_214971 Ga0400483_214971_414_788 124
93 3300039062 Ga0400483_221043 Ga0400483_221043_444_821 124
94 3300039062 Ga0400483_283450 Ga0400483_283450_3111_3485 124
95 3300041456 Ga0451795_0172087 Ga0451795_0172087_173_553 124
96 3300042876 Ga0451577_0000313 Ga0451577_0000313_89097_89528 124
97 3300042876 Ga0451577_0005091 Ga0451577_0005091_2735_3109 124
98 3300042876 Ga0451577_0250959 Ga0451577_0250959_1078_1467 124
99 3300044712 Ga0453684_0000992 Ga0453684_0000992_3098_3529 124
100 3300044712 Ga0453684_0004364 Ga0453684_0004364_4967_5341 124
101 3300044712 Ga0453684_0004607 Ga0453684_0004607_771_1148 124
102 3300044712 Ga0453684_0013711 Ga0453684_0013711_10333_10797 124
103 3300044712 Ga0453684_0065103 Ga0453684_0065103_1163_1579 124
104 3300045051 Ga0451576_0577877 Ga0451576_0577877_428_802 124
105 3300045051 Ga0451576_1229374 Ga0451576_1229374_166_540 124
106 3300031665 Ga0316575_10286130 Ga0316575_102861301 125
107 3300031712 Ga0265342_10540307 Ga0265342_105403072 125
108 3300031728 Ga0316578_10522087 Ga0316578_105220871 125
109 3300032168 Ga0316593_10042319 Ga0316593_100423193 125
110 3300032168 Ga0316593_10408327 Ga0316593_104083271 125
111 3300032168 Ga0316593_10450195 Ga0316593_104501951 125
112 3300033524 Ga0316592_1025755 Ga0316592_10257552 125
113 3300033524 Ga0316592_1172070 Ga0316592_11720701 125
114 3300033524 Ga0316592_1172235 Ga0316592_11722351 125
115 3300033524 Ga0316592_1174010 Ga0316592_11740101 125
116 3300033527 Ga0316586_1018687 Ga0316586_10186872 125
117 3300033527 Ga0316586_1101628 Ga0316586_11016281 125
118 3300033528 Ga0316588_1025247 Ga0316588_10252472 125
119 3300033528 Ga0316588_1037077 Ga0316588_10370772 125
120 3300033528 Ga0316588_1163507 Ga0316588_11635071 125
121 3300033528 Ga0316588_1207580 Ga0316588_12075801 125
122 3300033528 Ga0316588_1209223 Ga0316588_12092231 125
123 3300033541 Ga0316596_1051027 Ga0316596_10510271 125
124 3300033541 Ga0316596_1200273 Ga0316596_12002731 125
125 3300033541 Ga0316596_1229167 Ga0316596_12291672 125
126 3300036647 Ga0316582_0216616 Ga0316582_0216616_909_1286 125
127 3300038725 Ga0400484_39454 Ga0400484_39454_468_848 125
128 3300039093 Ga0400489_02039 Ga0400489_02039_253_630 125
129 3300005295 Ga0065707_10012336 Ga0065707_100123362 126
130 3300031249 Ga0265339_10343193 Ga0265339_103431932 126
131 3300032168 Ga0316593_10027422 Ga0316593_100274222 126
132 3300033529 Ga0316587_1011816 Ga0316587_10118162 126
133 3300033541 Ga0316596_1030529 Ga0316596_10305292 126
134 3300042876 Ga0451577_0000324 Ga0451577_0000324_53495_53875 126
135 3300042876 Ga0451577_0001083 Ga0451577_0001083_9273_9653 126
136 3300042876 Ga0451577_0002852 Ga0451577_0002852_17146_17526 126
137 3300042876 Ga0451577_0028308 Ga0451577_0028308_2871_3251 126
138 3300042876 Ga0451577_0064175 Ga0451577_0064175_2429_2809 126
139 3300042876 Ga0451577_0076655 Ga0451577_0076655_1648_2028 126
140 3300042876 Ga0451577_0082569 Ga0451577_0082569_1490_1891 126
141 3300042876 Ga0451577_0161255 Ga0451577_0161255_1536_1916 126
142 3300042876 Ga0451577_0308038 Ga0451577_0308038_782_1162 126
143 3300042876 Ga0451577_0544959 Ga0451577_0544959_21_401 126
144 3300042876 Ga0451577_0675557 Ga0451577_0675557_224_622 126
145 3300042876 Ga0451577_1596469 Ga0451577_1596469_23_403 126
146 3300042876 Ga0451577_1666714 Ga0451577_1666714_12_392 126
147 3300044673 Ga0453683_0000001 Ga0453683_0000001_800022_800402 126
148 3300044673 Ga0453683_0000048 Ga0453683_0000048_123729_124109 126
149 3300044673 Ga0453683_0000076 Ga0453683_0000076_42344_42724 126
150 3300044673 Ga0453683_0000244 Ga0453683_0000244_30137_30595 126
151 3300044673 Ga0453683_0001726 Ga0453683_0001726_15182_15562 126
152 3300044673 Ga0453683_0009823 Ga0453683_0009823_2295_2696 126
153 3300044673 Ga0453683_0157796 Ga0453683_0157796_396_776 126
154 3300044673 Ga0453683_0362170 Ga0453683_0362170_280_660 126
155 3300044673 Ga0453683_0759657 Ga0453683_0759657_210_590 126
156 3300044712 Ga0453684_0000853 Ga0453684_0000853_49403_49783 126
157 3300044712 Ga0453684_0000971 Ga0453684_0000971_28771_29172 126
158 3300044712 Ga0453684_0003036 Ga0453684_0003036_35459_35839 126
159 3300044712 Ga0453684_0003429 Ga0453684_0003429_32988_33368 126
160 3300044712 Ga0453684_0019258 Ga0453684_0019258_7439_7819 126
161 3300044712 Ga0453684_0087287 Ga0453684_0087287_1774_2154 126
162 3300044712 Ga0453684_0094871 Ga0453684_0094871_697_1077 126
163 3300044712 Ga0453684_0151218 Ga0453684_0151218_1641_2021 126
164 3300044712 Ga0453684_0202265 Ga0453684_0202265_529_909 126
165 3300044712 Ga0453684_0220779 Ga0453684_0220779_755_1135 126
166 3300044712 Ga0453684_0386691 Ga0453684_0386691_1026_1406 126
167 3300044712 Ga0453684_1284946 Ga0453684_1284946_98_478 126
168 3300044712 Ga0453684_1314545 Ga0453684_1314545_30_410 126
169 3300044712 Ga0453684_1350980 Ga0453684_1350980_331_711 126
170 3300045051 Ga0451576_0000248 Ga0451576_0000248_75303_75683 126
171 3300045051 Ga0451576_0000843 Ga0451576_0000843_3856_4257 126
172 3300045051 Ga0451576_0001078 Ga0451576_0001078_1525_1905 126
173 3300045051 Ga0451576_0021674 Ga0451576_0021674_5747_6127 126
174 3300045051 Ga0451576_0063583 Ga0451576_0063583_2827_3207 126
175 3300045051 Ga0451576_0227393 Ga0451576_0227393_227_607 126
176 3300045051 Ga0451576_0237417 Ga0451576_0237417_723_1103 126
177 3300045051 Ga0451576_0307531 Ga0451576_0307531_779_1159 126
178 3300045051 Ga0451576_0461358 Ga0451576_0461358_328_708 126
179 3300045051 Ga0451576_0464477 Ga0451576_0464477_717_1097 126
180 3300045051 Ga0451576_0683058 Ga0451576_0683058_664_1044 126
181 3300045051 Ga0451576_0753177 Ga0451576_0753177_52_432 126

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF06397

Desulfoferrod_N

Desulfoferrodoxin, N-terminal domain

20

55

0.97

PF01880

Desulfoferrodox

Desulfoferrodoxin

59

143

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
1dxg-assembly1.cif.gz_B crystal structure of desulforedoxin from desulfovibrio gigas at 1.8 a resolution 0.9895 5 36
1dcd-assembly1.cif.gz_B desulforedoxin complexed with cd2+ 0.9872 2 36
1dcd-assembly1.cif.gz_A desulforedoxin complexed with cd2+ 0.9845 2 36
1dhg-assembly1.cif.gz_A hg-substituted desulforedoxin 0.9836 2 36
1cfw-assembly1.cif.gz_A ga-substituted desulforedoxin 0.9797 2 36
ID Description Score Start End Superfamily
2ji2C01 Mainly Beta;Single Sheet;Rubrerythrin, domain 2;Desulphoferrodoxin, N-terminal domain 0.9631 1 39 2.20.28.100
2ji3C01 Mainly Beta;Single Sheet;Rubrerythrin, domain 2;Desulphoferrodoxin, N-terminal domain 0.9613 1 39 2.20.28.100
1dfxA00 Mainly Beta;Sandwich;Immunoglobulin-like;SOR catalytic domain 0.9561 5 126 2.60.40.730
1vzgB01 Mainly Beta;Single Sheet;Rubrerythrin, domain 2;Desulphoferrodoxin, N-terminal domain 0.9517 5 39 2.20.28.100
1vzgA02 Mainly Beta;Sandwich;Immunoglobulin-like;SOR catalytic domain 0.9482 40 126 2.60.40.730
ID Description Score Start End GO Terms
AF-A0A660TTP0-F1-model_v4 Desulfoferrodoxin 0.9936 1 40 GO:0005506
AF-A0A7X6TMY5-F1-model_v4 Desulfoferrodoxin (EC 1.15.1.2) (Superoxide reductase) 0.9743 6 126 GO:0005506
GO:0016020
GO:0016491
AF-A0A2U1S7N7-F1-model_v4 Desulfoferrodoxin (EC 1.15.1.2) 0.9737 1 124 GO:0005506
GO:0019430
GO:0050605
AF-A0A7V6SWZ3-F1-model_v4 Desulfoferrodoxin (EC 1.15.1.2) (Superoxide reductase) 0.9728 6 126 GO:0005506
GO:0016491
GO:0019430
AF-A0A7V5N2I2-F1-model_v4 Desulfoferrodoxin FeS4 iron-binding domain-containing protein 0.9715 1 36 GO:0005506

Feature Viewer

pLDDT pTM Quality
93.07 0.87 High
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Predicted Structure (AlphaFold2)

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